Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017046.1

Orthogroup ID

OG0007990

Physical Location & Seq

Genomic Coordinates Reverse (-)

39226 .. 42070

Gene Structure 2845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017046.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

atgggaaggaagaagcccaaggacccagaaagcgacgccgtttcgggtcaacccgacatattcaagaccctattcggcgacgccgccacccaggacgccgcccccgccatcttctccgacgacaaccccttcaggaggaagaaccaggaaccagggtcagggtttgccgctgctccgtcgctcgaaaccgtcggaaacgtcaaccacggcggctccgaggacaaggacgctggcaatggtgaggtgaggaagaagaggaagaagaaggcgatggattcggctgctgaagaagaagaagaagaagaagcttcagaggaggctgcattagagagcaagaagccgaagaaatcgaagaaggaaaaacccaatttggaaaaccctaatttgggttctgaaagcaaagaaaatgatgtggtgtccaatttggttttgggtttgggatcgaatgccgagaatgatccgaatttgggtctgagtgtggtgaagaagaagaggaaaagggatgagcttgagagggaatacgaagcaaagaagtacggcgtgacagagaaccaggaggatggagatttggggaagaaagttgtgggggaaaagaggaaggcggtggacaatccagctgatatgctggtttcagaggaaggtttcgacgacgaaagtaagcttctgaggactattttcgttgggaatttaccggtgaaggtgaagaagaaggtgttgatcagggagttcagtaagtttggagaggtggagtctgtgaggattcggtccgtgccgatagaggatacgaaagcgcccagaaaagtagcagtgcttacaaagaaactccataagaaagctgacagcgtgaatgcatacatcgttttcaagtcagaggaatctgcgcaggcttctctgtcccataacatggctgtggttgaagaacatcacatccgtgttgacagggcatgcccacctcgtaagaagctgaaaggggagaacgcttctgtttatgatcacacgagaactgtatttgtgggcaaccttccctttgaagtaaaggatgaagaagtttatcagttgttttgtggcactaacaatcaggattccggagttgaagccattcgcataatcagggattctaatgttggtctcggaaagggcattgcttatgttctgtttaaaacaaaggaagctgcaaatgcagtcgttaggaaacgaaatctgaagcttcgaaatcgggaactcaggctttctcatgcaaaaccagagtccacccaatctaagagcaaaaaccaagattccaccccatctaagagaagcaatccatcacctgcatcaaataccaagtccccagctaaaaggccagcagtcggttcaaggactccagagtttaagggaaattccaaggctactatgtcctaccagggtgtacgtgcaggtaaaaatggtgtccaaaagtatccaaaagctaagtttgaatcaaggcctcagagtggagtgaagccgaaagaacgtacagagaaaagaccttctgttgctgccagaaaagctaaggcggcattccaaggtggtgctgcttcaaaagaagcaggtgtgaagcgtaagatggatagtcgaactccagagagctcccaccagaaaaagaaattcaagaaatttaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

547

Amino Acids

60.35

Weight (kDa)

9.73

Isoelectric Point (pI)

45.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46840 AT5G46840
fragaria_vesca	FvH4_5g22460
malus_domestica	MD06G1037000.v1.1 MD16G1272400.v1.1
prunus_persica	Prupe.5G032300_v2.0.a1
pyrus_communis	pycom06g03030 pycom16g24140
rosa_chinensis	RchiOBHm_Chr7g0210251
rosa_laevigata	RLG00000003055
rosa_multiflora	Rmu_co8157162.1_g000001 Rmu_sc0017046.1_g000009 Rmu_sc0018755.1_g000001 Rmu_sc0019437.1_g000002 Rmu_sc0032647.1_g000001
rosa_roxburghii	Rroxscaffold_3G00248520
rosa_rugosa	Rorug07G0120000
rosa_samantha	Rh7AG252900 Rh7BG248000 Rh7CG269900 Rh7DG260500
rosa_wichuraiana	Rw7G021510 Rw7G021530 Rw7G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1318, 1559
Acc16I	TGCGCA	1 cut(s)	882
Acc36I	ACCTGC	3 cut(s)	1318, 1406, 1559
AccB7I	CCANNNNNTGG	1 cut(s)	904
AccIII	TCCGGA	1 cut(s)	1085
AciI	CCGC	7 cut(s)	84, 99, 105, 168, 210, 602, 1535
AclWI	GGATC	2 cut(s)	448, 452
AcsI	RAATTY	5 cut(s)	463, 685, 1378, 1625, 1634
AcuI	CTGAAG	4 cut(s)	115, 294, 306, 1223
AcyI	GRCGYC	3 cut(s)	36, 81, 96
AfaI	GTAC	3 cut(s)	536, 1410, 1495
AfiI	CCNNNNNNNGG	8 cut(s)	135, 158, 385, 386, 467, 904, 1349, 1472
AgeI	ACCGGT	1 cut(s)	691
AgsI	TTSAA	9 cut(s)	64, 865, 917, 1031, 1094, 1356, 1457, 1560, 1630
AjnI	CCWGG	5 cut(s)	90, 144, 151, 552, 1401
AleI	CACNNNNGTG	1 cut(s)	930
AloI	GAACNNNNNNTCC	2 cut(s)	912, 944
Alw21I	GWGCWC	1 cut(s)	1610
Alw26I	GTCTC	1 cut(s)	1133
AlwI	GGATC	2 cut(s)	448, 452
Aor13HI	TCCGGA	1 cut(s)	1085
AoxI	GGCC	2 cut(s)	1340, 1463
ApeKI	GCWGC	6 cut(s)	170, 281, 320, 1172, 1517, 1553
ApoI	RAATTY	5 cut(s)	463, 685, 1378, 1625, 1634
ArsI	GACNNNNNNTTYG	4 cut(s)	1232, 1264, 1310, 1342
AsiGI	ACCGGT	1 cut(s)	691
Asp700I	GAANNNNTTC	1 cut(s)	1098
AspLEI	GCGC	2 cut(s)	793, 883
AspS9I	GGNCC	2 cut(s)	22, 765
AsuHPI	GGTGA	6 cut(s)	251, 256, 493, 706, 712, 1299
AsuII	TTCGAA	1 cut(s)	1210
AvaII	GGWCC	2 cut(s)	22, 765
BanII	GRGCYC	1 cut(s)	1610
BauI	CACGAG	1 cut(s)	997
Bbv12I	GWGCWC	1 cut(s)	1610
BbvI	GCAGC	6 cut(s)	157, 268, 307, 1159, 1504, 1540
BccI	CCATC	6 cut(s)	116, 265, 554, 1294, 1312, 1579
BceAI	ACGGC	3 cut(s)	23, 223, 553
BciT130I	CCWGG	5 cut(s)	92, 146, 153, 554, 1403
BciVI	GTATCC	2 cut(s)	775, 1449
BclI	TGATCA	2 cut(s)	717, 991
BcoDI	GTCTC	1 cut(s)	1133
BfoI	RGCGCY	1 cut(s)	794
BfuAI	ACCTGC	3 cut(s)	1318, 1406, 1559
BfuI	GTATCC	2 cut(s)	775, 1449
Bme1390I	CCNGG	5 cut(s)	92, 146, 153, 554, 1403
Bme18I	GGWCC	2 cut(s)	22, 765
BmgT120I	GGNCC	2 cut(s)	22, 765
BmiI	GGNNCC	3 cut(s)	24, 150, 214
BmrFI	CCNGG	5 cut(s)	92, 146, 153, 554, 1403
BmsI	GCATC	1 cut(s)	1322
BpmI	CTGGAG	2 cut(s)	1347, 1584
Bpu10I	CCTNAGC	1 cut(s)	1530
Bpu14I	TTCGAA	1 cut(s)	1210
BpuEI	CTTGAG	1 cut(s)	530
BsaAI	YACGTR	1 cut(s)	1412
BsaHI	GRCGYC	3 cut(s)	36, 81, 96
BsaI	GGTCTC	1 cut(s)	1133
BsaJI	CCNNGG	8 cut(s)	18, 90, 152, 205, 216, 1383, 1402, 1543
BsaWI	WCCGGW	2 cut(s)	691, 1085
BsaXI	ACNNNNNCTCC	2 cut(s)	197, 227
Bsc4I	CCNNNNNNNGG	8 cut(s)	135, 158, 385, 386, 467, 904, 1349, 1472
Bse118I	RCCGGY	1 cut(s)	691
Bse3DI	GCAATG	2 cut(s)	241, 1140
BseAI	TCCGGA	1 cut(s)	1085
BseBI	CCWGG	5 cut(s)	92, 146, 153, 554, 1403
BseDI	CCNNGG	8 cut(s)	18, 90, 152, 205, 216, 1383, 1402, 1543
BseGI	GGATG	4 cut(s)	508, 565, 927, 1045
BseLI	CCNNNNNNNGG	8 cut(s)	135, 158, 385, 386, 467, 904, 1349, 1472
BseMI	GCAATG	2 cut(s)	241, 1140
BseMII	CTCAG	4 cut(s)	464, 656, 1237, 1481
BseRI	GAGGAG	1 cut(s)	329
BseXI	GCAGC	6 cut(s)	157, 268, 307, 1159, 1504, 1540
BseYI	CCCAGC	1 cut(s)	1330
BsgI	GTGCAG	1 cut(s)	1434
BshFI	GGCC	2 cut(s)	1342, 1465
BshTI	ACCGGT	1 cut(s)	691
BsiHKAI	GWGCWC	1 cut(s)	1610
BsiSI	CCGG	2 cut(s)	692, 1086
BslFI	GGGAC	2 cut(s)	880, 1312
BslI	CCNNNNNNNGG	8 cut(s)	135, 158, 385, 386, 467, 904, 1349, 1472
BsmAI	GTCTC	1 cut(s)	1133
BsmFI	GGGAC	2 cut(s)	880, 1312
BsmI	GAATGC	3 cut(s)	451, 853, 1538
BsnI	GGCC	2 cut(s)	1342, 1465
Bso31I	GGTCTC	1 cut(s)	1133
Bsp119I	TTCGAA	1 cut(s)	1210
Bsp1286I	GDGCHC	1 cut(s)	1610
Bsp13I	TCCGGA	1 cut(s)	1085
Bsp143I	GATC	4 cut(s)	440, 457, 717, 991
BspACI	CCGC	7 cut(s)	84, 99, 105, 168, 210, 602, 1535
BspANI	GGCC	2 cut(s)	1342, 1465
BspCNI	CTCAG	4 cut(s)	465, 657, 1236, 1480
BspEI	TCCGGA	1 cut(s)	1085
BspLI	GGNNCC	3 cut(s)	24, 150, 214
BspMI	ACCTGC	3 cut(s)	1318, 1406, 1559
BspPI	GGATC	2 cut(s)	448, 452
BspT104I	TTCGAA	1 cut(s)	1210
BspTNI	GGTCTC	1 cut(s)	1133
BsrDI	GCAATG	2 cut(s)	241, 1140
BsrFI	RCCGGY	1 cut(s)	691
BssAI	RCCGGY	1 cut(s)	691
BssECI	CCNNGG	8 cut(s)	18, 90, 152, 205, 216, 1383, 1402, 1543
BssMI	GATC	4 cut(s)	440, 457, 717, 991
BssNI	GRCGYC	3 cut(s)	36, 81, 96
BssSI	CACGAG	1 cut(s)	997
BssT1I	CCWWGG	3 cut(s)	18, 1383, 1543
Bst2BI	CACGAG	1 cut(s)	997
Bst2UI	CCWGG	5 cut(s)	92, 146, 153, 554, 1403
Bst4CI	ACNGT	2 cut(s)	190, 1006
Bst6I	CTCTTC	2 cut(s)	248, 485
BstACI	GRCGYC	3 cut(s)	36, 81, 96
BstBAI	YACGTR	1 cut(s)	1412
BstBI	TTCGAA	1 cut(s)	1210
BstC8I	GCNNGC	4 cut(s)	232, 885, 946, 1344
BstDEI	CTNAG	8 cut(s)	473, 665, 1223, 1260, 1290, 1449, 1467, 1530
BstDSI	CCRYGG	1 cut(s)	205
BstENI	CCTNNNNNAGG	1 cut(s)	133
BstF5I	GGATG	4 cut(s)	508, 565, 927, 1045
BstH2I	RGCGCY	1 cut(s)	794
BstHHI	GCGC	2 cut(s)	793, 883
BstKTI	GATC	4 cut(s)	443, 460, 720, 994
BstMAI	GTCTC	1 cut(s)	1133
BstMBI	GATC	4 cut(s)	440, 457, 717, 991
BstMWI	GCNNNNNNNGC	4 cut(s)	104, 1178, 1526, 1535
BstNI	CCWGG	5 cut(s)	92, 146, 153, 554, 1403
BstNSI	RCATGY	1 cut(s)	948
BstSCI	CCNGG	5 cut(s)	90, 144, 151, 552, 1401
BstV1I	GCAGC	6 cut(s)	157, 268, 307, 1159, 1504, 1540
BstXI	CCANNNNNNTGG	1 cut(s)	560
BsuI	GTATCC	2 cut(s)	775, 1449
BsuRI	GGCC	2 cut(s)	1342, 1465
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	284
BtsCI	GGATG	4 cut(s)	508, 565, 927, 1045
BtsI	GCAGTG	1 cut(s)	813
BtsIMutI	CAGTG	1 cut(s)	813
BveI	ACCTGC	3 cut(s)	1318, 1406, 1559
Cac8I	GCNNGC	4 cut(s)	232, 885, 946, 1344
CfoI	GCGC	2 cut(s)	793, 883
Cfr10I	RCCGGY	1 cut(s)	691
Cfr13I	GGNCC	2 cut(s)	22, 765
CpoI	CGGWCCG	1 cut(s)	765
CseI	GACGC	4 cut(s)	44, 89, 104, 236
Csp6I	GTAC	3 cut(s)	535, 1409, 1494
CspAI	ACCGGT	1 cut(s)	691
CspI	CGGWCCG	1 cut(s)	765
CviAII	CATG	3 cut(s)	904, 945, 1235
CviQI	GTAC	3 cut(s)	535, 1409, 1494
DdeI	CTNAG	8 cut(s)	473, 665, 1223, 1260, 1290, 1449, 1467, 1530
DpnI	GATC	4 cut(s)	442, 459, 719, 993
DpnII	GATC	4 cut(s)	440, 457, 717, 991
DraI	TTTAAA	1 cut(s)	1159
Eam1104I	CTCTTC	2 cut(s)	248, 485
EarI	CTCTTC	2 cut(s)	248, 485
Ecl136II	GAGCTC	1 cut(s)	1608
Eco130I	CCWWGG	3 cut(s)	18, 1383, 1543
Eco147I	AGGCCT	1 cut(s)	1465
Eco24I	GRGCYC	1 cut(s)	1610
Eco31I	GGTCTC	1 cut(s)	1133
Eco47I	GGWCC	2 cut(s)	22, 765
Eco53kI	GAGCTC	1 cut(s)	1608
Eco57I	CTGAAG	4 cut(s)	115, 294, 306, 1223
EcoICRI	GAGCTC	1 cut(s)	1608
EcoNI	CCTNNNNNAGG	1 cut(s)	133
EcoO109I	RGGNCCY	1 cut(s)	22
EcoRII	CCWGG	5 cut(s)	90, 144, 151, 552, 1401
EcoT14I	CCWWGG	3 cut(s)	18, 1383, 1543
EcoT22I	ATGCAT	1 cut(s)	853
EcoT38I	GRGCYC	1 cut(s)	1610
ErhI	CCWWGG	3 cut(s)	18, 1383, 1543
FaeI	CATG	3 cut(s)	907, 948, 1238
FaqI	GGGAC	2 cut(s)	880, 1312
FatI	CATG	3 cut(s)	903, 944, 1234
FauI	CCCGC	1 cut(s)	112
FbaI	TGATCA	2 cut(s)	717, 991
FokI	GGATG	4 cut(s)	515, 572, 914, 1052
FriOI	GRGCYC	1 cut(s)	1610
FspI	TGCGCA	1 cut(s)	882
GlaI	GCGC	2 cut(s)	792, 882
GsaI	CCCAGC	1 cut(s)	1334
GsuI	CTGGAG	2 cut(s)	1347, 1584
HaeII	RGCGCY	1 cut(s)	794
HaeIII	GGCC	2 cut(s)	1342, 1465
HapII	CCGG	2 cut(s)	692, 1086
HgaI	GACGC	4 cut(s)	44, 89, 104, 236
HhaI	GCGC	2 cut(s)	793, 883
Hin1I	GRCGYC	3 cut(s)	36, 81, 96
Hin1II	CATG	3 cut(s)	907, 948, 1238
Hin6I	GCGC	2 cut(s)	791, 881
HinP1I	GCGC	2 cut(s)	791, 881
HincII	GTYRAC	3 cut(s)	50, 202, 937
HindII	GTYRAC	3 cut(s)	50, 202, 937
HindIII	AAGCTT	3 cut(s)	306, 659, 1205
HpaII	CCGG	2 cut(s)	692, 1086
HphI	GGTGA	6 cut(s)	251, 256, 493, 706, 712, 1299
Hpy166II	GTNNAC	6 cut(s)	50, 202, 607, 937, 1251, 1409
Hpy188III	TCNNGA	8 cut(s)	64, 133, 1079, 1086, 1217, 1364, 1601, 1630
Hpy8I	GTNNAC	6 cut(s)	50, 202, 607, 937, 1251, 1409
Hpy99I	CGWCG	7 cut(s)	38, 83, 122, 181, 194, 650, 653
HpyAV	CCTTC	9 cut(s)	139, 259, 349, 592, 632, 691, 703, 1031, 1518
HpyCH4III	ACNGT	2 cut(s)	190, 1006
HpyCH4IV	ACGT	3 cut(s)	198, 1411, 1492
HpyCH4V	TGCA	7 cut(s)	323, 851, 1175, 1181, 1238, 1313, 1415
HpyF10VI	GCNNNNNNNGC	4 cut(s)	104, 1178, 1526, 1535
HpyF3I	CTNAG	8 cut(s)	473, 665, 1223, 1260, 1290, 1449, 1467, 1530
HpySE526I	ACGT	3 cut(s)	198, 1411, 1492
Hsp92I	GRCGYC	3 cut(s)	36, 81, 96
Hsp92II	CATG	3 cut(s)	907, 948, 1238
HspAI	GCGC	2 cut(s)	791, 881
Kpn2I	TCCGGA	1 cut(s)	1085
Ksp22I	TGATCA	2 cut(s)	717, 991
Kzo9I	GATC	4 cut(s)	440, 457, 717, 991
LmnI	GCTCC	3 cut(s)	178, 218, 1613
Lsp1109I	GCAGC	6 cut(s)	157, 268, 307, 1159, 1504, 1540
LweI	GCATC	1 cut(s)	1322
MaeII	ACGT	3 cut(s)	198, 1411, 1492
MaeIII	GTNAC	1 cut(s)	541
MalI	GATC	4 cut(s)	442, 459, 719, 993
MboI	GATC	4 cut(s)	440, 457, 717, 991
MhlI	GDGCHC	1 cut(s)	1610
MluCI	AATT	8 cut(s)	367, 382, 421, 463, 685, 1378, 1625, 1634
MlyI	GAGTC	3 cut(s)	758, 1256, 1354
MmeI	TCCRAC	2 cut(s)	141, 172
Mph1103I	ATGCAT	1 cut(s)	853
MroI	TCCGGA	1 cut(s)	1085
MroXI	GAANNNNTTC	1 cut(s)	1098
MseI	TTAA	2 cut(s)	1158, 1371
MslI	CAYNNNNRTG	2 cut(s)	908, 930
MspA1I	CMGCKG	2 cut(s)	170, 617
MspI	CCGG	2 cut(s)	692, 1086
MspR9I	CCNGG	5 cut(s)	92, 146, 153, 554, 1403
Mva1269I	GAATGC	3 cut(s)	451, 853, 1538
MvaI	CCWGG	5 cut(s)	92, 146, 153, 554, 1403
MwoI	GCNNNNNNNGC	4 cut(s)	104, 1178, 1526, 1535
NdeII	GATC	4 cut(s)	440, 457, 717, 991
NlaIII	CATG	3 cut(s)	907, 948, 1238
NlaIV	GGNNCC	3 cut(s)	24, 150, 214
NmeAIII	GCCGAG	1 cut(s)	475
NmuCI	GTSAC	1 cut(s)	541
NsbI	TGCGCA	1 cut(s)	882
NsiI	ATGCAT	1 cut(s)	853
NspI	RCATGY	1 cut(s)	948
NspV	TTCGAA	1 cut(s)	1210
OliI	CACNNNNGTG	1 cut(s)	930
PaeI	GCATGC	1 cut(s)	948
PaqCI	CACCTGC	2 cut(s)	1318, 1559
PceI	AGGCCT	1 cut(s)	1465
PcsI	WCGNNNNNNNCGW	1 cut(s)	213
PctI	GAATGC	3 cut(s)	451, 853, 1538
PdmI	GAANNNNTTC	1 cut(s)	1098
PfeI	GAWTC	7 cut(s)	275, 760, 875, 1082, 1115, 1277, 1457
PflMI	CCANNNNNTGG	1 cut(s)	904
PinAI	ACCGGT	1 cut(s)	691
PleI	GAGTC	3 cut(s)	757, 1255, 1354
PpsI	GAGTC	3 cut(s)	757, 1255, 1354
Ppu21I	YACGTR	1 cut(s)	1412
PpuMI	RGGWCCY	1 cut(s)	22
Psp124BI	GAGCTC	1 cut(s)	1610
Psp5II	RGGWCCY	1 cut(s)	22
Psp6I	CCWGG	5 cut(s)	90, 144, 151, 552, 1401
PspFI	CCCAGC	1 cut(s)	1330
PspGI	CCWGG	5 cut(s)	90, 144, 151, 552, 1401
PspN4I	GGNNCC	3 cut(s)	24, 150, 214
PspPI	GGNCC	2 cut(s)	22, 765
PspPPI	RGGWCCY	1 cut(s)	22
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	3 cut(s)	536, 1410, 1495
RsaNI	GTAC	3 cut(s)	535, 1409, 1494
RseI	CAYNNNNRTG	2 cut(s)	908, 930
Rsr2I	CGGWCCG	1 cut(s)	765
RsrII	CGGWCCG	1 cut(s)	765
SacI	GAGCTC	1 cut(s)	1610
SaqAI	TTAA	2 cut(s)	1158, 1371
Sau3AI	GATC	4 cut(s)	440, 457, 717, 991
Sau96I	GGNCC	2 cut(s)	22, 765
SchI	GAGTC	3 cut(s)	758, 1256, 1354
ScrFI	CCNGG	5 cut(s)	92, 146, 153, 554, 1403
SduI	GDGCHC	1 cut(s)	1610
SfaNI	GCATC	1 cut(s)	1322
SfuI	TTCGAA	1 cut(s)	1210
SinI	GGWCC	2 cut(s)	22, 765
SmiMI	CAYNNNNRTG	2 cut(s)	908, 930
SmlI	CTYRAG	1 cut(s)	509
SmoI	CTYRAG	1 cut(s)	509
SphI	GCATGC	1 cut(s)	948
Sse9I	AATT	8 cut(s)	367, 382, 421, 463, 685, 1378, 1625, 1634
SseBI	AGGCCT	1 cut(s)	1465
SsiI	CCGC	7 cut(s)	84, 99, 105, 168, 210, 602, 1535
SstI	GAGCTC	1 cut(s)	1610
StuI	AGGCCT	1 cut(s)	1465
StyD4I	CCNGG	5 cut(s)	90, 144, 151, 552, 1401
StyI	CCWWGG	3 cut(s)	18, 1383, 1543
TaaI	ACNGT	2 cut(s)	190, 1006
TaiI	ACGT	3 cut(s)	201, 1414, 1495
TaqI	TCGA	6 cut(s)	183, 350, 443, 645, 1210, 1594
TaqII	GACCGA	1 cut(s)	753
TasI	AATT	8 cut(s)	367, 382, 421, 463, 685, 1378, 1625, 1634
TauI	GCSGC	5 cut(s)	86, 101, 170, 213, 1538
TfiI	GAWTC	7 cut(s)	275, 760, 875, 1082, 1115, 1277, 1457
Tru1I	TTAA	2 cut(s)	1158, 1371
Tru9I	TTAA	2 cut(s)	1158, 1371
TscAI	CASTG	1 cut(s)	813
TseFI	GTSAC	1 cut(s)	541
TseI	GCWGC	6 cut(s)	170, 281, 320, 1172, 1517, 1553
Tsp45I	GTSAC	1 cut(s)	541
TspDTI	ATGAA	1 cut(s)	1056
TspGWI	ACGGA	3 cut(s)	165, 757, 920
TspRI	CASTG	1 cut(s)	813
Van91I	CCANNNNNTGG	1 cut(s)	904
VpaK11BI	GGWCC	2 cut(s)	22, 765
XagI	CCTNNNNNAGG	1 cut(s)	133
XapI	RAATTY	5 cut(s)	463, 685, 1378, 1625, 1634
XceI	RCATGY	1 cut(s)	948
XcmI	CCANNNNNNNNNTGG	1 cut(s)	427
XmnI	GAANNNNTTC	1 cut(s)	1098
Zsp2I	ATGCAT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.