E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23860 AT4G23860 AT4G23860 AT4G23860 |
| fragaria_vesca | FvH4_5g04600 FvH4_5g04600 FvH4_5g04600 |
| malus_domestica | MD06G1107100.v1.1 MD14G1128900.v1.1 |
| prunus_persica | Prupe.5G120100_v2.0.a1 Prupe.5G120100_v2.0.a1 |
| pyrus_communis | pycom06g10120 |
| rosa_chinensis | RchiOBHm_Chr7g0194791 |
| rosa_laevigata | RLG00000004169 |
| rosa_multiflora | Rmu_sc0004722.1_g000002 Rmu_sc0007833.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00235070 Rroxscaffold_3G00260980 Rroxscaffold_6G00410890 |
| rosa_rugosa | Rorug07G0018400.1 |
| rosa_samantha | Rh7AG146100 Rh7BG146000 Rh7CG150000 Rh7DG147400 |
| rosa_wichuraiana | Rw4G009500 Rw7G012470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 720 |
| AarI | CACCTGC | 2 cut(s) | 395, 912 |
| Acc36I | ACCTGC | 2 cut(s) | 395, 912 |
| AciI | CCGC | 2 cut(s) | 390, 1118 |
| AclWI | GGATC | 4 cut(s) | 78, 401, 691, 1154 |
| AcoI | YGGCCR | 2 cut(s) | 232, 1081 |
| AcsI | RAATTY | 7 cut(s) | 265, 286, 293, 302, 349, 772, 941 |
| AfaI | GTAC | 2 cut(s) | 124, 356 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 186, 743 |
| AgsI | TTSAA | 4 cut(s) | 42, 291, 370, 419 |
| AjiI | CACGTC | 1 cut(s) | 1179 |
| AjnI | CCWGG | 2 cut(s) | 1146, 1194 |
| AluBI | AGCT | 7 cut(s) | 86, 209, 216, 316, 677, 694, 1135 |
| AluI | AGCT | 7 cut(s) | 86, 209, 216, 316, 677, 694, 1135 |
| Alw26I | GTCTC | 1 cut(s) | 504 |
| AlwI | GGATC | 4 cut(s) | 78, 401, 691, 1154 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 79 |
| AoxI | GGCC | 3 cut(s) | 232, 481, 1081 |
| ApeKI | GCWGC | 3 cut(s) | 213, 605, 1039 |
| ApoI | RAATTY | 7 cut(s) | 265, 286, 293, 302, 349, 772, 941 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 28 |
| AspLEI | GCGC | 1 cut(s) | 1224 |
| AspS9I | GGNCC | 1 cut(s) | 255 |
| AsuHPI | GGTGA | 2 cut(s) | 533, 758 |
| AvaII | GGWCC | 1 cut(s) | 255 |
| BalI | TGGCCA | 2 cut(s) | 234, 1083 |
| BauI | CACGAG | 1 cut(s) | 236 |
| BbsI | GAAGAC | 2 cut(s) | 426, 990 |
| BbvI | GCAGC | 3 cut(s) | 225, 617, 1051 |
| BccI | CCATC | 2 cut(s) | 224, 1171 |
| BciT130I | CCWGG | 2 cut(s) | 1148, 1196 |
| BclI | TGATCA | 1 cut(s) | 796 |
| BcoDI | GTCTC | 1 cut(s) | 504 |
| BfaI | CTAG | 1 cut(s) | 1211 |
| BfmI | CTRYAG | 1 cut(s) | 919 |
| BfuAI | ACCTGC | 2 cut(s) | 395, 912 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 231 |
| BisI | GCNGC | 3 cut(s) | 214, 606, 1040 |
| BlsI | GCNGC | 3 cut(s) | 215, 607, 1041 |
| Bme1390I | CCNGG | 2 cut(s) | 1148, 1196 |
| Bme18I | GGWCC | 1 cut(s) | 255 |
| BmgBI | CACGTC | 1 cut(s) | 1179 |
| BmgT120I | GGNCC | 1 cut(s) | 255 |
| BmiI | GGNNCC | 1 cut(s) | 464 |
| BmrFI | CCNGG | 2 cut(s) | 1148, 1196 |
| BmsI | GCATC | 4 cut(s) | 545, 802, 847, 901 |
| BpiI | GAAGAC | 2 cut(s) | 426, 990 |
| BpmI | CTGGAG | 1 cut(s) | 716 |
| BpuEI | CTTGAG | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 1 cut(s) | 763 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 186, 743 |
| Bse1I | ACTGG | 3 cut(s) | 84, 464, 643 |
| Bse3DI | GCAATG | 1 cut(s) | 1113 |
| BseBI | CCWGG | 2 cut(s) | 1148, 1196 |
| BseDI | CCNNGG | 1 cut(s) | 763 |
| BseGI | GGATG | 5 cut(s) | 25, 67, 560, 862, 916 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 186, 743 |
| BseMI | GCAATG | 1 cut(s) | 1113 |
| BseMII | CTCAG | 2 cut(s) | 573, 1047 |
| BseNI | ACTGG | 3 cut(s) | 84, 464, 643 |
| BseRI | GAGGAG | 1 cut(s) | 764 |
| BseXI | GCAGC | 3 cut(s) | 225, 617, 1051 |
| BseYI | CCCAGC | 1 cut(s) | 194 |
| BsgI | GTGCAG | 2 cut(s) | 367, 955 |
| Bsh1285I | CGRYCG | 1 cut(s) | 394 |
| BshFI | GGCC | 3 cut(s) | 234, 483, 1083 |
| BsiEI | CGRYCG | 1 cut(s) | 394 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 186, 743 |
| BsmAI | GTCTC | 1 cut(s) | 504 |
| BsmBI | CGTCTC | 1 cut(s) | 504 |
| BsmI | GAATGC | 1 cut(s) | 196 |
| BsnI | GGCC | 3 cut(s) | 234, 483, 1083 |
| Bsp143I | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| BspACI | CCGC | 2 cut(s) | 390, 1118 |
| BspANI | GGCC | 3 cut(s) | 234, 483, 1083 |
| BspCNI | CTCAG | 2 cut(s) | 572, 1048 |
| BspLI | GGNNCC | 1 cut(s) | 464 |
| BspMAI | CTGCAG | 1 cut(s) | 923 |
| BspMI | ACCTGC | 2 cut(s) | 395, 912 |
| BspPI | GGATC | 4 cut(s) | 78, 401, 691, 1154 |
| BsrDI | GCAATG | 1 cut(s) | 1113 |
| BsrI | ACTGG | 3 cut(s) | 84, 464, 643 |
| BssECI | CCNNGG | 1 cut(s) | 763 |
| BssMI | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| BssSI | CACGAG | 1 cut(s) | 236 |
| BssT1I | CCWWGG | 1 cut(s) | 763 |
| Bst2BI | CACGAG | 1 cut(s) | 236 |
| Bst2UI | CCWGG | 2 cut(s) | 1148, 1196 |
| Bst4CI | ACNGT | 3 cut(s) | 8, 37, 441 |
| Bst6I | CTCTTC | 3 cut(s) | 140, 496, 1016 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 4 cut(s) | 153, 211, 314, 1226 |
| BstDEI | CTNAG | 2 cut(s) | 559, 1056 |
| BstF5I | GGATG | 5 cut(s) | 25, 67, 560, 862, 916 |
| BstHHI | GCGC | 1 cut(s) | 1224 |
| BstKTI | GATC | 5 cut(s) | 73, 409, 686, 799, 1162 |
| BstMAI | GTCTC | 1 cut(s) | 504 |
| BstMBI | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| BstMCI | CGRYCG | 1 cut(s) | 394 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 111, 174, 210, 222, 231 |
| BstNI | CCWGG | 2 cut(s) | 1148, 1196 |
| BstSCI | CCNGG | 2 cut(s) | 1146, 1194 |
| BstSFI | CTRYAG | 1 cut(s) | 919 |
| BstV1I | GCAGC | 3 cut(s) | 225, 617, 1051 |
| BstV2I | GAAGAC | 2 cut(s) | 426, 990 |
| BstX2I | RGATCY | 1 cut(s) | 683 |
| BstYI | RGATCY | 1 cut(s) | 683 |
| BsuRI | GGCC | 3 cut(s) | 234, 483, 1083 |
| BtgZI | GCGATG | 1 cut(s) | 120 |
| BtrI | CACGTC | 1 cut(s) | 1179 |
| BtsCI | GGATG | 5 cut(s) | 25, 67, 560, 862, 916 |
| BtsI | GCAGTG | 1 cut(s) | 943 |
| BtsIMutI | CAGTG | 3 cut(s) | 13, 446, 943 |
| BveI | ACCTGC | 2 cut(s) | 395, 912 |
| Cac8I | GCNNGC | 4 cut(s) | 153, 211, 314, 1226 |
| CaiI | CAGNNNCTG | 1 cut(s) | 79 |
| CfoI | GCGC | 1 cut(s) | 1224 |
| Cfr13I | GGNCC | 1 cut(s) | 255 |
| CsiI | ACCWGGT | 1 cut(s) | 1194 |
| Csp6I | GTAC | 2 cut(s) | 123, 355 |
| CviAII | CATG | 5 cut(s) | 165, 227, 467, 1085, 1123 |
| CviQI | GTAC | 2 cut(s) | 123, 355 |
| DdeI | CTNAG | 2 cut(s) | 559, 1056 |
| DpnI | GATC | 5 cut(s) | 72, 408, 685, 798, 1161 |
| DpnII | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| EaeI | YGGCCR | 2 cut(s) | 232, 1081 |
| Eam1104I | CTCTTC | 3 cut(s) | 140, 496, 1016 |
| EarI | CTCTTC | 3 cut(s) | 140, 496, 1016 |
| Eco130I | CCWWGG | 1 cut(s) | 763 |
| Eco47I | GGWCC | 1 cut(s) | 255 |
| EcoRI | GAATTC | 2 cut(s) | 302, 349 |
| EcoRII | CCWGG | 2 cut(s) | 1146, 1194 |
| EcoT14I | CCWWGG | 1 cut(s) | 763 |
| ErhI | CCWWGG | 1 cut(s) | 763 |
| Esp3I | CGTCTC | 1 cut(s) | 504 |
| FaeI | CATG | 5 cut(s) | 168, 230, 470, 1088, 1126 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1119, 1151 |
| FatI | CATG | 5 cut(s) | 164, 226, 466, 1084, 1122 |
| FbaI | TGATCA | 1 cut(s) | 796 |
| Fnu4HI | GCNGC | 3 cut(s) | 214, 606, 1040 |
| FokI | GGATG | 5 cut(s) | 32, 74, 567, 869, 923 |
| Fsp4HI | GCNGC | 3 cut(s) | 214, 606, 1040 |
| FspBI | CTAG | 1 cut(s) | 1211 |
| GlaI | GCGC | 1 cut(s) | 1223 |
| GluI | GCNGC | 3 cut(s) | 214, 606, 1040 |
| GsaI | CCCAGC | 1 cut(s) | 198 |
| GsuI | CTGGAG | 1 cut(s) | 716 |
| HaeIII | GGCC | 3 cut(s) | 234, 483, 1083 |
| HhaI | GCGC | 1 cut(s) | 1224 |
| Hin1II | CATG | 5 cut(s) | 168, 230, 470, 1088, 1126 |
| Hin6I | GCGC | 1 cut(s) | 1222 |
| HinP1I | GCGC | 1 cut(s) | 1222 |
| HincII | GTYRAC | 1 cut(s) | 1062 |
| HindII | GTYRAC | 1 cut(s) | 1062 |
| HindIII | AAGCTT | 1 cut(s) | 314 |
| HinfI | GANTC | 6 cut(s) | 488, 502, 623, 1102, 1151, 1207 |
| HphI | GGTGA | 2 cut(s) | 533, 758 |
| Hpy166II | GTNNAC | 4 cut(s) | 123, 524, 1062, 1192 |
| Hpy188I | TCNGA | 5 cut(s) | 496, 733, 796, 1107, 1183 |
| Hpy188III | TCNNGA | 4 cut(s) | 74, 404, 410, 687 |
| Hpy8I | GTNNAC | 4 cut(s) | 123, 524, 1062, 1192 |
| HpyAV | CCTTC | 2 cut(s) | 104, 512 |
| HpyCH4III | ACNGT | 3 cut(s) | 8, 37, 441 |
| HpyCH4IV | ACGT | 1 cut(s) | 1178 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 111, 174, 210, 222, 231 |
| HpyF3I | CTNAG | 2 cut(s) | 559, 1056 |
| HpySE526I | ACGT | 1 cut(s) | 1178 |
| Hsp92II | CATG | 5 cut(s) | 168, 230, 470, 1088, 1126 |
| HspAI | GCGC | 1 cut(s) | 1222 |
| Ksp22I | TGATCA | 1 cut(s) | 796 |
| Kzo9I | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| LmnI | GCTCC | 1 cut(s) | 765 |
| Lsp1109I | GCAGC | 3 cut(s) | 225, 617, 1051 |
| LweI | GCATC | 4 cut(s) | 545, 802, 847, 901 |
| MabI | ACCWGGT | 1 cut(s) | 1194 |
| MaeI | CTAG | 1 cut(s) | 1211 |
| MaeII | ACGT | 1 cut(s) | 1178 |
| MaeIII | GTNAC | 2 cut(s) | 667, 826 |
| MalI | GATC | 5 cut(s) | 72, 408, 685, 798, 1161 |
| MboI | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| MboII | GAAGA | 8 cut(s) | 157, 298, 431, 483, 618, 995, 1033, 1040 |
| MflI | RGATCY | 1 cut(s) | 683 |
| MlsI | TGGCCA | 2 cut(s) | 234, 1083 |
| MluNI | TGGCCA | 2 cut(s) | 234, 1083 |
| MlyI | GAGTC | 1 cut(s) | 482 |
| Mox20I | TGGCCA | 2 cut(s) | 234, 1083 |
| MscI | TGGCCA | 2 cut(s) | 234, 1083 |
| MseI | TTAA | 3 cut(s) | 578, 633, 846 |
| MslI | CAYNNNNRTG | 1 cut(s) | 992 |
| Msp20I | TGGCCA | 2 cut(s) | 234, 1083 |
| MspR9I | CCNGG | 2 cut(s) | 1148, 1196 |
| Mva1269I | GAATGC | 1 cut(s) | 196 |
| MvaI | CCWGG | 2 cut(s) | 1148, 1196 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 111, 174, 210, 222, 231 |
| NdeII | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| NlaIII | CATG | 5 cut(s) | 168, 230, 470, 1088, 1126 |
| NlaIV | GGNNCC | 1 cut(s) | 464 |
| NmuCI | GTSAC | 1 cut(s) | 667 |
| PaqCI | CACCTGC | 2 cut(s) | 395, 912 |
| PctI | GAATGC | 1 cut(s) | 196 |
| PfeI | GAWTC | 5 cut(s) | 502, 623, 1102, 1151, 1207 |
| PfoI | TCCNGGA | 1 cut(s) | 1146 |
| PkrI | GCNGC | 3 cut(s) | 215, 607, 1041 |
| PleI | GAGTC | 1 cut(s) | 482 |
| PpsI | GAGTC | 1 cut(s) | 482 |
| PsiI | TTATAA | 1 cut(s) | 720 |
| Psp6I | CCWGG | 2 cut(s) | 1146, 1194 |
| PspFI | CCCAGC | 1 cut(s) | 194 |
| PspGI | CCWGG | 2 cut(s) | 1146, 1194 |
| PspN4I | GGNNCC | 1 cut(s) | 464 |
| PspPI | GGNCC | 1 cut(s) | 255 |
| PstI | CTGCAG | 1 cut(s) | 923 |
| PstNI | CAGNNNCTG | 1 cut(s) | 79 |
| PsuI | RGATCY | 1 cut(s) | 683 |
| RsaI | GTAC | 2 cut(s) | 124, 356 |
| RsaNI | GTAC | 2 cut(s) | 123, 355 |
| RseI | CAYNNNNRTG | 1 cut(s) | 992 |
| SaqAI | TTAA | 3 cut(s) | 578, 633, 846 |
| SatI | GCNGC | 3 cut(s) | 214, 606, 1040 |
| Sau3AI | GATC | 5 cut(s) | 70, 406, 683, 796, 1159 |
| Sau96I | GGNCC | 1 cut(s) | 255 |
| SchI | GAGTC | 1 cut(s) | 482 |
| ScrFI | CCNGG | 2 cut(s) | 1148, 1196 |
| SexAI | ACCWGGT | 1 cut(s) | 1194 |
| SfaNI | GCATC | 4 cut(s) | 545, 802, 847, 901 |
| SfcI | CTRYAG | 1 cut(s) | 919 |
| SinI | GGWCC | 1 cut(s) | 255 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 992 |
| SmlI | CTYRAG | 1 cut(s) | 56 |
| SmoI | CTYRAG | 1 cut(s) | 56 |
| SsiI | CCGC | 2 cut(s) | 390, 1118 |
| SspMI | CTAG | 1 cut(s) | 1211 |
| StyD4I | CCNGG | 2 cut(s) | 1146, 1194 |
| StyI | CCWWGG | 1 cut(s) | 763 |
| TaaI | ACNGT | 3 cut(s) | 8, 37, 441 |
| TaiI | ACGT | 1 cut(s) | 1181 |
| TaqI | TCGA | 1 cut(s) | 1071 |
| TfiI | GAWTC | 5 cut(s) | 502, 623, 1102, 1151, 1207 |
| Tru1I | TTAA | 3 cut(s) | 578, 633, 846 |
| Tru9I | TTAA | 3 cut(s) | 578, 633, 846 |
| TscAI | CASTG | 3 cut(s) | 13, 446, 943 |
| TseFI | GTSAC | 1 cut(s) | 667 |
| TseI | GCWGC | 3 cut(s) | 213, 605, 1039 |
| Tsp45I | GTSAC | 1 cut(s) | 667 |
| TspDTI | ATGAA | 5 cut(s) | 123, 158, 366, 963, 1139 |
| TspGWI | ACGGA | 1 cut(s) | 619 |
| TspRI | CASTG | 3 cut(s) | 13, 446, 943 |
| VpaK11BI | GGWCC | 1 cut(s) | 255 |
| XapI | RAATTY | 7 cut(s) | 265, 286, 293, 302, 349, 772, 941 |
| XspI | CTAG | 1 cut(s) | 1211 |