Long chain base biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48780 AT3G48780 AT3G48790 AT3G48790 AT5G23670 AT5G23670 |
| fragaria_vesca | FvH4_6g54160 |
| malus_domestica | MD09G1004800.v1.1 MD17G1008800.v1.1 |
| prunus_persica | Prupe.3G312000_v2.0.a1 Prupe.5G144700_v2.0.a1 |
| pyrus_communis | pycom111g00350 pycom17g00370 |
| rosa_chinensis | RchiOBHm_Chr2g0176331 |
| rosa_laevigata | RLG00000022404 |
| rosa_multiflora | Rmu_sc0019886.1_g000001 Rmu_sc0027060.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00076560 |
| rosa_rugosa | Rorug02G0593300 |
| rosa_samantha | Rh2AG671800 Rh2BG683300 Rh2CG646000 Rh2DG696800 |
| rosa_wichuraiana | Rw2G055090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1088 |
| AccB1I | GGYRCC | 3 cut(s) | 303, 602, 1088 |
| AccII | CGCG | 2 cut(s) | 26, 134 |
| AciI | CCGC | 2 cut(s) | 24, 899 |
| AclWI | GGATC | 4 cut(s) | 325, 949, 960, 973 |
| AcoI | YGGCCR | 2 cut(s) | 67, 1311 |
| AcsI | RAATTY | 3 cut(s) | 186, 681, 1230 |
| AcuI | CTGAAG | 5 cut(s) | 25, 70, 1008, 1126, 1277 |
| AdeI | CACNNNGTG | 1 cut(s) | 368 |
| AfaI | GTAC | 2 cut(s) | 403, 1090 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 313, 829, 1098 |
| AgsI | TTSAA | 2 cut(s) | 385, 580 |
| AjnI | CCWGG | 2 cut(s) | 123, 822 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 609, 641 |
| AluBI | AGCT | 7 cut(s) | 45, 620, 775, 962, 1007, 1040, 1153 |
| AluI | AGCT | 7 cut(s) | 45, 620, 775, 962, 1007, 1040, 1153 |
| Alw21I | GWGCWC | 3 cut(s) | 35, 223, 1321 |
| Alw26I | GTCTC | 3 cut(s) | 72, 1176, 1433 |
| AlwI | GGATC | 4 cut(s) | 325, 949, 960, 973 |
| Ama87I | CYCGRG | 1 cut(s) | 606 |
| AoxI | GGCC | 2 cut(s) | 67, 1311 |
| ApeKI | GCWGC | 3 cut(s) | 341, 1040, 1153 |
| ApoI | RAATTY | 3 cut(s) | 186, 681, 1230 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1356 |
| Asp718I | GGTACC | 1 cut(s) | 1088 |
| AspA2I | CCTAGG | 1 cut(s) | 698 |
| AspLEI | GCGC | 1 cut(s) | 136 |
| AsuC2I | CCSGG | 1 cut(s) | 1292 |
| AsuHPI | GGTGA | 2 cut(s) | 1023, 1403 |
| AvaI | CYCGRG | 1 cut(s) | 606 |
| AvrII | CCTAGG | 1 cut(s) | 698 |
| BaeGI | GKGCMC | 1 cut(s) | 607 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1011, 1044 |
| BalI | TGGCCA | 1 cut(s) | 1313 |
| BamHI | GGATCC | 1 cut(s) | 965 |
| BanI | GGYRCC | 3 cut(s) | 303, 602, 1088 |
| BanII | GRGCYC | 2 cut(s) | 1105, 1428 |
| BauI | CACGAG | 1 cut(s) | 366 |
| Bbv12I | GWGCWC | 3 cut(s) | 35, 223, 1321 |
| BbvI | GCAGC | 3 cut(s) | 328, 1027, 1140 |
| BccI | CCATC | 7 cut(s) | 380, 416, 536, 910, 1079, 1156, 1457 |
| BceAI | ACGGC | 2 cut(s) | 64, 912 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 400, 434 |
| BciT130I | CCWGG | 2 cut(s) | 125, 824 |
| BcnI | CCSGG | 1 cut(s) | 1292 |
| BcoDI | GTCTC | 3 cut(s) | 72, 1176, 1433 |
| BfaI | CTAG | 2 cut(s) | 699, 1245 |
| BfmI | CTRYAG | 2 cut(s) | 621, 1154 |
| BglII | AGATCT | 1 cut(s) | 1354 |
| BisI | GCNGC | 3 cut(s) | 342, 1041, 1154 |
| BlnI | CCTAGG | 1 cut(s) | 698 |
| BlpI | GCTNAGC | 1 cut(s) | 1422 |
| BlsI | GCNGC | 3 cut(s) | 343, 1042, 1155 |
| BmcAI | AGTACT | 1 cut(s) | 403 |
| Bme1390I | CCNGG | 3 cut(s) | 125, 824, 1292 |
| BmeT110I | CYCGRG | 1 cut(s) | 606 |
| BmiI | GGNNCC | 4 cut(s) | 305, 604, 967, 1090 |
| BmrFI | CCNGG | 3 cut(s) | 125, 824, 1292 |
| BmrI | ACTGGG | 1 cut(s) | 1422 |
| BmsI | GCATC | 3 cut(s) | 217, 353, 478 |
| BmuI | ACTGGG | 1 cut(s) | 1422 |
| BpmI | CTGGAG | 2 cut(s) | 107, 1020 |
| Bpu10I | CCTNAGC | 1 cut(s) | 613 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1422 |
| BpuEI | CTTGAG | 1 cut(s) | 173 |
| BpuMI | CCSGG | 1 cut(s) | 1292 |
| BsaAI | YACGTR | 1 cut(s) | 1322 |
| BsaBI | GATNNNNATC | 1 cut(s) | 728 |
| BsaJI | CCNNGG | 7 cut(s) | 124, 607, 698, 713, 969, 1347, 1368 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 609, 639 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 313, 829, 1098 |
| Bse1I | ACTGG | 4 cut(s) | 456, 505, 1092, 1428 |
| Bse3DI | GCAATG | 1 cut(s) | 437 |
| Bse8I | GATNNNNATC | 1 cut(s) | 728 |
| BseBI | CCWGG | 2 cut(s) | 125, 824 |
| BseDI | CCNNGG | 7 cut(s) | 124, 607, 698, 713, 969, 1347, 1368 |
| BseGI | GGATG | 4 cut(s) | 528, 832, 907, 1090 |
| BseJI | GATNNNNATC | 1 cut(s) | 728 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 313, 829, 1098 |
| BseMI | GCAATG | 1 cut(s) | 437 |
| BseMII | CTCAG | 5 cut(s) | 627, 678, 1118, 1375, 1413 |
| BseNI | ACTGG | 4 cut(s) | 456, 505, 1092, 1428 |
| BseRI | GAGGAG | 1 cut(s) | 1290 |
| BseSI | GKGCMC | 1 cut(s) | 607 |
| BseXI | GCAGC | 3 cut(s) | 328, 1027, 1140 |
| BseYI | CCCAGC | 1 cut(s) | 1003 |
| BsgI | GTGCAG | 1 cut(s) | 343 |
| Bsh1236I | CGCG | 2 cut(s) | 26, 134 |
| BshFI | GGCC | 2 cut(s) | 69, 1313 |
| BshNI | GGYRCC | 3 cut(s) | 303, 602, 1088 |
| BsiHKAI | GWGCWC | 3 cut(s) | 35, 223, 1321 |
| BsiHKCI | CYCGRG | 1 cut(s) | 606 |
| BsiSI | CCGG | 1 cut(s) | 1292 |
| BslFI | GGGAC | 1 cut(s) | 705 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 313, 829, 1098 |
| BsmAI | GTCTC | 3 cut(s) | 72, 1176, 1433 |
| BsmFI | GGGAC | 1 cut(s) | 705 |
| BsmI | GAATGC | 1 cut(s) | 1286 |
| BsnI | GGCC | 2 cut(s) | 69, 1313 |
| BsoBI | CYCGRG | 1 cut(s) | 606 |
| Bsp1286I | GDGCHC | 6 cut(s) | 35, 223, 607, 1105, 1321, 1428 |
| Bsp143I | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1422 |
| Bsp19I | CCATGG | 1 cut(s) | 713 |
| BspACI | CCGC | 2 cut(s) | 24, 899 |
| BspANI | GGCC | 2 cut(s) | 69, 1313 |
| BspCNI | CTCAG | 5 cut(s) | 626, 679, 1117, 1374, 1414 |
| BspFNI | CGCG | 2 cut(s) | 26, 134 |
| BspLI | GGNNCC | 4 cut(s) | 305, 604, 967, 1090 |
| BspMAI | CTGCAG | 1 cut(s) | 1158 |
| BspPI | GGATC | 4 cut(s) | 325, 949, 960, 973 |
| BspT107I | GGYRCC | 3 cut(s) | 303, 602, 1088 |
| BsrDI | GCAATG | 1 cut(s) | 437 |
| BsrI | ACTGG | 4 cut(s) | 456, 505, 1092, 1428 |
| BssECI | CCNNGG | 7 cut(s) | 124, 607, 698, 713, 969, 1347, 1368 |
| BssMI | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| BssSI | CACGAG | 1 cut(s) | 366 |
| BssT1I | CCWWGG | 5 cut(s) | 698, 713, 969, 1347, 1368 |
| Bst2BI | CACGAG | 1 cut(s) | 366 |
| Bst2UI | CCWGG | 2 cut(s) | 125, 824 |
| Bst4CI | ACNGT | 3 cut(s) | 625, 752, 1282 |
| Bst6I | CTCTTC | 2 cut(s) | 450, 859 |
| BstBAI | YACGTR | 1 cut(s) | 1322 |
| BstC8I | GCNNGC | 2 cut(s) | 53, 773 |
| BstDEI | CTNAG | 5 cut(s) | 613, 687, 1104, 1361, 1422 |
| BstDSI | CCRYGG | 1 cut(s) | 713 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 827 |
| BstF5I | GGATG | 4 cut(s) | 528, 832, 907, 1090 |
| BstFNI | CGCG | 2 cut(s) | 26, 134 |
| BstHHI | GCGC | 1 cut(s) | 136 |
| BstKTI | GATC | 6 cut(s) | 121, 141, 320, 944, 968, 1357 |
| BstMAI | GTCTC | 3 cut(s) | 72, 1176, 1433 |
| BstMBI | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 227, 1210, 1292, 1432 |
| BstNI | CCWGG | 2 cut(s) | 125, 824 |
| BstSCI | CCNGG | 3 cut(s) | 123, 822, 1290 |
| BstSFI | CTRYAG | 2 cut(s) | 621, 1154 |
| BstSLI | GKGCMC | 1 cut(s) | 607 |
| BstUI | CGCG | 2 cut(s) | 26, 134 |
| BstV1I | GCAGC | 3 cut(s) | 328, 1027, 1140 |
| BstX2I | RGATCY | 2 cut(s) | 965, 1354 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1456 |
| BstYI | RGATCY | 2 cut(s) | 965, 1354 |
| BsuRI | GGCC | 2 cut(s) | 69, 1313 |
| BtgI | CCRYGG | 1 cut(s) | 713 |
| BtsCI | GGATG | 4 cut(s) | 528, 832, 907, 1090 |
| Cac8I | GCNNGC | 2 cut(s) | 53, 773 |
| CfoI | GCGC | 1 cut(s) | 136 |
| Csp6I | GTAC | 2 cut(s) | 402, 1089 |
| CviAII | CATG | 3 cut(s) | 505, 714, 945 |
| CviQI | GTAC | 2 cut(s) | 402, 1089 |
| DdeI | CTNAG | 5 cut(s) | 613, 687, 1104, 1361, 1422 |
| DpnI | GATC | 6 cut(s) | 120, 140, 319, 943, 967, 1356 |
| DpnII | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| DraIII | CACNNNGTG | 1 cut(s) | 368 |
| EaeI | YGGCCR | 2 cut(s) | 67, 1311 |
| Eam1104I | CTCTTC | 2 cut(s) | 450, 859 |
| EarI | CTCTTC | 2 cut(s) | 450, 859 |
| EciI | GGCGGA | 1 cut(s) | 914 |
| Eco130I | CCWWGG | 5 cut(s) | 698, 713, 969, 1347, 1368 |
| Eco24I | GRGCYC | 2 cut(s) | 1105, 1428 |
| Eco57I | CTGAAG | 5 cut(s) | 25, 70, 1008, 1126, 1277 |
| Eco88I | CYCGRG | 1 cut(s) | 606 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 827 |
| EcoRI | GAATTC | 1 cut(s) | 186 |
| EcoRII | CCWGG | 2 cut(s) | 123, 822 |
| EcoT14I | CCWWGG | 5 cut(s) | 698, 713, 969, 1347, 1368 |
| EcoT38I | GRGCYC | 2 cut(s) | 1105, 1428 |
| ErhI | CCWWGG | 5 cut(s) | 698, 713, 969, 1347, 1368 |
| FaeI | CATG | 3 cut(s) | 508, 717, 948 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1151, 1183 |
| FaqI | GGGAC | 1 cut(s) | 705 |
| FatI | CATG | 3 cut(s) | 504, 713, 944 |
| FauNDI | CATATG | 1 cut(s) | 814 |
| Fnu4HI | GCNGC | 3 cut(s) | 342, 1041, 1154 |
| FokI | GGATG | 4 cut(s) | 515, 839, 914, 1097 |
| FriOI | GRGCYC | 2 cut(s) | 1105, 1428 |
| Fsp4HI | GCNGC | 3 cut(s) | 342, 1041, 1154 |
| FspBI | CTAG | 2 cut(s) | 699, 1245 |
| GlaI | GCGC | 1 cut(s) | 135 |
| GluI | GCNGC | 3 cut(s) | 342, 1041, 1154 |
| GsaI | CCCAGC | 1 cut(s) | 1007 |
| GsuI | CTGGAG | 2 cut(s) | 107, 1020 |
| HaeIII | GGCC | 2 cut(s) | 69, 1313 |
| HapII | CCGG | 1 cut(s) | 1292 |
| HhaI | GCGC | 1 cut(s) | 136 |
| Hin1II | CATG | 3 cut(s) | 508, 717, 948 |
| Hin6I | GCGC | 1 cut(s) | 134 |
| HinP1I | GCGC | 1 cut(s) | 134 |
| HincII | GTYRAC | 1 cut(s) | 892 |
| HindII | GTYRAC | 1 cut(s) | 892 |
| HinfI | GANTC | 5 cut(s) | 377, 572, 1120, 1190, 1386 |
| HpaII | CCGG | 1 cut(s) | 1292 |
| HphI | GGTGA | 2 cut(s) | 1023, 1403 |
| Hpy166II | GTNNAC | 2 cut(s) | 820, 892 |
| Hpy188I | TCNGA | 8 cut(s) | 89, 349, 688, 1107, 1150, 1181, 1257, 1364 |
| Hpy188III | TCNNGA | 5 cut(s) | 191, 224, 615, 779, 1124 |
| Hpy8I | GTNNAC | 2 cut(s) | 820, 892 |
| Hpy99I | CGWCG | 1 cut(s) | 174 |
| HpyAV | CCTTC | 4 cut(s) | 73, 544, 660, 752 |
| HpyCH4III | ACNGT | 3 cut(s) | 625, 752, 1282 |
| HpyCH4IV | ACGT | 1 cut(s) | 1321 |
| HpyCH4V | TGCA | 8 cut(s) | 344, 360, 442, 467, 791, 1115, 1156, 1286 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 227, 1210, 1292, 1432 |
| HpyF3I | CTNAG | 5 cut(s) | 613, 687, 1104, 1361, 1422 |
| HpySE526I | ACGT | 1 cut(s) | 1321 |
| Hsp92II | CATG | 3 cut(s) | 508, 717, 948 |
| HspAI | GCGC | 1 cut(s) | 134 |
| KpnI | GGTACC | 1 cut(s) | 1092 |
| Kzo9I | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| LmnI | GCTCC | 3 cut(s) | 226, 617, 845 |
| Lsp1109I | GCAGC | 3 cut(s) | 328, 1027, 1140 |
| LweI | GCATC | 3 cut(s) | 217, 353, 478 |
| MaeI | CTAG | 2 cut(s) | 699, 1245 |
| MaeII | ACGT | 1 cut(s) | 1321 |
| MaeIII | GTNAC | 4 cut(s) | 128, 496, 514, 1276 |
| MalI | GATC | 6 cut(s) | 120, 140, 319, 943, 967, 1356 |
| MboI | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| MfeI | CAATTG | 2 cut(s) | 71, 591 |
| MflI | RGATCY | 2 cut(s) | 965, 1354 |
| MhlI | GDGCHC | 6 cut(s) | 35, 223, 607, 1105, 1321, 1428 |
| MlsI | TGGCCA | 1 cut(s) | 1313 |
| MluNI | TGGCCA | 1 cut(s) | 1313 |
| MlyI | GAGTC | 2 cut(s) | 386, 1395 |
| MmeI | TCCRAC | 3 cut(s) | 457, 661, 832 |
| Mox20I | TGGCCA | 1 cut(s) | 1313 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1356 |
| MscI | TGGCCA | 1 cut(s) | 1313 |
| MseI | TTAA | 2 cut(s) | 990, 1065 |
| Msp20I | TGGCCA | 1 cut(s) | 1313 |
| MspA1I | CMGCKG | 1 cut(s) | 1040 |
| MspI | CCGG | 1 cut(s) | 1292 |
| MspR9I | CCNGG | 3 cut(s) | 125, 824, 1292 |
| MunI | CAATTG | 2 cut(s) | 71, 591 |
| Mva1269I | GAATGC | 1 cut(s) | 1286 |
| MvaI | CCWGG | 2 cut(s) | 125, 824 |
| MvnI | CGCG | 2 cut(s) | 26, 134 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 227, 1210, 1292, 1432 |
| NciI | CCSGG | 1 cut(s) | 1292 |
| NcoI | CCATGG | 1 cut(s) | 713 |
| NdeI | CATATG | 1 cut(s) | 814 |
| NdeII | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| NlaIII | CATG | 3 cut(s) | 508, 717, 948 |
| NlaIV | GGNNCC | 4 cut(s) | 305, 604, 967, 1090 |
| NmuCI | GTSAC | 2 cut(s) | 514, 1276 |
| PctI | GAATGC | 1 cut(s) | 1286 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1356 |
| PfeI | GAWTC | 3 cut(s) | 572, 1120, 1190 |
| PkrI | GCNGC | 3 cut(s) | 343, 1042, 1155 |
| PleI | GAGTC | 2 cut(s) | 385, 1394 |
| PpsI | GAGTC | 2 cut(s) | 385, 1394 |
| Ppu21I | YACGTR | 1 cut(s) | 1322 |
| Psp6I | CCWGG | 2 cut(s) | 123, 822 |
| PspFI | CCCAGC | 1 cut(s) | 1003 |
| PspGI | CCWGG | 2 cut(s) | 123, 822 |
| PspN4I | GGNNCC | 4 cut(s) | 305, 604, 967, 1090 |
| PstI | CTGCAG | 1 cut(s) | 1158 |
| PsuI | RGATCY | 2 cut(s) | 965, 1354 |
| PvuII | CAGCTG | 1 cut(s) | 1040 |
| RsaI | GTAC | 2 cut(s) | 403, 1090 |
| RsaNI | GTAC | 2 cut(s) | 402, 1089 |
| SaqAI | TTAA | 2 cut(s) | 990, 1065 |
| SatI | GCNGC | 3 cut(s) | 342, 1041, 1154 |
| Sau3AI | GATC | 6 cut(s) | 118, 138, 317, 941, 965, 1354 |
| ScaI | AGTACT | 1 cut(s) | 403 |
| SchI | GAGTC | 2 cut(s) | 386, 1395 |
| ScrFI | CCNGG | 3 cut(s) | 125, 824, 1292 |
| SduI | GDGCHC | 6 cut(s) | 35, 223, 607, 1105, 1321, 1428 |
| SfaNI | GCATC | 3 cut(s) | 217, 353, 478 |
| SfcI | CTRYAG | 2 cut(s) | 621, 1154 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| SsiI | CCGC | 2 cut(s) | 24, 899 |
| SspMI | CTAG | 2 cut(s) | 699, 1245 |
| StyD4I | CCNGG | 3 cut(s) | 123, 822, 1290 |
| StyI | CCWWGG | 5 cut(s) | 698, 713, 969, 1347, 1368 |
| TaaI | ACNGT | 3 cut(s) | 625, 752, 1282 |
| TaiI | ACGT | 1 cut(s) | 1324 |
| TaqI | TCGA | 7 cut(s) | 184, 375, 420, 628, 738, 1096, 1384 |
| TatI | WGTACW | 1 cut(s) | 401 |
| TfiI | GAWTC | 3 cut(s) | 572, 1120, 1190 |
| Tru1I | TTAA | 2 cut(s) | 990, 1065 |
| Tru9I | TTAA | 2 cut(s) | 990, 1065 |
| TseFI | GTSAC | 2 cut(s) | 514, 1276 |
| TseI | GCWGC | 3 cut(s) | 341, 1040, 1153 |
| Tsp45I | GTSAC | 2 cut(s) | 514, 1276 |
| TspDTI | ATGAA | 2 cut(s) | 366, 564 |
| TspGWI | ACGGA | 1 cut(s) | 1132 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 827 |
| XapI | RAATTY | 3 cut(s) | 186, 681, 1230 |
| XmaJI | CCTAGG | 1 cut(s) | 698 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1356 |
| XspI | CTAG | 2 cut(s) | 699, 1245 |
| ZrmI | AGTACT | 1 cut(s) | 403 |