Prupe.5G146700_v2.0.a1

May serve as docking site to facilitate the association of other proteins to the plasma membrane

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
13464285 .. 13467017
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G146700.2

Sequence Viewer

Length: 357 bp
ATGCCGGAGGAGGATTTGGTGGACATAAAGTTCAGGTTGTATGATGGTTCCGATATTGGGCCGTTCAGCTACTCATCGGCCTCCACCGTTGATATGCTTAAGCAGAGGGTCGTCTCCGATTGGCCCAAAGGCAAAACTATGACACCCAAGACAGCTAATGAAGTGAAACTGATGAGTTTTGGCAAAATTTTGGAAAACAACAAGACAGTGGGTCAATGCAAATTACCTTTTGGTGATGTTGGTGGGGGAGTTATCATAATGCATGTTGTTGTACAGCCAGCTATAGAAAAGGCTAAAACAGAAAAGAAGGTTGATGATTTGCCCCGGAAAGTTGTCTGCTCCTGTTCCATATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

119

Amino Acids

12.98

Weight (kDa)

8.42

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 186
AfaI GTAC 1 cut(s) 273
AfiI CCNNNNNNNGG 1 cut(s) 57
AflII CTTAAG 1 cut(s) 98
AhdI GACNNNNNGTC 1 cut(s) 210
AloI GAACNNNNNNTCC 2 cut(s) 14, 46
AluBI AGCT 3 cut(s) 69, 155, 281
AluI AGCT 3 cut(s) 69, 155, 281
Alw26I GTCTC 1 cut(s) 118
AoxI GGCC 3 cut(s) 59, 78, 122
ApoI RAATTY 1 cut(s) 186
AspS9I GGNCC 2 cut(s) 59, 123
AsuC2I CCSGG 1 cut(s) 325
AsuHPI GGTGA 1 cut(s) 245
BccI CCATC 1 cut(s) 38
BceAI ACGGC 1 cut(s) 46
BcnI CCSGG 1 cut(s) 325
BcoDI GTCTC 1 cut(s) 118
BfmI CTRYAG 1 cut(s) 282
BfrI CTTAAG 1 cut(s) 98
Bme1390I CCNGG 1 cut(s) 325
BmeRI GACNNNNNGTC 1 cut(s) 210
BmgT120I GGNCC 2 cut(s) 59, 123
BmiI GGNNCC 1 cut(s) 49
BmrFI CCNGG 1 cut(s) 325
BpuMI CCSGG 1 cut(s) 325
BsaJI CCNNGG 1 cut(s) 323
Bsc4I CCNNNNNNNGG 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 323
BseLI CCNNNNNNNGG 1 cut(s) 57
BseRI GAGGAG 1 cut(s) 23
BshFI GGCC 3 cut(s) 61, 80, 124
BsiSI CCGG 2 cut(s) 5, 325
BslI CCNNNNNNNGG 1 cut(s) 57
BsmAI GTCTC 1 cut(s) 118
BsmBI CGTCTC 1 cut(s) 118
BsnI GGCC 3 cut(s) 61, 80, 124
Bsp1407I TGTACA 1 cut(s) 271
BspANI GGCC 3 cut(s) 61, 80, 124
BspLI GGNNCC 1 cut(s) 49
BspTI CTTAAG 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 271
BssECI CCNNGG 1 cut(s) 323
Bst4CI ACNGT 2 cut(s) 88, 208
BstAFI CTTAAG 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 271
BstC8I GCNNGC 1 cut(s) 279
BstMAI GTCTC 1 cut(s) 118
BstNSI RCATGY 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 323
BstSFI CTRYAG 1 cut(s) 282
BsuRI GGCC 3 cut(s) 61, 80, 124
BtsIMutI CAGTG 1 cut(s) 213
Cac8I GCNNGC 1 cut(s) 279
Cfr13I GGNCC 2 cut(s) 59, 123
Csp6I GTAC 1 cut(s) 272
CviAII CATG 1 cut(s) 263
CviJI RGCY 8 cut(s) 61, 69, 80, 124, 155, 277, 281, 293
CviKI_1 RGCY 8 cut(s) 61, 69, 80, 124, 155, 277, 281, 293
CviQI GTAC 1 cut(s) 272
DriI GACNNNNNGTC 1 cut(s) 210
Eam1105I GACNNNNNGTC 1 cut(s) 210
EcoT22I ATGCAT 1 cut(s) 264
Esp3I CGTCTC 1 cut(s) 118
FaeI CATG 1 cut(s) 266
FaiI YATR 8 cut(s) 26, 42, 95, 140, 257, 264, 284, 350
FatI CATG 1 cut(s) 262
HaeIII GGCC 3 cut(s) 61, 80, 124
HapII CCGG 2 cut(s) 5, 325
Hin1II CATG 1 cut(s) 266
HpaII CCGG 2 cut(s) 5, 325
HphI GGTGA 1 cut(s) 245
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 52, 118
Hpy8I GTNNAC 1 cut(s) 22
HpyAV CCTTC 1 cut(s) 301
HpyCH4III ACNGT 2 cut(s) 88, 208
HpyCH4V TGCA 2 cut(s) 219, 262
Hsp92II CATG 1 cut(s) 266
LmnI GCTCC 1 cut(s) 344
LpnPI CCDG 4 cut(s) 18, 19, 291, 338
MluCI AATT 2 cut(s) 186, 221
MnlI CCTC 3 cut(s) 4, 91, 99
Mph1103I ATGCAT 1 cut(s) 264
MseI TTAA 1 cut(s) 99
MspCI CTTAAG 1 cut(s) 98
MspI CCGG 2 cut(s) 5, 325
MspR9I CCNGG 1 cut(s) 325
NciI CCSGG 1 cut(s) 325
NlaIII CATG 1 cut(s) 266
NlaIV GGNNCC 1 cut(s) 49
NsiI ATGCAT 1 cut(s) 264
NspI RCATGY 1 cut(s) 266
PspN4I GGNNCC 1 cut(s) 49
PspPI GGNCC 2 cut(s) 59, 123
RsaI GTAC 1 cut(s) 273
RsaNI GTAC 1 cut(s) 272
SaqAI TTAA 1 cut(s) 99
Sau96I GGNCC 2 cut(s) 59, 123
ScrFI CCNGG 1 cut(s) 325
SetI ASST 6 cut(s) 38, 71, 157, 229, 283, 312
SfcI CTRYAG 1 cut(s) 282
SgeI CNNG 8 cut(s) 17, 46, 160, 214, 275, 290, 336, 337
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 2 cut(s) 186, 221
StyD4I CCNGG 1 cut(s) 323
TaaI ACNGT 2 cut(s) 88, 208
TasI AATT 2 cut(s) 186, 221
TatI WGTACW 1 cut(s) 271
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TscAI CASTG 1 cut(s) 213
TspDTI ATGAA 1 cut(s) 174
TspRI CASTG 1 cut(s) 213
Vha464I CTTAAG 1 cut(s) 98
XapI RAATTY 1 cut(s) 186
XceI RCATGY 1 cut(s) 266
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.