Rorug06G0497600

May serve as docking site to facilitate the association of other proteins to the plasma membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0009060
Physical Location & Seq
Reverse (-)
61368125 .. 61373570
5446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0497600.1

Sequence Viewer

Length: 2142 bp
ATGGCCCTGAGACGCCTGCTCACTCAGGTATCTAAGCATCGATCAGAGTTGGGACAGCTGAAACAAGTTGTTTCTAGAACATATTTTCCGGTCAACAGGGTTGCTGGAGGGAATACAATTTTTAATACTCAAGAGAGGTGTCAGTCAAGCTATGTGCGCAATTTGGCTCGCAGAGGACGTGATGTTGATGAAGCTAATGAACTTGCCTATCTAAAAGAACTGTCCATGCGAAATGACCCTGAAGAAGTGATAAGATTATTTGAAAGTCAACCATCATTGCATTCCAACTCTTCAGCGCTTTCAGAATATGTGAAAGCATTGGTAAAAGTTGGCAGGCTGGATGAGAGTGAGTTACTGAAGACATTGCAGAGAGGTGTATCCAACTCTGCAAGGGAGGATGAAAGCATGGGTGGCTTCTCAGTTCTTAGGAACGTTGGGAAGTCTACAAAAGATGGCGTTCTTGGAACTGCAAGTGCACCTATTCATATGGTGGCTAGAGAAGGAGGTCATTTTAAAGAGCAGCTGTGGCGTACAGTTCGCACAATTGCACTAGCCTTTCTTTTGATATCTGGCGTTGGAGCACTCATTGAGGATAGAGGAATAAGCAAAGGACTTGGATTAAATGAAGAGGTCCAACCTAGCATGGAATCTAGCACTAAGTTTAGCGATGTCAAAGGAGTTGATGAGGCTAAGGCGGAGCTAGAAGAAATTGTTCACTATCTTCGAGATCCCAAGCGTTTCACTCGTCTTGGTGGCAAGCTACCAAAGGGTGTTTTGCTTGTTGGCCCACCTGGCACTGGAAAGACAATGTTAGCAAGAGCAATTGCCGGAGAAGCAGGGGTACCTTTCTTTTCATGCAGTGGCAGTGAATTTGAAGAGATGTTTGTTGGCGTTGGAGCTCGAAGGGTGAGGGATCTCTTTGCAGCTGCAAAGAAGCGGTCACCGTGTATTATATTTATTGATGAGATAGATGCTATAGGAGGAAGTCGCAACCCAAAGGATCAGCAGTACATGAAGATGACTCTGAATCAGTTACTTGTTGAACTTGATGGTTTTAAACAAAATGAAGGAATTATTGTTATTGCCGCTACTAATTTCCCCGAGTCACTGGACAAGGCATTGGTGAGACCTGGACGGTTTGATCGCCACATTGTTGTTCCCAATCCTGATGTTGAAGGGCGGAGGCAGATTATGGAAGTTCACATGTCTAAGGTTATGAAGGCTGATGATGTTGATTTGATGATCATTGCTAGAGGAACTCCTGGGTTCTCCGGTGCTGATCTGGCCAACTTGATCAACGTAGCTGCTCTTAAGGCTGCCATGGATGGCGCTAAAGCAGTGAGTATGGCTGATCTGGAGTATGCAAAAGACAAGATTATGATGGGAAGTGAGCGAAAGTCAGCTGTCATATCTGATGAGTCACGAAAGCTAACAGCTTTTCATGAGGGTGGCCATGCACTTGTGGCTGTTCACACTGATGGTGCTCATCCAGTTCACAAGGCAACAATAGTTCCCCGTGGTATGGCACTTGGCATGGTTGCCCAGTTGCCCGAAAAGGATGAGACAAGTGTCTCACGGAAACAGATGCTTGCGCGGCTTGATGTTTGCATGGGGGGACGGGTTGCAGAAGAGCTCATCTTTGGTGAAAGTGAAGTAACTTCTGGTGCTTCTGACGATCTCCGGCAAGCAACTGCTCTTGCCAGAGCAATGGTTACAAAGTATGGTATGAGCAAAGAAGTGGGGCTTGTCACCCACAATTATGACGACAATGGGAAGAGCATGAGCACAGAAACTAGGCTGCTTATTGAAGAAGAAGTGAAGCACCTCTTGGAAACGGCTTACAACAATGCAAAGAATATACTTACCACACATCACAAGGAGCTCCATGCTCTTGCTAATGCCTTATTGGAGCAAGAGACACTCACCGGAAAACAGATCAAGGTCTTGCTTGCTAACGTAAACTCTCAGCAGAACCAACAACCGCAACAGCAAGTTGTTGCAGAAACGTCACAGTCAAAACCAGTGCCGCCTCCATCACCACCCAATGCAGCTCAGTCTGCTGCAGCAGCAGCAGCAGCCGCCGCGGCCGCCGCTGCAACTGCTGCAGCCAAATCAAAAGGCATGGCTCCTGTGGGATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rad60-SLD_2

Protein Analysis

713

Amino Acids

77.09

Weight (kDa)

8.39

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIP49 PF06068 203 - 291 5.4e-06 TIP49 P-loop domain
AAA_5 PF07728 257 - 327 4.3e-06 AAA domain (dynein-related subfamily)
AAA PF00004 258 - 387 3.8e-46 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 410 - 453 5.4e-12 AAA+ lid domain
Peptidase_M41 PF01434 469 - 647 2.9e-67 Peptidase family M41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 158
Acc65I GGTACC 1 cut(s) 841
AccB1I GGYRCC 1 cut(s) 841
AccI GTMKAC 1 cut(s) 443
AccII CGCG 2 cut(s) 1594, 2084
AclI AACGTT 1 cut(s) 432
AclWI GGATC 3 cut(s) 722, 921, 1008
AcoI YGGCCR 3 cut(s) 1284, 1450, 2085
AcsI RAATTY 1 cut(s) 869
AcuI CTGAAG 3 cut(s) 261, 276, 377
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 3 cut(s) 532, 843, 1010
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 2 cut(s) 797, 1522
AflII CTTAAG 1 cut(s) 1310
AflIII ACRYGT 1 cut(s) 1203
AgsI TTSAA 5 cut(s) 263, 875, 1043, 1175, 1808
AjiI CACGTC 1 cut(s) 179
AjnI CCWGG 3 cut(s) 790, 1129, 1261
AjuI GAANNNNNNNTTGG 2 cut(s) 1811, 1843
AloI GAACNNNNNNTCC 2 cut(s) 70, 102
Alw21I GWGCWC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
Alw26I GTCTC 5 cut(s) 4, 1120, 1556, 1576, 1910
Alw44I GTGCAC 1 cut(s) 474
AlwI GGATC 3 cut(s) 722, 921, 1008
Ama87I CYCGRG 1 cut(s) 1100
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 5 cut(s) 3, 784, 1284, 1450, 2085
ApaLI GTGCAC 1 cut(s) 474
ApoI RAATTY 1 cut(s) 869
ArsI GACNNNNNNTTYG 2 cut(s) 923, 955
Asp700I GAANNNNTTC 1 cut(s) 711
Asp718I GGTACC 1 cut(s) 841
AspLEI GCGC 4 cut(s) 159, 298, 1331, 1594
AspS9I GGNCC 3 cut(s) 4, 631, 785
AsuHPI GGTGA 7 cut(s) 919, 933, 1135, 1655, 1741, 1915, 2028
AvaI CYCGRG 1 cut(s) 1100
AvaII GGWCC 1 cut(s) 631
BaeGI GKGCMC 1 cut(s) 478
BaeI ACNNNNGTAYC 2 cut(s) 12, 45
BalI TGGCCA 2 cut(s) 1286, 1452
BanI GGYRCC 1 cut(s) 841
BanII GRGCYC 3 cut(s) 901, 1635, 1884
BarI GAAGNNNNNNTAC 2 cut(s) 825, 857
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
BccI CCATC 7 cut(s) 280, 446, 1043, 1319, 1375, 1472, 2041
BceAI ACGGC 1 cut(s) 1851
BciT130I CCWGG 3 cut(s) 792, 1131, 1263
BciVI GTATCC 1 cut(s) 388
BclI TGATCA 2 cut(s) 1242, 1293
BcoDI GTCTC 5 cut(s) 4, 1120, 1556, 1576, 1910
BfaI CTAG 8 cut(s) 75, 495, 551, 639, 651, 701, 1251, 1794
BfmI CTRYAG 3 cut(s) 975, 2061, 2103
BfoI RGCGCY 2 cut(s) 299, 1332
BfrI CTTAAG 1 cut(s) 1310
BfuI GTATCC 1 cut(s) 388
BglI GCCNNNNNGGC 2 cut(s) 792, 2084
Bme1390I CCNGG 3 cut(s) 792, 1131, 1263
Bme18I GGWCC 1 cut(s) 631
BmeT110I CYCGRG 1 cut(s) 1100
BmgBI CACGTC 1 cut(s) 179
BmgT120I GGNCC 3 cut(s) 4, 631, 785
BmiI GGNNCC 2 cut(s) 843, 2127
BmrFI CCNGG 3 cut(s) 792, 1131, 1263
BmrI ACTGGG 1 cut(s) 1537
BmsI GCATC 3 cut(s) 46, 961, 1575
BmuI ACTGGG 1 cut(s) 1537
BoxI GACNNNNGTC 1 cut(s) 1568
BpiI GAAGAC 1 cut(s) 365
BpmI CTGGAG 2 cut(s) 126, 1376
Bpu10I CCTNAGC 1 cut(s) 690
BpuEI CTTGAG 1 cut(s) 114
Bsa29I ATCGAT 1 cut(s) 40
BsaHI GRCGYC 1 cut(s) 13
BsaI GGTCTC 1 cut(s) 1120
BsaJI CCNNGG 4 cut(s) 1262, 1320, 1516, 2082
BsaWI WCCGGW 3 cut(s) 88, 1271, 1925
Bsc4I CCNNNNNNNGG 2 cut(s) 797, 1522
Bse1I ACTGG 5 cut(s) 802, 1113, 1490, 1543, 2021
Bse3DI GCAATG 4 cut(s) 275, 362, 1245, 1713
BseBI CCWGG 3 cut(s) 792, 1131, 1263
BseCI ATCGAT 1 cut(s) 40
BseDI CCNNGG 4 cut(s) 1262, 1320, 1516, 2082
BseGI GGATG 5 cut(s) 346, 403, 1330, 1486, 1564
BseLI CCNNNNNNNGG 2 cut(s) 797, 1522
BseMI GCAATG 4 cut(s) 275, 362, 1245, 1713
BseMII CTCAG 4 cut(s) 38, 432, 1979, 2066
BseNI ACTGG 5 cut(s) 802, 1113, 1490, 1543, 2021
BseSI GKGCMC 1 cut(s) 478
BseX3I CGGCCG 1 cut(s) 2085
Bsh1236I CGCG 2 cut(s) 1594, 2084
Bsh1285I CGRYCG 1 cut(s) 2088
BshFI GGCC 5 cut(s) 5, 786, 1286, 1452, 2087
BshNI GGYRCC 1 cut(s) 841
BshVI ATCGAT 1 cut(s) 40
BsiEI CGRYCG 1 cut(s) 2088
BsiHKAI GWGCWC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
BsiHKCI CYCGRG 1 cut(s) 1100
BsiSI CCGG 5 cut(s) 89, 828, 1272, 1681, 1926
BslFI GGGAC 2 cut(s) 66, 1629
BslI CCNNNNNNNGG 2 cut(s) 797, 1522
BsmAI GTCTC 5 cut(s) 4, 1120, 1556, 1576, 1910
BsmBI CGTCTC 1 cut(s) 4
BsmFI GGGAC 2 cut(s) 66, 1629
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 5 cut(s) 5, 786, 1286, 1452, 2087
Bso31I GGTCTC 1 cut(s) 1120
BsoBI CYCGRG 1 cut(s) 1100
Bsp1286I GDGCHC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
Bsp19I CCATGG 1 cut(s) 1320
BspANI GGCC 5 cut(s) 5, 786, 1286, 1452, 2087
BspCNI CTCAG 4 cut(s) 37, 431, 1978, 2065
BspDI ATCGAT 1 cut(s) 40
BspFNI CGCG 2 cut(s) 1594, 2084
BspHI TCATGA 1 cut(s) 1441
BspLI GGNNCC 2 cut(s) 843, 2127
BspMAI CTGCAG 2 cut(s) 2065, 2107
BspPI GGATC 3 cut(s) 722, 921, 1008
BspQI GCTCTTC 2 cut(s) 1623, 1769
BspT107I GGYRCC 1 cut(s) 841
BspTI CTTAAG 1 cut(s) 1310
BspTNI GGTCTC 1 cut(s) 1120
BsrDI GCAATG 4 cut(s) 275, 362, 1245, 1713
BsrI ACTGG 5 cut(s) 802, 1113, 1490, 1543, 2021
BssECI CCNNGG 4 cut(s) 1262, 1320, 1516, 2082
BssNI GRCGYC 1 cut(s) 13
BssT1I CCWWGG 1 cut(s) 1320
Bst2UI CCWGG 3 cut(s) 792, 1131, 1263
Bst4CI ACNGT 5 cut(s) 222, 535, 945, 1137, 2013
Bst6I CTCTTC 5 cut(s) 295, 621, 870, 1623, 1769
BstACI GRCGYC 1 cut(s) 13
BstAFI CTTAAG 1 cut(s) 1310
BstAPI GCANNNNNTGC 1 cut(s) 2102
BstC8I GCNNGC 7 cut(s) 17, 169, 335, 758, 1590, 1686, 1950
BstDSI CCRYGG 3 cut(s) 1320, 1516, 2082
BstEII GGTNACC 1 cut(s) 939
BstF5I GGATG 5 cut(s) 346, 403, 1330, 1486, 1564
BstFNI CGCG 2 cut(s) 1594, 2084
BstH2I RGCGCY 2 cut(s) 299, 1332
BstHHI GCGC 4 cut(s) 159, 298, 1331, 1594
BstMAI GTCTC 5 cut(s) 4, 1120, 1556, 1576, 1910
BstMCI CGRYCG 1 cut(s) 2088
BstNI CCWGG 3 cut(s) 792, 1131, 1263
BstNSI RCATGY 1 cut(s) 1207
BstPAI GACNNNNGTC 1 cut(s) 1568
BstPI GGTNACC 1 cut(s) 939
BstSCI CCNGG 3 cut(s) 790, 1129, 1261
BstSFI CTRYAG 3 cut(s) 975, 2061, 2103
BstSLI GKGCMC 1 cut(s) 478
BstUI CGCG 2 cut(s) 1594, 2084
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 3 cut(s) 727, 913, 2135
BstXI CCANNNNNNTGG 1 cut(s) 1708
BstYI RGATCY 3 cut(s) 727, 913, 2135
BstZI CGGCCG 1 cut(s) 2085
Bsu15I ATCGAT 1 cut(s) 40
BsuI GTATCC 1 cut(s) 388
BsuRI GGCC 5 cut(s) 5, 786, 1286, 1452, 2087
BsuTUI ATCGAT 1 cut(s) 40
BtgI CCRYGG 3 cut(s) 1320, 1516, 2082
BtgZI GCGATG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 179
BtsCI GGATG 5 cut(s) 346, 403, 1330, 1486, 1564
BtsI GCAGTG 3 cut(s) 865, 871, 1344
BtsIMutI CAGTG 7 cut(s) 795, 865, 871, 1106, 1344, 1473, 2028
Cac8I GCNNGC 7 cut(s) 17, 169, 335, 758, 1590, 1686, 1950
CciI TCATGA 1 cut(s) 1441
CciNI GCGGCCGC 1 cut(s) 2085
CfoI GCGC 4 cut(s) 159, 298, 1331, 1594
Cfr13I GGNCC 3 cut(s) 4, 631, 785
Cfr42I CCGCGG 1 cut(s) 2085
ClaI ATCGAT 1 cut(s) 40
CseI GACGC 1 cut(s) 21
Csp6I GTAC 3 cut(s) 531, 842, 1009
CviQI GTAC 3 cut(s) 531, 842, 1009
DraI TTTAAA 2 cut(s) 514, 1057
EaeI YGGCCR 3 cut(s) 1284, 1450, 2085
EagI CGGCCG 1 cut(s) 2085
Eam1104I CTCTTC 5 cut(s) 295, 621, 870, 1623, 1769
EarI CTCTTC 5 cut(s) 295, 621, 870, 1623, 1769
EciI GGCGGA 2 cut(s) 710, 1195
Ecl136II GAGCTC 3 cut(s) 899, 1633, 1882
EclXI CGGCCG 1 cut(s) 2085
Eco130I CCWWGG 1 cut(s) 1320
Eco24I GRGCYC 3 cut(s) 901, 1635, 1884
Eco31I GGTCTC 1 cut(s) 1120
Eco32I GATATC 1 cut(s) 567
Eco47I GGWCC 1 cut(s) 631
Eco47III AGCGCT 1 cut(s) 297
Eco52I CGGCCG 1 cut(s) 2085
Eco53kI GAGCTC 3 cut(s) 899, 1633, 1882
Eco57I CTGAAG 3 cut(s) 261, 276, 377
Eco88I CYCGRG 1 cut(s) 1100
Eco91I GGTNACC 1 cut(s) 939
EcoICRI GAGCTC 3 cut(s) 899, 1633, 1882
EcoO65I GGTNACC 1 cut(s) 939
EcoRII CCWGG 3 cut(s) 790, 1129, 1261
EcoRV GATATC 1 cut(s) 567
EcoT14I CCWWGG 1 cut(s) 1320
EcoT38I GRGCYC 3 cut(s) 901, 1635, 1884
ErhI CCWWGG 1 cut(s) 1320
Esp3I CGTCTC 1 cut(s) 4
FalI AAGNNNNNCTT 4 cut(s) 1728, 1760, 1811, 1843
FaqI GGGAC 2 cut(s) 66, 1629
FauNDI CATATG 1 cut(s) 486
FbaI TGATCA 2 cut(s) 1242, 1293
FblI GTMKAC 1 cut(s) 443
FokI GGATG 5 cut(s) 353, 410, 1337, 1473, 1571
FriOI GRGCYC 3 cut(s) 901, 1635, 1884
FspBI CTAG 8 cut(s) 75, 495, 551, 639, 651, 701, 1251, 1794
FspI TGCGCA 1 cut(s) 158
GlaI GCGC 4 cut(s) 158, 297, 1330, 1593
GsuI CTGGAG 2 cut(s) 126, 1376
HaeII RGCGCY 2 cut(s) 299, 1332
HaeIII GGCC 5 cut(s) 5, 786, 1286, 1452, 2087
HapII CCGG 5 cut(s) 89, 828, 1272, 1681, 1926
HgaI GACGC 1 cut(s) 21
HhaI GCGC 4 cut(s) 159, 298, 1331, 1594
Hin1I GRCGYC 1 cut(s) 13
Hin6I GCGC 4 cut(s) 157, 296, 1329, 1592
HinP1I GCGC 4 cut(s) 157, 296, 1329, 1592
HincII GTYRAC 2 cut(s) 94, 269
HindII GTYRAC 2 cut(s) 94, 269
HinfI GANTC 5 cut(s) 647, 1021, 1027, 1103, 1418
HpaII CCGG 5 cut(s) 89, 828, 1272, 1681, 1926
HphI GGTGA 7 cut(s) 919, 933, 1135, 1655, 1741, 1915, 2028
Hpy166II GTNNAC 9 cut(s) 94, 269, 444, 476, 715, 1201, 1471, 1495, 1960
Hpy188I TCNGA 5 cut(s) 46, 304, 1026, 1414, 1672
Hpy188III TCNNGA 7 cut(s) 75, 131, 725, 1166, 1355, 1422, 1442
Hpy8I GTNNAC 9 cut(s) 94, 269, 444, 476, 715, 1201, 1471, 1495, 1960
HpyAV CCTTC 5 cut(s) 494, 897, 1061, 1169, 1213
HpyCH4III ACNGT 5 cut(s) 222, 535, 945, 1137, 2013
HpyCH4IV ACGT 5 cut(s) 178, 432, 1299, 1956, 2006
HpySE526I ACGT 5 cut(s) 178, 432, 1299, 1956, 2006
Hsp92I GRCGYC 1 cut(s) 13
HspAI GCGC 4 cut(s) 157, 296, 1329, 1592
KpnI GGTACC 1 cut(s) 845
Ksp22I TGATCA 2 cut(s) 1242, 1293
KspI CCGCGG 1 cut(s) 2085
LguI GCTCTTC 2 cut(s) 1623, 1769
LmnI GCTCC 7 cut(s) 578, 697, 896, 1879, 1887, 1909, 2131
LweI GCATC 3 cut(s) 46, 961, 1575
MaeI CTAG 8 cut(s) 75, 495, 551, 639, 651, 701, 1251, 1794
MaeII ACGT 5 cut(s) 178, 432, 1299, 1956, 2006
MaeIII GTNAC 9 cut(s) 351, 939, 1032, 1104, 1419, 1654, 1711, 1747, 2007
MfeI CAATTG 2 cut(s) 543, 822
MflI RGATCY 3 cut(s) 727, 913, 2135
MhlI GDGCHC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
MlsI TGGCCA 2 cut(s) 1286, 1452
MluCI AATT 9 cut(s) 117, 160, 543, 708, 822, 869, 1071, 1093, 1756
MluNI TGGCCA 2 cut(s) 1286, 1452
MlyI GAGTC 3 cut(s) 1015, 1112, 1427
MmeI TCCRAC 5 cut(s) 309, 405, 556, 658, 874
Mox20I TGGCCA 2 cut(s) 1286, 1452
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 2 cut(s) 1286, 1452
MseI TTAA 5 cut(s) 123, 513, 620, 1056, 1311
MslI CAYNNNNRTG 4 cut(s) 1016, 1446, 1476, 1758
Msp20I TGGCCA 2 cut(s) 1286, 1452
MspA1I CMGCKG 6 cut(s) 58, 523, 926, 1403, 2084, 2093
MspCI CTTAAG 1 cut(s) 1310
MspI CCGG 5 cut(s) 89, 828, 1272, 1681, 1926
MspR9I CCNGG 3 cut(s) 792, 1131, 1263
MunI CAATTG 2 cut(s) 543, 822
Mva1269I GAATGC 1 cut(s) 280
MvaI CCWGG 3 cut(s) 792, 1131, 1263
MvnI CGCG 2 cut(s) 1594, 2084
NcoI CCATGG 1 cut(s) 1320
NdeI CATATG 1 cut(s) 486
NlaIV GGNNCC 2 cut(s) 843, 2127
NmuCI GTSAC 5 cut(s) 939, 1104, 1419, 1747, 2007
NotI GCGGCCGC 1 cut(s) 2085
NsbI TGCGCA 1 cut(s) 158
NspI RCATGY 1 cut(s) 1207
PagI TCATGA 1 cut(s) 1441
PciI ACATGT 1 cut(s) 1203
PciSI GCTCTTC 2 cut(s) 1623, 1769
PcsI WCGNNNNNNNCGW 1 cut(s) 175
PctI GAATGC 1 cut(s) 280
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 2 cut(s) 647, 1027
PleI GAGTC 3 cut(s) 1015, 1111, 1426
PpsI GAGTC 3 cut(s) 1015, 1111, 1426
PscI ACATGT 1 cut(s) 1203
PshAI GACNNNNGTC 1 cut(s) 1568
Psp124BI GAGCTC 3 cut(s) 901, 1635, 1884
Psp1406I AACGTT 1 cut(s) 432
Psp6I CCWGG 3 cut(s) 790, 1129, 1261
PspEI GGTNACC 1 cut(s) 939
PspGI CCWGG 3 cut(s) 790, 1129, 1261
PspN4I GGNNCC 2 cut(s) 843, 2127
PspPI GGNCC 3 cut(s) 4, 631, 785
PstI CTGCAG 2 cut(s) 2065, 2107
PsuI RGATCY 3 cut(s) 727, 913, 2135
PvuII CAGCTG 4 cut(s) 58, 523, 926, 1403
RsaI GTAC 3 cut(s) 532, 843, 1010
RsaNI GTAC 3 cut(s) 531, 842, 1009
RseI CAYNNNNRTG 4 cut(s) 1016, 1446, 1476, 1758
SacI GAGCTC 3 cut(s) 901, 1635, 1884
SacII CCGCGG 1 cut(s) 2085
SapI GCTCTTC 2 cut(s) 1623, 1769
SaqAI TTAA 5 cut(s) 123, 513, 620, 1056, 1311
Sau96I GGNCC 3 cut(s) 4, 631, 785
SchI GAGTC 3 cut(s) 1015, 1112, 1427
ScrFI CCNGG 3 cut(s) 792, 1131, 1263
SduI GDGCHC 7 cut(s) 478, 583, 901, 1486, 1635, 1787, 1884
SfaNI GCATC 3 cut(s) 46, 961, 1575
SfcI CTRYAG 3 cut(s) 975, 2061, 2103
Sfr303I CCGCGG 1 cut(s) 2085
SgrBI CCGCGG 1 cut(s) 2085
SinI GGWCC 1 cut(s) 631
SmiMI CAYNNNNRTG 4 cut(s) 1016, 1446, 1476, 1758
SmlI CTYRAG 2 cut(s) 129, 1310
SmoI CTYRAG 2 cut(s) 129, 1310
Sse9I AATT 9 cut(s) 117, 160, 543, 708, 822, 869, 1071, 1093, 1756
SspMI CTAG 8 cut(s) 75, 495, 551, 639, 651, 701, 1251, 1794
SstI GAGCTC 3 cut(s) 901, 1635, 1884
StyD4I CCNGG 3 cut(s) 790, 1129, 1261
StyI CCWWGG 1 cut(s) 1320
TaaI ACNGT 5 cut(s) 222, 535, 945, 1137, 2013
TaiI ACGT 5 cut(s) 181, 435, 1302, 1959, 2009
TaqI TCGA 3 cut(s) 40, 724, 901
TasI AATT 9 cut(s) 117, 160, 543, 708, 822, 869, 1071, 1093, 1756
TatI WGTACW 1 cut(s) 1008
TauI GCSGC 8 cut(s) 1088, 1597, 2029, 2081, 2084, 2087, 2090, 2093
TfiI GAWTC 2 cut(s) 647, 1027
Tru1I TTAA 5 cut(s) 123, 513, 620, 1056, 1311
Tru9I TTAA 5 cut(s) 123, 513, 620, 1056, 1311
TscAI CASTG 7 cut(s) 802, 865, 871, 1113, 1344, 1480, 2028
TseFI GTSAC 5 cut(s) 939, 1104, 1419, 1747, 2007
Tsp45I GTSAC 5 cut(s) 939, 1104, 1419, 1747, 2007
TspGWI ACGGA 1 cut(s) 1591
TspRI CASTG 7 cut(s) 802, 865, 871, 1113, 1344, 1480, 2028
Vha464I CTTAAG 1 cut(s) 1310
VneI GTGCAC 1 cut(s) 474
VpaK11BI GGWCC 1 cut(s) 631
XapI RAATTY 1 cut(s) 869
XbaI TCTAGA 1 cut(s) 74
XceI RCATGY 1 cut(s) 1207
XmiI GTMKAC 1 cut(s) 443
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 8 cut(s) 75, 495, 551, 639, 651, 701, 1251, 1794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.