Prupe.5G147400_v2.0.a1

DEK C terminal domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
13522608 .. 13527593
4986 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G147400.2

Sequence Viewer

Length: 1755 bp
ATGGCGACCGAAGCCCTAGAGGACAAGAAACCGGAAGACGAAGCTCCTCTTGAAGAGAAGCAAGAGGCTGAAGCCGAAGTGGAGCCTAAGGAAGAACAAGAAGAACAAGAGAAGGAGGAAGAAAAGGAGGAAGAGAAGGAGAATGTTCCGGAAGCTTCGGAGAAAGTGACTGAAAACGAGGAAGAGCAAGTTGGTGAAGAAGGCGAAGAGGAGAAAGAGAAAGAAAGTGAAGAAACTCCGAAGAAGGCGAAGAGGGGCCGAAAAACTAGCTCCAAAAAGGAGGAGAAGGACCAGACCGAGCCCAAGAAGCGGGGACGAGACTCGTCAGGGAAGAAGTCGAGTAAAGAAGCTGAGGCGGAGAAGAAGGAGAAGGAGCCGGTAACGCCGGTGAGTGAGAGGCCCACAAGGGAGAGGAAAATAGTTGAGCGCTACTCAGCTCCTGAGAGTGGAAGGTCTTCGGCGAATAAAGCTTTGAACATTGAGAAGGGTCGCGGTACAGAACTTAAGAACATTCCAAACGTGGCTTTCAAGTTGTCAAAGCGAAAAATTGATGACAACCTGCAATTACTTCACACAATTCTCTTTGGGAAAAAAGCAAAGGCTCATAATTTGAAGAAGAATATAAGTCAGTTTTCAGGTTATGTGTGGACTGAGAATGAGCAGGAAAAACAGAGGACAAGGGTAAAGGAGAAGCTTGATAAGTGCGTTAAAGAAAAGTTAGTGGATTTTTGTGAGTTTCTTAATATTCCGATTAAGGCTGGTACAAAGAAGGAGGAGCTTTCTGTTAAGTTACTGGAGTTTTTGGAATCCCCACATGTCACAACTGATGTTTTGCTTGCTGAAAAGGAACAGAAAGGGCAAAAGCGGAGGAGGAAGGTTACACCAAGTAAGATGGCAGGTTCTGGAGAAGCATCACCAGAAACATCAGCCAAGAAACAAAAAGAAATACCCAATGTTGAAAAAAAGCAGGAGTCGTCCAAGGCTGAAGAAGAGGAGGGCGATGACAATGATGAAACTTCAGATGCAAAGGACAATTCTGTTGGAGATGATGATCACAATACGATGGATGAGGATACAGACCATGAGGATAAATCCGATGAAGAGCAAGACGAACCAAAGGACCAGGTCTCAAGTCCAAAAAGTTCATCCAAAAAGGTTGTAAAGGAGGGATCAAAGGTTAAAGCTGGGAGCAAAACAACATCTGCTAAGAAGAAAACCCCTGCAAAATCTGCGAAAACACCTTCGGATTCTGCAAAGAAATCTAGTTCTACTTCAAAAAGAGGTGCAAGTGATGCCGATGGAGCTTCTGGCTCACAGACTAAAGCAAAGCGATCTGCAAAGAAACAAAAGACTGAAAAGGAAAGCCAGAAGGATGTCAAGGAAAAAGCCAGTGGCAAGAAACAAACGAGCAAGTCCCCGGCCAAGGTTTCGGCAAAGGATCAAGCGAAAGGAAAAACTAGCAAGAAAGCAAAGGCAGAGCCCACGAAAGATGATATGCATGCAGTAATTGTTGATATTCTGAAAGAAGTGGACTTCAATACTGCAACTTTATCAGACATTCTCAGGCAACTTGGTACCCACTTCGGTATTGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGAAGTAATTAACAATATGTCTGATGAGGAAGATGAAGGGGATGAAGCAGAGGAGGAAGCTGAAGCTGGTGATGATGCCGACAAAGATGAAGAAAAGGACGACAACGACGAAGATGATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

585

Amino Acids

65.16

Weight (kDa)

5.22

Isoelectric Point (pI)

57.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 567, 887
Acc65I GGTACC 1 cut(s) 1574
AccB1I GGYRCC 1 cut(s) 1574
AccII CGCG 1 cut(s) 492
AccIII TCCGGA 1 cut(s) 148
AciI CCGC 4 cut(s) 310, 356, 492, 865
AclWI GGATC 2 cut(s) 1177, 1446
AcoI YGGCCR 1 cut(s) 1419
AcuI CTGAAG 4 cut(s) 90, 1002, 1005, 1713
AfaI GTAC 3 cut(s) 496, 763, 1576
AfeI AGCGCT 1 cut(s) 428
AfiI CCNNNNNNNGG 3 cut(s) 309, 446, 1423
AflII CTTAAG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 814
AgsI TTSAA 7 cut(s) 53, 475, 529, 613, 959, 1275, 1537
AjnI CCWGG 1 cut(s) 1122
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
Alw26I GTCTC 2 cut(s) 312, 1132
AlwI GGATC 2 cut(s) 1177, 1446
AlwNI CAGNNNCTG 2 cut(s) 440, 902
Aor13HI TCCGGA 1 cut(s) 148
Aor51HI AGCGCT 1 cut(s) 428
AoxI GGCC 3 cut(s) 256, 398, 1419
Asp700I GAANNNNTTC 1 cut(s) 454
Asp718I GGTACC 1 cut(s) 1574
AspLEI GCGC 1 cut(s) 429
AspS9I GGNCC 4 cut(s) 256, 289, 399, 1120
AsuC2I CCSGG 1 cut(s) 1418
AsuHPI GGTGA 5 cut(s) 206, 400, 906, 1627, 1712
AvaII GGWCC 2 cut(s) 289, 1120
AxyI CCTNAGG 1 cut(s) 87
BanI GGYRCC 1 cut(s) 1574
BanII GRGCYC 2 cut(s) 303, 1482
BbsI GAAGAC 2 cut(s) 42, 447
BbvCI CCTCAGC 1 cut(s) 351
BccI CCATC 3 cut(s) 886, 1057, 1292
BcgI CGANNNNNNTGC 1 cut(s) 1730
BciT130I CCWGG 1 cut(s) 1124
BciVI GTATCC 1 cut(s) 1066
BclI TGATCA 1 cut(s) 1051
BcnI CCSGG 1 cut(s) 1418
BcoDI GTCTC 2 cut(s) 312, 1132
BfaI CTAG 4 cut(s) 17, 267, 1263, 1458
BfoI RGCGCY 1 cut(s) 430
BfrI CTTAAG 1 cut(s) 503
BfuAI ACCTGC 2 cut(s) 567, 887
BfuI GTATCC 1 cut(s) 1066
Bme1390I CCNGG 2 cut(s) 1124, 1418
Bme18I GGWCC 2 cut(s) 289, 1120
BmgT120I GGNCC 4 cut(s) 256, 289, 399, 1120
BmiI GGNNCC 4 cut(s) 84, 257, 375, 1576
BmrFI CCNGG 2 cut(s) 1124, 1418
BmsI GCATC 5 cut(s) 920, 1012, 1282, 1696, 1738
BpiI GAAGAC 2 cut(s) 42, 447
BplI GAGNNNNNCTC 2 cut(s) 416, 448
BpmI CTGGAG 2 cut(s) 815, 924
Bpu10I CCTNAGC 1 cut(s) 351
BpuEI CTTGAG 1 cut(s) 1114
BpuMI CCSGG 1 cut(s) 1418
BsaBI GATNNNNATC 1 cut(s) 1050
BsaI GGTCTC 1 cut(s) 1132
BsaJI CCNNGG 3 cut(s) 978, 1416, 1422
BsaWI WCCGGW 2 cut(s) 31, 148
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 446, 1423
Bse118I RCCGGY 2 cut(s) 376, 385
Bse1I ACTGG 2 cut(s) 798, 1389
Bse21I CCTNAGG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 1050
BseAI TCCGGA 1 cut(s) 148
BseBI CCWGG 1 cut(s) 1124
BseDI CCNNGG 3 cut(s) 978, 1416, 1422
BseGI GGATG 4 cut(s) 1072, 1145, 1378, 1678
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 3 cut(s) 309, 446, 1423
BseMII CTCAG 5 cut(s) 342, 432, 447, 642, 1576
BseNI ACTGG 2 cut(s) 798, 1389
BseRI GAGGAG 7 cut(s) 36, 224, 296, 788, 883, 1007, 1697
BseYI CCCAGC 1 cut(s) 1184
Bsh1236I CGCG 1 cut(s) 492
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 3 cut(s) 258, 400, 1421
BshNI GGYRCC 1 cut(s) 1574
BsiEI CGRYCG 1 cut(s) 9
BsiSI CCGG 5 cut(s) 32, 149, 377, 386, 1418
BslFI GGGAC 2 cut(s) 327, 1399
BslI CCNNNNNNNGG 3 cut(s) 309, 446, 1423
BsmAI GTCTC 2 cut(s) 312, 1132
BsmFI GGGAC 2 cut(s) 327, 1399
BsnI GGCC 3 cut(s) 258, 400, 1421
Bso31I GGTCTC 1 cut(s) 1132
Bsp1286I GDGCHC 2 cut(s) 303, 1482
Bsp13I TCCGGA 1 cut(s) 148
Bsp143I GATC 4 cut(s) 1051, 1169, 1331, 1438
BspACI CCGC 4 cut(s) 310, 356, 492, 865
BspANI GGCC 3 cut(s) 258, 400, 1421
BspCNI CTCAG 5 cut(s) 343, 433, 446, 643, 1575
BspEI TCCGGA 1 cut(s) 148
BspFNI CGCG 1 cut(s) 492
BspLI GGNNCC 4 cut(s) 84, 257, 375, 1576
BspMI ACCTGC 2 cut(s) 567, 887
BspPI GGATC 2 cut(s) 1177, 1446
BspQI GCTCTTC 2 cut(s) 177, 1095
BspT107I GGYRCC 1 cut(s) 1574
BspTI CTTAAG 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 1132
BsrFI RCCGGY 2 cut(s) 376, 385
BsrI ACTGG 2 cut(s) 798, 1389
BssAI RCCGGY 2 cut(s) 376, 385
BssECI CCNNGG 3 cut(s) 978, 1416, 1422
BssMI GATC 4 cut(s) 1051, 1169, 1331, 1438
BssT1I CCWWGG 2 cut(s) 978, 1422
Bst2UI CCWGG 1 cut(s) 1124
Bst6I CTCTTC 7 cut(s) 48, 126, 177, 201, 245, 984, 1095
BstAFI CTTAAG 1 cut(s) 503
BstAPI GCANNNNNTGC 2 cut(s) 1229, 1292
BstC8I GCNNGC 2 cut(s) 837, 1500
BstDEI CTNAG 8 cut(s) 87, 351, 433, 441, 651, 1206, 1562, 1752
BstF5I GGATG 4 cut(s) 1072, 1145, 1378, 1678
BstFNI CGCG 1 cut(s) 492
BstH2I RGCGCY 1 cut(s) 430
BstHHI GCGC 1 cut(s) 429
BstKTI GATC 4 cut(s) 1054, 1172, 1334, 1441
BstMAI GTCTC 2 cut(s) 312, 1132
BstMBI GATC 4 cut(s) 1051, 1169, 1331, 1438
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 7 cut(s) 11, 307, 382, 467, 1229, 1292, 1301
BstNI CCWGG 1 cut(s) 1124
BstNSI RCATGY 2 cut(s) 818, 1502
BstSCI CCNGG 2 cut(s) 1122, 1416
BstUI CGCG 1 cut(s) 492
BstV2I GAAGAC 2 cut(s) 42, 447
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 1 cut(s) 1066
BsuRI GGCC 3 cut(s) 258, 400, 1421
BtgZI GCGATG 1 cut(s) 1014
BtsCI GGATG 4 cut(s) 1072, 1145, 1378, 1678
BtsIMutI CAGTG 1 cut(s) 1396
BveI ACCTGC 2 cut(s) 567, 887
Cac8I GCNNGC 2 cut(s) 837, 1500
CaiI CAGNNNCTG 2 cut(s) 440, 902
CfoI GCGC 1 cut(s) 429
Cfr10I RCCGGY 2 cut(s) 376, 385
Cfr13I GGNCC 4 cut(s) 256, 289, 399, 1120
CsiI ACCWGGT 1 cut(s) 1122
Csp6I GTAC 3 cut(s) 495, 762, 1575
CviAII CATG 3 cut(s) 815, 1082, 1499
CviQI GTAC 3 cut(s) 495, 762, 1575
DdeI CTNAG 8 cut(s) 87, 351, 433, 441, 651, 1206, 1562, 1752
DpnI GATC 4 cut(s) 1053, 1171, 1333, 1440
DpnII GATC 4 cut(s) 1051, 1169, 1331, 1438
EaeI YGGCCR 1 cut(s) 1419
Eam1104I CTCTTC 7 cut(s) 48, 126, 177, 201, 245, 984, 1095
EarI CTCTTC 7 cut(s) 48, 126, 177, 201, 245, 984, 1095
EciI GGCGGA 1 cut(s) 371
Eco130I CCWWGG 2 cut(s) 978, 1422
Eco24I GRGCYC 2 cut(s) 303, 1482
Eco31I GGTCTC 1 cut(s) 1132
Eco47I GGWCC 2 cut(s) 289, 1120
Eco47III AGCGCT 1 cut(s) 428
Eco57I CTGAAG 4 cut(s) 90, 1002, 1005, 1713
Eco81I CCTNAGG 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 1122
EcoT14I CCWWGG 2 cut(s) 978, 1422
EcoT22I ATGCAT 2 cut(s) 1500, 1602
EcoT38I GRGCYC 2 cut(s) 303, 1482
ErhI CCWWGG 2 cut(s) 978, 1422
FaeI CATG 3 cut(s) 818, 1085, 1502
FalI AAGNNNNNCTT 2 cut(s) 33, 65
FaqI GGGAC 2 cut(s) 327, 1399
FatI CATG 3 cut(s) 814, 1081, 1498
FauI CCCGC 1 cut(s) 303
FbaI TGATCA 1 cut(s) 1051
FokI GGATG 4 cut(s) 1079, 1132, 1385, 1685
FriOI GRGCYC 2 cut(s) 303, 1482
FspBI CTAG 4 cut(s) 17, 267, 1263, 1458
GlaI GCGC 1 cut(s) 428
GsaI CCCAGC 1 cut(s) 1188
GsuI CTGGAG 2 cut(s) 815, 924
HaeII RGCGCY 1 cut(s) 430
HaeIII GGCC 3 cut(s) 258, 400, 1421
HapII CCGG 5 cut(s) 32, 149, 377, 386, 1418
HhaI GCGC 1 cut(s) 429
Hin1II CATG 3 cut(s) 818, 1085, 1502
Hin6I GCGC 1 cut(s) 427
HinP1I GCGC 1 cut(s) 427
HindIII AAGCTT 3 cut(s) 153, 468, 692
HinfI GANTC 4 cut(s) 320, 806, 971, 1247
HpaII CCGG 5 cut(s) 32, 149, 377, 386, 1418
HphI GGTGA 5 cut(s) 206, 400, 906, 1627, 1712
Hpy166II GTNNAC 2 cut(s) 648, 1531
Hpy188I TCNGA 9 cut(s) 160, 240, 750, 1021, 1096, 1246, 1521, 1555, 1654
Hpy188III TCNNGA 4 cut(s) 50, 149, 440, 903
Hpy8I GTNNAC 2 cut(s) 648, 1531
Hpy99I CGWCG 1 cut(s) 1742
HpyCH4IV ACGT 1 cut(s) 519
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 307, 382, 467, 1229, 1292, 1301
HpyF3I CTNAG 8 cut(s) 87, 351, 433, 441, 651, 1206, 1562, 1752
HpySE526I ACGT 1 cut(s) 519
Hsp92II CATG 3 cut(s) 818, 1085, 1502
HspAI GCGC 1 cut(s) 427
Kpn2I TCCGGA 1 cut(s) 148
KpnI GGTACC 1 cut(s) 1578
Ksp22I TGATCA 1 cut(s) 1051
Kzo9I GATC 4 cut(s) 1051, 1169, 1331, 1438
LguI GCTCTTC 2 cut(s) 177, 1095
LmnI GCTCC 8 cut(s) 49, 82, 275, 373, 442, 775, 1188, 1301
LweI GCATC 5 cut(s) 920, 1012, 1282, 1696, 1738
MabI ACCWGGT 1 cut(s) 1122
MaeI CTAG 4 cut(s) 17, 267, 1263, 1458
MaeII ACGT 1 cut(s) 519
MaeIII GTNAC 5 cut(s) 166, 379, 789, 817, 877
MalI GATC 4 cut(s) 1053, 1171, 1333, 1440
MboI GATC 4 cut(s) 1051, 1169, 1331, 1438
MhlI GDGCHC 2 cut(s) 303, 1482
MluCI AATT 8 cut(s) 546, 563, 576, 607, 1033, 1506, 1626, 1638
MlyI GAGTC 2 cut(s) 314, 980
MmeI TCCRAC 1 cut(s) 1021
Mph1103I ATGCAT 2 cut(s) 1500, 1602
MroI TCCGGA 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 454
MseI TTAA 8 cut(s) 504, 708, 741, 753, 786, 1179, 1595, 1641
MspCI CTTAAG 1 cut(s) 503
MspI CCGG 5 cut(s) 32, 149, 377, 386, 1418
MspR9I CCNGG 2 cut(s) 1124, 1418
MvaI CCWGG 1 cut(s) 1124
MvnI CGCG 1 cut(s) 492
MwoI GCNNNNNNNGC 7 cut(s) 11, 307, 382, 467, 1229, 1292, 1301
NciI CCSGG 1 cut(s) 1418
NdeII GATC 4 cut(s) 1051, 1169, 1331, 1438
NlaIII CATG 3 cut(s) 818, 1085, 1502
NlaIV GGNNCC 4 cut(s) 84, 257, 375, 1576
NmuCI GTSAC 2 cut(s) 166, 817
NsiI ATGCAT 2 cut(s) 1500, 1602
NspI RCATGY 2 cut(s) 818, 1502
PaeI GCATGC 1 cut(s) 1502
PciI ACATGT 1 cut(s) 814
PciSI GCTCTTC 2 cut(s) 177, 1095
PcsI WCGNNNNNNNCGW 1 cut(s) 1737
PdmI GAANNNNTTC 1 cut(s) 454
PfeI GAWTC 2 cut(s) 806, 1247
PflFI GACNNNGTC 1 cut(s) 1124
PleI GAGTC 2 cut(s) 314, 979
PpsI GAGTC 2 cut(s) 314, 979
PscI ACATGT 1 cut(s) 814
Psp6I CCWGG 1 cut(s) 1122
PspFI CCCAGC 1 cut(s) 1184
PspGI CCWGG 1 cut(s) 1122
PspN4I GGNNCC 4 cut(s) 84, 257, 375, 1576
PspPI GGNCC 4 cut(s) 256, 289, 399, 1120
PstNI CAGNNNCTG 2 cut(s) 440, 902
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 3 cut(s) 496, 763, 1576
RsaNI GTAC 3 cut(s) 495, 762, 1575
SapI GCTCTTC 2 cut(s) 177, 1095
SaqAI TTAA 8 cut(s) 504, 708, 741, 753, 786, 1179, 1595, 1641
Sau3AI GATC 4 cut(s) 1051, 1169, 1331, 1438
Sau96I GGNCC 4 cut(s) 256, 289, 399, 1120
SchI GAGTC 2 cut(s) 314, 980
ScrFI CCNGG 2 cut(s) 1124, 1418
SduI GDGCHC 2 cut(s) 303, 1482
SexAI ACCWGGT 1 cut(s) 1122
SfaNI GCATC 5 cut(s) 920, 1012, 1282, 1696, 1738
SgrAI CRCCGGYG 1 cut(s) 385
SinI GGWCC 2 cut(s) 289, 1120
SmlI CTYRAG 2 cut(s) 503, 1129
SmoI CTYRAG 2 cut(s) 503, 1129
SphI GCATGC 1 cut(s) 1502
Sse9I AATT 8 cut(s) 546, 563, 576, 607, 1033, 1506, 1626, 1638
SsiI CCGC 4 cut(s) 310, 356, 492, 865
SspI AATATT 1 cut(s) 745
SspMI CTAG 4 cut(s) 17, 267, 1263, 1458
StyD4I CCNGG 2 cut(s) 1122, 1416
StyI CCWWGG 2 cut(s) 978, 1422
TaiI ACGT 1 cut(s) 522
TaqI TCGA 1 cut(s) 338
TaqII GACCGA 2 cut(s) 23, 311
TasI AATT 8 cut(s) 546, 563, 576, 607, 1033, 1506, 1626, 1638
TfiI GAWTC 2 cut(s) 806, 1247
Tru1I TTAA 8 cut(s) 504, 708, 741, 753, 786, 1179, 1595, 1641
Tru9I TTAA 8 cut(s) 504, 708, 741, 753, 786, 1179, 1595, 1641
TscAI CASTG 1 cut(s) 1396
TseFI GTSAC 2 cut(s) 166, 817
Tsp45I GTSAC 2 cut(s) 166, 817
TspDTI ATGAA 6 cut(s) 1026, 1113, 1134, 1680, 1689, 1734
TspRI CASTG 1 cut(s) 1396
Tth111I GACNNNGTC 1 cut(s) 1124
Vha464I CTTAAG 1 cut(s) 503
VpaK11BI GGWCC 2 cut(s) 289, 1120
XceI RCATGY 2 cut(s) 818, 1502
XmnI GAANNNNTTC 1 cut(s) 454
XspI CTAG 4 cut(s) 17, 267, 1263, 1458
Zsp2I ATGCAT 2 cut(s) 1500, 1602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.