RPM1-interacting protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40645 |
| fragaria_vesca | FvH4_5g07230 FvH4_5g07230 FvH4_6g52270 |
| malus_domestica | MD06G1158600.v1.1 MD09G1019200.v1.1 MD14G1165000.v1.1 MD17G1019800.v1.1 |
| prunus_persica | Prupe.3G297800_v2.0.a1 Prupe.5G158200_v2.0.a1 |
| pyrus_communis | pycom06g14150 pycom17g01640 |
| rosa_chinensis | RchiOBHm_Chr7g0191421 |
| rosa_laevigata | RLG00000022224 |
| rosa_multiflora | Rmu_sc0003188.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00078610 Rroxscaffold_3G00263830 |
| rosa_rugosa | Rorug02G0572900.1 |
| rosa_samantha | Rh2AG651900 Rh2BG662700 Rh2CG627300 Rh2DG677800 Rh7AG118100 Rh7BG120200 Rh7CG123000 Rh7DG121100 |
| rosa_wichuraiana | Rw2G053530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 23 |
| AcsI | RAATTY | 1 cut(s) | 35 |
| AcuI | CTGAAG | 2 cut(s) | 51, 93 |
| AfaI | GTAC | 1 cut(s) | 184 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 94 |
| AluBI | AGCT | 3 cut(s) | 65, 71, 128 |
| AluI | AGCT | 3 cut(s) | 65, 71, 128 |
| AoxI | GGCC | 2 cut(s) | 23, 99 |
| ApeKI | GCWGC | 2 cut(s) | 125, 165 |
| ApoI | RAATTY | 1 cut(s) | 35 |
| AsuHPI | GGTGA | 1 cut(s) | 136 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 166, 198 |
| BbsI | GAAGAC | 1 cut(s) | 122 |
| BbvI | GCAGC | 2 cut(s) | 137, 177 |
| BccI | CCATC | 2 cut(s) | 133, 234 |
| BceAI | ACGGC | 1 cut(s) | 178 |
| BciVI | GTATCC | 1 cut(s) | 182 |
| BfuI | GTATCC | 1 cut(s) | 182 |
| BisI | GCNGC | 2 cut(s) | 126, 166 |
| BlsI | GCNGC | 2 cut(s) | 127, 167 |
| BpiI | GAAGAC | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 1 cut(s) | 114 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 38 |
| Bse1I | ACTGG | 2 cut(s) | 120, 190 |
| BseGI | GGATG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseNI | ACTGG | 2 cut(s) | 120, 190 |
| BseXI | GCAGC | 2 cut(s) | 137, 177 |
| BseYI | CCCAGC | 1 cut(s) | 61 |
| BsgI | GTGCAG | 1 cut(s) | 144 |
| BshFI | GGCC | 2 cut(s) | 25, 101 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BsnI | GGCC | 2 cut(s) | 25, 101 |
| BspANI | GGCC | 2 cut(s) | 25, 101 |
| BsrI | ACTGG | 2 cut(s) | 120, 190 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 199 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstEII | GGTNACC | 1 cut(s) | 142 |
| BstF5I | GGATG | 1 cut(s) | 55 |
| BstPI | GGTNACC | 1 cut(s) | 142 |
| BstV1I | GCAGC | 2 cut(s) | 137, 177 |
| BstV2I | GAAGAC | 1 cut(s) | 122 |
| BsuI | GTATCC | 1 cut(s) | 182 |
| BsuRI | GGCC | 2 cut(s) | 25, 101 |
| BtsCI | GGATG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 2 cut(s) | 127, 195 |
| Csp6I | GTAC | 1 cut(s) | 183 |
| CviJI | RGCY | 7 cut(s) | 5, 25, 65, 71, 101, 128, 168 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 25, 65, 71, 101, 128, 168 |
| CviQI | GTAC | 1 cut(s) | 183 |
| EaeI | YGGCCR | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| Eco57I | CTGAAG | 2 cut(s) | 51, 93 |
| Eco91I | GGTNACC | 1 cut(s) | 142 |
| EcoO65I | GGTNACC | 1 cut(s) | 142 |
| FaiI | YATR | 1 cut(s) | 89 |
| Fnu4HI | GCNGC | 2 cut(s) | 126, 166 |
| FokI | GGATG | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 2 cut(s) | 126, 166 |
| GluI | GCNGC | 2 cut(s) | 126, 166 |
| GsaI | CCCAGC | 1 cut(s) | 65 |
| HaeIII | GGCC | 2 cut(s) | 25, 101 |
| HphI | GGTGA | 1 cut(s) | 136 |
| HpyAV | CCTTC | 1 cut(s) | 68 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 199 |
| HpyCH4V | TGCA | 1 cut(s) | 125 |
| LpnPI | CCDG | 4 cut(s) | 75, 115, 133, 171 |
| Lsp1109I | GCAGC | 2 cut(s) | 137, 177 |
| MaeIII | GTNAC | 1 cut(s) | 142 |
| MboII | GAAGA | 4 cut(s) | 127, 148, 186, 247 |
| MluCI | AATT | 1 cut(s) | 35 |
| MnlI | CCTC | 2 cut(s) | 234, 238 |
| MspA1I | CMGCKG | 1 cut(s) | 71 |
| NmuCI | GTSAC | 1 cut(s) | 142 |
| PkrI | GCNGC | 2 cut(s) | 127, 167 |
| PspEI | GGTNACC | 1 cut(s) | 142 |
| PspFI | CCCAGC | 1 cut(s) | 61 |
| PvuII | CAGCTG | 1 cut(s) | 71 |
| RsaI | GTAC | 1 cut(s) | 184 |
| RsaNI | GTAC | 1 cut(s) | 183 |
| SatI | GCNGC | 2 cut(s) | 126, 166 |
| SetI | ASST | 5 cut(s) | 22, 34, 67, 73, 130 |
| SgeI | CNNG | 8 cut(s) | 23, 74, 109, 114, 132, 143, 162, 198 |
| SmlI | CTYRAG | 1 cut(s) | 129 |
| SmoI | CTYRAG | 1 cut(s) | 129 |
| Sse9I | AATT | 1 cut(s) | 35 |
| TaaI | ACNGT | 2 cut(s) | 85, 199 |
| TasI | AATT | 1 cut(s) | 35 |
| TscAI | CASTG | 2 cut(s) | 127, 202 |
| TseFI | GTSAC | 1 cut(s) | 142 |
| TseI | GCWGC | 2 cut(s) | 125, 165 |
| Tsp45I | GTSAC | 1 cut(s) | 142 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| TspRI | CASTG | 2 cut(s) | 127, 202 |
| XapI | RAATTY | 1 cut(s) | 35 |