Prupe.5G193200_v2.0.a1
MYB Family

Myb-related protein 306-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0009059
Physical Location & Seq
Forward (+)
15764216 .. 15766597
2382 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G193200.1

Sequence Viewer

Length: 1092 bp
ATGGGAAGGCCACCTTGCTGTGACAAAGTTGGGGTGAAGAAAGGGCCATGGACTCCAGAGGAAGACATCATCTTGGTCTCTTACATTCAAGAACATGGTCCAGGGAATTGGAGATCAGTTCCTACCAACACTGGTTTGCTGAGATGCAGTAAGAGCTGCAGGCTTAGATGGACAAATTATCTGAGGCCGGGTATCAAACGCGGTAACTTCACCGATCATGAAGAGAAGATGATAATCCACCTCCAAGCTCTTTTGGGCAATAGATGGGCTGCCATAGCTTCCTACCTTCCTCAGAGAACTGACAATGATATAAAAAATTACTGGAACACCCACTTGAAAAAGAAGCTCAGAAAGCTCCAGACAGGGCTTGATGGCCATGACCACCGTAACAGCCAAGATGGTTTTTCAGGTAATTCACATGATCAGCCAATCTCCAAGGGCCAGTGGGAGAGAAGGCTTCAGACTGATATCCACATGGCCAAGCAGGCTCTTTGTGAGGCTCTGTCCCTTGACAAGCCACCTACTCATGATCTTCATTTGCAAGACTTGAAGCCATCAATTAATCTTGGTTACAACAATAATGATCAACCTAACACAAACACTTGTTCTAGGCCTCACCAAGCTTCCACTTATGCATCCAACACCGAAAACATTGCGAAATTGCTCGAAAGCTGGATGAAAAATTCACCAAAAGGACCTTCATCAGCTCAAAATCATAATCCAACAAACTCAGAAACCAATCTTCATCAGATCAATTCCTTCAAAAACAAGAAGAATACAGCTGCAGGTTGTTCCATGAGTACTTCTAGTGAAGGGGCACAAAGTGCAACCACCACACCAGAACAGGCTTTTGATTCCTTGTTCAGCTTCAACTCATCCACATCTGATGTGTCTCAATCTATGTCAGTGGATGAGAACAATGCAAATTTCACAGCAGAAACAAGCTGCCTGTTCCAAGATGAGAGCAAGCCCAATTTGGAGGGACAAGTCCCTCTCACATTGCTGGAGAAGTGGCTATTTGATGATGCTGCGCCTCATGCTCATGAAGACCTAATTGACATGTCATTAGAGAACACATCTGTCTTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009751 GO:0009753 GO:0009787 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010025 GO:0010033 GO:0010035 GO:0010038 GO:0010115 GO:0010166 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010646 GO:0014070 GO:0019216 GO:0019219 GO:0019222 GO:0019747 GO:0023051 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046677 GO:0046686 GO:0046890 GO:0048518 GO:0048522 GO:0048580 GO:0048583 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0060255 GO:0062012 GO:0065007 GO:0071704 GO:0080050 GO:0080090 GO:0080167 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901419 GO:1901568 GO:1901570 GO:1901576 GO:1901700 GO:1902680 GO:1902930 GO:1903506 GO:1903508 GO:1904276 GO:1904278 GO:1905957 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

364

Amino Acids

40.66

Weight (kDa)

6.43

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 776
AccII CGCG 1 cut(s) 201
AciI CCGC 1 cut(s) 201
AcoI YGGCCR 2 cut(s) 373, 477
AcsI RAATTY 2 cut(s) 682, 925
AcuI CTGAAG 1 cut(s) 443
AdeI CACNNNGTG 1 cut(s) 824
AfaI GTAC 1 cut(s) 802
AflIII ACRYGT 1 cut(s) 1059
AgsI TTSAA 5 cut(s) 89, 337, 550, 763, 871
AjnI CCWGG 1 cut(s) 100
AjuI GAANNNNNNNTTGG 2 cut(s) 682, 714
Alw26I GTCTC 2 cut(s) 82, 897
AoxI GGCC 7 cut(s) 8, 44, 185, 373, 439, 477, 611
ApeKI GCWGC 5 cut(s) 156, 269, 782, 945, 1028
ApoI RAATTY 2 cut(s) 682, 925
AseI ATTAAT 1 cut(s) 561
AspLEI GCGC 1 cut(s) 1033
AspS9I GGNCC 4 cut(s) 44, 98, 439, 695
AsuC2I CCSGG 1 cut(s) 189
AsuHPI GGTGA 4 cut(s) 46, 202, 608, 678
AvaII GGWCC 2 cut(s) 98, 695
BaeGI GKGCMC 1 cut(s) 820
BalI TGGCCA 2 cut(s) 375, 479
BbsI GAAGAC 2 cut(s) 69, 1053
BbvI GCAGC 5 cut(s) 143, 256, 769, 932, 1015
BccI CCATC 5 cut(s) 162, 258, 365, 392, 562
BcgI CGANNNNNNTGC 2 cut(s) 635, 669
BciT130I CCWGG 1 cut(s) 102
BclI TGATCA 2 cut(s) 421, 583
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 82, 897
BfaI CTAG 2 cut(s) 609, 807
BfmI CTRYAG 2 cut(s) 157, 783
BfuAI ACCTGC 1 cut(s) 776
BglI GCCNNNNNGGC 1 cut(s) 485
BisI GCNGC 5 cut(s) 157, 270, 783, 946, 1029
BlsI GCNGC 5 cut(s) 158, 271, 784, 947, 1030
BmcAI AGTACT 1 cut(s) 802
Bme1390I CCNGG 2 cut(s) 102, 189
Bme18I GGWCC 2 cut(s) 98, 695
BmgT120I GGNCC 4 cut(s) 44, 98, 439, 695
BmrFI CCNGG 2 cut(s) 102, 189
BmsI GCATC 3 cut(s) 134, 644, 1015
BpiI GAAGAC 2 cut(s) 69, 1053
BpmI CTGGAG 3 cut(s) 39, 341, 1025
BpuMI CCSGG 1 cut(s) 189
BsaBI GATNNNNATC 1 cut(s) 233
BsaI GGTCTC 1 cut(s) 82
BsaJI CCNNGG 3 cut(s) 47, 101, 435
Bse1I ACTGG 3 cut(s) 136, 326, 442
Bse3DI GCAATG 2 cut(s) 651, 998
Bse8I GATNNNNATC 1 cut(s) 233
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 3 cut(s) 47, 101, 435
BseGI GGATG 4 cut(s) 635, 681, 875, 916
BseJI GATNNNNATC 1 cut(s) 233
BseMI GCAATG 2 cut(s) 651, 998
BseMII CTCAG 5 cut(s) 131, 173, 305, 361, 744
BseNI ACTGG 3 cut(s) 136, 326, 442
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 5 cut(s) 143, 256, 769, 932, 1015
Bsh1236I CGCG 1 cut(s) 201
BshFI GGCC 7 cut(s) 10, 46, 187, 375, 441, 479, 613
BsiSI CCGG 1 cut(s) 188
BslFI GGGAC 3 cut(s) 490, 974, 996
BsmAI GTCTC 2 cut(s) 82, 897
BsmFI GGGAC 3 cut(s) 490, 974, 996
BsnI GGCC 7 cut(s) 10, 46, 187, 375, 441, 479, 613
Bso31I GGTCTC 1 cut(s) 82
Bsp1286I GDGCHC 1 cut(s) 820
Bsp143I GATC 6 cut(s) 113, 214, 421, 529, 583, 750
Bsp19I CCATGG 1 cut(s) 47
BspACI CCGC 1 cut(s) 201
BspANI GGCC 7 cut(s) 10, 46, 187, 375, 441, 479, 613
BspCNI CTCAG 5 cut(s) 132, 174, 304, 360, 743
BspFNI CGCG 1 cut(s) 201
BspHI TCATGA 3 cut(s) 217, 526, 1042
BspMAI CTGCAG 2 cut(s) 161, 787
BspMI ACCTGC 1 cut(s) 776
BspTNI GGTCTC 1 cut(s) 82
BsrDI GCAATG 2 cut(s) 651, 998
BsrI ACTGG 3 cut(s) 136, 326, 442
BssECI CCNNGG 3 cut(s) 47, 101, 435
BssMI GATC 6 cut(s) 113, 214, 421, 529, 583, 750
BssT1I CCWWGG 2 cut(s) 47, 435
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 1 cut(s) 386
Bst6I CTCTTC 1 cut(s) 216
BstAPI GCANNNNNTGC 1 cut(s) 824
BstC8I GCNNGC 3 cut(s) 161, 486, 968
BstDEI CTNAG 6 cut(s) 140, 164, 182, 291, 347, 730
BstDSI CCRYGG 1 cut(s) 47
BstF5I GGATG 4 cut(s) 635, 681, 875, 916
BstFNI CGCG 1 cut(s) 201
BstHHI GCGC 1 cut(s) 1033
BstKTI GATC 6 cut(s) 116, 217, 424, 532, 586, 753
BstMAI GTCTC 2 cut(s) 82, 897
BstMBI GATC 6 cut(s) 113, 214, 421, 529, 583, 750
BstMWI GCNNNNNNNGC 6 cut(s) 153, 275, 352, 485, 824, 1037
BstNI CCWGG 1 cut(s) 102
BstNSI RCATGY 1 cut(s) 1063
BstSCI CCNGG 2 cut(s) 100, 187
BstSFI CTRYAG 2 cut(s) 157, 783
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 5 cut(s) 143, 256, 769, 932, 1015
BstV2I GAAGAC 2 cut(s) 69, 1053
BstXI CCANNNNNNTGG 1 cut(s) 108
BsuRI GGCC 7 cut(s) 10, 46, 187, 375, 441, 479, 613
BtgI CCRYGG 1 cut(s) 47
BtsCI GGATG 4 cut(s) 635, 681, 875, 916
BtsIMutI CAGTG 3 cut(s) 129, 449, 912
BveI ACCTGC 1 cut(s) 776
Cac8I GCNNGC 3 cut(s) 161, 486, 968
CciI TCATGA 3 cut(s) 217, 526, 1042
CfoI GCGC 1 cut(s) 1033
Cfr13I GGNCC 4 cut(s) 44, 98, 439, 695
Csp6I GTAC 1 cut(s) 801
CviQI GTAC 1 cut(s) 801
DdeI CTNAG 6 cut(s) 140, 164, 182, 291, 347, 730
DpnI GATC 6 cut(s) 115, 216, 423, 531, 585, 752
DpnII GATC 6 cut(s) 113, 214, 421, 529, 583, 750
DraIII CACNNNGTG 1 cut(s) 824
EaeI YGGCCR 2 cut(s) 373, 477
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
Eco130I CCWWGG 2 cut(s) 47, 435
Eco147I AGGCCT 1 cut(s) 613
Eco31I GGTCTC 1 cut(s) 82
Eco32I GATATC 1 cut(s) 469
Eco47I GGWCC 2 cut(s) 98, 695
Eco57I CTGAAG 1 cut(s) 443
EcoO109I RGGNCCY 1 cut(s) 695
EcoRII CCWGG 1 cut(s) 100
EcoRV GATATC 1 cut(s) 469
EcoT14I CCWWGG 2 cut(s) 47, 435
EcoT22I ATGCAT 1 cut(s) 637
ErhI CCWWGG 2 cut(s) 47, 435
FalI AAGNNNNNCTT 1 cut(s) 30
FaqI GGGAC 3 cut(s) 490, 974, 996
FbaI TGATCA 2 cut(s) 421, 583
Fnu4HI GCNGC 5 cut(s) 157, 270, 783, 946, 1029
FokI GGATG 4 cut(s) 622, 688, 862, 923
Fsp4HI GCNGC 5 cut(s) 157, 270, 783, 946, 1029
FspBI CTAG 2 cut(s) 609, 807
GlaI GCGC 1 cut(s) 1032
GluI GCNGC 5 cut(s) 157, 270, 783, 946, 1029
GsuI CTGGAG 3 cut(s) 39, 341, 1025
HaeIII GGCC 7 cut(s) 10, 46, 187, 375, 441, 479, 613
HapII CCGG 1 cut(s) 188
HhaI GCGC 1 cut(s) 1033
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HindIII AAGCTT 1 cut(s) 621
HinfI GANTC 2 cut(s) 52, 854
HpaII CCGG 1 cut(s) 188
HphI GGTGA 4 cut(s) 46, 202, 608, 678
Hpy188I TCNGA 7 cut(s) 183, 294, 350, 462, 733, 750, 886
Hpy188III TCNNGA 6 cut(s) 56, 89, 218, 358, 527, 1043
HpyAV CCTTC 5 cut(s) 296, 447, 708, 769, 806
HpyCH4III ACNGT 1 cut(s) 386
HpyCH4V TGCA 7 cut(s) 147, 159, 541, 635, 785, 827, 923
HpyF10VI GCNNNNNNNGC 6 cut(s) 153, 275, 352, 485, 824, 1037
HpyF3I CTNAG 6 cut(s) 140, 164, 182, 291, 347, 730
HspAI GCGC 1 cut(s) 1031
Ksp22I TGATCA 2 cut(s) 421, 583
Kzo9I GATC 6 cut(s) 113, 214, 421, 529, 583, 750
LmnI GCTCC 1 cut(s) 360
Lsp1109I GCAGC 5 cut(s) 143, 256, 769, 932, 1015
LweI GCATC 3 cut(s) 134, 644, 1015
MaeI CTAG 2 cut(s) 609, 807
MaeIII GTNAC 4 cut(s) 20, 203, 386, 569
MalI GATC 6 cut(s) 115, 216, 423, 531, 585, 752
MboI GATC 6 cut(s) 113, 214, 421, 529, 583, 750
MboII GAAGA 8 cut(s) 49, 74, 233, 238, 524, 734, 784, 1058
MhlI GDGCHC 1 cut(s) 820
MlsI TGGCCA 2 cut(s) 375, 479
MluNI TGGCCA 2 cut(s) 375, 479
MlyI GAGTC 1 cut(s) 46
MmeI TCCRAC 2 cut(s) 663, 746
MnlI CCTC 9 cut(s) 52, 177, 251, 300, 490, 624, 973, 1002, 1044
Mox20I TGGCCA 2 cut(s) 375, 479
Mph1103I ATGCAT 1 cut(s) 637
MscI TGGCCA 2 cut(s) 375, 479
MseI TTAA 1 cut(s) 561
MslI CAYNNNNRTG 1 cut(s) 1041
Msp20I TGGCCA 2 cut(s) 375, 479
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 2 cut(s) 102, 189
MvaI CCWGG 1 cut(s) 102
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 6 cut(s) 153, 275, 352, 485, 824, 1037
NciI CCSGG 1 cut(s) 189
NcoI CCATGG 1 cut(s) 47
NdeII GATC 6 cut(s) 113, 214, 421, 529, 583, 750
NmuCI GTSAC 1 cut(s) 20
NsiI ATGCAT 1 cut(s) 637
NspI RCATGY 1 cut(s) 1063
PagI TCATGA 3 cut(s) 217, 526, 1042
PceI AGGCCT 1 cut(s) 613
PciI ACATGT 1 cut(s) 1059
PfeI GAWTC 1 cut(s) 854
PkrI GCNGC 5 cut(s) 158, 271, 784, 947, 1030
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
PpuMI RGGWCCY 1 cut(s) 695
PscI ACATGT 1 cut(s) 1059
PshBI ATTAAT 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 695
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PspPI GGNCC 4 cut(s) 44, 98, 439, 695
PspPPI RGGWCCY 1 cut(s) 695
PstI CTGCAG 2 cut(s) 161, 787
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 1 cut(s) 802
RsaNI GTAC 1 cut(s) 801
RseI CAYNNNNRTG 1 cut(s) 1041
SaqAI TTAA 1 cut(s) 561
SatI GCNGC 5 cut(s) 157, 270, 783, 946, 1029
Sau3AI GATC 6 cut(s) 113, 214, 421, 529, 583, 750
Sau96I GGNCC 4 cut(s) 44, 98, 439, 695
ScaI AGTACT 1 cut(s) 802
SchI GAGTC 1 cut(s) 46
ScrFI CCNGG 2 cut(s) 102, 189
SduI GDGCHC 1 cut(s) 820
SfaNI GCATC 3 cut(s) 134, 644, 1015
SfcI CTRYAG 2 cut(s) 157, 783
SinI GGWCC 2 cut(s) 98, 695
SmiMI CAYNNNNRTG 1 cut(s) 1041
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 1 cut(s) 201
SspMI CTAG 2 cut(s) 609, 807
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 2 cut(s) 100, 187
StyI CCWWGG 2 cut(s) 47, 435
TaaI ACNGT 1 cut(s) 386
TaqI TCGA 1 cut(s) 666
TatI WGTACW 1 cut(s) 800
TfiI GAWTC 1 cut(s) 854
Tru1I TTAA 1 cut(s) 561
Tru9I TTAA 1 cut(s) 561
TscAI CASTG 3 cut(s) 136, 449, 912
TseFI GTSAC 1 cut(s) 20
TseI GCWGC 5 cut(s) 156, 269, 782, 945, 1028
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 6 cut(s) 234, 524, 690, 692, 734, 1059
TspRI CASTG 3 cut(s) 136, 449, 912
VpaK11BI GGWCC 2 cut(s) 98, 695
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 2 cut(s) 682, 925
XceI RCATGY 1 cut(s) 1063
XspI CTAG 2 cut(s) 609, 807
ZrmI AGTACT 1 cut(s) 802
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.