Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0016120

Physical Location & Seq

Genomic Coordinates Reverse (-)

16775397 .. 16778333

Gene Structure 2937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G211400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2937 bp

ATGGCTTTTGTGGCACCACCACTCTCATGCCATCCCCTGCCCACACCGAACACCAAACATTCCCTTCACTCAATCTTCACTCCAAAACCAAATGCCTCACTTTCTTTCTGTGCCACTCAAACCCACCAAAGAGAACCTCTCACTTCAACTCACAACTCACTTTCCCAACCCAATTTGCTCCAAGAGATCAACAATCTCTGCGACTCCGGAAACCTCTCTGAGGCTCTGACCCTTCTTCAAGCAGACTCTCGCAATGCCATATCCAGTTTACAACAAAAGAAAGACGCAATGGGTGCCCTGTTGCAGGCCTGTGGCCGCCACAAAGACGTTGAAACCGGACGCAAAGTCCACGACTTGGTATCGGCTTCAACCCAGTTCAGCAATGACTTTGTTCTCAATACCCGCATCATTACTATGTATTCCGTGTGCGGTTCTCCTTCAGATTCTCGCTTGGTTTTTAATGGGTTGCAGAGGAAGAACTTGTTTCAGTGGAATGCACTTGTTAGTGGTTATGCAAGAAACGAGCTTTATGGCGATGCAATTGATGTGTTTATTGAGTTGATTAGCGTCACGGTATTTAAACCCGATAATTTTACGTTCCCTTGTCTTATTAAGGCATGTGGAGGGCTTTTGGACGTGGGTTTGGGGCAGGTAATCCATGGGATGGCTGTGAAGATGGGATTGATGTCTGATGTCTTTGTGGGTAATGCATTGATTGCAATGTATGGCAAATGCGGGTCAATTGAAGACGCGGTTAGGGTGTTTGATTTAATGCCTGAAAGGAATTTGGTTTCCTGGAATTCAATGATATGCGGGTACTCGGAGAATGGGTTTTCTCAACAGTGTTACAGTTTGTTGAGGAAGATTTTGGAGGGTGAGGAAAGTTTGGTACCGGATGTTGCAACATTGGTGACTATATTGCCGTTGTGTGCTGGGAAAGGAGAAGTAAATATAGGGATGGTGATTCATGGTGTGGCAGTGAAATTGGGGCTGAACCAGGAATTGATGGTGAATAATGCCTTGATGGACATGTACTCCAAATGTGGGTACTTGGCTGAAGCTCAAGTCTTGTTTGATAAGAATGATAAGAAAAATGTGGTTTCTTGGAATTCCATCATAGGAGGCTACTCTAGAGAAGGAGATGTTTGGGGCACATTTGATCTTTTCCAAAAAATGCAGATGGAAGAAGAGAAAGTGAAGGTCAATGAGGTTACCGTACTGAATGTGTTACCAGCTTGTTTAGAGGAGTCAGAACTTTTGAGCTTGAAAAAACTTCATGGTTACTCATTCAGACATGGGTTTCTATACGATGAACTGGTCGCCAATGCTTTTGTTTCAGCTTACGCAAAATGTGGGTCACTTACTTCAGCTGAGCGGGTCTTTCATGGCATAGAGACGAAGACAGTGAGCTCCTGGAACGCAGTTATTGGTGGCTATGCCCAAAATGGAGATCCAAAAAAGGCTTTAGATTTGTACCTTCAAATGAAATATTCAGGCTTGGATCCTGACTGGTTTAGCATTGGGAGCCTCCTTTTAGCTTGTGCCCACCTGAAACTTCTTCAACATGGCAGACAGATTCATGGATTTGTGCTACGTGATGGGTCAGAAACAGACTCATTCATTGGTATTTCATTACTATCGTTTTACATCCAGTGTGGTAAATTATCATCCGCAAGAGTATTATTTGATAGGATGGAAGCTAAAAGTAGAGTGTCTTGGAATGCAATGATCACTGGTTACACTCAGAGTGGACTTGCTGATGAAGCCCTCAATCTCTTTCGCCAAATGCTGTCTGATGAAACACTACCTTGTGAAATTGGTACAATGAGCGTGTTTGAGGCATGCTCTCAACTGTCTTCTTTGCGATTGGGAAAAGAATTGCATTGTTTTGCTTTGAAAGCTCGCCTCACAGAAGACCTGTTTGTTGGTTGTTCTCTCATAGATATGTATGCAAAAAGTGGCTGCATAGAAGAATCTCACAGGGTCTTTGATTGGTTAGTTAAGAAAGATGTGCCATCATGGAATGTTATAATTGCAGGATATGGAGTTCATGGACATGGAAGCAAGGCTTTAGAGCTATTTGGAGAAATGGTAAGTTTGGGGCAGAAGCCTGATGGCTTTACGTTTATTGGAGTTCTAACTGCGTGCAGCCATGCTGGGTTGGTTAAGGAGGGGCTAAAATATTTCAACCAGATGCAGAGCTTGTATGGAATTGATCCAAAATTAGAGCATTACGCATGTGTGGTGGACATGCTTGGTCGGGCTGGCCAATTGGAGGAAGCTTTAAACCTCATACACGAGATGCCTGAGGAGCCGGATACCAGAATGTGGAGCTCATTGCTTAGTTCCTGTAGGCTTCACAATAACTTGGATATGGGGCAGAAAATTTCTGAAAAGTTAATAGAATTAGAGCCTGAAAAGGCAGAGAGTTATGTGCTACTGTCAAATTTATATGCTGCATCAGGGAAATGGGATGATGTGAGACGGGTGCGGCAAAGGATGAAGGAGATGGGCCTTCAGAAAGACGCCGGGCACAGTTGGATTGACGTTGGAGGGCAAGTTTATAGCTTTGTTGCTGGTGACACTTCCCTGCCAGAGTCGGGAGAGATTAAGAAGATGTGGAGCAGATTAGAGGAAAAGATAAGTAAATTTGGATATAGACCCAACACAGGCTCTGTGCTTCATGAACTGGAAGAGGAGGAGGAGAAGATTGAAATATTGAGGAGGCACAGTGAGAAGCTTGCCATTTCATTTGGATTGTTGAAGATGAGTAAAGGTGCAACATTGAGAATCTGCAAAAACCTGCGCATTTGTGTAGATTGTCACAATGCTGCTAAGTTGATATCCAAGGTTGTTGAAAGAGAGATAGTTGTGAGAGACAATAAGCGCTTCCATCATTTCAAGCATGGCCTTTGTTCTTGTGGAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

979

Amino Acids

108.72

Weight (kDa)

6.18

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18485
fragaria_vesca	FvH4_5g13240
malus_domestica	MD06G1207000.v1.1
prunus_persica	Prupe.5G211400_v2.0.a1
pyrus_communis	pycom06g18480
rosa_chinensis	RchiOBHm_Chr7g0183921
rosa_laevigata	RLG00000005010
rosa_multiflora	Rmu_sc0004712.1_g000029 Rmu_sc0007533.1_g000009
rosa_rugosa	Rorug06G0461400
rosa_samantha	Rh7AG062600 Rh7BG062800 Rh7CG064100 Rh7DG062600
rosa_wichuraiana	Rw7G005170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2030
Acc16I	TGCGCA	1 cut(s)	2807
Acc36I	ACCTGC	2 cut(s)	640, 2811
Acc65I	GGTACC	1 cut(s)	889
AccB1I	GGYRCC	3 cut(s)	13, 293, 889
AccB7I	CCANNNNNTGG	3 cut(s)	355, 664, 2328
AccBSI	CCGCTC	1 cut(s)	1375
AccII	CGCG	1 cut(s)	752
AccIII	TCCGGA	1 cut(s)	206
AciI	CCGC	9 cut(s)	316, 403, 429, 735, 752, 813, 1375, 1671, 2491
AclWI	GGATC	4 cut(s)	1445, 1496, 1509, 2210
AcoI	YGGCCR	2 cut(s)	313, 2266
AcsI	RAATTY	6 cut(s)	784, 799, 1108, 2385, 2446, 2648
AcuI	CTGAAG	4 cut(s)	423, 1077, 1350, 2501
AcyI	GRCGYC	1 cut(s)	2526
AfaI	GTAC	7 cut(s)	818, 891, 1034, 1049, 1218, 1475, 1822
AfeI	AGCGCT	1 cut(s)	2888
AfiI	CCNNNNNNNGG	9 cut(s)	220, 304, 355, 664, 1044, 2275, 2328, 2600, 2669
AflIII	ACRYGT	1 cut(s)	1029
AhdI	GACNNNNNGTC	1 cut(s)	344
AjiI	CACGTC	1 cut(s)	637
AjnI	CCWGG	3 cut(s)	794, 996, 1412
AloI	GAACNNNNNNTCC	2 cut(s)	2031, 2063
Alw21I	GWGCWC	2 cut(s)	1412, 2336
Alw26I	GTCTC	3 cut(s)	1388, 2476, 2871
AlwI	GGATC	4 cut(s)	1445, 1496, 1509, 2210
AlwNI	CAGNNNCTG	1 cut(s)	2675
Aor13HI	TCCGGA	1 cut(s)	206
Aor51HI	AGCGCT	1 cut(s)	2888
AoxI	GGCC	5 cut(s)	306, 313, 2266, 2512, 2908
ApeKI	GCWGC	4 cut(s)	1962, 2148, 2456, 2831
ApoI	RAATTY	6 cut(s)	784, 799, 1108, 2385, 2446, 2648
ArsI	GACNNNNNNTTYG	2 cut(s)	1340, 1372
Asp718I	GGTACC	1 cut(s)	889
AspLEI	GCGC	2 cut(s)	2808, 2889
AspS9I	GGNCC	1 cut(s)	2512
AsuC2I	CCSGG	1 cut(s)	2530
AsuHPI	GGTGA	5 cut(s)	887, 922, 973, 1021, 2591
AxyI	CCTNAGG	1 cut(s)	2307
BaeGI	GKGCMC	4 cut(s)	298, 1154, 1546, 2535
BalI	TGGCCA	1 cut(s)	2268
BamHI	GGATCC	1 cut(s)	1501
BanI	GGYRCC	3 cut(s)	13, 293, 889
BanII	GRGCYC	2 cut(s)	1412, 2336
BauI	CACGAG	1 cut(s)	2297
BbsI	GAAGAC	4 cut(s)	753, 1406, 1848, 1920
Bbv12I	GWGCWC	2 cut(s)	1412, 2336
BbvI	GCAGC	4 cut(s)	1949, 2160, 2443, 2818
BceAI	ACGGC	1 cut(s)	907
BciT130I	CCWGG	3 cut(s)	796, 998, 1414
BciVI	GTATCC	1 cut(s)	2311
BclI	TGATCA	1 cut(s)	1728
BcnI	CCSGG	1 cut(s)	2530
BcoDI	GTCTC	3 cut(s)	1388, 2476, 2871
BfaI	CTAG	1 cut(s)	1131
BfmI	CTRYAG	1 cut(s)	2350
BfoI	RGCGCY	1 cut(s)	2890
BfuAI	ACCTGC	2 cut(s)	640, 2811
BfuI	GTATCC	1 cut(s)	2311
BisI	GCNGC	6 cut(s)	316, 1963, 2149, 2457, 2492, 2832
BlpI	GCTNAGC	1 cut(s)	1371
BlsI	GCNGC	6 cut(s)	317, 1964, 2150, 2458, 2493, 2833
Bme1390I	CCNGG	4 cut(s)	796, 998, 1414, 2530
BmeRI	GACNNNNNGTC	1 cut(s)	344
BmgBI	CACGTC	1 cut(s)	637
BmgT120I	GGNCC	1 cut(s)	2512
BmiI	GGNNCC	6 cut(s)	15, 295, 891, 1503, 1526, 2313
BmrFI	CCNGG	4 cut(s)	796, 998, 1414, 2530
BmrI	ACTGGG	1 cut(s)	367
BmsI	GCATC	5 cut(s)	414, 526, 2184, 2292, 2468
BmuI	ACTGGG	1 cut(s)	367
BpiI	GAAGAC	4 cut(s)	753, 1406, 1848, 1920
BplI	GAGNNNNNCTC	4 cut(s)	123, 155, 1829, 1861
Bpu1102I	GCTNAGC	1 cut(s)	1371
BpuEI	CTTGAG	1 cut(s)	1047
BpuMI	CCSGG	1 cut(s)	2530
BsaAI	YACGTR	1 cut(s)	1595
BsaHI	GRCGYC	1 cut(s)	2526
BsaJI	CCNNGG	2 cut(s)	658, 2847
BsaWI	WCCGGW	3 cut(s)	206, 335, 892
Bsc4I	CCNNNNNNNGG	9 cut(s)	220, 304, 355, 664, 1044, 2275, 2328, 2600, 2669
Bse1I	ACTGG	7 cut(s)	264, 373, 1320, 1514, 1651, 1738, 2694
Bse21I	CCTNAGG	1 cut(s)	2307
Bse3DI	GCAATG	6 cut(s)	259, 294, 388, 726, 1731, 2336
BseAI	TCCGGA	1 cut(s)	206
BseBI	CCWGG	3 cut(s)	796, 998, 1414
BseDI	CCNNGG	2 cut(s)	658, 2847
BseGI	GGATG	9 cut(s)	31, 669, 901, 963, 1647, 1667, 1698, 2479, 2505
BseLI	CCNNNNNNNGG	9 cut(s)	220, 304, 355, 664, 1044, 2275, 2328, 2600, 2669
BseMI	GCAATG	6 cut(s)	259, 294, 388, 726, 1731, 2336
BseMII	CTCAG	4 cut(s)	210, 1362, 1757, 2298
BseNI	ACTGG	7 cut(s)	264, 373, 1320, 1514, 1651, 1738, 2694
BseRI	GAGGAG	6 cut(s)	1259, 2324, 2711, 2714, 2717, 2737
BseSI	GKGCMC	4 cut(s)	298, 1154, 1546, 2535
BseXI	GCAGC	4 cut(s)	1949, 2160, 2443, 2818
BseYI	CCCAGC	2 cut(s)	932, 2156
BsgI	GTGCAG	1 cut(s)	2167
Bsh1236I	CGCG	1 cut(s)	752
BshFI	GGCC	5 cut(s)	308, 315, 2268, 2514, 2910
BshNI	GGYRCC	3 cut(s)	13, 293, 889
BsiHKAI	GWGCWC	2 cut(s)	1412, 2336
BsiSI	CCGG	5 cut(s)	207, 336, 893, 2315, 2529
BslI	CCNNNNNNNGG	9 cut(s)	220, 304, 355, 664, 1044, 2275, 2328, 2600, 2669
BsmAI	GTCTC	3 cut(s)	1388, 2476, 2871
BsmBI	CGTCTC	2 cut(s)	1388, 2476
BsmI	GAATGC	2 cut(s)	499, 1726
BsnI	GGCC	5 cut(s)	308, 315, 2268, 2514, 2910
Bsp1286I	GDGCHC	6 cut(s)	298, 1154, 1412, 1546, 2336, 2535
Bsp13I	TCCGGA	1 cut(s)	206
Bsp143I	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
Bsp1720I	GCTNAGC	1 cut(s)	1371
Bsp19I	CCATGG	1 cut(s)	658
BspACI	CCGC	9 cut(s)	316, 403, 429, 735, 752, 813, 1375, 1671, 2491
BspANI	GGCC	5 cut(s)	308, 315, 2268, 2514, 2910
BspCNI	CTCAG	4 cut(s)	211, 1363, 1756, 2299
BspEI	TCCGGA	1 cut(s)	206
BspFNI	CGCG	1 cut(s)	752
BspHI	TCATGA	1 cut(s)	2683
BspLI	GGNNCC	6 cut(s)	15, 295, 891, 1503, 1526, 2313
BspMI	ACCTGC	2 cut(s)	640, 2811
BspPI	GGATC	4 cut(s)	1445, 1496, 1509, 2210
BspT107I	GGYRCC	3 cut(s)	13, 293, 889
BsrBI	CCGCTC	1 cut(s)	1375
BsrDI	GCAATG	6 cut(s)	259, 294, 388, 726, 1731, 2336
BsrI	ACTGG	7 cut(s)	264, 373, 1320, 1514, 1651, 1738, 2694
BssECI	CCNNGG	2 cut(s)	658, 2847
BssMI	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
BssNI	GRCGYC	1 cut(s)	2526
BssSI	CACGAG	1 cut(s)	2297
BssT1I	CCWWGG	2 cut(s)	658, 2847
Bst2BI	CACGAG	1 cut(s)	2297
Bst2UI	CCWGG	3 cut(s)	796, 998, 1414
Bst4CI	ACNGT	9 cut(s)	574, 843, 851, 1216, 1405, 1854, 2442, 2537, 2732
Bst6I	CTCTTC	2 cut(s)	1182, 2688
BstACI	GRCGYC	1 cut(s)	2526
BstAPI	GCANNNNNTGC	2 cut(s)	293, 716
BstBAI	YACGTR	1 cut(s)	1595
BstC8I	GCNNGC	6 cut(s)	306, 1843, 1903, 2146, 2266, 2742
BstDEI	CTNAG	6 cut(s)	219, 1371, 1743, 2307, 2342, 2835
BstDSI	CCRYGG	1 cut(s)	658
BstEII	GGTNACC	1 cut(s)	1210
BstENI	CCTNNNNNAGG	2 cut(s)	218, 302
BstF5I	GGATG	9 cut(s)	31, 669, 901, 963, 1647, 1667, 1698, 2479, 2505
BstFNI	CGCG	1 cut(s)	752
BstH2I	RGCGCY	1 cut(s)	2890
BstHHI	GCGC	2 cut(s)	2808, 2889
BstKTI	GATC	6 cut(s)	189, 1162, 1453, 1504, 1731, 2218
BstMAI	GTCTC	3 cut(s)	1388, 2476, 2871
BstMBI	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 293, 716, 1524, 1763, 1898, 2311
BstNI	CCWGG	3 cut(s)	796, 998, 1414
BstNSI	RCATGY	5 cut(s)	621, 1033, 1845, 2241, 2254
BstPI	GGTNACC	1 cut(s)	1210
BstSCI	CCNGG	4 cut(s)	794, 996, 1412, 2528
BstSFI	CTRYAG	1 cut(s)	2350
BstSLI	GKGCMC	4 cut(s)	298, 1154, 1546, 2535
BstUI	CGCG	1 cut(s)	752
BstV1I	GCAGC	4 cut(s)	1949, 2160, 2443, 2818
BstV2I	GAAGAC	4 cut(s)	753, 1406, 1848, 1920
BstX2I	RGATCY	2 cut(s)	1450, 1501
BstYI	RGATCY	2 cut(s)	1450, 1501
Bsu36I	CCTNAGG	1 cut(s)	2307
BsuI	GTATCC	1 cut(s)	2311
BsuRI	GGCC	5 cut(s)	308, 315, 2268, 2514, 2910
BtgI	CCRYGG	1 cut(s)	658
BtgZI	GCGATG	1 cut(s)	549
BtrI	CACGTC	1 cut(s)	637
BtsCI	GGATG	9 cut(s)	31, 669, 901, 963, 1647, 1667, 1698, 2479, 2505
BtsI	GCAGTG	1 cut(s)	984
BtsIMutI	CAGTG	7 cut(s)	494, 848, 984, 1410, 1658, 1731, 2737
BveI	ACCTGC	2 cut(s)	640, 2811
Cac8I	GCNNGC	6 cut(s)	306, 1843, 1903, 2146, 2266, 2742
CaiI	CAGNNNCTG	1 cut(s)	2675
CciI	TCATGA	1 cut(s)	2683
CfoI	GCGC	2 cut(s)	2808, 2889
Cfr13I	GGNCC	1 cut(s)	2512
CseI	GACGC	5 cut(s)	293, 348, 556, 758, 2534
Csp6I	GTAC	7 cut(s)	817, 890, 1033, 1048, 1217, 1474, 1821
CviQI	GTAC	7 cut(s)	817, 890, 1033, 1048, 1217, 1474, 1821
DdeI	CTNAG	6 cut(s)	219, 1371, 1743, 2307, 2342, 2835
DpnI	GATC	6 cut(s)	188, 1161, 1452, 1503, 1730, 2217
DpnII	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
DraI	TTTAAA	2 cut(s)	580, 2286
DriI	GACNNNNNGTC	1 cut(s)	344
EaeI	YGGCCR	2 cut(s)	313, 2266
Eam1104I	CTCTTC	2 cut(s)	1182, 2688
Eam1105I	GACNNNNNGTC	1 cut(s)	344
EarI	CTCTTC	2 cut(s)	1182, 2688
Ecl136II	GAGCTC	2 cut(s)	1410, 2334
Eco130I	CCWWGG	2 cut(s)	658, 2847
Eco147I	AGGCCT	1 cut(s)	308
Eco24I	GRGCYC	2 cut(s)	1412, 2336
Eco32I	GATATC	1 cut(s)	2844
Eco47III	AGCGCT	1 cut(s)	2888
Eco53kI	GAGCTC	2 cut(s)	1410, 2334
Eco57I	CTGAAG	4 cut(s)	423, 1077, 1350, 2501
Eco81I	CCTNAGG	1 cut(s)	2307
Eco91I	GGTNACC	1 cut(s)	1210
EcoICRI	GAGCTC	2 cut(s)	1410, 2334
EcoNI	CCTNNNNNAGG	2 cut(s)	218, 302
EcoO65I	GGTNACC	1 cut(s)	1210
EcoRI	GAATTC	2 cut(s)	799, 1108
EcoRII	CCWGG	3 cut(s)	794, 996, 1412
EcoRV	GATATC	1 cut(s)	2844
EcoT14I	CCWWGG	2 cut(s)	658, 2847
EcoT22I	ATGCAT	1 cut(s)	712
EcoT38I	GRGCYC	2 cut(s)	1412, 2336
ErhI	CCWWGG	2 cut(s)	658, 2847
Esp3I	CGTCTC	2 cut(s)	1388, 2476
FalI	AAGNNNNNCTT	2 cut(s)	2053, 2085
FauI	CCCGC	4 cut(s)	410, 728, 806, 1368
FbaI	TGATCA	1 cut(s)	1728
Fnu4HI	GCNGC	6 cut(s)	316, 1963, 2149, 2457, 2492, 2832
FokI	GGATG	9 cut(s)	18, 676, 908, 970, 1634, 1654, 1705, 2486, 2512
FriOI	GRGCYC	2 cut(s)	1412, 2336
Fsp4HI	GCNGC	6 cut(s)	316, 1963, 2149, 2457, 2492, 2832
FspBI	CTAG	1 cut(s)	1131
FspI	TGCGCA	1 cut(s)	2807
GlaI	GCGC	2 cut(s)	2807, 2888
GluI	GCNGC	6 cut(s)	316, 1963, 2149, 2457, 2492, 2832
GsaI	CCCAGC	2 cut(s)	936, 2160
HaeII	RGCGCY	1 cut(s)	2890
HaeIII	GGCC	5 cut(s)	308, 315, 2268, 2514, 2910
HapII	CCGG	5 cut(s)	207, 336, 893, 2315, 2529
HgaI	GACGC	5 cut(s)	293, 348, 556, 758, 2534
HhaI	GCGC	2 cut(s)	2808, 2889
Hin1I	GRCGYC	1 cut(s)	2526
Hin6I	GCGC	2 cut(s)	2806, 2887
HinP1I	GCGC	2 cut(s)	2806, 2887
HindIII	AAGCTT	2 cut(s)	2280, 2738
HpaII	CCGG	5 cut(s)	207, 336, 893, 2315, 2529
HphI	GGTGA	5 cut(s)	887, 922, 973, 1021, 2591
Hpy166II	GTNNAC	4 cut(s)	269, 349, 1751, 2248
Hpy188III	TCNNGA	5 cut(s)	207, 1131, 1505, 2601, 2684
Hpy8I	GTNNAC	4 cut(s)	269, 349, 1751, 2248
HpyAV	CCTTC	8 cut(s)	74, 242, 447, 1130, 1192, 1487, 2497, 2525
HpyCH4III	ACNGT	9 cut(s)	574, 843, 851, 1216, 1405, 1854, 2442, 2537, 2732
HpyCH4IV	ACGT	6 cut(s)	327, 596, 636, 1594, 2123, 2547
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 293, 716, 1524, 1763, 1898, 2311
HpyF3I	CTNAG	6 cut(s)	219, 1371, 1743, 2307, 2342, 2835
HpySE526I	ACGT	6 cut(s)	327, 596, 636, 1594, 2123, 2547
Hsp92I	GRCGYC	1 cut(s)	2526
HspAI	GCGC	2 cut(s)	2806, 2887
Kpn2I	TCCGGA	1 cut(s)	206
KpnI	GGTACC	1 cut(s)	893
Ksp22I	TGATCA	1 cut(s)	1728
Kzo9I	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
LmnI	GCTCC	6 cut(s)	183, 1415, 1524, 2311, 2331, 2622
Lsp1109I	GCAGC	4 cut(s)	1949, 2160, 2443, 2818
LweI	GCATC	5 cut(s)	414, 526, 2184, 2292, 2468
MaeI	CTAG	1 cut(s)	1131
MaeII	ACGT	6 cut(s)	327, 596, 636, 1594, 2123, 2547
MalI	GATC	6 cut(s)	188, 1161, 1452, 1503, 1730, 2217
MbiI	CCGCTC	1 cut(s)	1375
MboI	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
MfeI	CAATTG	3 cut(s)	540, 741, 2270
MflI	RGATCY	2 cut(s)	1450, 1501
MhlI	GDGCHC	6 cut(s)	298, 1154, 1412, 1546, 2336, 2535
MlsI	TGGCCA	1 cut(s)	2268
MluNI	TGGCCA	1 cut(s)	2268
MlyI	GAGTC	5 cut(s)	197, 239, 1256, 1607, 2606
MmeI	TCCRAC	2 cut(s)	2519, 2530
Mox20I	TGGCCA	1 cut(s)	2268
Mph1103I	ATGCAT	1 cut(s)	712
MroI	TCCGGA	1 cut(s)	206
MscI	TGGCCA	1 cut(s)	2268
MseI	TTAA	9 cut(s)	459, 579, 612, 770, 2001, 2166, 2285, 2399, 2610
MslI	CAYNNNNRTG	4 cut(s)	25, 413, 1943, 2055
Msp20I	TGGCCA	1 cut(s)	2268
MspA1I	CMGCKG	1 cut(s)	1370
MspI	CCGG	5 cut(s)	207, 336, 893, 2315, 2529
MspR9I	CCNGG	4 cut(s)	796, 998, 1414, 2530
MunI	CAATTG	3 cut(s)	540, 741, 2270
Mva1269I	GAATGC	2 cut(s)	499, 1726
MvaI	CCWGG	3 cut(s)	796, 998, 1414
MvnI	CGCG	1 cut(s)	752
MwoI	GCNNNNNNNGC	7 cut(s)	11, 293, 716, 1524, 1763, 1898, 2311
NciI	CCSGG	1 cut(s)	2530
NcoI	CCATGG	1 cut(s)	658
NdeII	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
NlaIV	GGNNCC	6 cut(s)	15, 295, 891, 1503, 1526, 2313
NmuCI	GTSAC	5 cut(s)	568, 910, 1356, 2579, 2822
NsbI	TGCGCA	1 cut(s)	2807
NsiI	ATGCAT	1 cut(s)	712
NspI	RCATGY	5 cut(s)	621, 1033, 1845, 2241, 2254
PaeI	GCATGC	1 cut(s)	1845
PagI	TCATGA	1 cut(s)	2683
PceI	AGGCCT	1 cut(s)	308
PciI	ACATGT	1 cut(s)	1029
PctI	GAATGC	2 cut(s)	499, 1726
PfeI	GAWTC	5 cut(s)	443, 964, 1576, 1973, 2790
PflMI	CCANNNNNTGG	3 cut(s)	355, 664, 2328
PfoI	TCCNGGA	2 cut(s)	794, 1412
PkrI	GCNGC	6 cut(s)	317, 1964, 2150, 2458, 2493, 2833
PleI	GAGTC	5 cut(s)	197, 239, 1255, 1607, 2605
PpsI	GAGTC	5 cut(s)	197, 239, 1255, 1607, 2605
Ppu21I	YACGTR	1 cut(s)	1595
PscI	ACATGT	1 cut(s)	1029
PsiI	TTATAA	1 cut(s)	2030
Psp124BI	GAGCTC	2 cut(s)	1412, 2336
Psp6I	CCWGG	3 cut(s)	794, 996, 1412
PspEI	GGTNACC	1 cut(s)	1210
PspFI	CCCAGC	2 cut(s)	932, 2156
PspGI	CCWGG	3 cut(s)	794, 996, 1412
PspN4I	GGNNCC	6 cut(s)	15, 295, 891, 1503, 1526, 2313
PspPI	GGNCC	1 cut(s)	2512
PstNI	CAGNNNCTG	1 cut(s)	2675
PsuI	RGATCY	2 cut(s)	1450, 1501
PvuII	CAGCTG	1 cut(s)	1370
RsaI	GTAC	7 cut(s)	818, 891, 1034, 1049, 1218, 1475, 1822
RsaNI	GTAC	7 cut(s)	817, 890, 1033, 1048, 1217, 1474, 1821
RseI	CAYNNNNRTG	4 cut(s)	25, 413, 1943, 2055
SacI	GAGCTC	2 cut(s)	1412, 2336
SaqAI	TTAA	9 cut(s)	459, 579, 612, 770, 2001, 2166, 2285, 2399, 2610
SatI	GCNGC	6 cut(s)	316, 1963, 2149, 2457, 2492, 2832
Sau3AI	GATC	6 cut(s)	186, 1159, 1450, 1501, 1728, 2215
Sau96I	GGNCC	1 cut(s)	2512
SchI	GAGTC	5 cut(s)	197, 239, 1256, 1607, 2606
ScrFI	CCNGG	4 cut(s)	796, 998, 1414, 2530
SduI	GDGCHC	6 cut(s)	298, 1154, 1412, 1546, 2336, 2535
SfaNI	GCATC	5 cut(s)	414, 526, 2184, 2292, 2468
SfcI	CTRYAG	1 cut(s)	2350
SmiMI	CAYNNNNRTG	4 cut(s)	25, 413, 1943, 2055
SmlI	CTYRAG	1 cut(s)	1062
SmoI	CTYRAG	1 cut(s)	1062
SphI	GCATGC	1 cut(s)	1845
SseBI	AGGCCT	1 cut(s)	308
SsiI	CCGC	9 cut(s)	316, 403, 429, 735, 752, 813, 1375, 1671, 2491
SspI	AATATT	3 cut(s)	1490, 2183, 2718
SspMI	CTAG	1 cut(s)	1131
SstI	GAGCTC	2 cut(s)	1412, 2336
StuI	AGGCCT	1 cut(s)	308
StyD4I	CCNGG	4 cut(s)	794, 996, 1412, 2528
StyI	CCWWGG	2 cut(s)	658, 2847
TaaI	ACNGT	9 cut(s)	574, 843, 851, 1216, 1405, 1854, 2442, 2537, 2732
TaiI	ACGT	6 cut(s)	330, 599, 639, 1597, 2126, 2550
TatI	WGTACW	1 cut(s)	1032
TauI	GCSGC	2 cut(s)	318, 2494
TfiI	GAWTC	5 cut(s)	443, 964, 1576, 1973, 2790
Tru1I	TTAA	9 cut(s)	459, 579, 612, 770, 2001, 2166, 2285, 2399, 2610
Tru9I	TTAA	9 cut(s)	459, 579, 612, 770, 2001, 2166, 2285, 2399, 2610
TscAI	CASTG	7 cut(s)	494, 848, 984, 1410, 1658, 1738, 2737
TseFI	GTSAC	5 cut(s)	568, 910, 1356, 2579, 2822
TseI	GCWGC	4 cut(s)	1962, 2148, 2456, 2831
Tsp45I	GTSAC	5 cut(s)	568, 910, 1356, 2579, 2822
TspGWI	ACGGA	1 cut(s)	412
TspRI	CASTG	7 cut(s)	494, 848, 984, 1410, 1658, 1738, 2737
Van91I	CCANNNNNTGG	3 cut(s)	355, 664, 2328
XagI	CCTNNNNNAGG	2 cut(s)	218, 302
XapI	RAATTY	6 cut(s)	784, 799, 1108, 2385, 2446, 2648
XbaI	TCTAGA	1 cut(s)	1130
XceI	RCATGY	5 cut(s)	621, 1033, 1845, 2241, 2254
XspI	CTAG	1 cut(s)	1131
Zsp2I	ATGCAT	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.