Rh7CG064100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0016120
Physical Location & Seq
Reverse (-)
4641478 .. 4645768
4291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG064100.1

Sequence Viewer

Length: 2019 bp
ATGGCCTCTGTGGCACCACCACCACTCCCATTCTCATATCATCATCATCATCCCCTCCTTCCCAAACCAAACCCCAAACACTCCATTCTCACACCAAAATCTTCACTTTCTTTCTCTCCCACTCAAACCAACTCCCTCCCTCCAACCAAAACCAACTCACTCCAAGACCTCAACCACCTCTGCAACTCCGGCAACCTCTCCGCCGCCCTCACCTTCCTCCAAACCAATGCCTTCCCCACCTCACAGCACCTCAAAGACGCCATCGGCGCCCTCCTCCAGGCCTGTGGCCGCCACAAGGACATCGAAACCGGCCGCAAGCTCCACCACCTCGTCTCCCAATCCCCCCACTTCACCCACGACTTCGTCCTCAACACCCGCATCATCACCATGTACTCCATGTGCAACTCTCCTTCCGATTCCCGCCTCGTTTTCGAAGGGTTACAGAGGAGGAACTTGTTTCAGTGGAATGCTCTGGTTAGTGGGTACTCAAGAAACGAGCTTTATGAGGAAGCAATTGATACCTTTATTAAGTTGATAAGCGCCGCGGAGTTTAAACCCGATAATTTCACAATGCCTTGTGTGATCAAGGCCTGTGGTGGGCTTTTGGATGTGGGTTTGGGGCAGGGGGTTCATGGGATGGTTGTGAAGATGGGTTTGGTTTCGGATGTGTTTGTGGGGAATGCATTGATTGCGGTGTATGGGAAATTTGGGTTTGTTGGGGATTCAGTTAAGGTGTTTGAGAAAATGAGTGCGAGGAACTTGGTGTCTTGGAATTCGATGATTGGGGTGTTTTCAGAGAATGGGATGTGTGAAGAGAGTTGTAGGTTGTTGGTGAGGCTTTTGGAGGGTGAGGAAGGGTTTGTTCCGGATGAGGCGACGTTGGTGACTGTATTGCCTGGTTGTGCTGGGAAAGGGGATGTTAGAATGGGGATGGAGATTCATGGTTTGGCGGTGAAGTTGGGACTGGATAAGGAGTTGATGTTGAATAATGCCTTGATGGACATGTATTTGAAATGTGGGTACTTAACGGAAGCTCGAGTTTTGTTTGAGAGAAATGAGAGGAAGAATGTGGTGTCTTGGAATGCTTTCATAGGAGGTTATTCTAGACAAGGGGATGTTAGTGGAGCATTTGATCTTTTGCGAAAAATGCAGATGAAGGAGAAGGTGAATGAGGTCACCGTCTTAAATGTGTTACCCGTTTTTTTAGAGGAGTCGGAACTTTTGAGCTTGAAAGAGCTTCATGGTTACTCATTCAGACATGGGTTTCAAGATGATGAGCTGGTAGCCAATGCTTTTGTTGCAGCCTATGCGAAATGTGGGTCGCTGAGTTCTGCTGAGCAGGTGTTTTATGGTATTGAGACAAAGAAAGTGAGCTCCTGGAATGCAGTTATTGGTGGCCATGCCCAGAATGGAGATCCAAAAAAGGCTTTAGATTTGTACCTTCAAATGAAACAATCAGGTTTGGATCCTGACAAGTTTAGCATTGGTAGCCTCCTTTTAGCTTGTGCCCACCTCAAATTTCTTCAATATGGTAAAGAGATTCATGGGTTTGTGCTTCGTAATGGGTTAGAGTGGGATTCATTTATTGGTATTTCATTACTGTCCTTTTACATCCAATGTGGTAAACTATCGACGGCAAGAGCATTATTTGATAGGATGGAAGATAAAATTCCAGTGTCATGGAATGCAATAATCTCTGGTTACTCTCAGATTGGACTTCCTGATGAAGCCCTCGATCTCTTTCGACTAATGCTGTCTAATGGAATCCTACCTGGTGAAATAGCCACAATGAGTGCACTGGGGGCTTGTTCACAACTGTCAGCTCTGCGTCTAGGGAAAGAACTGCATTGTTTTGCTTTGAAAGCACGCCTTACACTAGACCTGTTTGTTGGTTGTTCTCTCATAGATATGTATGCAAAAAGTGGCTGCATAGAACAATCTCACAGGGCATTTGACAGTTTAACAAAGAAAGATGTGGCATCATGGAATGTTATAATTGCAGGCTCAAAACGTAGGTAG

Protein Analysis

672

Amino Acids

74.03

Weight (kDa)

7.28

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 355 - 386 1e-06 PPR repeat family
PPR PF01535 358 - 386 6.3e-06 PPR repeat
PPR_2 PF13041 456 - 504 2e-10 PPR repeat family
PPR PF01535 459 - 488 1.8e-07 PPR repeat
PPR PF01535 559 - 589 4.9e-09 PPR repeat
PPR_2 PF13041 559 - 593 1.5e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016120)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18485
fragaria_vesca FvH4_5g13240
malus_domestica MD06G1207000.v1.1
prunus_persica Prupe.5G211400_v2.0.a1
pyrus_communis pycom06g18480
rosa_chinensis RchiOBHm_Chr7g0183921
rosa_laevigata RLG00000005010
rosa_multiflora Rmu_sc0004712.1_g000029 Rmu_sc0007533.1_g000009
rosa_rugosa Rorug06G0461400
rosa_samantha Rh7AG062600 Rh7BG062800 Rh7CG064100 Rh7DG062600
rosa_wichuraiana Rw7G005170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1994
AarI CACCTGC 1 cut(s) 1330
Acc36I ACCTGC 1 cut(s) 1330
AccB1I GGYRCC 2 cut(s) 13, 266
AccII CGCG 1 cut(s) 545
AccIII TCCGGA 1 cut(s) 865
AclWI GGATC 3 cut(s) 1409, 1460, 1473
AcoI YGGCCR 3 cut(s) 286, 310, 1396
AcsI RAATTY 4 cut(s) 704, 772, 1517, 1668
AcyI GRCGYC 2 cut(s) 258, 267
AfaI GTAC 4 cut(s) 392, 485, 1022, 1439
AfiI CCNNNNNNNGG 3 cut(s) 277, 295, 597
AflIII ACRYGT 1 cut(s) 1002
AgsI TTSAA 7 cut(s) 985, 1012, 1231, 1268, 1445, 1526, 1861
AjnI CCWGG 4 cut(s) 276, 895, 1376, 1771
AjuI GAANNNNNNNTTGG 2 cut(s) 638, 670
AluBI AGCT 9 cut(s) 319, 499, 1034, 1227, 1237, 1279, 1374, 1502, 1823
AluI AGCT 9 cut(s) 319, 499, 1034, 1227, 1237, 1279, 1374, 1502, 1823
Alw21I GWGCWC 2 cut(s) 1376, 1798
Alw26I GTCTC 2 cut(s) 337, 1352
Alw44I GTGCAC 1 cut(s) 1794
AlwI GGATC 3 cut(s) 1409, 1460, 1473
Ama87I CYCGRG 1 cut(s) 1035
Aor13HI TCCGGA 1 cut(s) 865
AoxI GGCC 6 cut(s) 3, 279, 286, 310, 588, 1396
ApaLI GTGCAC 1 cut(s) 1794
ApeKI GCWGC 2 cut(s) 1301, 1926
ApoI RAATTY 4 cut(s) 704, 772, 1517, 1668
ArsI GACNNNNNNTTYG 2 cut(s) 1304, 1336
Asp700I GAANNNNTTC 1 cut(s) 1085
AspLEI GCGC 2 cut(s) 269, 542
AsuII TTCGAA 1 cut(s) 432
AvaI CYCGRG 1 cut(s) 1035
BaeGI GKGCMC 2 cut(s) 1510, 1798
BalI TGGCCA 1 cut(s) 1398
BamHI GGATCC 1 cut(s) 1465
BanI GGYRCC 2 cut(s) 13, 266
BanII GRGCYC 1 cut(s) 1376
Bbv12I GWGCWC 2 cut(s) 1376, 1798
BbvI GCAGC 2 cut(s) 1313, 1913
BccI CCATC 6 cut(s) 269, 631, 643, 925, 991, 1651
BceAI ACGGC 1 cut(s) 1650
BciT130I CCWGG 4 cut(s) 278, 897, 1378, 1773
BclI TGATCA 1 cut(s) 582
BcoDI GTCTC 2 cut(s) 337, 1352
BfaI CTAG 3 cut(s) 1104, 1832, 1877
BfoI RGCGCY 2 cut(s) 270, 543
BfuAI ACCTGC 1 cut(s) 1330
BglI GCCNNNNNGGC 1 cut(s) 11
BisI GCNGC 6 cut(s) 204, 289, 313, 543, 1302, 1927
BlpI GCTNAGC 1 cut(s) 1335
BlsI GCNGC 6 cut(s) 205, 290, 314, 544, 1303, 1928
Bme1390I CCNGG 4 cut(s) 278, 897, 1378, 1773
BmeT110I CYCGRG 1 cut(s) 1035
BmiI GGNNCC 3 cut(s) 15, 268, 1467
BmrFI CCNGG 4 cut(s) 278, 897, 1378, 1773
BmrI ACTGGG 1 cut(s) 1808
BmsI GCATC 2 cut(s) 387, 1988
BmuI ACTGGG 1 cut(s) 1808
BpmI CTGGAG 1 cut(s) 260
Bpu1102I GCTNAGC 1 cut(s) 1335
Bpu14I TTCGAA 1 cut(s) 432
BpuEI CTTGAG 1 cut(s) 472
BsaHI GRCGYC 2 cut(s) 258, 267
BsaJI CCNNGG 1 cut(s) 543
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 6 cut(s) 9, 39, 317, 347, 965, 995
Bsc4I CCNNNNNNNGG 3 cut(s) 277, 295, 597
Bse118I RCCGGY 1 cut(s) 308
Bse1I ACTGG 3 cut(s) 969, 1673, 1803
BseAI TCCGGA 1 cut(s) 865
BseBI CCWGG 4 cut(s) 278, 897, 1378, 1773
BseDI CCNNGG 1 cut(s) 543
BseLI CCNNNNNNNGG 3 cut(s) 277, 295, 597
BseMII CTCAG 3 cut(s) 1316, 1326, 1721
BseNI ACTGG 3 cut(s) 969, 1673, 1803
BseRI GAGGAG 3 cut(s) 263, 460, 1223
BseSI GKGCMC 2 cut(s) 1510, 1798
BseX3I CGGCCG 1 cut(s) 310
BseXI GCAGC 2 cut(s) 1313, 1913
BseYI CCCAGC 1 cut(s) 905
Bsh1236I CGCG 1 cut(s) 545
Bsh1285I CGRYCG 1 cut(s) 313
BshFI GGCC 6 cut(s) 5, 281, 288, 312, 590, 1398
BshNI GGYRCC 2 cut(s) 13, 266
BsiEI CGRYCG 1 cut(s) 313
BsiHKAI GWGCWC 2 cut(s) 1376, 1798
BsiHKCI CYCGRG 1 cut(s) 1035
BsiSI CCGG 3 cut(s) 189, 309, 866
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 3 cut(s) 277, 295, 597
BsmAI GTCTC 2 cut(s) 337, 1352
BsmBI CGTCTC 1 cut(s) 337
BsmFI GGGAC 1 cut(s) 975
BsmI GAATGC 5 cut(s) 472, 685, 1087, 1387, 1690
BsnI GGCC 6 cut(s) 5, 281, 288, 312, 590, 1398
BsoBI CYCGRG 1 cut(s) 1035
Bsp119I TTCGAA 1 cut(s) 432
Bsp1286I GDGCHC 3 cut(s) 1376, 1510, 1798
Bsp13I TCCGGA 1 cut(s) 865
Bsp143I GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
Bsp1720I GCTNAGC 1 cut(s) 1335
BspANI GGCC 6 cut(s) 5, 281, 288, 312, 590, 1398
BspCNI CTCAG 3 cut(s) 1317, 1327, 1720
BspEI TCCGGA 1 cut(s) 865
BspFNI CGCG 1 cut(s) 545
BspLI GGNNCC 3 cut(s) 15, 268, 1467
BspMI ACCTGC 1 cut(s) 1330
BspPI GGATC 3 cut(s) 1409, 1460, 1473
BspT104I TTCGAA 1 cut(s) 432
BspT107I GGYRCC 2 cut(s) 13, 266
BsrFI RCCGGY 1 cut(s) 308
BsrI ACTGG 3 cut(s) 969, 1673, 1803
BssAI RCCGGY 1 cut(s) 308
BssECI CCNNGG 1 cut(s) 543
BssMI GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
BssNI GRCGYC 2 cut(s) 258, 267
Bst2UI CCWGG 4 cut(s) 278, 897, 1378, 1773
Bst4CI ACNGT 5 cut(s) 889, 1180, 1602, 1818, 1958
Bst6I CTCTTC 1 cut(s) 807
BstACI GRCGYC 2 cut(s) 258, 267
BstAPI GCANNNNNTGC 2 cut(s) 689, 1307
BstBI TTCGAA 1 cut(s) 432
BstC8I GCNNGC 3 cut(s) 317, 1867, 2002
BstDEI CTNAG 3 cut(s) 1325, 1335, 1707
BstDSI CCRYGG 1 cut(s) 543
BstEII GGTNACC 1 cut(s) 1174
BstENI CCTNNNNNAGG 1 cut(s) 275
BstFNI CGCG 1 cut(s) 545
BstH2I RGCGCY 2 cut(s) 270, 543
BstHHI GCGC 2 cut(s) 269, 542
BstKTI GATC 5 cut(s) 585, 1135, 1417, 1468, 1738
BstMAI GTCTC 2 cut(s) 337, 1352
BstMBI GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
BstMCI CGRYCG 1 cut(s) 313
BstNI CCWGG 4 cut(s) 278, 897, 1378, 1773
BstNSI RCATGY 1 cut(s) 1006
BstPI GGTNACC 1 cut(s) 1174
BstSCI CCNGG 4 cut(s) 276, 895, 1376, 1771
BstSLI GKGCMC 2 cut(s) 1510, 1798
BstUI CGCG 1 cut(s) 545
BstV1I GCAGC 2 cut(s) 1313, 1913
BstX2I RGATCY 2 cut(s) 1414, 1465
BstXI CCANNNNNNTGG 2 cut(s) 284, 1680
BstYI RGATCY 2 cut(s) 1414, 1465
BstZI CGGCCG 1 cut(s) 310
BsuRI GGCC 6 cut(s) 5, 281, 288, 312, 590, 1398
BtgI CCRYGG 1 cut(s) 543
BtsIMutI CAGTG 3 cut(s) 467, 1680, 1796
BveI ACCTGC 1 cut(s) 1330
Cac8I GCNNGC 3 cut(s) 317, 1867, 2002
CfoI GCGC 2 cut(s) 269, 542
Cfr10I RCCGGY 1 cut(s) 308
Cfr42I CCGCGG 1 cut(s) 546
CseI GACGC 2 cut(s) 266, 1817
CsiI ACCWGGT 1 cut(s) 1771
Csp6I GTAC 4 cut(s) 391, 484, 1021, 1438
CspCI CAANNNNNGTGG 2 cut(s) 574, 609
CviQI GTAC 4 cut(s) 391, 484, 1021, 1438
DdeI CTNAG 3 cut(s) 1325, 1335, 1707
DinI GGCGCC 1 cut(s) 268
DpnI GATC 5 cut(s) 584, 1134, 1416, 1467, 1737
DpnII GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
DraI TTTAAA 1 cut(s) 553
EaeI YGGCCR 3 cut(s) 286, 310, 1396
EagI CGGCCG 1 cut(s) 310
Eam1104I CTCTTC 1 cut(s) 807
EarI CTCTTC 1 cut(s) 807
EciI GGCGGA 1 cut(s) 190
Ecl136II GAGCTC 1 cut(s) 1374
EclXI CGGCCG 1 cut(s) 310
Eco147I AGGCCT 2 cut(s) 281, 590
Eco24I GRGCYC 1 cut(s) 1376
Eco52I CGGCCG 1 cut(s) 310
Eco53kI GAGCTC 1 cut(s) 1374
Eco88I CYCGRG 1 cut(s) 1035
Eco91I GGTNACC 1 cut(s) 1174
EcoICRI GAGCTC 1 cut(s) 1374
EcoNI CCTNNNNNAGG 1 cut(s) 275
EcoO65I GGTNACC 1 cut(s) 1174
EcoRI GAATTC 1 cut(s) 772
EcoRII CCWGG 4 cut(s) 276, 895, 1376, 1771
EcoT22I ATGCAT 1 cut(s) 685
EcoT38I GRGCYC 1 cut(s) 1376
EgeI GGCGCC 1 cut(s) 268
EheI GGCGCC 1 cut(s) 268
Esp3I CGTCTC 1 cut(s) 337
FalI AAGNNNNNCTT 2 cut(s) 1854, 1886
FaqI GGGAC 1 cut(s) 975
FauI CCCGC 2 cut(s) 383, 428
FbaI TGATCA 1 cut(s) 582
Fnu4HI GCNGC 6 cut(s) 204, 289, 313, 543, 1302, 1927
FriOI GRGCYC 1 cut(s) 1376
Fsp4HI GCNGC 6 cut(s) 204, 289, 313, 543, 1302, 1927
FspBI CTAG 3 cut(s) 1104, 1832, 1877
GlaI GCGC 2 cut(s) 268, 541
GluI GCNGC 6 cut(s) 204, 289, 313, 543, 1302, 1927
GsaI CCCAGC 1 cut(s) 909
GsuI CTGGAG 1 cut(s) 260
HaeII RGCGCY 2 cut(s) 270, 543
HaeIII GGCC 6 cut(s) 5, 281, 288, 312, 590, 1398
HapII CCGG 3 cut(s) 189, 309, 866
HgaI GACGC 2 cut(s) 266, 1817
HhaI GCGC 2 cut(s) 269, 542
Hin1I GRCGYC 2 cut(s) 258, 267
Hin6I GCGC 2 cut(s) 267, 540
HinP1I GCGC 2 cut(s) 267, 540
HinfI GANTC 7 cut(s) 416, 722, 937, 1211, 1540, 1577, 1764
HpaII CCGG 3 cut(s) 189, 309, 866
Hpy166II GTNNAC 3 cut(s) 1625, 1796, 1811
Hpy188I TCNGA 6 cut(s) 415, 664, 796, 1216, 1256, 1710
Hpy188III TCNNGA 6 cut(s) 489, 866, 1104, 1268, 1469, 1721
Hpy8I GTNNAC 3 cut(s) 1625, 1796, 1811
Hpy99I CGWCG 2 cut(s) 880, 1636
HpyAV CCTTC 9 cut(s) 68, 223, 241, 420, 428, 848, 1150, 1156, 1451
HpyCH4III ACNGT 5 cut(s) 889, 1180, 1602, 1818, 1958
HpyCH4IV ACGT 2 cut(s) 878, 2011
HpyF3I CTNAG 3 cut(s) 1325, 1335, 1707
HpySE526I ACGT 2 cut(s) 878, 2011
Hsp92I GRCGYC 2 cut(s) 258, 267
HspAI GCGC 2 cut(s) 267, 540
KasI GGCGCC 1 cut(s) 266
Kpn2I TCCGGA 1 cut(s) 865
Ksp22I TGATCA 1 cut(s) 582
KspI CCGCGG 1 cut(s) 546
Kzo9I GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
LmnI GCTCC 3 cut(s) 324, 1124, 1379
Lsp1109I GCAGC 2 cut(s) 1313, 1913
LweI GCATC 2 cut(s) 387, 1988
MabI ACCWGGT 1 cut(s) 1771
MaeI CTAG 3 cut(s) 1104, 1832, 1877
MaeII ACGT 2 cut(s) 878, 2011
MaeIII GTNAC 6 cut(s) 438, 883, 1174, 1191, 1244, 1700
MalI GATC 5 cut(s) 584, 1134, 1416, 1467, 1737
MboI GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
MboII GAAGA 6 cut(s) 93, 658, 824, 1075, 1514, 1673
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 2 cut(s) 1414, 1465
MhlI GDGCHC 3 cut(s) 1376, 1510, 1798
MlsI TGGCCA 1 cut(s) 1398
MluCI AATT 7 cut(s) 513, 562, 704, 772, 1517, 1668, 1995
MluNI TGGCCA 1 cut(s) 1398
Mly113I GGCGCC 1 cut(s) 267
MlyI GAGTC 1 cut(s) 1220
MmeI TCCRAC 2 cut(s) 167, 1194
Mox20I TGGCCA 1 cut(s) 1398
Mph1103I ATGCAT 1 cut(s) 685
MroI TCCGGA 1 cut(s) 865
MroXI GAANNNNTTC 1 cut(s) 1085
MscI TGGCCA 1 cut(s) 1398
MseI TTAA 6 cut(s) 528, 552, 729, 1025, 1184, 1961
MslI CAYNNNNRTG 2 cut(s) 386, 1907
Msp20I TGGCCA 1 cut(s) 1398
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 3 cut(s) 189, 309, 866
MspR9I CCNGG 4 cut(s) 278, 897, 1378, 1773
MssI GTTTAAAC 1 cut(s) 553
MunI CAATTG 1 cut(s) 513
Mva1269I GAATGC 5 cut(s) 472, 685, 1087, 1387, 1690
MvaI CCWGG 4 cut(s) 278, 897, 1378, 1773
MvnI CGCG 1 cut(s) 545
NarI GGCGCC 1 cut(s) 267
NdeII GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
NlaIV GGNNCC 3 cut(s) 15, 268, 1467
NmuCI GTSAC 2 cut(s) 883, 1174
NsiI ATGCAT 1 cut(s) 685
NspI RCATGY 1 cut(s) 1006
NspV TTCGAA 1 cut(s) 432
PaeR7I CTCGAG 1 cut(s) 1035
PaqCI CACCTGC 1 cut(s) 1330
PceI AGGCCT 2 cut(s) 281, 590
PciI ACATGT 1 cut(s) 1002
PctI GAATGC 5 cut(s) 472, 685, 1087, 1387, 1690
PdmI GAANNNNTTC 1 cut(s) 1085
PfeI GAWTC 6 cut(s) 416, 722, 937, 1540, 1577, 1764
PflFI GACNNNGTC 1 cut(s) 362
PfoI TCCNGGA 1 cut(s) 1376
PkrI GCNGC 6 cut(s) 205, 290, 314, 544, 1303, 1928
PleI GAGTC 1 cut(s) 1219
PluTI GGCGCC 1 cut(s) 270
PmeI GTTTAAAC 1 cut(s) 553
PpsI GAGTC 1 cut(s) 1219
PscI ACATGT 1 cut(s) 1002
PsiI TTATAA 1 cut(s) 1994
Psp124BI GAGCTC 1 cut(s) 1376
Psp6I CCWGG 4 cut(s) 276, 895, 1376, 1771
PspEI GGTNACC 1 cut(s) 1174
PspFI CCCAGC 1 cut(s) 905
PspGI CCWGG 4 cut(s) 276, 895, 1376, 1771
PspN4I GGNNCC 3 cut(s) 15, 268, 1467
PspXI VCTCGAGB 1 cut(s) 1035
PsuI RGATCY 2 cut(s) 1414, 1465
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 4 cut(s) 392, 485, 1022, 1439
RsaNI GTAC 4 cut(s) 391, 484, 1021, 1438
RseI CAYNNNNRTG 2 cut(s) 386, 1907
SacI GAGCTC 1 cut(s) 1376
SacII CCGCGG 1 cut(s) 546
SaqAI TTAA 6 cut(s) 528, 552, 729, 1025, 1184, 1961
SatI GCNGC 6 cut(s) 204, 289, 313, 543, 1302, 1927
Sau3AI GATC 5 cut(s) 582, 1132, 1414, 1465, 1735
SchI GAGTC 1 cut(s) 1220
ScrFI CCNGG 4 cut(s) 278, 897, 1378, 1773
SduI GDGCHC 3 cut(s) 1376, 1510, 1798
SexAI ACCWGGT 1 cut(s) 1771
SfaNI GCATC 2 cut(s) 387, 1988
SfoI GGCGCC 1 cut(s) 268
Sfr274I CTCGAG 1 cut(s) 1035
Sfr303I CCGCGG 1 cut(s) 546
SfuI TTCGAA 1 cut(s) 432
SgrBI CCGCGG 1 cut(s) 546
SlaI CTCGAG 1 cut(s) 1035
SmiMI CAYNNNNRTG 2 cut(s) 386, 1907
SmlI CTYRAG 2 cut(s) 487, 1035
SmoI CTYRAG 2 cut(s) 487, 1035
Sse9I AATT 7 cut(s) 513, 562, 704, 772, 1517, 1668, 1995
SseBI AGGCCT 2 cut(s) 281, 590
SspDI GGCGCC 1 cut(s) 266
SspMI CTAG 3 cut(s) 1104, 1832, 1877
SstI GAGCTC 1 cut(s) 1376
StuI AGGCCT 2 cut(s) 281, 590
StyD4I CCNGG 4 cut(s) 276, 895, 1376, 1771
TaaI ACNGT 5 cut(s) 889, 1180, 1602, 1818, 1958
TaiI ACGT 2 cut(s) 881, 2014
TaqI TCGA 7 cut(s) 303, 432, 776, 1036, 1631, 1734, 1744
TasI AATT 7 cut(s) 513, 562, 704, 772, 1517, 1668, 1995
TatI WGTACW 1 cut(s) 390
TauI GCSGC 4 cut(s) 206, 291, 315, 545
TfiI GAWTC 6 cut(s) 416, 722, 937, 1540, 1577, 1764
Tru1I TTAA 6 cut(s) 528, 552, 729, 1025, 1184, 1961
Tru9I TTAA 6 cut(s) 528, 552, 729, 1025, 1184, 1961
TscAI CASTG 3 cut(s) 467, 1680, 1803
TseFI GTSAC 2 cut(s) 883, 1174
TseI GCWGC 2 cut(s) 1301, 1926
Tsp45I GTSAC 2 cut(s) 883, 1174
TspGWI ACGGA 1 cut(s) 1043
TspRI CASTG 3 cut(s) 467, 1680, 1803
Tth111I GACNNNGTC 1 cut(s) 362
VneI GTGCAC 1 cut(s) 1794
XagI CCTNNNNNAGG 1 cut(s) 275
XapI RAATTY 4 cut(s) 704, 772, 1517, 1668
XbaI TCTAGA 1 cut(s) 1103
XceI RCATGY 1 cut(s) 1006
XcmI CCANNNNNNNNNTGG 1 cut(s) 1406
XhoI CTCGAG 1 cut(s) 1035
XmnI GAANNNNTTC 1 cut(s) 1085
XspI CTAG 3 cut(s) 1104, 1832, 1877
Zsp2I ATGCAT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.