Triosephosphate isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55440 |
| fragaria_vesca | FvH4_7g22530 |
| malus_domestica | MD00G1012200.v1.1 MD01G1134600.v1.1 MD07G1199300.v1.1 |
| prunus_persica | Prupe.2G236000_v2.0.a1 Prupe.2G236000_v2.0.a1 Prupe.6G076300_v2.0.a1 |
| pyrus_communis | pycom01g15530 pycom11g08880 |
| rosa_chinensis | RchiOBHm_Chr1g0367211 RchiOBHm_Chr5g0064961 |
| rosa_laevigata | RLG00000027289 RLG00000035744 |
| rosa_multiflora | Rmu_sc0003352.1_g000017 Rmu_sc0011000.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00016360 Rroxscaffold_4G00289520 |
| rosa_rugosa | Rorug01G0335500 Rorug05G0366800 |
| rosa_samantha | Rh1CG319000 Rh1DG335100 Rh5CG462800 |
| rosa_wichuraiana | Rw1G030410 Rw5G039960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 169, 188, 242, 699 |
| AclWI | GGATC | 1 cut(s) | 421 |
| AcsI | RAATTY | 2 cut(s) | 11, 256 |
| AcuI | CTGAAG | 4 cut(s) | 84, 111, 563, 618 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 187, 541, 715 |
| AflII | CTTAAG | 1 cut(s) | 710 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 470, 502 |
| AluBI | AGCT | 4 cut(s) | 89, 471, 704, 743 |
| AluI | AGCT | 4 cut(s) | 89, 471, 704, 743 |
| Alw26I | GTCTC | 1 cut(s) | 383 |
| AlwI | GGATC | 1 cut(s) | 421 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 425 |
| ApeKI | GCWGC | 2 cut(s) | 434, 605 |
| ApoI | RAATTY | 2 cut(s) | 11, 256 |
| AsuHPI | GGTGA | 2 cut(s) | 70, 265 |
| BanII | GRGCYC | 1 cut(s) | 131 |
| BbsI | GAAGAC | 1 cut(s) | 304 |
| BbvI | GCAGC | 2 cut(s) | 421, 592 |
| BccI | CCATC | 1 cut(s) | 677 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 323, 357 |
| BcoDI | GTCTC | 1 cut(s) | 383 |
| BfmI | CTRYAG | 2 cut(s) | 51, 744 |
| BfrI | CTTAAG | 1 cut(s) | 710 |
| BisI | GCNGC | 3 cut(s) | 189, 435, 606 |
| BlsI | GCNGC | 3 cut(s) | 190, 436, 607 |
| BmrI | ACTGGG | 1 cut(s) | 528 |
| BmsI | GCATC | 2 cut(s) | 237, 617 |
| BmuI | ACTGGG | 1 cut(s) | 528 |
| BpiI | GAAGAC | 1 cut(s) | 304 |
| Bpu10I | CCTNAGC | 2 cut(s) | 540, 546 |
| BpuEI | CTTGAG | 2 cut(s) | 342, 416 |
| BsaJI | CCNNGG | 1 cut(s) | 269 |
| BsaWI | WCCGGW | 1 cut(s) | 227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 621, 651 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 187, 541, 715 |
| Bse1I | ACTGG | 3 cut(s) | 35, 500, 523 |
| Bse3DI | GCAATG | 1 cut(s) | 46 |
| BseDI | CCNNGG | 1 cut(s) | 269 |
| BseGI | GGATG | 1 cut(s) | 688 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 187, 541, 715 |
| BseMI | GCAATG | 1 cut(s) | 46 |
| BseMII | CTCAG | 2 cut(s) | 554, 560 |
| BseNI | ACTGG | 3 cut(s) | 35, 500, 523 |
| BseXI | GCAGC | 2 cut(s) | 421, 592 |
| BseYI | CCCAGC | 1 cut(s) | 471 |
| BsiSI | CCGG | 2 cut(s) | 228, 716 |
| BslFI | GGGAC | 2 cut(s) | 80, 529 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 187, 541, 715 |
| BsmAI | GTCTC | 1 cut(s) | 383 |
| BsmFI | GGGAC | 2 cut(s) | 80, 529 |
| BsmI | GAATGC | 1 cut(s) | 264 |
| Bsp1286I | GDGCHC | 1 cut(s) | 131 |
| Bsp143I | GATC | 1 cut(s) | 413 |
| Bsp19I | CCATGG | 1 cut(s) | 269 |
| BspACI | CCGC | 4 cut(s) | 169, 188, 242, 699 |
| BspCNI | CTCAG | 2 cut(s) | 553, 559 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BspPI | GGATC | 1 cut(s) | 421 |
| BspTI | CTTAAG | 1 cut(s) | 710 |
| BsrDI | GCAATG | 1 cut(s) | 46 |
| BsrI | ACTGG | 3 cut(s) | 35, 500, 523 |
| BssECI | CCNNGG | 1 cut(s) | 269 |
| BssMI | GATC | 1 cut(s) | 413 |
| BssT1I | CCWWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 2 cut(s) | 421, 748 |
| BstAFI | CTTAAG | 1 cut(s) | 710 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 536 |
| BstC8I | GCNNGC | 1 cut(s) | 532 |
| BstDEI | CTNAG | 2 cut(s) | 540, 546 |
| BstDSI | CCRYGG | 1 cut(s) | 269 |
| BstF5I | GGATG | 1 cut(s) | 688 |
| BstKTI | GATC | 1 cut(s) | 416 |
| BstMAI | GTCTC | 1 cut(s) | 383 |
| BstMBI | GATC | 1 cut(s) | 413 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 431, 536, 602 |
| BstSFI | CTRYAG | 2 cut(s) | 51, 744 |
| BstV1I | GCAGC | 2 cut(s) | 421, 592 |
| BstV2I | GAAGAC | 1 cut(s) | 304 |
| BtgI | CCRYGG | 1 cut(s) | 269 |
| BtsCI | GGATG | 1 cut(s) | 688 |
| BtsIMutI | CAGTG | 2 cut(s) | 426, 753 |
| Cac8I | GCNNGC | 1 cut(s) | 532 |
| CaiI | CAGNNNCTG | 1 cut(s) | 425 |
| CviAII | CATG | 2 cut(s) | 182, 270 |
| DdeI | CTNAG | 2 cut(s) | 540, 546 |
| DpnI | GATC | 1 cut(s) | 415 |
| DpnII | GATC | 1 cut(s) | 413 |
| EciI | GGCGGA | 1 cut(s) | 714 |
| Eco130I | CCWWGG | 1 cut(s) | 269 |
| Eco24I | GRGCYC | 1 cut(s) | 131 |
| Eco57I | CTGAAG | 4 cut(s) | 84, 111, 563, 618 |
| EcoT14I | CCWWGG | 1 cut(s) | 269 |
| EcoT38I | GRGCYC | 1 cut(s) | 131 |
| ErhI | CCWWGG | 1 cut(s) | 269 |
| FaeI | CATG | 2 cut(s) | 185, 273 |
| FaiI | YATR | 5 cut(s) | 183, 271, 348, 495, 627 |
| FaqI | GGGAC | 2 cut(s) | 80, 529 |
| FatI | CATG | 2 cut(s) | 181, 269 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 435, 606 |
| FokI | GGATG | 1 cut(s) | 695 |
| FriOI | GRGCYC | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 435, 606 |
| GluI | GCNGC | 3 cut(s) | 189, 435, 606 |
| GsaI | CCCAGC | 1 cut(s) | 475 |
| HapII | CCGG | 2 cut(s) | 228, 716 |
| Hin1II | CATG | 2 cut(s) | 185, 273 |
| HinfI | GANTC | 3 cut(s) | 314, 391, 407 |
| HpaII | CCGG | 2 cut(s) | 228, 716 |
| HphI | GGTGA | 2 cut(s) | 70, 265 |
| Hpy188I | TCNGA | 3 cut(s) | 103, 175, 292 |
| Hpy188III | TCNNGA | 4 cut(s) | 395, 411, 548, 581 |
| Hpy99I | CGWCG | 1 cut(s) | 23 |
| HpyAV | CCTTC | 2 cut(s) | 108, 517 |
| HpyCH4III | ACNGT | 2 cut(s) | 421, 748 |
| HpyCH4V | TGCA | 6 cut(s) | 39, 53, 350, 530, 608, 654 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 431, 536, 602 |
| HpyF3I | CTNAG | 2 cut(s) | 540, 546 |
| Hsp92II | CATG | 2 cut(s) | 185, 273 |
| Kzo9I | GATC | 1 cut(s) | 413 |
| LmnI | GCTCC | 2 cut(s) | 644, 701 |
| Lsp1109I | GCAGC | 2 cut(s) | 421, 592 |
| LweI | GCATC | 2 cut(s) | 237, 617 |
| MaeIII | GTNAC | 1 cut(s) | 70 |
| MalI | GATC | 1 cut(s) | 415 |
| MboI | GATC | 1 cut(s) | 413 |
| MboII | GAAGA | 6 cut(s) | 7, 73, 76, 116, 309, 763 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MhlI | GDGCHC | 1 cut(s) | 131 |
| MluCI | AATT | 6 cut(s) | 11, 196, 256, 510, 618, 659 |
| MlyI | GAGTC | 2 cut(s) | 323, 385 |
| MnlI | CCTC | 5 cut(s) | 49, 109, 141, 226, 623 |
| MseI | TTAA | 3 cut(s) | 156, 365, 711 |
| MspCI | CTTAAG | 1 cut(s) | 710 |
| MspI | CCGG | 2 cut(s) | 228, 716 |
| MunI | CAATTG | 1 cut(s) | 510 |
| Mva1269I | GAATGC | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 431, 536, 602 |
| NcoI | CCATGG | 1 cut(s) | 269 |
| NdeII | GATC | 1 cut(s) | 413 |
| NlaIII | CATG | 2 cut(s) | 185, 273 |
| PctI | GAATGC | 1 cut(s) | 264 |
| PfeI | GAWTC | 1 cut(s) | 407 |
| PkrI | GCNGC | 3 cut(s) | 190, 436, 607 |
| PleI | GAGTC | 2 cut(s) | 322, 385 |
| PpsI | GAGTC | 2 cut(s) | 322, 385 |
| PspFI | CCCAGC | 1 cut(s) | 471 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| PstNI | CAGNNNCTG | 1 cut(s) | 425 |
| SaqAI | TTAA | 3 cut(s) | 156, 365, 711 |
| SatI | GCNGC | 3 cut(s) | 189, 435, 606 |
| Sau3AI | GATC | 1 cut(s) | 413 |
| SchI | GAGTC | 2 cut(s) | 323, 385 |
| SduI | GDGCHC | 1 cut(s) | 131 |
| SfaNI | GCATC | 2 cut(s) | 237, 617 |
| SfcI | CTRYAG | 2 cut(s) | 51, 744 |
| SmlI | CTYRAG | 3 cut(s) | 357, 395, 710 |
| SmoI | CTYRAG | 3 cut(s) | 357, 395, 710 |
| Sse9I | AATT | 6 cut(s) | 11, 196, 256, 510, 618, 659 |
| SsiI | CCGC | 4 cut(s) | 169, 188, 242, 699 |
| StyI | CCWWGG | 1 cut(s) | 269 |
| TaaI | ACNGT | 2 cut(s) | 421, 748 |
| TaqI | TCGA | 3 cut(s) | 416, 467, 726 |
| TaqII | GACCGA | 1 cut(s) | 272 |
| TasI | AATT | 6 cut(s) | 11, 196, 256, 510, 618, 659 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 1 cut(s) | 407 |
| Tru1I | TTAA | 3 cut(s) | 156, 365, 711 |
| Tru9I | TTAA | 3 cut(s) | 156, 365, 711 |
| TscAI | CASTG | 2 cut(s) | 426, 753 |
| TseI | GCWGC | 2 cut(s) | 434, 605 |
| TspDTI | ATGAA | 3 cut(s) | 99, 510, 712 |
| TspRI | CASTG | 2 cut(s) | 426, 753 |
| Vha464I | CTTAAG | 1 cut(s) | 710 |
| XapI | RAATTY | 2 cut(s) | 11, 256 |