Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004890

Physical Location & Seq

Genomic Coordinates Forward (+)

48916466 .. 48920359

Gene Structure 3894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0366800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGATAAGTCTTGGATGCATGCTGATAGCAGATCACGCGCATATGAGTTAGGAGTTGAGGAATTCCTTAGGTTTGCTGTACAGAATGCTACTGATGTAAATAAAATATGCTGTCCCTGTGCGAAATGTGGGAGCATAGATGGGATGTTCTCAGCCAGGGTCATAAAAGATCATCTATATTTTAATGGTGTAGATGAGAGTTACAAAGATTGGGTATGGCACGGGGAACCATCTAGGGCAACGGTGAATGCCAATGAAGGGGGATCTGAAGCTACTGTAGATATGGTAGAAGATGGTGATGCAGTAGATAATATAGGATTGGGAGATCAGGAAGAAAAAGGGGCTAGTGAAGATGAGGAGTTTTTTGAAAATGGTGAGGAAGAGCAGTATTCTGTAGAATCGAATGACTTCATGAGGGAGAAGATACTAGCAGAAACTAATGCAATTTGGGAGGAGAGGTTGAAGAAGTTAGAAGCAAGGGTGTTGGGGAAGCCTATGTTAACTGAATCCCCCAAAGATTCCACCATTGATAGGCAAGTTTCGTCTGTACAAGGAAGTTCAAATATGCATGAGAAGGCTGCCAACACAATTGAAAAACAAATTCCCTCCACTGTTAGAAAGTCTTTGGATTTAGAACTTCATGACAAGGAGCCTGTGGAAGCTGTGAATCCCATTGTGAATTTGAATGCTACTGAGAAGGGTCAGCCAATTGGCCCTGTGGTTGTTGATCTGGAAATCCAGAAGGGTGAATTTCAGGCACAGACAATTGGGAAAGAGTGCCATTTAGCTTTAGGTTCAACCGATAACGTTGTAGCTATTGCAACAGTTATAGAAGTCAATAATGAAAATAACAGCCACCTTATCCATGGTGTTCCATTGGGCGAGGGAAACATGCGTGTATCGATTGTACGCTCTCTAGTGGATGAAGCCAAGCTTCCATTTCCAATCGAAAATGAAATAATGACGGTTCGTGATGCTATTGGGACTTATGTGGCTTGGCCTAAAAACCTTATTGTTTTTCCAGTACAGTTTCAGAAAATGGCAGCAAAGAGTAGAGGAATGAGAAAGAGAAAAAGTGCAGAAGAAGATGAGTATCATGAAGAAGATATAGACATGGCATCATTGCCAACAACCCTCCCTCCCTCCCTTAAAGTGGTATGCATATGGGCCAAAGAAACACTCACAAATGGGAAGACAATTATCTGCAATTTTGATGAAAAGATTTTTGGACATTCGTTCAAAACTTGTGTGAATAAAAACGATGTTAATAACTTTGTTACCATGAAGGAAGTATCGGGCAGCTGCATCAGCATCTATATGAGCCACCTTTATGGTGTGTTGAAGAAGTCAAAGATGGTGGACATGGTTGGATTTATGGATAGTACAAAAACTGGTGCCATTGGGTGTGGCAATCCAATTGAGCGTTCCCGTGCAATAGCCGATAGGCTGAAAAAGGAAGTATCGGGCAGCTGCATCAGCATCTATATGAGCCACCTTTATGGTGTGTTGAAGAAGTCAAAGATGGTGGACATGGTTGGATTTATGGATAGTACAAAAACTGGTGCCATTGGGTGTGGCAATCCAATTGAGCGTTGCCGTGCAATAGCCGATAGGCTGAAAAAGGCAAAGCGTGGCCAGATTATTTTGTTGCCATATAACTCAGGTTGTCACTGGATGCTGACTGTAATAAACTCTGAAGAAGACAATGTCTACTTCATGGACCCATTAAAGAGGAGACTAATTACGGGAGAGTGGAAGAACATTGTTGACAACGGCATCAAAATATATAATGCACAAGTCAAAAGGCAGGGCAGAAAAGCAACTACCTGGAAAAACTGTGCGGGTATTCCGGAGCAAAAGACCGACAAGGATTGTGGATATTTTATAATGAGATACATGAAGGAAATAGTGGAGGATAAAACGTTGGACATTTTCAGCAAGTGGGAGAGAAGAAGTAAAGCAACATATTCCCAGGAGGATATCGATGTGGTCAGAACTGAGTGGGCAAAGTTTGTGGTTAAAACATATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0010119 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0140096 GO:1901564 GO:1902456 GO:1902458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

677

Amino Acids

76.11

Weight (kDa)

5.73

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transpos_assoc	PF13963	3 - 76	5.1e-18	Transposase-associated domain
DUF8039	PF26133	257 - 340	1.8e-12	Domain of unknown function (DUF8039)
Peptidase_C48	PF02902	541 - 670	1.3e-12	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07570 AT1G07570 AT1G07570 AT1G07570 AT2G28930 AT2G28930 AT2G28930
fragaria_vesca	FvH4_3g36200 FvH4_3g36200 FvH4_3g36200 FvH4_3g36200
malus_domestica	MD00G1012300.v1.1 MD03G1092200.v1.1
prunus_persica	Prupe.6G076200_v2.0.a1
pyrus_communis	pycom03g07390 pycom11g08870
rosa_chinensis	RchiOBHm_Chr5g0064971
rosa_laevigata	RLG00000013060 RLG00000022531 RLG00000023667 RLG00000035745
rosa_multiflora	Rmu_sc0003352.1_g000018
rosa_roxburghii	Rroxscaffold_1G00016340
rosa_rugosa	Rorug05G0366800 Rorug05G0366900 Rorug05G0367000
rosa_samantha	Rh5AG425400 Rh5BG440300 Rh5CG462900
rosa_wichuraiana	Rw5G039970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1886
AccB1I	GGYRCC	2 cut(s)	1394, 1562
AccI	GTMKAC	1 cut(s)	1710
AccII	CGCG	1 cut(s)	39
AccIII	TCCGGA	1 cut(s)	1849
AciI	CCGC	1 cut(s)	1841
AclI	AACGTT	2 cut(s)	807, 1922
AclWI	GGATC	1 cut(s)	271
AcoI	YGGCCR	1 cut(s)	1633
AcsI	RAATTY	4 cut(s)	62, 600, 679, 749
AcuI	CTGAAG	2 cut(s)	288, 1716
AfaI	GTAC	6 cut(s)	81, 549, 909, 1026, 1384, 1552
AfiI	CCNNNNNNNGG	3 cut(s)	258, 531, 1153
AgsI	TTSAA	9 cut(s)	368, 463, 561, 593, 685, 798, 1240, 1342, 1510
AjnI	CCWGG	3 cut(s)	155, 1826, 1971
AjuI	GAANNNNNNNTTGG	4 cut(s)	1209, 1241, 1408, 1440
AluBI	AGCT	7 cut(s)	272, 662, 788, 815, 934, 1302, 1470
AluI	AGCT	7 cut(s)	272, 662, 788, 815, 934, 1302, 1470
Alw26I	GTCTC	1 cut(s)	1729
AlwI	GGATC	1 cut(s)	271
Aor13HI	TCCGGA	1 cut(s)	1849
AoxI	GGCC	4 cut(s)	712, 998, 1167, 1633
ApeKI	GCWGC	6 cut(s)	578, 1043, 1299, 1302, 1467, 1470
ApoI	RAATTY	4 cut(s)	62, 600, 679, 749
Asp700I	GAANNNNTTC	1 cut(s)	407
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	3 cut(s)	713, 1167, 1720
AsuHPI	GGTGA	4 cut(s)	256, 308, 386, 758
AvaII	GGWCC	1 cut(s)	1720
AxyI	CCTNAGG	1 cut(s)	68
BalI	TGGCCA	1 cut(s)	1635
BanI	GGYRCC	2 cut(s)	1394, 1562
BbsI	GAAGAC	2 cut(s)	1199, 1707
BbvI	GCAGC	6 cut(s)	565, 1055, 1289, 1311, 1457, 1479
BccI	CCATC	5 cut(s)	134, 238, 287, 1348, 1516
BceAI	ACGGC	2 cut(s)	1581, 1789
BciT130I	CCWGG	3 cut(s)	157, 1828, 1973
BcoDI	GTCTC	1 cut(s)	1729
BfaI	CTAG	4 cut(s)	234, 345, 428, 917
BfmI	CTRYAG	2 cut(s)	276, 393
BisI	GCNGC	6 cut(s)	579, 1044, 1300, 1303, 1468, 1471
BlsI	GCNGC	6 cut(s)	580, 1045, 1301, 1304, 1469, 1472
Bme1390I	CCNGG	3 cut(s)	157, 1828, 1973
Bme18I	GGWCC	1 cut(s)	1720
BmgT120I	GGNCC	3 cut(s)	713, 1167, 1720
BmiI	GGNNCC	5 cut(s)	228, 651, 1396, 1564, 1722
BmrFI	CCNGG	3 cut(s)	157, 1828, 1973
BpiI	GAAGAC	2 cut(s)	1199, 1707
Bsa29I	ATCGAT	2 cut(s)	902, 1983
BsaBI	GATNNNNATC	1 cut(s)	1092
BsaJI	CCNNGG	3 cut(s)	156, 865, 1971
BsaWI	WCCGGW	1 cut(s)	1849
BsaXI	ACNNNNNCTCC	4 cut(s)	443, 473, 1123, 1153
Bsc4I	CCNNNNNNNGG	3 cut(s)	258, 531, 1153
Bse1I	ACTGG	4 cut(s)	1022, 1396, 1564, 1676
Bse21I	CCTNAGG	1 cut(s)	68
Bse3DI	GCAATG	1 cut(s)	1121
Bse8I	GATNNNNATC	1 cut(s)	1092
BseAI	TCCGGA	1 cut(s)	1849
BseBI	CCWGG	3 cut(s)	157, 1828, 1973
BseCI	ATCGAT	2 cut(s)	902, 1983
BseDI	CCNNGG	3 cut(s)	156, 865, 1971
BseGI	GGATG	4 cut(s)	21, 150, 928, 1680
BseJI	GATNNNNATC	1 cut(s)	1092
BseLI	CCNNNNNNNGG	3 cut(s)	258, 531, 1153
BseMI	GCAATG	1 cut(s)	1121
BseMII	CTCAG	4 cut(s)	165, 684, 1674, 1989
BseNI	ACTGG	4 cut(s)	1022, 1396, 1564, 1676
BseRI	GAGGAG	3 cut(s)	371, 467, 1747
BseXI	GCAGC	6 cut(s)	565, 1055, 1289, 1311, 1457, 1479
BsgI	GTGCAG	1 cut(s)	1098
Bsh1236I	CGCG	1 cut(s)	39
BshFI	GGCC	4 cut(s)	714, 1000, 1169, 1635
BshNI	GGYRCC	2 cut(s)	1394, 1562
BshVI	ATCGAT	2 cut(s)	902, 1983
BsiSI	CCGG	1 cut(s)	1850
BslFI	GGGAC	2 cut(s)	99, 997
BslI	CCNNNNNNNGG	3 cut(s)	258, 531, 1153
BsmAI	GTCTC	1 cut(s)	1729
BsmFI	GGGAC	2 cut(s)	99, 997
BsmI	GAATGC	3 cut(s)	91, 253, 691
BsnI	GGCC	4 cut(s)	714, 1000, 1169, 1635
Bsp13I	TCCGGA	1 cut(s)	1849
Bsp1407I	TGTACA	2 cut(s)	79, 547
Bsp143I	GATC	5 cut(s)	32, 169, 263, 325, 727
Bsp19I	CCATGG	1 cut(s)	865
BspACI	CCGC	1 cut(s)	1841
BspANI	GGCC	4 cut(s)	714, 1000, 1169, 1635
BspCNI	CTCAG	4 cut(s)	164, 685, 1673, 1990
BspDI	ATCGAT	2 cut(s)	902, 1983
BspEI	TCCGGA	1 cut(s)	1849
BspFNI	CGCG	1 cut(s)	39
BspHI	TCATGA	3 cut(s)	411, 640, 1096
BspLI	GGNNCC	5 cut(s)	228, 651, 1396, 1564, 1722
BspPI	GGATC	1 cut(s)	271
BspQI	GCTCTTC	1 cut(s)	375
BspT107I	GGYRCC	2 cut(s)	1394, 1562
BsrDI	GCAATG	1 cut(s)	1121
BsrGI	TGTACA	2 cut(s)	79, 547
BsrI	ACTGG	4 cut(s)	1022, 1396, 1564, 1676
BssECI	CCNNGG	3 cut(s)	156, 865, 1971
BssMI	GATC	5 cut(s)	32, 169, 263, 325, 727
BssT1I	CCWWGG	1 cut(s)	865
Bst2UI	CCWGG	3 cut(s)	157, 1828, 1973
Bst4CI	ACNGT	8 cut(s)	244, 277, 613, 826, 967, 1029, 1684, 1838
Bst6I	CTCTTC	1 cut(s)	375
BstAUI	TGTACA	2 cut(s)	79, 547
BstC8I	GCNNGC	1 cut(s)	21
BstDEI	CTNAG	5 cut(s)	68, 151, 693, 1660, 1998
BstDSI	CCRYGG	1 cut(s)	865
BstF5I	GGATG	4 cut(s)	21, 150, 928, 1680
BstFNI	CGCG	1 cut(s)	39
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	5 cut(s)	35, 172, 266, 328, 730
BstMAI	GTCTC	1 cut(s)	1729
BstMBI	GATC	5 cut(s)	32, 169, 263, 325, 727
BstMWI	GCNNNNNNNGC	3 cut(s)	36, 1308, 1476
BstNI	CCWGG	3 cut(s)	157, 1828, 1973
BstNSI	RCATGY	2 cut(s)	23, 895
BstSCI	CCNGG	3 cut(s)	155, 1826, 1971
BstSFI	CTRYAG	2 cut(s)	276, 393
BstUI	CGCG	1 cut(s)	39
BstV1I	GCAGC	6 cut(s)	565, 1055, 1289, 1311, 1457, 1479
BstV2I	GAAGAC	2 cut(s)	1199, 1707
BstX2I	RGATCY	1 cut(s)	263
BstXI	CCANNNNNNTGG	2 cut(s)	1331, 1499
BstYI	RGATCY	1 cut(s)	263
Bsu15I	ATCGAT	2 cut(s)	902, 1983
Bsu36I	CCTNAGG	1 cut(s)	68
BsuRI	GGCC	4 cut(s)	714, 1000, 1169, 1635
BsuTUI	ATCGAT	2 cut(s)	902, 1983
BtgI	CCRYGG	1 cut(s)	865
BtsCI	GGATG	4 cut(s)	21, 150, 928, 1680
BtsIMutI	CAGTG	2 cut(s)	609, 1669
Cac8I	GCNNGC	1 cut(s)	21
CciI	TCATGA	3 cut(s)	411, 640, 1096
CfoI	GCGC	1 cut(s)	41
Cfr13I	GGNCC	3 cut(s)	713, 1167, 1720
ClaI	ATCGAT	2 cut(s)	902, 1983
Csp6I	GTAC	6 cut(s)	80, 548, 908, 1025, 1383, 1551
CspCI	CAANNNNNGTGG	8 cut(s)	1338, 1373, 1506, 1541, 1855, 1890, 1995, 2030
CviQI	GTAC	6 cut(s)	80, 548, 908, 1025, 1383, 1551
DdeI	CTNAG	5 cut(s)	68, 151, 693, 1660, 1998
DpnI	GATC	5 cut(s)	34, 171, 265, 327, 729
DpnII	GATC	5 cut(s)	32, 169, 263, 325, 727
EaeI	YGGCCR	1 cut(s)	1633
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
Eco130I	CCWWGG	1 cut(s)	865
Eco32I	GATATC	1 cut(s)	1981
Eco47I	GGWCC	1 cut(s)	1720
Eco57I	CTGAAG	2 cut(s)	288, 1716
Eco81I	CCTNAGG	1 cut(s)	68
EcoRI	GAATTC	1 cut(s)	62
EcoRII	CCWGG	3 cut(s)	155, 1826, 1971
EcoRV	GATATC	1 cut(s)	1981
EcoT14I	CCWWGG	1 cut(s)	865
EcoT22I	ATGCAT	3 cut(s)	21, 570, 1163
ErhI	CCWWGG	1 cut(s)	865
FalI	AAGNNNNNCTT	2 cut(s)	918, 950
FaqI	GGGAC	2 cut(s)	99, 997
FauI	CCCGC	1 cut(s)	1834
FauNDI	CATATG	2 cut(s)	43, 1163
FblI	GTMKAC	1 cut(s)	1710
Fnu4HI	GCNGC	6 cut(s)	579, 1044, 1300, 1303, 1468, 1471
FokI	GGATG	4 cut(s)	28, 157, 935, 1687
Fsp4HI	GCNGC	6 cut(s)	579, 1044, 1300, 1303, 1468, 1471
FspBI	CTAG	4 cut(s)	234, 345, 428, 917
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	6 cut(s)	579, 1044, 1300, 1303, 1468, 1471
HaeIII	GGCC	4 cut(s)	714, 1000, 1169, 1635
HapII	CCGG	1 cut(s)	1850
HhaI	GCGC	1 cut(s)	41
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HincII	GTYRAC	2 cut(s)	501, 1768
HindII	GTYRAC	2 cut(s)	501, 1768
HindIII	AAGCTT	1 cut(s)	932
HinfI	GANTC	4 cut(s)	398, 506, 518, 667
HpaI	GTTAAC	1 cut(s)	501
HpaII	CCGG	1 cut(s)	1850
HphI	GGTGA	4 cut(s)	256, 308, 386, 758
Hpy166II	GTNNAC	5 cut(s)	501, 1360, 1528, 1711, 1768
Hpy188I	TCNGA	4 cut(s)	268, 1035, 1696, 1994
Hpy188III	TCNNGA	8 cut(s)	329, 412, 641, 731, 739, 971, 1097, 1850
Hpy8I	GTNNAC	5 cut(s)	501, 1360, 1528, 1711, 1768
HpyAV	CCTTC	6 cut(s)	251, 568, 691, 736, 1279, 1894
HpyCH4III	ACNGT	8 cut(s)	244, 277, 613, 826, 967, 1029, 1684, 1838
HpyCH4IV	ACGT	2 cut(s)	807, 1922
HpyF10VI	GCNNNNNNNGC	3 cut(s)	36, 1308, 1476
HpyF3I	CTNAG	5 cut(s)	68, 151, 693, 1660, 1998
HpySE526I	ACGT	2 cut(s)	807, 1922
HspAI	GCGC	1 cut(s)	39
Kpn2I	TCCGGA	1 cut(s)	1849
KspAI	GTTAAC	1 cut(s)	501
Kzo9I	GATC	5 cut(s)	32, 169, 263, 325, 727
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	3 cut(s)	132, 649, 1852
Lsp1109I	GCAGC	6 cut(s)	565, 1055, 1289, 1311, 1457, 1479
MaeI	CTAG	4 cut(s)	234, 345, 428, 917
MaeII	ACGT	2 cut(s)	807, 1922
MaeIII	GTNAC	3 cut(s)	200, 1276, 1667
MalI	GATC	5 cut(s)	34, 171, 265, 327, 729
MboI	GATC	5 cut(s)	32, 169, 263, 325, 727
MfeI	CAATTG	5 cut(s)	588, 708, 765, 1416, 1584
MflI	RGATCY	1 cut(s)	263
MlsI	TGGCCA	1 cut(s)	1635
MluNI	TGGCCA	1 cut(s)	1635
MmeI	TCCRAC	3 cut(s)	1348, 1516, 1905
Mox20I	TGGCCA	1 cut(s)	1635
Mph1103I	ATGCAT	3 cut(s)	21, 570, 1163
MroI	TCCGGA	1 cut(s)	1849
MroXI	GAANNNNTTC	1 cut(s)	407
MscI	TGGCCA	1 cut(s)	1635
MseI	TTAA	6 cut(s)	183, 500, 1149, 1266, 1727, 2019
MslI	CAYNNNNRTG	4 cut(s)	1316, 1329, 1484, 1497
Msp20I	TGGCCA	1 cut(s)	1635
MspA1I	CMGCKG	2 cut(s)	1302, 1470
MspI	CCGG	1 cut(s)	1850
MspR9I	CCNGG	3 cut(s)	157, 1828, 1973
MunI	CAATTG	5 cut(s)	588, 708, 765, 1416, 1584
Mva1269I	GAATGC	3 cut(s)	91, 253, 691
MvaI	CCWGG	3 cut(s)	157, 1828, 1973
MvnI	CGCG	1 cut(s)	39
MwoI	GCNNNNNNNGC	3 cut(s)	36, 1308, 1476
NcoI	CCATGG	1 cut(s)	865
NdeI	CATATG	2 cut(s)	43, 1163
NdeII	GATC	5 cut(s)	32, 169, 263, 325, 727
NlaIV	GGNNCC	5 cut(s)	228, 651, 1396, 1564, 1722
NmuCI	GTSAC	1 cut(s)	1667
NsiI	ATGCAT	3 cut(s)	21, 570, 1163
NspI	RCATGY	2 cut(s)	23, 895
PaeI	GCATGC	1 cut(s)	23
PagI	TCATGA	3 cut(s)	411, 640, 1096
PciSI	GCTCTTC	1 cut(s)	375
PctI	GAATGC	3 cut(s)	91, 253, 691
PdmI	GAANNNNTTC	1 cut(s)	407
PfeI	GAWTC	4 cut(s)	398, 506, 518, 667
PflFI	GACNNNGTC	1 cut(s)	1706
PkrI	GCNGC	6 cut(s)	580, 1045, 1301, 1304, 1469, 1472
PsiI	TTATAA	1 cut(s)	1886
Psp1406I	AACGTT	2 cut(s)	807, 1922
Psp6I	CCWGG	3 cut(s)	155, 1826, 1971
PspGI	CCWGG	3 cut(s)	155, 1826, 1971
PspN4I	GGNNCC	5 cut(s)	228, 651, 1396, 1564, 1722
PspPI	GGNCC	3 cut(s)	713, 1167, 1720
PsuI	RGATCY	1 cut(s)	263
PsyI	GACNNNGTC	1 cut(s)	1706
PvuII	CAGCTG	2 cut(s)	1302, 1470
RsaI	GTAC	6 cut(s)	81, 549, 909, 1026, 1384, 1552
RsaNI	GTAC	6 cut(s)	80, 548, 908, 1025, 1383, 1551
RseI	CAYNNNNRTG	4 cut(s)	1316, 1329, 1484, 1497
SapI	GCTCTTC	1 cut(s)	375
SaqAI	TTAA	6 cut(s)	183, 500, 1149, 1266, 1727, 2019
SatI	GCNGC	6 cut(s)	579, 1044, 1300, 1303, 1468, 1471
Sau3AI	GATC	5 cut(s)	32, 169, 263, 325, 727
Sau96I	GGNCC	3 cut(s)	713, 1167, 1720
ScrFI	CCNGG	3 cut(s)	157, 1828, 1973
SfcI	CTRYAG	2 cut(s)	276, 393
SinI	GGWCC	1 cut(s)	1720
SmiMI	CAYNNNNRTG	4 cut(s)	1316, 1329, 1484, 1497
SphI	GCATGC	1 cut(s)	23
SsiI	CCGC	1 cut(s)	1841
SspMI	CTAG	4 cut(s)	234, 345, 428, 917
StyD4I	CCNGG	3 cut(s)	155, 1826, 1971
StyI	CCWWGG	1 cut(s)	865
TaaI	ACNGT	8 cut(s)	244, 277, 613, 826, 967, 1029, 1684, 1838
TaiI	ACGT	2 cut(s)	810, 1925
TaqI	TCGA	4 cut(s)	401, 902, 948, 1983
TaqII	GACCGA	1 cut(s)	1877
TatI	WGTACW	5 cut(s)	79, 547, 1024, 1382, 1550
TfiI	GAWTC	4 cut(s)	398, 506, 518, 667
Tru1I	TTAA	6 cut(s)	183, 500, 1149, 1266, 1727, 2019
Tru9I	TTAA	6 cut(s)	183, 500, 1149, 1266, 1727, 2019
TscAI	CASTG	2 cut(s)	616, 1676
TseFI	GTSAC	1 cut(s)	1667
TseI	GCWGC	6 cut(s)	578, 1043, 1299, 1302, 1467, 1470
Tsp45I	GTSAC	1 cut(s)	1667
TspRI	CASTG	2 cut(s)	616, 1676
Tth111I	GACNNNGTC	1 cut(s)	1706
VpaK11BI	GGWCC	1 cut(s)	1720
XapI	RAATTY	4 cut(s)	62, 600, 679, 749
XceI	RCATGY	2 cut(s)	23, 895
XcmI	CCANNNNNNNNNTGG	1 cut(s)	863
XmiI	GTMKAC	1 cut(s)	1710
XmnI	GAANNNNTTC	1 cut(s)	407
XspI	CTAG	4 cut(s)	234, 345, 428, 917
Zsp2I	ATGCAT	3 cut(s)	21, 570, 1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.