Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004890

Physical Location & Seq

Genomic Coordinates Reverse (-)

2331136 .. 2333767

Gene Structure 2632 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G07570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGGGGATTTGCTTGAGTGCTCAGGTCAAAGCTGAGAGCTCAGGAGCGAGTACGAAGTATGACGCCAAAGATATAGGAAGTCTTGGGAGCAAGGCTTCGTCTGTGTCTGTAAGACCAAGCCCTCGAACTGAGGGTGAGATCTTACAGTCTCCAAATCTCAAGAGTTTTAGCTTTGCTGAGCTTAAATCAGCAACCAGGAATTTTAGACCAGACAGTGTGCTTGGTGAAGGTGGATTCGGTTGTGTTTTCAAAGGATGGATTGATGAGAAGTCTCTCACTGCCTCAAGACCAGGCACGGGTTTGGTTATTGCCGTCAAAAAGCTTAACCAAGATGGTTGGCAAGGTCACCAGGAGTGGCTGGCTGAAGTGAATTACCTTGGTCAGTTTTCTCACCGTCACCTTGTGAAGCTGATTGGTTATTGCCTAGAGGATGAGCACCGTCTTCTTGTTTACGAGTTCATGCCTCGGGGTAGCTTGGAGAATCATCTTTTCAGGAGAGGTTTGTACTTCCAACCGTTATCTTGGAAACTTCGGTTGAAAGTTGCTCTTGGTGCTGCAAAGGGACTTGCTTTTCTTCACAGTTCCGAGACAAGAGTGATATACCGAGATTTCAAGACTTCTAATATCCTTCTTGACTCGGAGTACAACGCAAAGCTTTCTGATTTTGGGTTGGCTAAGGATGGGCCAATAGGTGATAAAAGTCATGTCTCTACACGAGTCATGGGTACACACGGATATGCAGCTCCTGAATACCTTGCAACCGGTCATCTAACAACAAAGAGTGATGTCTATAGCTTCGGGGTTGTCCTTCTGGAGCTGTTGTCTGGTCGTCGAGCAGTGGACAAGAACCGCCCATCTGGAGAGAGGAACCTTGTGGAGTGGGCTAAACCATACCTCGTAAACAAAAGAAAGATATTCCGAGTCATTGATAATCGTCTTCAGGACCAGTACTCTATGGAAGAAGCATGTAAAGTGGCTACTCTGTCTCTGAGATGTCTCACCACAGAGATTAAGCTGAGACCAAACATGAGCGAGGTTGTTTCGCACCTCGAACACATTCAGTCTTTAAATGCTGCTATAGGAGGAAATATGGATAAAACAGATAGAAGAATGCGTAGGAGAAGTGACAGTGTTGTCAGCAAAAAAGTGAATGCAGGTTTTGCTCGACAGACTGCTGTTGGCAGTACAGTTGTTGCTTATCCTCGCCCATCAGCCTCGCCACTGTATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

410

Amino Acids

45.52

Weight (kDa)

9.6

Isoelectric Point (pI)

41.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	71 - 349	6.5e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	72 - 350	1.3e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07570 AT1G07570 AT1G07570 AT1G07570 AT2G28930 AT2G28930 AT2G28930
fragaria_vesca	FvH4_3g36200 FvH4_3g36200 FvH4_3g36200 FvH4_3g36200
malus_domestica	MD00G1012300.v1.1 MD03G1092200.v1.1
prunus_persica	Prupe.6G076200_v2.0.a1
pyrus_communis	pycom03g07390 pycom11g08870
rosa_chinensis	RchiOBHm_Chr5g0064971
rosa_laevigata	RLG00000013060 RLG00000022531 RLG00000023667 RLG00000035745
rosa_multiflora	Rmu_sc0003352.1_g000018
rosa_roxburghii	Rroxscaffold_1G00016340
rosa_rugosa	Rorug05G0366800 Rorug05G0366900 Rorug05G0367000
rosa_samantha	Rh5AG425400 Rh5BG440300 Rh5CG462900
rosa_wichuraiana	Rw5G039970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1133
Acc36I	ACCTGC	1 cut(s)	1145
AciI	CCGC	1 cut(s)	850
AcsI	RAATTY	1 cut(s)	199
AcuI	CTGAAG	2 cut(s)	384, 923
AcyI	GRCGYC	1 cut(s)	63
AdeI	CACNNNGTG	1 cut(s)	403
AfaI	GTAC	6 cut(s)	52, 506, 644, 727, 950, 1186
AfiI	CCNNNNNNNGG	1 cut(s)	296
AgeI	ACCGGT	1 cut(s)	761
AgsI	TTSAA	3 cut(s)	250, 538, 613
AjnI	CCWGG	3 cut(s)	194, 289, 348
Alw21I	GWGCWC	3 cut(s)	22, 41, 438
Alw26I	GTCTC	7 cut(s)	153, 276, 581, 712, 990, 1001, 1012
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	1 cut(s)	465
AoxI	GGCC	1 cut(s)	683
ApeKI	GCWGC	3 cut(s)	554, 740, 1073
ApoI	RAATTY	1 cut(s)	199
AsiGI	ACCGGT	1 cut(s)	761
Asp700I	GAANNNNTTC	1 cut(s)	1056
AspS9I	GGNCC	2 cut(s)	683, 943
AsuHPI	GGTGA	7 cut(s)	146, 236, 338, 383, 389, 704, 991
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	1 cut(s)	943
BanII	GRGCYC	1 cut(s)	41
BauI	CACGAG	1 cut(s)	714
BbsI	GAAGAC	2 cut(s)	434, 929
Bbv12I	GWGCWC	3 cut(s)	22, 41, 438
BbvI	GCAGC	3 cut(s)	541, 752, 1060
BccI	CCATC	5 cut(s)	249, 326, 674, 862, 1216
BceAI	ACGGC	1 cut(s)	296
BciT130I	CCWGG	3 cut(s)	196, 291, 350
BcoDI	GTCTC	7 cut(s)	153, 276, 581, 712, 990, 1001, 1012
BfaI	CTAG	1 cut(s)	425
BfmI	CTRYAG	2 cut(s)	790, 1077
BfuAI	ACCTGC	1 cut(s)	1145
BglII	AGATCT	1 cut(s)	138
BisI	GCNGC	3 cut(s)	555, 741, 1074
BlpI	GCTNAGC	1 cut(s)	177
BlsI	GCNGC	3 cut(s)	556, 742, 1075
BmcAI	AGTACT	1 cut(s)	950
Bme1390I	CCNGG	3 cut(s)	196, 291, 350
Bme18I	GGWCC	1 cut(s)	943
BmeT110I	CYCGRG	1 cut(s)	465
BmgT120I	GGNCC	2 cut(s)	683, 943
BmiI	GGNNCC	1 cut(s)	869
BmrFI	CCNGG	3 cut(s)	196, 291, 350
BpiI	GAAGAC	2 cut(s)	434, 929
BpmI	CTGGAG	2 cut(s)	833, 879
Bpu10I	CCTNAGC	3 cut(s)	21, 40, 675
Bpu1102I	GCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	3 cut(s)	34, 143, 268
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	1 cut(s)	1012
BsaJI	CCNNGG	2 cut(s)	376, 464
BsaWI	WCCGGW	1 cut(s)	761
BsaXI	ACNNNNNCTCC	2 cut(s)	806, 836
Bsc4I	CCNNNNNNNGG	1 cut(s)	296
Bse118I	RCCGGY	1 cut(s)	761
Bse1I	ACTGG	1 cut(s)	946
BseBI	CCWGG	3 cut(s)	196, 291, 350
BseDI	CCNNGG	2 cut(s)	376, 464
BseGI	GGATG	3 cut(s)	260, 436, 685
BseLI	CCNNNNNNNGG	1 cut(s)	296
BseMII	CTCAG	7 cut(s)	24, 35, 54, 120, 168, 980, 1007
BseNI	ACTGG	1 cut(s)	946
BseXI	GCAGC	3 cut(s)	541, 752, 1060
BshFI	GGCC	1 cut(s)	685
BshTI	ACCGGT	1 cut(s)	761
BsiHKAI	GWGCWC	3 cut(s)	22, 41, 438
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	1 cut(s)	762
BslFI	GGGAC	1 cut(s)	576
BslI	CCNNNNNNNGG	1 cut(s)	296
BsmAI	GTCTC	7 cut(s)	153, 276, 581, 712, 990, 1001, 1012
BsmFI	GGGAC	1 cut(s)	576
BsmI	GAATGC	2 cut(s)	1116, 1156
BsnI	GGCC	1 cut(s)	685
Bso31I	GGTCTC	1 cut(s)	1012
BsoBI	CYCGRG	1 cut(s)	465
Bsp1286I	GDGCHC	3 cut(s)	22, 41, 438
Bsp143I	GATC	1 cut(s)	138
Bsp1720I	GCTNAGC	1 cut(s)	177
BspACI	CCGC	1 cut(s)	850
BspANI	GGCC	1 cut(s)	685
BspCNI	CTCAG	7 cut(s)	25, 34, 53, 121, 169, 981, 1008
BspLI	GGNNCC	1 cut(s)	869
BspMI	ACCTGC	1 cut(s)	1145
BspTNI	GGTCTC	1 cut(s)	1012
BsrFI	RCCGGY	1 cut(s)	761
BsrI	ACTGG	1 cut(s)	946
BssAI	RCCGGY	1 cut(s)	761
BssECI	CCNNGG	2 cut(s)	376, 464
BssMI	GATC	1 cut(s)	138
BssNI	GRCGYC	1 cut(s)	63
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	1 cut(s)	376
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	3 cut(s)	196, 291, 350
Bst4CI	ACNGT	9 cut(s)	147, 215, 395, 440, 516, 581, 1130, 1189, 1224
BstACI	GRCGYC	1 cut(s)	63
BstAPI	GCANNNNNTGC	1 cut(s)	1160
BstC8I	GCNNGC	1 cut(s)	360
BstDEI	CTNAG	8 cut(s)	21, 33, 40, 129, 177, 675, 989, 1016
BstEII	GGTNACC	1 cut(s)	344
BstF5I	GGATG	3 cut(s)	260, 436, 685
BstKTI	GATC	1 cut(s)	141
BstMAI	GTCTC	7 cut(s)	153, 276, 581, 712, 990, 1001, 1012
BstMBI	GATC	1 cut(s)	138
BstMWI	GCNNNNNNNGC	2 cut(s)	551, 1160
BstNI	CCWGG	3 cut(s)	196, 291, 350
BstNSI	RCATGY	1 cut(s)	969
BstPI	GGTNACC	1 cut(s)	344
BstSCI	CCNGG	3 cut(s)	194, 289, 348
BstSFI	CTRYAG	2 cut(s)	790, 1077
BstV1I	GCAGC	3 cut(s)	541, 752, 1060
BstV2I	GAAGAC	2 cut(s)	434, 929
BstX2I	RGATCY	1 cut(s)	138
BstYI	RGATCY	1 cut(s)	138
BsuRI	GGCC	1 cut(s)	685
BtsCI	GGATG	3 cut(s)	260, 436, 685
BtsI	GCAGTG	2 cut(s)	276, 843
BtsIMutI	CAGTG	5 cut(s)	220, 276, 843, 1135, 1220
BveI	ACCTGC	1 cut(s)	1145
Cac8I	GCNNGC	1 cut(s)	360
CaiI	CAGNNNCTG	1 cut(s)	746
Cfr10I	RCCGGY	1 cut(s)	761
Cfr13I	GGNCC	2 cut(s)	683, 943
CseI	GACGC	1 cut(s)	71
Csp6I	GTAC	6 cut(s)	51, 505, 643, 726, 949, 1185
CspAI	ACCGGT	1 cut(s)	761
CviAII	CATG	5 cut(s)	460, 704, 721, 966, 1027
CviQI	GTAC	6 cut(s)	51, 505, 643, 726, 949, 1185
DdeI	CTNAG	8 cut(s)	21, 33, 40, 129, 177, 675, 989, 1016
DpnI	GATC	1 cut(s)	140
DpnII	GATC	1 cut(s)	138
DraI	TTTAAA	1 cut(s)	1068
DraIII	CACNNNGTG	1 cut(s)	403
DrdI	GACNNNNNNGTC	1 cut(s)	1133
DseDI	GACNNNNNNGTC	1 cut(s)	1133
Ecl136II	GAGCTC	1 cut(s)	39
Eco130I	CCWWGG	1 cut(s)	376
Eco24I	GRGCYC	1 cut(s)	41
Eco31I	GGTCTC	1 cut(s)	1012
Eco47I	GGWCC	1 cut(s)	943
Eco53kI	GAGCTC	1 cut(s)	39
Eco57I	CTGAAG	2 cut(s)	384, 923
Eco88I	CYCGRG	1 cut(s)	465
Eco91I	GGTNACC	1 cut(s)	344
EcoICRI	GAGCTC	1 cut(s)	39
EcoO65I	GGTNACC	1 cut(s)	344
EcoRII	CCWGG	3 cut(s)	194, 289, 348
EcoT14I	CCWWGG	1 cut(s)	376
EcoT38I	GRGCYC	1 cut(s)	41
ErhI	CCWWGG	1 cut(s)	376
FaeI	CATG	5 cut(s)	463, 707, 724, 969, 1030
FalI	AAGNNNNNCTT	2 cut(s)	531, 563
FaqI	GGGAC	1 cut(s)	576
FatI	CATG	5 cut(s)	459, 703, 720, 965, 1026
Fnu4HI	GCNGC	3 cut(s)	555, 741, 1074
FokI	GGATG	3 cut(s)	267, 443, 692
FriOI	GRGCYC	1 cut(s)	41
Fsp4HI	GCNGC	3 cut(s)	555, 741, 1074
FspBI	CTAG	1 cut(s)	425
GluI	GCNGC	3 cut(s)	555, 741, 1074
GsuI	CTGGAG	2 cut(s)	833, 879
HaeIII	GGCC	1 cut(s)	685
HapII	CCGG	1 cut(s)	762
HgaI	GACGC	1 cut(s)	71
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	5 cut(s)	463, 707, 724, 969, 1030
HindIII	AAGCTT	2 cut(s)	320, 653
HinfI	GANTC	5 cut(s)	234, 481, 635, 717, 921
HpaII	CCGG	1 cut(s)	762
HphI	GGTGA	7 cut(s)	146, 236, 338, 383, 389, 704, 991
Hpy166II	GTNNAC	4 cut(s)	451, 728, 841, 901
Hpy188I	TCNGA	5 cut(s)	586, 640, 661, 920, 990
Hpy8I	GTNNAC	4 cut(s)	451, 728, 841, 901
Hpy99I	CGWCG	1 cut(s)	834
HpyAV	CCTTC	3 cut(s)	221, 638, 818
HpyCH4III	ACNGT	9 cut(s)	147, 215, 395, 440, 516, 581, 1130, 1189, 1224
HpyCH4V	TGCA	4 cut(s)	557, 740, 758, 1154
HpyF10VI	GCNNNNNNNGC	2 cut(s)	551, 1160
HpyF3I	CTNAG	8 cut(s)	21, 33, 40, 129, 177, 675, 989, 1016
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	5 cut(s)	463, 707, 724, 969, 1030
Kzo9I	GATC	1 cut(s)	138
LmnI	GCTCC	4 cut(s)	44, 87, 748, 814
Lsp1109I	GCAGC	3 cut(s)	541, 752, 1060
MaeI	CTAG	1 cut(s)	425
MaeIII	GTNAC	3 cut(s)	344, 395, 1124
MalI	GATC	1 cut(s)	140
MboI	GATC	1 cut(s)	138
MboII	GAAGA	5 cut(s)	434, 566, 929, 971, 1119
MflI	RGATCY	1 cut(s)	138
MhlI	GDGCHC	3 cut(s)	22, 41, 438
MluCI	AATT	2 cut(s)	199, 370
MlyI	GAGTC	3 cut(s)	629, 726, 930
MmeI	TCCRAC	1 cut(s)	535
MroXI	GAANNNNTTC	1 cut(s)	1056
MseI	TTAA	4 cut(s)	183, 324, 1011, 1067
MslI	CAYNNNNRTG	1 cut(s)	735
MspI	CCGG	1 cut(s)	762
MspR9I	CCNGG	3 cut(s)	196, 291, 350
Mva1269I	GAATGC	2 cut(s)	1116, 1156
MvaI	CCWGG	3 cut(s)	196, 291, 350
MwoI	GCNNNNNNNGC	2 cut(s)	551, 1160
NdeII	GATC	1 cut(s)	138
NlaIII	CATG	5 cut(s)	463, 707, 724, 969, 1030
NlaIV	GGNNCC	1 cut(s)	869
NmuCI	GTSAC	3 cut(s)	344, 395, 1124
NspI	RCATGY	1 cut(s)	969
PctI	GAATGC	2 cut(s)	1116, 1156
PdmI	GAANNNNTTC	1 cut(s)	1056
PfeI	GAWTC	2 cut(s)	234, 481
PinAI	ACCGGT	1 cut(s)	761
PkrI	GCNGC	3 cut(s)	556, 742, 1075
PleI	GAGTC	3 cut(s)	629, 725, 929
PpsI	GAGTC	3 cut(s)	629, 725, 929
Psp124BI	GAGCTC	1 cut(s)	41
Psp6I	CCWGG	3 cut(s)	194, 289, 348
PspEI	GGTNACC	1 cut(s)	344
PspGI	CCWGG	3 cut(s)	194, 289, 348
PspN4I	GGNNCC	1 cut(s)	869
PspPI	GGNCC	2 cut(s)	683, 943
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	1 cut(s)	138
RsaI	GTAC	6 cut(s)	52, 506, 644, 727, 950, 1186
RsaNI	GTAC	6 cut(s)	51, 505, 643, 726, 949, 1185
RseI	CAYNNNNRTG	1 cut(s)	735
SacI	GAGCTC	1 cut(s)	41
SaqAI	TTAA	4 cut(s)	183, 324, 1011, 1067
SatI	GCNGC	3 cut(s)	555, 741, 1074
Sau3AI	GATC	1 cut(s)	138
Sau96I	GGNCC	2 cut(s)	683, 943
ScaI	AGTACT	1 cut(s)	950
SchI	GAGTC	3 cut(s)	629, 726, 930
ScrFI	CCNGG	3 cut(s)	196, 291, 350
SduI	GDGCHC	3 cut(s)	22, 41, 438
SfcI	CTRYAG	2 cut(s)	790, 1077
SinI	GGWCC	1 cut(s)	943
SmiMI	CAYNNNNRTG	1 cut(s)	735
SmlI	CTYRAG	3 cut(s)	13, 158, 283
SmoI	CTYRAG	3 cut(s)	13, 158, 283
Sse9I	AATT	2 cut(s)	199, 370
SsiI	CCGC	1 cut(s)	850
SspMI	CTAG	1 cut(s)	425
SstI	GAGCTC	1 cut(s)	41
StyD4I	CCNGG	3 cut(s)	194, 289, 348
StyI	CCWWGG	1 cut(s)	376
TaaI	ACNGT	9 cut(s)	147, 215, 395, 440, 516, 581, 1130, 1189, 1224
TaqI	TCGA	4 cut(s)	124, 832, 1050, 1165
TasI	AATT	2 cut(s)	199, 370
TatI	WGTACW	4 cut(s)	504, 642, 948, 1184
TfiI	GAWTC	2 cut(s)	234, 481
Tru1I	TTAA	4 cut(s)	183, 324, 1011, 1067
Tru9I	TTAA	4 cut(s)	183, 324, 1011, 1067
TscAI	CASTG	5 cut(s)	220, 283, 843, 1135, 1227
TseFI	GTSAC	3 cut(s)	344, 395, 1124
TseI	GCWGC	3 cut(s)	554, 740, 1073
Tsp45I	GTSAC	3 cut(s)	344, 395, 1124
TspDTI	ATGAA	1 cut(s)	448
TspGWI	ACGGA	1 cut(s)	747
TspRI	CASTG	5 cut(s)	220, 283, 843, 1135, 1227
VpaK11BI	GGWCC	1 cut(s)	943
XapI	RAATTY	1 cut(s)	199
XceI	RCATGY	1 cut(s)	969
XmnI	GAANNNNTTC	1 cut(s)	1056
XspI	CTAG	1 cut(s)	425
ZrmI	AGTACT	1 cut(s)	950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.