FvH4_3g36200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
31012832 .. 31016286
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36200.t5

Sequence Viewer

Length: 1224 bp
ATGGGGGTCTGCTGGAGCGCCCAGATCAAAGCTGAGAGCCCGTTAAACACAGGTTCAAAGTTTGTTAGTAATGATGGCAGTACAAGCAGCAAGGTCTCATCATTTTCAGCACCTCCAACTCCTCGGACGGAGGGTGAGATCTTGCAGTCAACCAATTTGAGGAGCTTCAGTTTTGCTGACCTCAAATTGGCCACCAGGAATTTCCGTCCTGATAGTGTGTTAGGAGAAGGCGGCTTTGGTTCTGTTTTTAAAGGGTGGATTGATGAAAATTCATTTACAGCTGCAAAGCCTGGGACTGGCATAGTTTTGGCTGTGAAGAGGCTTAACCAAGAAAGTTTCCAGGGTCACAGGGAGTGGTTGGCAGAAGTGAATTATTTGGGACAGTTCCATCATCCTAATCTTGTGAAACTAATTGGCTATTGCTTGGAAGATGAGCAGCGCCTTTTGGTATATGAATTCATGCCCCGAGGCAGCCTGGAAAATCATTTGTTCAGGAGAGGTTCATATTTTCAACCTCTTTCTTGGATCCTCCGGATGAAGGTTGCCCTCGGTGCTGCAAAGGGGCTGGCCTTTTTGCATAGTGCTGAAACAAGGGTGATATATCGAGACTTCAAGACGTCTAATATCCTGCTTGATTCGAACTACAATGCAAAGCTGTCAGATTTTGGCTTGGCCAAGGATGGGCCAACGGGTGACAAAAGCCACGTCTCAACTAGGGTGATGGGGACATATGGATATGCTGCACCAGAATATCTAGCCACAGGTCATCTTACTGCCAAGAGTGATATCTATAGTTTTGGAGTTGTCTTGTTGGAAATGTTATCTGGTCGGAGAGCAGTTGACAAGAATCGGCCATCTGGGGAGCACAATCTGGTTGAATGGGCTAAACCCTTCCTGGCAAACAAGCGCAAGATCTTTCGTGTCATAGACAACCGTCTAGAAGGCCAGTATTCAATGGATGGAGCTTATAAGGCAGCTACCCTTGCATTACGATGCCTATCGACAGAATCCAAGCTCAGGCCAACAATGGATGAAGTTGTAAAAGCACTGGAGCAACTGCAGGATTCCAATGTCACCACCAGCAATCAGAGCCATGCACACAGGATGCGCAGGCGAAGTGCAGACGATGTTAGCAAAGCTAGGCGGGCATCTATAGATGAAGCTAACAAAGCAAGGAATACTGTTGCTTATCCCCGGCCGTCTGCTTCACCCCTATATGCTTAA

Protein Analysis

408

Amino Acids

45.25

Weight (kDa)

9.53

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 197 1.1e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 26 - 195 1.8e-29 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 969
AatII GACGTC 1 cut(s) 620
Acc16I TGCGCA 1 cut(s) 1109
AccIII TCCGGA 1 cut(s) 531
AciI CCGC 2 cut(s) 231, 1144
AclWI GGATC 2 cut(s) 520, 533
AcoI YGGCCR 4 cut(s) 189, 672, 851, 1196
AcsI RAATTY 3 cut(s) 199, 268, 455
AcuI CTGAAG 1 cut(s) 151
AcyI GRCGYC 1 cut(s) 617
AfaI GTAC 1 cut(s) 82
AfiI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
AgsI TTSAA 5 cut(s) 57, 512, 613, 878, 954
AjiI CACGTC 1 cut(s) 706
AjnI CCWGG 5 cut(s) 194, 289, 339, 474, 894
AjuI GAANNNNNNNTTGG 2 cut(s) 219, 251
AluBI AGCT 9 cut(s) 32, 165, 281, 655, 965, 977, 1015, 1139, 1163
AluI AGCT 9 cut(s) 32, 165, 281, 655, 965, 977, 1015, 1139, 1163
Alw21I GWGCWC 1 cut(s) 867
Alw26I GTCTC 3 cut(s) 100, 600, 712
AlwI GGATC 2 cut(s) 520, 533
Ama87I CYCGRG 1 cut(s) 465
Aor13HI TCCGGA 1 cut(s) 531
AoxI GGCC 8 cut(s) 189, 567, 672, 683, 851, 943, 1019, 1196
ApeKI GCWGC 7 cut(s) 87, 281, 436, 471, 554, 740, 974
ApoI RAATTY 3 cut(s) 199, 268, 455
ArsI GACNNNNNNTTYG 2 cut(s) 690, 722
AspLEI GCGC 4 cut(s) 20, 441, 909, 1110
AspS9I GGNCC 1 cut(s) 683
AsuC2I CCSGG 1 cut(s) 1195
AsuHPI GGTGA 6 cut(s) 146, 607, 704, 730, 1066, 1200
AsuII TTCGAA 1 cut(s) 638
AvaI CYCGRG 1 cut(s) 465
BalI TGGCCA 2 cut(s) 191, 674
BamHI GGATCC 1 cut(s) 525
BanII GRGCYC 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 867
BbvI GCAGC 7 cut(s) 99, 268, 448, 483, 541, 727, 986
BccI CCATC 6 cut(s) 68, 396, 674, 715, 862, 953
BceAI ACGGC 1 cut(s) 1183
BciT130I CCWGG 5 cut(s) 196, 291, 341, 476, 896
BcnI CCSGG 1 cut(s) 1195
BcoDI GTCTC 3 cut(s) 100, 600, 712
BfaI CTAG 4 cut(s) 714, 755, 938, 1140
BfmI CTRYAG 3 cut(s) 790, 1058, 1152
BfoI RGCGCY 2 cut(s) 21, 442
BglII AGATCT 2 cut(s) 138, 912
BisI GCNGC 8 cut(s) 88, 232, 282, 437, 472, 555, 741, 975
BlsI GCNGC 8 cut(s) 89, 233, 283, 438, 473, 556, 742, 976
Bme1390I CCNGG 6 cut(s) 196, 291, 341, 476, 896, 1195
BmeT110I CYCGRG 1 cut(s) 465
BmgBI CACGTC 1 cut(s) 706
BmgT120I GGNCC 1 cut(s) 683
BmiI GGNNCC 1 cut(s) 527
BmrFI CCNGG 6 cut(s) 196, 291, 341, 476, 896, 1195
BmsI GCATC 3 cut(s) 983, 1095, 1157
BoxI GACNNNNGTC 1 cut(s) 933
BpmI CTGGAG 2 cut(s) 34, 1070
Bpu10I CCTNAGC 1 cut(s) 1016
Bpu14I TTCGAA 1 cut(s) 638
BpuMI CCSGG 1 cut(s) 1195
BsaBI GATNNNNATC 1 cut(s) 997
BsaHI GRCGYC 1 cut(s) 617
BsaI GGTCTC 1 cut(s) 100
BsaJI CCNNGG 7 cut(s) 122, 290, 340, 466, 547, 675, 1193
BsaWI WCCGGW 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bsc4I CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
Bse1I ACTGG 3 cut(s) 301, 946, 1053
Bse8I GATNNNNATC 1 cut(s) 997
BseAI TCCGGA 1 cut(s) 531
BseBI CCWGG 5 cut(s) 196, 291, 341, 476, 896
BseDI CCNNGG 7 cut(s) 122, 290, 340, 466, 547, 675, 1193
BseGI GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BseJI GATNNNNATC 1 cut(s) 997
BseLI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
BseMII CTCAG 2 cut(s) 24, 1030
BseNI ACTGG 3 cut(s) 301, 946, 1053
BseRI GAGGAG 2 cut(s) 111, 175
BseX3I CGGCCG 1 cut(s) 1196
BseXI GCAGC 7 cut(s) 99, 268, 448, 483, 541, 727, 986
BsgI GTGCAG 2 cut(s) 726, 1140
Bsh1285I CGRYCG 1 cut(s) 1199
BshFI GGCC 8 cut(s) 191, 569, 674, 685, 853, 945, 1021, 1198
BsiEI CGRYCG 1 cut(s) 1199
BsiHKAI GWGCWC 1 cut(s) 867
BsiHKCI CYCGRG 1 cut(s) 465
BsiSI CCGG 2 cut(s) 532, 1195
BslFI GGGAC 3 cut(s) 307, 393, 739
BslI CCNNNNNNNGG 6 cut(s) 159, 187, 296, 538, 681, 1017
BsmAI GTCTC 3 cut(s) 100, 600, 712
BsmBI CGTCTC 1 cut(s) 712
BsmFI GGGAC 3 cut(s) 307, 393, 739
BsnI GGCC 8 cut(s) 191, 569, 674, 685, 853, 945, 1021, 1198
Bso31I GGTCTC 1 cut(s) 100
BsoBI CYCGRG 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 638
Bsp1286I GDGCHC 2 cut(s) 41, 867
Bsp13I TCCGGA 1 cut(s) 531
Bsp143I GATC 4 cut(s) 24, 138, 525, 912
BspACI CCGC 2 cut(s) 231, 1144
BspANI GGCC 8 cut(s) 191, 569, 674, 685, 853, 945, 1021, 1198
BspCNI CTCAG 2 cut(s) 25, 1029
BspEI TCCGGA 1 cut(s) 531
BspLI GGNNCC 1 cut(s) 527
BspMAI CTGCAG 1 cut(s) 1062
BspPI GGATC 2 cut(s) 520, 533
BspT104I TTCGAA 1 cut(s) 638
BspTNI GGTCTC 1 cut(s) 100
BsrI ACTGG 3 cut(s) 301, 946, 1053
BssECI CCNNGG 7 cut(s) 122, 290, 340, 466, 547, 675, 1193
BssMI GATC 4 cut(s) 24, 138, 525, 912
BssNI GRCGYC 1 cut(s) 617
BssT1I CCWWGG 1 cut(s) 675
Bst2UI CCWGG 5 cut(s) 196, 291, 341, 476, 896
Bst4CI ACNGT 3 cut(s) 384, 935, 1183
Bst6I CTCTTC 1 cut(s) 311
BstACI GRCGYC 1 cut(s) 617
BstBI TTCGAA 1 cut(s) 638
BstC8I GCNNGC 3 cut(s) 567, 1112, 1146
BstDEI CTNAG 2 cut(s) 33, 1016
BstF5I GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BstH2I RGCGCY 2 cut(s) 21, 442
BstHHI GCGC 4 cut(s) 20, 441, 909, 1110
BstKTI GATC 4 cut(s) 27, 141, 528, 915
BstMAI GTCTC 3 cut(s) 100, 600, 712
BstMBI GATC 4 cut(s) 24, 138, 525, 912
BstMCI CGRYCG 1 cut(s) 1199
BstMWI GCNNNNNNNGC 7 cut(s) 84, 551, 971, 983, 1089, 1145, 1169
BstNI CCWGG 5 cut(s) 196, 291, 341, 476, 896
BstPAI GACNNNNGTC 1 cut(s) 933
BstSCI CCNGG 6 cut(s) 194, 289, 339, 474, 894, 1193
BstSFI CTRYAG 3 cut(s) 790, 1058, 1152
BstV1I GCAGC 7 cut(s) 99, 268, 448, 483, 541, 727, 986
BstX2I RGATCY 3 cut(s) 138, 525, 912
BstYI RGATCY 3 cut(s) 138, 525, 912
BstZI CGGCCG 1 cut(s) 1196
BsuRI GGCC 8 cut(s) 191, 569, 674, 685, 853, 945, 1021, 1198
BtrI CACGTC 1 cut(s) 706
BtsCI GGATG 6 cut(s) 391, 540, 685, 964, 1036, 1110
BtsIMutI CAGTG 1 cut(s) 1046
Cac8I GCNNGC 3 cut(s) 567, 1112, 1146
CfoI GCGC 4 cut(s) 20, 441, 909, 1110
Cfr13I GGNCC 1 cut(s) 683
Csp6I GTAC 1 cut(s) 81
CviAII CATG 2 cut(s) 460, 1094
CviQI GTAC 1 cut(s) 81
DdeI CTNAG 2 cut(s) 33, 1016
DpnI GATC 4 cut(s) 26, 140, 527, 914
DpnII GATC 4 cut(s) 24, 138, 525, 912
DraI TTTAAA 1 cut(s) 250
EaeI YGGCCR 4 cut(s) 189, 672, 851, 1196
EagI CGGCCG 1 cut(s) 1196
Eam1104I CTCTTC 1 cut(s) 311
EarI CTCTTC 1 cut(s) 311
EclXI CGGCCG 1 cut(s) 1196
Eco130I CCWWGG 1 cut(s) 675
Eco24I GRGCYC 1 cut(s) 41
Eco31I GGTCTC 1 cut(s) 100
Eco32I GATATC 1 cut(s) 787
Eco52I CGGCCG 1 cut(s) 1196
Eco57I CTGAAG 1 cut(s) 151
Eco88I CYCGRG 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 5 cut(s) 194, 289, 339, 474, 894
EcoRV GATATC 1 cut(s) 787
EcoT14I CCWWGG 1 cut(s) 675
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 1 cut(s) 675
Esp3I CGTCTC 1 cut(s) 712
FaeI CATG 2 cut(s) 463, 1097
FaqI GGGAC 3 cut(s) 307, 393, 739
FatI CATG 2 cut(s) 459, 1093
FauI CCCGC 1 cut(s) 1137
FauNDI CATATG 1 cut(s) 730
Fnu4HI GCNGC 8 cut(s) 88, 232, 282, 437, 472, 555, 741, 975
FokI GGATG 6 cut(s) 378, 547, 692, 971, 1043, 1117
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 8 cut(s) 88, 232, 282, 437, 472, 555, 741, 975
FspBI CTAG 4 cut(s) 714, 755, 938, 1140
FspI TGCGCA 1 cut(s) 1109
GlaI GCGC 4 cut(s) 19, 440, 908, 1109
GluI GCNGC 8 cut(s) 88, 232, 282, 437, 472, 555, 741, 975
GsuI CTGGAG 2 cut(s) 34, 1070
HaeII RGCGCY 2 cut(s) 21, 442
HaeIII GGCC 8 cut(s) 191, 569, 674, 685, 853, 945, 1021, 1198
HapII CCGG 2 cut(s) 532, 1195
HhaI GCGC 4 cut(s) 20, 441, 909, 1110
Hin1I GRCGYC 1 cut(s) 617
Hin1II CATG 2 cut(s) 463, 1097
Hin6I GCGC 4 cut(s) 18, 439, 907, 1108
HinP1I GCGC 4 cut(s) 18, 439, 907, 1108
HincII GTYRAC 2 cut(s) 150, 841
HindII GTYRAC 2 cut(s) 150, 841
HinfI GANTC 4 cut(s) 635, 847, 1007, 1064
HpaII CCGG 2 cut(s) 532, 1195
HphI GGTGA 6 cut(s) 146, 607, 704, 730, 1066, 1200
Hpy166II GTNNAC 2 cut(s) 150, 841
Hpy188I TCNGA 4 cut(s) 126, 661, 831, 1089
Hpy188III TCNNGA 6 cut(s) 209, 493, 532, 605, 613, 938
Hpy8I GTNNAC 2 cut(s) 150, 841
HpyAV CCTTC 4 cut(s) 221, 532, 901, 935
HpyCH4III ACNGT 3 cut(s) 384, 935, 1183
HpyCH4IV ACGT 2 cut(s) 617, 705
HpyF10VI GCNNNNNNNGC 7 cut(s) 84, 551, 971, 983, 1089, 1145, 1169
HpyF3I CTNAG 2 cut(s) 33, 1016
HpySE526I ACGT 2 cut(s) 617, 705
Hsp92I GRCGYC 1 cut(s) 617
Hsp92II CATG 2 cut(s) 463, 1097
HspAI GCGC 4 cut(s) 18, 439, 907, 1108
Kpn2I TCCGGA 1 cut(s) 531
Kzo9I GATC 4 cut(s) 24, 138, 525, 912
LmnI GCTCC 5 cut(s) 15, 162, 862, 962, 1051
Lsp1109I GCAGC 7 cut(s) 99, 268, 448, 483, 541, 727, 986
LweI GCATC 3 cut(s) 983, 1095, 1157
MaeI CTAG 4 cut(s) 714, 755, 938, 1140
MaeII ACGT 2 cut(s) 617, 705
MaeIII GTNAC 3 cut(s) 344, 692, 1072
MalI GATC 4 cut(s) 26, 140, 527, 914
MboI GATC 4 cut(s) 24, 138, 525, 912
MboII GAAGA 2 cut(s) 328, 440
MflI RGATCY 3 cut(s) 138, 525, 912
MhlI GDGCHC 2 cut(s) 41, 867
MlsI TGGCCA 2 cut(s) 191, 674
MluCI AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
MluNI TGGCCA 2 cut(s) 191, 674
MmeI TCCRAC 3 cut(s) 140, 792, 809
Mox20I TGGCCA 2 cut(s) 191, 674
MroI TCCGGA 1 cut(s) 531
MscI TGGCCA 2 cut(s) 191, 674
MseI TTAA 4 cut(s) 44, 249, 324, 1222
MslI CAYNNNNRTG 1 cut(s) 991
Msp20I TGGCCA 2 cut(s) 191, 674
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 2 cut(s) 532, 1195
MspR9I CCNGG 6 cut(s) 196, 291, 341, 476, 896, 1195
MvaI CCWGG 5 cut(s) 196, 291, 341, 476, 896
MwoI GCNNNNNNNGC 7 cut(s) 84, 551, 971, 983, 1089, 1145, 1169
NciI CCSGG 1 cut(s) 1195
NdeI CATATG 1 cut(s) 730
NdeII GATC 4 cut(s) 24, 138, 525, 912
NlaIII CATG 2 cut(s) 463, 1097
NlaIV GGNNCC 1 cut(s) 527
NmuCI GTSAC 3 cut(s) 344, 692, 1072
NsbI TGCGCA 1 cut(s) 1109
NspV TTCGAA 1 cut(s) 638
PfeI GAWTC 4 cut(s) 635, 847, 1007, 1064
PkrI GCNGC 8 cut(s) 89, 233, 283, 438, 473, 556, 742, 976
PshAI GACNNNNGTC 1 cut(s) 933
PsiI TTATAA 1 cut(s) 969
Psp6I CCWGG 5 cut(s) 194, 289, 339, 474, 894
PspGI CCWGG 5 cut(s) 194, 289, 339, 474, 894
PspN4I GGNNCC 1 cut(s) 527
PspPI GGNCC 1 cut(s) 683
PstI CTGCAG 1 cut(s) 1062
PsuI RGATCY 3 cut(s) 138, 525, 912
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
RseI CAYNNNNRTG 1 cut(s) 991
SaqAI TTAA 4 cut(s) 44, 249, 324, 1222
SatI GCNGC 8 cut(s) 88, 232, 282, 437, 472, 555, 741, 975
Sau3AI GATC 4 cut(s) 24, 138, 525, 912
Sau96I GGNCC 1 cut(s) 683
ScrFI CCNGG 6 cut(s) 196, 291, 341, 476, 896, 1195
SduI GDGCHC 2 cut(s) 41, 867
SfaNI GCATC 3 cut(s) 983, 1095, 1157
SfcI CTRYAG 3 cut(s) 790, 1058, 1152
SfuI TTCGAA 1 cut(s) 638
SmiMI CAYNNNNRTG 1 cut(s) 991
Sse9I AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
SsiI CCGC 2 cut(s) 231, 1144
SspMI CTAG 4 cut(s) 714, 755, 938, 1140
StyD4I CCNGG 6 cut(s) 194, 289, 339, 474, 894, 1193
StyI CCWWGG 1 cut(s) 675
TaaI ACNGT 3 cut(s) 384, 935, 1183
TaiI ACGT 2 cut(s) 620, 708
TaqI TCGA 3 cut(s) 604, 638, 1001
TasI AATT 7 cut(s) 154, 185, 199, 268, 370, 411, 455
TatI WGTACW 1 cut(s) 80
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 4 cut(s) 635, 847, 1007, 1064
Tru1I TTAA 4 cut(s) 44, 249, 324, 1222
Tru9I TTAA 4 cut(s) 44, 249, 324, 1222
TscAI CASTG 1 cut(s) 1053
TseFI GTSAC 3 cut(s) 344, 692, 1072
TseI GCWGC 7 cut(s) 87, 281, 436, 471, 554, 740, 974
Tsp45I GTSAC 3 cut(s) 344, 692, 1072
TspDTI ATGAA 8 cut(s) 261, 279, 448, 468, 492, 551, 1047, 1173
TspGWI ACGGA 2 cut(s) 143, 194
TspRI CASTG 1 cut(s) 1053
XapI RAATTY 3 cut(s) 199, 268, 455
XbaI TCTAGA 1 cut(s) 937
XspI CTAG 4 cut(s) 714, 755, 938, 1140
ZraI GACGTC 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.