pycom11g08870
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
6997767 .. 6999708
1942 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g08870.1

Sequence Viewer

Length: 1266 bp
ATGGGGGTCTGCCTGAGCGCCCGAATCAAAGTTGAGAGCTCTGTTAATACTGGTTCAAAATTTGCTAGCAATGATGGGGACCTCAGCAGCACAAGCAGTAAGGTCTCATCATTTTCGGCACCTCCAACTCCTCGGAGTGAGGGCGAGATCTTGAAGTCTCCCAATCTGAAGAGCTTTAGTTACAATGACCTCAAATTGGCCACCAGGAATTTCCGTCCTGATAGTGTGTTGGGAGAAGGTGGATTTGGTTCAGTTTTTAAGGGGTGGATTGATGAGAATTCGTTCACTGCTGCAAAGCCCGGGAGTGGCATAGTTTTGGCTGTGAAACGGCTTAACCAAGAAAGTTTTCAGGGTCACCGAGAGTGGTTGGCAGAAGTGAATTATCTAGGACAGCTCTATCATCCGAATCTCGTGAAACTAATCGGCTACTGCTTGGAGGATGAACACCGACTTCTGGTGTACGAGTTCATGCCTCGAGGCAGCTTGGAAAACCATTTGTTCAGGAGAGGCTCTTATTTCCAACCTCTTTCTTGGAACCTCCGCATGAAGGTTGCCCTTGGTGCTGCAAAGGGGCTTGCTTTTCTTCACAGTGCTGAAACAAAAGTGATATACCGAGATTTCAAGACGTCAAACATCCTGCTTGATTCGAACTACAATGCAAAACTTTCCGACTTTGGTTTGGCCAAGGACGGGCCAACGGGTGATAAAAGCCATGTCTCTACGAGGGTCATGGGCACCTACGGATACGCTGCTCCAGAATATCTAGCCACAGGTCATCTAACTGCCAAGAGCGACATATATAGTTTCGGAGTCGTTTTATTGGAGATGTTATCTGGCCGGAGAGCAGTTGACAAGAATCGGCCATCCGGAGAGCACAATCTGGTGGAGTGGGCTAAACCCTTCTTGGCAAACAAGCGTAAGATCTTTCGCGTCATTGACAACCGTCTGGAAGGTCAGTATTCAATGGACGGAGCTCACAAGGCGGCAACCCTTGCAGCACGATGCATATCCACAGAATCCAAGCTCAGGCCAAACATGGACGAGGTCGTAACTGCACTCGAACAACTACAAGATTCTAATGCCACCGGAGGCACTCAGAGTAATGGTCAAAGGATGCGCAGACGAAGTGCAGACGAAGCTAGCAAAACCAAGCGCGCAGCAGCAGCAGCAGCACCAGCAGATGATGCCTTAAGGGCAGCTAACAAGGCAACGAATACTGTCGCCTATCCTCGGCCCTCTGCTTCCCCACTTTACGTTTCAGAATAG

Protein Analysis

422

Amino Acids

46.12

Weight (kDa)

9.42

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 74 - 350 5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 75 - 353 5.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 629
AbsI CCTCGAGG 1 cut(s) 474
Acc16I TGCGCA 1 cut(s) 1118
AccB1I GGYRCC 2 cut(s) 118, 734
AccII CGCG 2 cut(s) 930, 1155
AccIII TCCGGA 1 cut(s) 866
AciI CCGC 2 cut(s) 541, 983
AcoI YGGCCR 4 cut(s) 198, 681, 835, 860
AcsI RAATTY 3 cut(s) 59, 208, 277
AcuI CTGAAG 1 cut(s) 188
AcyI GRCGYC 1 cut(s) 626
AfaI GTAC 1 cut(s) 461
AfiI CCNNNNNNNGG 7 cut(s) 196, 305, 454, 547, 690, 1026, 1230
AflII CTTAAG 1 cut(s) 1189
AgsI TTSAA 4 cut(s) 57, 154, 622, 963
AjnI CCWGG 1 cut(s) 203
AjuI GAANNNNNNNTTGG 4 cut(s) 228, 260, 330, 362
AluBI AGCT 8 cut(s) 39, 174, 394, 483, 974, 1024, 1139, 1199
AluI AGCT 8 cut(s) 39, 174, 394, 483, 974, 1024, 1139, 1199
Alw21I GWGCWC 3 cut(s) 41, 876, 976
Alw26I GTCTC 3 cut(s) 109, 162, 721
Ama87I CYCGRG 2 cut(s) 299, 474
Aor13HI TCCGGA 1 cut(s) 866
AoxI GGCC 7 cut(s) 198, 681, 692, 835, 860, 1028, 1232
ApoI RAATTY 3 cut(s) 59, 208, 277
Asp700I GAANNNNTTC 2 cut(s) 281, 345
AspLEI GCGC 4 cut(s) 20, 1119, 1155, 1157
AspS9I GGNCC 3 cut(s) 79, 692, 1233
AsuC2I CCSGG 2 cut(s) 300, 301
AsuHPI GGTGA 2 cut(s) 347, 713
AsuII TTCGAA 1 cut(s) 647
AsuNHI GCTAGC 2 cut(s) 65, 1139
AvaI CYCGRG 2 cut(s) 299, 474
AvaII GGWCC 1 cut(s) 79
BaeGI GKGCMC 1 cut(s) 737
BalI TGGCCA 2 cut(s) 200, 683
BanI GGYRCC 2 cut(s) 118, 734
BanII GRGCYC 2 cut(s) 41, 976
BauI CACGAG 1 cut(s) 410
Bbv12I GWGCWC 3 cut(s) 41, 876, 976
BbvCI CCTCAGC 1 cut(s) 83
BccI CCATC 2 cut(s) 68, 871
BceAI ACGGC 1 cut(s) 344
BciT130I CCWGG 1 cut(s) 205
BciVI GTATCC 1 cut(s) 737
BcnI CCSGG 2 cut(s) 300, 301
BcoDI GTCTC 3 cut(s) 109, 162, 721
BfaI CTAG 4 cut(s) 66, 386, 764, 1140
BfoI RGCGCY 1 cut(s) 21
BfrI CTTAAG 1 cut(s) 1189
BfuI GTATCC 1 cut(s) 737
BglI GCCNNNNNGGC 1 cut(s) 1193
BglII AGATCT 2 cut(s) 147, 921
Bme1390I CCNGG 3 cut(s) 205, 300, 301
Bme18I GGWCC 1 cut(s) 79
BmeT110I CYCGRG 2 cut(s) 299, 474
BmgT120I GGNCC 3 cut(s) 79, 692, 1233
BmiI GGNNCC 4 cut(s) 80, 120, 536, 736
BmrFI CCNGG 3 cut(s) 205, 300, 301
BmsI GCATC 3 cut(s) 992, 1104, 1174
BmtI GCTAGC 2 cut(s) 69, 1143
BoxI GACNNNNGTC 1 cut(s) 942
BpmI CTGGAG 1 cut(s) 738
Bpu10I CCTNAGC 3 cut(s) 14, 83, 1025
Bpu14I TTCGAA 1 cut(s) 647
BpuMI CCSGG 2 cut(s) 300, 301
BsaBI GATNNNNATC 1 cut(s) 1006
BsaHI GRCGYC 1 cut(s) 626
BsaI GGTCTC 1 cut(s) 109
BsaJI CCNNGG 5 cut(s) 131, 299, 556, 684, 1229
BsaWI WCCGGW 2 cut(s) 866, 1085
Bsc4I CCNNNNNNNGG 7 cut(s) 196, 305, 454, 547, 690, 1026, 1230
Bse1I ACTGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 76
Bse8I GATNNNNATC 1 cut(s) 1006
BseAI TCCGGA 1 cut(s) 866
BseBI CCWGG 1 cut(s) 205
BseDI CCNNGG 5 cut(s) 131, 299, 556, 684, 1229
BseGI GGATG 5 cut(s) 400, 445, 633, 863, 1119
BseJI GATNNNNATC 1 cut(s) 1006
BseLI CCNNNNNNNGG 7 cut(s) 196, 305, 454, 547, 690, 1026, 1230
BseMI GCAATG 1 cut(s) 76
BseMII CTCAG 4 cut(s) 5, 97, 1039, 1109
BseNI ACTGG 1 cut(s) 55
BsePI GCGCGC 1 cut(s) 1153
BseRI GAGGAG 1 cut(s) 120
BseSI GKGCMC 1 cut(s) 737
BsgI GTGCAG 2 cut(s) 1038, 1149
Bsh1236I CGCG 2 cut(s) 930, 1155
BshFI GGCC 7 cut(s) 200, 683, 694, 837, 862, 1030, 1234
BshNI GGYRCC 2 cut(s) 118, 734
BsiHKAI GWGCWC 3 cut(s) 41, 876, 976
BsiHKCI CYCGRG 2 cut(s) 299, 474
BsiSI CCGG 4 cut(s) 300, 838, 867, 1086
BslFI GGGAC 1 cut(s) 92
BslI CCNNNNNNNGG 7 cut(s) 196, 305, 454, 547, 690, 1026, 1230
BsmAI GTCTC 3 cut(s) 109, 162, 721
BsmFI GGGAC 1 cut(s) 92
BsnI GGCC 7 cut(s) 200, 683, 694, 837, 862, 1030, 1234
Bso31I GGTCTC 1 cut(s) 109
BsoBI CYCGRG 2 cut(s) 299, 474
Bsp119I TTCGAA 1 cut(s) 647
Bsp1286I GDGCHC 4 cut(s) 41, 737, 876, 976
Bsp13I TCCGGA 1 cut(s) 866
Bsp143I GATC 2 cut(s) 147, 921
BspACI CCGC 2 cut(s) 541, 983
BspANI GGCC 7 cut(s) 200, 683, 694, 837, 862, 1030, 1234
BspCNI CTCAG 4 cut(s) 6, 96, 1038, 1108
BspEI TCCGGA 1 cut(s) 866
BspFNI CGCG 2 cut(s) 930, 1155
BspLI GGNNCC 4 cut(s) 80, 120, 536, 736
BspOI GCTAGC 2 cut(s) 69, 1143
BspQI GCTCTTC 1 cut(s) 164
BspT104I TTCGAA 1 cut(s) 647
BspT107I GGYRCC 2 cut(s) 118, 734
BspTI CTTAAG 1 cut(s) 1189
BspTNI GGTCTC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 76
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 5 cut(s) 131, 299, 556, 684, 1229
BssHII GCGCGC 1 cut(s) 1153
BssMI GATC 2 cut(s) 147, 921
BssNI GRCGYC 1 cut(s) 626
BssSI CACGAG 1 cut(s) 410
BssT1I CCWWGG 2 cut(s) 556, 684
Bst2BI CACGAG 1 cut(s) 410
Bst2UI CCWGG 1 cut(s) 205
Bst4CI ACNGT 3 cut(s) 590, 944, 1219
Bst6I CTCTTC 1 cut(s) 164
BstACI GRCGYC 1 cut(s) 626
BstAFI CTTAAG 1 cut(s) 1189
BstAPI GCANNNNNTGC 2 cut(s) 992, 1184
BstBI TTCGAA 1 cut(s) 647
BstC8I GCNNGC 4 cut(s) 67, 576, 1141, 1155
BstDEI CTNAG 4 cut(s) 14, 83, 1025, 1095
BstEII GGTNACC 1 cut(s) 353
BstF5I GGATG 5 cut(s) 400, 445, 633, 863, 1119
BstFNI CGCG 2 cut(s) 930, 1155
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 4 cut(s) 20, 1119, 1155, 1157
BstKTI GATC 2 cut(s) 150, 924
BstMAI GTCTC 3 cut(s) 109, 162, 721
BstMBI GATC 2 cut(s) 147, 921
BstNI CCWGG 1 cut(s) 205
BstPAI GACNNNNGTC 1 cut(s) 942
BstPI GGTNACC 1 cut(s) 353
BstSCI CCNGG 3 cut(s) 203, 298, 299
BstSLI GKGCMC 1 cut(s) 737
BstUI CGCG 2 cut(s) 930, 1155
BstX2I RGATCY 2 cut(s) 147, 921
BstYI RGATCY 2 cut(s) 147, 921
BsuI GTATCC 1 cut(s) 737
BsuRI GGCC 7 cut(s) 200, 683, 694, 837, 862, 1030, 1234
BtsCI GGATG 5 cut(s) 400, 445, 633, 863, 1119
BtsI GCAGTG 1 cut(s) 285
BtsIMutI CAGTG 2 cut(s) 285, 595
Cac8I GCNNGC 4 cut(s) 67, 576, 1141, 1155
CfoI GCGC 4 cut(s) 20, 1119, 1155, 1157
Cfr13I GGNCC 3 cut(s) 79, 692, 1233
Cfr9I CCCGGG 1 cut(s) 299
CseI GACGC 1 cut(s) 919
Csp6I GTAC 1 cut(s) 460
CviAII CATG 5 cut(s) 469, 544, 713, 730, 1036
CviQI GTAC 1 cut(s) 460
DdeI CTNAG 4 cut(s) 14, 83, 1025, 1095
DpnI GATC 2 cut(s) 149, 923
DpnII GATC 2 cut(s) 147, 921
EaeI YGGCCR 4 cut(s) 198, 681, 835, 860
Eam1104I CTCTTC 1 cut(s) 164
EarI CTCTTC 1 cut(s) 164
Ecl136II GAGCTC 2 cut(s) 39, 974
Eco130I CCWWGG 2 cut(s) 556, 684
Eco24I GRGCYC 2 cut(s) 41, 976
Eco31I GGTCTC 1 cut(s) 109
Eco47I GGWCC 1 cut(s) 79
Eco53kI GAGCTC 2 cut(s) 39, 974
Eco57I CTGAAG 1 cut(s) 188
Eco88I CYCGRG 2 cut(s) 299, 474
Eco91I GGTNACC 1 cut(s) 353
EcoICRI GAGCTC 2 cut(s) 39, 974
EcoO109I RGGNCCY 1 cut(s) 79
EcoO65I GGTNACC 1 cut(s) 353
EcoRI GAATTC 1 cut(s) 277
EcoRII CCWGG 1 cut(s) 203
EcoT14I CCWWGG 2 cut(s) 556, 684
EcoT22I ATGCAT 1 cut(s) 1007
EcoT38I GRGCYC 2 cut(s) 41, 976
ErhI CCWWGG 2 cut(s) 556, 684
FaeI CATG 5 cut(s) 472, 547, 716, 733, 1039
FaqI GGGAC 1 cut(s) 92
FatI CATG 5 cut(s) 468, 543, 712, 729, 1035
FokI GGATG 5 cut(s) 387, 452, 620, 850, 1126
FriOI GRGCYC 2 cut(s) 41, 976
FspBI CTAG 4 cut(s) 66, 386, 764, 1140
FspI TGCGCA 1 cut(s) 1118
GlaI GCGC 4 cut(s) 19, 1118, 1154, 1156
GsuI CTGGAG 1 cut(s) 738
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 7 cut(s) 200, 683, 694, 837, 862, 1030, 1234
HapII CCGG 4 cut(s) 300, 838, 867, 1086
HgaI GACGC 1 cut(s) 919
HhaI GCGC 4 cut(s) 20, 1119, 1155, 1157
Hin1I GRCGYC 1 cut(s) 626
Hin1II CATG 5 cut(s) 472, 547, 716, 733, 1039
Hin6I GCGC 4 cut(s) 18, 1117, 1153, 1155
HinP1I GCGC 4 cut(s) 18, 1117, 1153, 1155
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HinfI GANTC 7 cut(s) 24, 406, 644, 810, 856, 1016, 1073
HpaII CCGG 4 cut(s) 300, 838, 867, 1086
HphI GGTGA 2 cut(s) 347, 713
Hpy166II GTNNAC 3 cut(s) 285, 460, 850
Hpy188I TCNGA 7 cut(s) 135, 168, 405, 670, 809, 1098, 1261
Hpy188III TCNNGA 8 cut(s) 151, 218, 412, 502, 622, 755, 867, 947
Hpy8I GTNNAC 3 cut(s) 285, 460, 850
HpyAV CCTTC 4 cut(s) 230, 541, 910, 944
HpyCH4III ACNGT 3 cut(s) 590, 944, 1219
HpyCH4IV ACGT 2 cut(s) 626, 1254
HpyCH4V TGCA 7 cut(s) 293, 566, 659, 995, 1005, 1055, 1130
HpyF3I CTNAG 4 cut(s) 14, 83, 1025, 1095
HpySE526I ACGT 2 cut(s) 626, 1254
Hsp92I GRCGYC 1 cut(s) 626
Hsp92II CATG 5 cut(s) 472, 547, 716, 733, 1039
HspAI GCGC 4 cut(s) 18, 1117, 1153, 1155
Kpn2I TCCGGA 1 cut(s) 866
Kzo9I GATC 2 cut(s) 147, 921
LguI GCTCTTC 1 cut(s) 164
LmnI GCTCC 2 cut(s) 757, 971
LweI GCATC 3 cut(s) 992, 1104, 1174
MaeI CTAG 4 cut(s) 66, 386, 764, 1140
MaeII ACGT 2 cut(s) 626, 1254
MaeIII GTNAC 3 cut(s) 179, 353, 1048
MalI GATC 2 cut(s) 149, 923
MboI GATC 2 cut(s) 147, 921
MboII GAAGA 2 cut(s) 181, 575
MflI RGATCY 2 cut(s) 147, 921
MhlI GDGCHC 4 cut(s) 41, 737, 876, 976
MlsI TGGCCA 2 cut(s) 200, 683
MluCI AATT 5 cut(s) 59, 194, 208, 277, 379
MluNI TGGCCA 2 cut(s) 200, 683
MlyI GAGTC 1 cut(s) 819
MmeI TCCRAC 3 cut(s) 149, 544, 693
Mox20I TGGCCA 2 cut(s) 200, 683
Mph1103I ATGCAT 1 cut(s) 1007
MroI TCCGGA 1 cut(s) 866
MroXI GAANNNNTTC 2 cut(s) 281, 345
MscI TGGCCA 2 cut(s) 200, 683
MseI TTAA 4 cut(s) 45, 258, 333, 1190
Msp20I TGGCCA 2 cut(s) 200, 683
MspCI CTTAAG 1 cut(s) 1189
MspI CCGG 4 cut(s) 300, 838, 867, 1086
MspR9I CCNGG 3 cut(s) 205, 300, 301
MvaI CCWGG 1 cut(s) 205
MvnI CGCG 2 cut(s) 930, 1155
NciI CCSGG 2 cut(s) 300, 301
NdeII GATC 2 cut(s) 147, 921
NheI GCTAGC 2 cut(s) 65, 1139
NlaIII CATG 5 cut(s) 472, 547, 716, 733, 1039
NlaIV GGNNCC 4 cut(s) 80, 120, 536, 736
NmeAIII GCCGAG 1 cut(s) 1210
NmuCI GTSAC 1 cut(s) 353
NsbI TGCGCA 1 cut(s) 1118
NsiI ATGCAT 1 cut(s) 1007
NspV TTCGAA 1 cut(s) 647
PaeR7I CTCGAG 1 cut(s) 474
PauI GCGCGC 1 cut(s) 1153
PciSI GCTCTTC 1 cut(s) 164
PdmI GAANNNNTTC 2 cut(s) 281, 345
PfeI GAWTC 6 cut(s) 24, 406, 644, 856, 1016, 1073
PflFI GACNNNGTC 1 cut(s) 1043
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
PpuMI RGGWCCY 1 cut(s) 79
PshAI GACNNNNGTC 1 cut(s) 942
Psp124BI GAGCTC 2 cut(s) 41, 976
Psp5II RGGWCCY 1 cut(s) 79
Psp6I CCWGG 1 cut(s) 203
PspEI GGTNACC 1 cut(s) 353
PspGI CCWGG 1 cut(s) 203
PspN4I GGNNCC 4 cut(s) 80, 120, 536, 736
PspPI GGNCC 3 cut(s) 79, 692, 1233
PspPPI RGGWCCY 1 cut(s) 79
PspXI VCTCGAGB 1 cut(s) 474
PsuI RGATCY 2 cut(s) 147, 921
PsyI GACNNNGTC 1 cut(s) 1043
PteI GCGCGC 1 cut(s) 1153
RsaI GTAC 1 cut(s) 461
RsaNI GTAC 1 cut(s) 460
SacI GAGCTC 2 cut(s) 41, 976
SapI GCTCTTC 1 cut(s) 164
SaqAI TTAA 4 cut(s) 45, 258, 333, 1190
Sau3AI GATC 2 cut(s) 147, 921
Sau96I GGNCC 3 cut(s) 79, 692, 1233
SchI GAGTC 1 cut(s) 819
ScrFI CCNGG 3 cut(s) 205, 300, 301
SduI GDGCHC 4 cut(s) 41, 737, 876, 976
SfaNI GCATC 3 cut(s) 992, 1104, 1174
Sfr274I CTCGAG 1 cut(s) 474
SfuI TTCGAA 1 cut(s) 647
SinI GGWCC 1 cut(s) 79
SlaI CTCGAG 1 cut(s) 474
SmaI CCCGGG 1 cut(s) 301
SmlI CTYRAG 2 cut(s) 474, 1189
SmoI CTYRAG 2 cut(s) 474, 1189
Sse9I AATT 5 cut(s) 59, 194, 208, 277, 379
SsiI CCGC 2 cut(s) 541, 983
SspMI CTAG 4 cut(s) 66, 386, 764, 1140
SstI GAGCTC 2 cut(s) 41, 976
StyD4I CCNGG 3 cut(s) 203, 298, 299
StyI CCWWGG 2 cut(s) 556, 684
TaaI ACNGT 3 cut(s) 590, 944, 1219
TaiI ACGT 2 cut(s) 629, 1257
TaqI TCGA 3 cut(s) 475, 647, 1059
TasI AATT 5 cut(s) 59, 194, 208, 277, 379
TauI GCSGC 1 cut(s) 986
TfiI GAWTC 6 cut(s) 24, 406, 644, 856, 1016, 1073
Tru1I TTAA 4 cut(s) 45, 258, 333, 1190
Tru9I TTAA 4 cut(s) 45, 258, 333, 1190
TscAI CASTG 2 cut(s) 292, 595
TseFI GTSAC 1 cut(s) 353
Tsp45I GTSAC 1 cut(s) 353
TspDTI ATGAA 3 cut(s) 456, 457, 560
TspGWI ACGGA 3 cut(s) 203, 756, 984
TspMI CCCGGG 1 cut(s) 299
TspRI CASTG 2 cut(s) 292, 595
Tth111I GACNNNGTC 1 cut(s) 1043
Vha464I CTTAAG 1 cut(s) 1189
VpaK11BI GGWCC 1 cut(s) 79
XapI RAATTY 3 cut(s) 59, 208, 277
XhoI CTCGAG 1 cut(s) 474
XmaI CCCGGG 1 cut(s) 299
XmnI GAANNNNTTC 2 cut(s) 281, 345
XspI CTAG 4 cut(s) 66, 386, 764, 1140
ZraI GACGTC 1 cut(s) 627
Zsp2I ATGCAT 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.