Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008925

Physical Location & Seq

Genomic Coordinates Reverse (-)

6165384 .. 6169736

Gene Structure 4353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G090100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGAGCTGCTTTTGCTGCACTGAGAAATCAACCGAAGAATCAAAGAAGAAAAATACCAACATCAACGGCAACAAACCCAATCATCAAGAAGTGAATTCAAATGGGAATGTTAAAAAGGAATTGGGTGTAAAAAAGGAGGAGGCCTCTAAGGATGACCAGTTATCGTTGGATGCAAAGGAGTGGAATATAAAGGAGGAGGTTTCTAAGGATGGAAAAACCAACGGCAAGCGAGCACAGACATTTACATTTGATGAACTTGCAGCAGCAACTGACGATTTCAGGTCTGATTGCTTCCTGGGTGAAGGAGGATTCGGAAAAGTTTACAAGGGTCACTTAGAGAAAATTAACCAGGTTGTTGCTATCAAGCAGCTTGATCGTAATGGGTGCCAAGGGATTAGAGAGTTTGTTGTCGAAGTATTGACGCTAAGTCTGGCTGACCACCCTAATCTCGTCAAATTGATTGGGTTTTGTGCCGAGGGAGATCAGAGGCTATTGGTTTATGAATATATGCCATTAGGATCCTTGGAAAACCATTTGCATGATCTTTCACCCAGCAGGAAAGCGCTCGATTGGAATACAAGAATGAAGATAGCAGCTGGTGCGGCAAGGGGTTTAGAGTATCTGCATGAGAAAATGCAGCCCCCTGTTATATATCGTGATCTGAAATGCTCAAACATTTTGCTTGGTGAGGGGTATCATCCAAAGCTATCTGATTTTGGCTTGGCCAAAGTAGGTCCCAGTGGAGATAAGACTCATGTTTCTACTAGGGTTATGGGCACGTATGGGTATTGTGCACCTGATTATGCAATGACAGGTCAGCTGACTTTTAAGTCGGATGTTTATAGCTTTGGGGTTGTTCTTTTGGAGCTTATCACAGGAAGGAAAGCTATTGATAATACAAAACCTGTCAAAGAGCAGAACCTGGTAGCATGGGCAAGACCACTGTTTAGAGACCGGAAGAGATTTTCACAAATGGTGGATCCGTTGCTCCAAGGTCAGTATCCTGTCAGGGGACTATACCAAGCCCTTGCTATTGCTGCAATGTGCGTCCAGGAGCAGCCCAATATGCGGCCTGTCATAACAGATATAGTTACAGCGTTGAATTACCTTGCTTCCCAGAAATATGACCCCCAAATACATCCAGTTCAAACCTCGAGAAGGGGTTCATCTTCTCCTAGAGGGAGGAGAGATGATGATATAAGGCAGATTGGAGGTAACGGACCGGAGAGAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

412

Amino Acids

45.93

Weight (kDa)

8.56

Isoelectric Point (pI)

33.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07870 AT1G07870 AT2G28590 AT2G28590
fragaria_vesca	FvH4_3g34150 FvH4_3g34150 FvH4_3g34150 FvH4_3g34150
malus_domestica	MD03G1107300.v1.1 MD11G1120000.v1.1
prunus_persica	Prupe.6G090100_v2.0.a1 Prupe.6G090100_v2.0.a1
pyrus_communis	pycom03g08680 pycom11g10140
rosa_chinensis	RchiOBHm_Chr5g0061791
rosa_laevigata	RLG00000035506
rosa_multiflora	Rmu_ssc0000275.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018940
rosa_rugosa	Rorug05G0343900 Rorug05G0344000
rosa_samantha	Rh5AG404800
rosa_wichuraiana	Rw5G038020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	829
AccB1I	GGYRCC	1 cut(s)	384
AciI	CCGC	2 cut(s)	602, 1069
AclWI	GGATC	4 cut(s)	513, 526, 974, 987
AcoI	YGGCCR	1 cut(s)	723
AcsI	RAATTY	1 cut(s)	94
AfeI	AGCGCT	1 cut(s)	564
AfiI	CCNNNNNNNGG	3 cut(s)	1010, 1068, 1158
AgsI	TTSAA	3 cut(s)	99, 1102, 1148
AhdI	GACNNNNNGTC	1 cut(s)	426
AjnI	CCWGG	4 cut(s)	294, 348, 921, 1050
AluBI	AGCT	8 cut(s)	6, 370, 596, 706, 820, 846, 868, 887
AluI	AGCT	8 cut(s)	6, 370, 596, 706, 820, 846, 868, 887
Alw21I	GWGCWC	2 cut(s)	235, 796
Alw26I	GTCTC	2 cut(s)	945, 1224
Alw44I	GTGCAC	1 cut(s)	792
AlwI	GGATC	4 cut(s)	513, 526, 974, 987
AlwNI	CAGNNNCTG	2 cut(s)	269, 922
Ama87I	CYCGRG	1 cut(s)	1153
Aor51HI	AGCGCT	1 cut(s)	564
AoxI	GGCC	3 cut(s)	141, 723, 1070
ApaLI	GTGCAC	1 cut(s)	792
ApeKI	GCWGC	9 cut(s)	6, 15, 260, 263, 367, 593, 637, 1037, 1057
ApoI	RAATTY	1 cut(s)	94
Asp700I	GAANNNNTTC	1 cut(s)	1162
AspLEI	GCGC	1 cut(s)	565
AspS9I	GGNCC	2 cut(s)	734, 1220
AsuHPI	GGTGA	3 cut(s)	311, 540, 698
AvaI	CYCGRG	1 cut(s)	1153
AvaII	GGWCC	2 cut(s)	734, 1220
BaeGI	GKGCMC	2 cut(s)	779, 796
BalI	TGGCCA	1 cut(s)	725
BamHI	GGATCC	2 cut(s)	518, 979
BanI	GGYRCC	1 cut(s)	384
Bbv12I	GWGCWC	2 cut(s)	235, 796
BbvI	GCAGC	8 cut(s)	2, 272, 275, 379, 605, 649, 1024, 1069
BccI	CCATC	1 cut(s)	203
BceAI	ACGGC	2 cut(s)	82, 238
BcgI	CGANNNNNNTGC	2 cut(s)	356, 390
BciT130I	CCWGG	4 cut(s)	296, 350, 923, 1052
BciVI	GTATCC	1 cut(s)	1011
BcoDI	GTCTC	2 cut(s)	945, 1224
BfaI	CTAG	2 cut(s)	765, 1176
BfoI	RGCGCY	1 cut(s)	566
BfuI	GTATCC	1 cut(s)	1011
Bme1390I	CCNGG	4 cut(s)	296, 350, 923, 1052
Bme18I	GGWCC	2 cut(s)	734, 1220
BmeRI	GACNNNNNGTC	1 cut(s)	426
BmeT110I	CYCGRG	1 cut(s)	1153
BmgT120I	GGNCC	2 cut(s)	734, 1220
BmiI	GGNNCC	4 cut(s)	386, 520, 736, 981
BmrFI	CCNGG	4 cut(s)	296, 350, 923, 1052
BmrI	ACTGGG	1 cut(s)	732
BmsI	GCATC	1 cut(s)	160
BmuI	ACTGGG	1 cut(s)	732
BplI	GAGNNNNNCTC	2 cut(s)	128, 160
BsaAI	YACGTR	1 cut(s)	780
BsaI	GGTCTC	1 cut(s)	945
BsaJI	CCNNGG	5 cut(s)	295, 388, 474, 522, 991
BsaWI	WCCGGW	2 cut(s)	954, 1222
Bsc4I	CCNNNNNNNGG	3 cut(s)	1010, 1068, 1158
Bse1I	ACTGG	3 cut(s)	157, 738, 1142
Bse3DI	GCAATG	2 cut(s)	813, 1047
BseBI	CCWGG	4 cut(s)	296, 350, 923, 1052
BseDI	CCNNGG	5 cut(s)	295, 388, 474, 522, 991
BseGI	GGATG	6 cut(s)	157, 175, 214, 697, 841, 1138
BseLI	CCNNNNNNNGG	3 cut(s)	1010, 1068, 1158
BseMI	GCAATG	2 cut(s)	813, 1047
BseMII	CTCAG	1 cut(s)	12
BseNI	ACTGG	3 cut(s)	157, 738, 1142
BseRI	GAGGAG	3 cut(s)	152, 209, 1198
BseSI	GKGCMC	2 cut(s)	779, 796
BseXI	GCAGC	8 cut(s)	2, 272, 275, 379, 605, 649, 1024, 1069
BseYI	CCCAGC	1 cut(s)	551
BshFI	GGCC	3 cut(s)	143, 725, 1072
BshNI	GGYRCC	1 cut(s)	384
BsiHKAI	GWGCWC	2 cut(s)	235, 796
BsiHKCI	CYCGRG	1 cut(s)	1153
BsiSI	CCGG	2 cut(s)	955, 1223
BslFI	GGGAC	2 cut(s)	720, 1026
BslI	CCNNNNNNNGG	3 cut(s)	1010, 1068, 1158
BsmAI	GTCTC	2 cut(s)	945, 1224
BsmFI	GGGAC	2 cut(s)	720, 1026
BsnI	GGCC	3 cut(s)	143, 725, 1072
Bso31I	GGTCTC	1 cut(s)	945
BsoBI	CYCGRG	1 cut(s)	1153
Bsp1286I	GDGCHC	3 cut(s)	235, 779, 796
Bsp143I	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
BspACI	CCGC	2 cut(s)	602, 1069
BspANI	GGCC	3 cut(s)	143, 725, 1072
BspCNI	CTCAG	1 cut(s)	13
BspLI	GGNNCC	4 cut(s)	386, 520, 736, 981
BspPI	GGATC	4 cut(s)	513, 526, 974, 987
BspT107I	GGYRCC	1 cut(s)	384
BspTNI	GGTCTC	1 cut(s)	945
BsrDI	GCAATG	2 cut(s)	813, 1047
BsrI	ACTGG	3 cut(s)	157, 738, 1142
BssECI	CCNNGG	5 cut(s)	295, 388, 474, 522, 991
BssMI	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
BssT1I	CCWWGG	3 cut(s)	388, 522, 991
Bst2UI	CCWGG	4 cut(s)	296, 350, 923, 1052
Bst4CI	ACNGT	1 cut(s)	945
Bst6I	CTCTTC	1 cut(s)	953
BstAPI	GCANNNNNTGC	1 cut(s)	599
BstBAI	YACGTR	1 cut(s)	780
BstC8I	GCNNGC	2 cut(s)	227, 231
BstDEI	CTNAG	5 cut(s)	21, 147, 204, 334, 425
BstENI	CCTNNNNNAGG	1 cut(s)	1156
BstF5I	GGATG	6 cut(s)	157, 175, 214, 697, 841, 1138
BstH2I	RGCGCY	1 cut(s)	566
BstHHI	GCGC	1 cut(s)	565
BstKTI	GATC	6 cut(s)	376, 484, 521, 544, 661, 982
BstMAI	GTCTC	2 cut(s)	945, 1224
BstMBI	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
BstMWI	GCNNNNNNNGC	6 cut(s)	12, 15, 599, 602, 1037, 1066
BstNI	CCWGG	4 cut(s)	296, 350, 923, 1052
BstSCI	CCNGG	4 cut(s)	294, 348, 921, 1050
BstSLI	GKGCMC	2 cut(s)	779, 796
BstV1I	GCAGC	8 cut(s)	2, 272, 275, 379, 605, 649, 1024, 1069
BstX2I	RGATCY	2 cut(s)	518, 979
BstYI	RGATCY	2 cut(s)	518, 979
BsuI	GTATCC	1 cut(s)	1011
BsuRI	GGCC	3 cut(s)	143, 725, 1072
BtsCI	GGATG	6 cut(s)	157, 175, 214, 697, 841, 1138
BtsIMutI	CAGTG	3 cut(s)	18, 745, 941
Cac8I	GCNNGC	2 cut(s)	227, 231
CaiI	CAGNNNCTG	2 cut(s)	269, 922
CfoI	GCGC	1 cut(s)	565
Cfr13I	GGNCC	2 cut(s)	734, 1220
CpoI	CGGWCCG	1 cut(s)	1220
CseI	GACGC	2 cut(s)	430, 1036
CsiI	ACCWGGT	2 cut(s)	348, 921
CspI	CGGWCCG	1 cut(s)	1220
CviAII	CATG	4 cut(s)	539, 626, 755, 930
DdeI	CTNAG	5 cut(s)	21, 147, 204, 334, 425
DpnI	GATC	6 cut(s)	375, 483, 520, 543, 660, 981
DpnII	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
DrdI	GACNNNNNNGTC	1 cut(s)	829
DriI	GACNNNNNGTC	1 cut(s)	426
DseDI	GACNNNNNNGTC	1 cut(s)	829
EaeI	YGGCCR	1 cut(s)	723
Eam1104I	CTCTTC	1 cut(s)	953
Eam1105I	GACNNNNNGTC	1 cut(s)	426
EarI	CTCTTC	1 cut(s)	953
Eco130I	CCWWGG	3 cut(s)	388, 522, 991
Eco147I	AGGCCT	1 cut(s)	143
Eco31I	GGTCTC	1 cut(s)	945
Eco47I	GGWCC	2 cut(s)	734, 1220
Eco47III	AGCGCT	1 cut(s)	564
Eco88I	CYCGRG	1 cut(s)	1153
EcoNI	CCTNNNNNAGG	1 cut(s)	1156
EcoO109I	RGGNCCY	1 cut(s)	734
EcoRI	GAATTC	1 cut(s)	94
EcoRII	CCWGG	4 cut(s)	294, 348, 921, 1050
EcoT14I	CCWWGG	3 cut(s)	388, 522, 991
ErhI	CCWWGG	3 cut(s)	388, 522, 991
FaeI	CATG	4 cut(s)	542, 629, 758, 933
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	2 cut(s)	720, 1026
FatI	CATG	4 cut(s)	538, 625, 754, 929
FokI	GGATG	6 cut(s)	164, 182, 221, 684, 848, 1125
FspBI	CTAG	2 cut(s)	765, 1176
GlaI	GCGC	1 cut(s)	564
GsaI	CCCAGC	1 cut(s)	555
HaeII	RGCGCY	1 cut(s)	566
HaeIII	GGCC	3 cut(s)	143, 725, 1072
HapII	CCGG	2 cut(s)	955, 1223
HgaI	GACGC	2 cut(s)	430, 1036
HhaI	GCGC	1 cut(s)	565
Hin1II	CATG	4 cut(s)	542, 629, 758, 933
Hin6I	GCGC	1 cut(s)	563
HinP1I	GCGC	1 cut(s)	563
HinfI	GANTC	3 cut(s)	38, 309, 751
HpaII	CCGG	2 cut(s)	955, 1223
HphI	GGTGA	3 cut(s)	311, 540, 698
Hpy166II	GTNNAC	2 cut(s)	322, 794
Hpy188I	TCNGA	6 cut(s)	286, 314, 486, 663, 712, 835
Hpy188III	TCNNGA	3 cut(s)	86, 656, 1155
Hpy8I	GTNNAC	2 cut(s)	322, 794
HpyAV	CCTTC	3 cut(s)	296, 873, 1152
HpyCH4III	ACNGT	1 cut(s)	945
HpyCH4IV	ACGT	1 cut(s)	779
HpyCH4V	TGCA	9 cut(s)	18, 173, 260, 538, 625, 637, 794, 806, 1040
HpyF10VI	GCNNNNNNNGC	6 cut(s)	12, 15, 599, 602, 1037, 1066
HpyF3I	CTNAG	5 cut(s)	21, 147, 204, 334, 425
HpySE526I	ACGT	1 cut(s)	779
Hsp92II	CATG	4 cut(s)	542, 629, 758, 933
HspAI	GCGC	1 cut(s)	563
Kzo9I	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
LmnI	GCTCC	3 cut(s)	865, 993, 1054
Lsp1109I	GCAGC	8 cut(s)	2, 272, 275, 379, 605, 649, 1024, 1069
LweI	GCATC	1 cut(s)	160
MabI	ACCWGGT	2 cut(s)	348, 921
MaeI	CTAG	2 cut(s)	765, 1176
MaeII	ACGT	1 cut(s)	779
MaeIII	GTNAC	3 cut(s)	329, 1090, 1214
MalI	GATC	6 cut(s)	375, 483, 520, 543, 660, 981
MboI	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
MboII	GAAGA	5 cut(s)	47, 58, 598, 970, 1161
MflI	RGATCY	2 cut(s)	518, 979
MhlI	GDGCHC	3 cut(s)	235, 779, 796
MlsI	TGGCCA	1 cut(s)	725
MluCI	AATT	5 cut(s)	94, 119, 342, 455, 1102
MluNI	TGGCCA	1 cut(s)	725
MlyI	GAGTC	1 cut(s)	745
MmeI	TCCRAC	2 cut(s)	147, 813
Mox20I	TGGCCA	1 cut(s)	725
MroXI	GAANNNNTTC	1 cut(s)	1162
MscI	TGGCCA	1 cut(s)	725
MseI	TTAA	3 cut(s)	111, 345, 828
MslI	CAYNNNNRTG	1 cut(s)	537
Msp20I	TGGCCA	1 cut(s)	725
MspA1I	CMGCKG	2 cut(s)	596, 820
MspI	CCGG	2 cut(s)	955, 1223
MspR9I	CCNGG	4 cut(s)	296, 350, 923, 1052
MvaI	CCWGG	4 cut(s)	296, 350, 923, 1052
MwoI	GCNNNNNNNGC	6 cut(s)	12, 15, 599, 602, 1037, 1066
NdeII	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
NlaIII	CATG	4 cut(s)	542, 629, 758, 933
NlaIV	GGNNCC	4 cut(s)	386, 520, 736, 981
NmeAIII	GCCGAG	1 cut(s)	499
NmuCI	GTSAC	1 cut(s)	329
PaeR7I	CTCGAG	1 cut(s)	1153
PceI	AGGCCT	1 cut(s)	143
PdmI	GAANNNNTTC	1 cut(s)	1162
PfeI	GAWTC	2 cut(s)	38, 309
PfoI	TCCNGGA	1 cut(s)	1050
PleI	GAGTC	1 cut(s)	745
PpsI	GAGTC	1 cut(s)	745
Ppu21I	YACGTR	1 cut(s)	780
PpuMI	RGGWCCY	1 cut(s)	734
Psp5II	RGGWCCY	1 cut(s)	734
Psp6I	CCWGG	4 cut(s)	294, 348, 921, 1050
PspFI	CCCAGC	1 cut(s)	551
PspGI	CCWGG	4 cut(s)	294, 348, 921, 1050
PspN4I	GGNNCC	4 cut(s)	386, 520, 736, 981
PspPI	GGNCC	2 cut(s)	734, 1220
PspPPI	RGGWCCY	1 cut(s)	734
PstNI	CAGNNNCTG	2 cut(s)	269, 922
PsuI	RGATCY	2 cut(s)	518, 979
PvuII	CAGCTG	2 cut(s)	596, 820
RseI	CAYNNNNRTG	1 cut(s)	537
Rsr2I	CGGWCCG	1 cut(s)	1220
RsrII	CGGWCCG	1 cut(s)	1220
SaqAI	TTAA	3 cut(s)	111, 345, 828
Sau3AI	GATC	6 cut(s)	373, 481, 518, 541, 658, 979
Sau96I	GGNCC	2 cut(s)	734, 1220
SchI	GAGTC	1 cut(s)	745
ScrFI	CCNGG	4 cut(s)	296, 350, 923, 1052
SduI	GDGCHC	3 cut(s)	235, 779, 796
SexAI	ACCWGGT	2 cut(s)	348, 921
SfaNI	GCATC	1 cut(s)	160
Sfr274I	CTCGAG	1 cut(s)	1153
SinI	GGWCC	2 cut(s)	734, 1220
SlaI	CTCGAG	1 cut(s)	1153
SmiMI	CAYNNNNRTG	1 cut(s)	537
SmlI	CTYRAG	1 cut(s)	1153
SmoI	CTYRAG	1 cut(s)	1153
Sse9I	AATT	5 cut(s)	94, 119, 342, 455, 1102
SseBI	AGGCCT	1 cut(s)	143
SsiI	CCGC	2 cut(s)	602, 1069
SspMI	CTAG	2 cut(s)	765, 1176
StuI	AGGCCT	1 cut(s)	143
StyD4I	CCNGG	4 cut(s)	294, 348, 921, 1050
StyI	CCWWGG	3 cut(s)	388, 522, 991
TaaI	ACNGT	1 cut(s)	945
TaiI	ACGT	1 cut(s)	782
TaqI	TCGA	3 cut(s)	411, 567, 1154
TasI	AATT	5 cut(s)	94, 119, 342, 455, 1102
TauI	GCSGC	2 cut(s)	605, 1072
TfiI	GAWTC	2 cut(s)	38, 309
Tru1I	TTAA	3 cut(s)	111, 345, 828
Tru9I	TTAA	3 cut(s)	111, 345, 828
TscAI	CASTG	3 cut(s)	25, 745, 948
TseFI	GTSAC	1 cut(s)	329
TseI	GCWGC	9 cut(s)	6, 15, 260, 263, 367, 593, 637, 1037, 1057
Tsp45I	GTSAC	1 cut(s)	329
TspDTI	ATGAA	4 cut(s)	267, 516, 599, 1155
TspGWI	ACGGA	2 cut(s)	972, 1233
TspRI	CASTG	3 cut(s)	25, 745, 948
VneI	GTGCAC	1 cut(s)	792
VpaK11BI	GGWCC	2 cut(s)	734, 1220
XagI	CCTNNNNNAGG	1 cut(s)	1156
XapI	RAATTY	1 cut(s)	94
XhoI	CTCGAG	1 cut(s)	1153
XmnI	GAANNNNTTC	1 cut(s)	1162
XspI	CTAG	2 cut(s)	765, 1176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.