RLG00000035506
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
67823342 .. 67826946
3605 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035506

Sequence Viewer

Length: 1458 bp
ATGAGTTGCTTTTGCTGTAAAAAAAATTCAAAAAAAGAAGCAGAGAGGAACAATAAGAAGAACAACAACACCCACATCAACTGTAGCAAATCAAATCGTCTAGATACTTCAAAAGTGAATTCAGAGGGAAATGTAAAAAAGGAATTGGGTGTAAAAAAGGAGGAGGTCTCTAAGGTTGACCAGTTATCGATCGATGTAAAGGAGTTGAACATAAAGGAGGAGGTTTCTAAGGATGGAAAGACTAATGGCAGGCGGCCACAGGCATTTACGTTGGAGGAAATGGAAGTAGCAACCCAAAACTTCAGTCCTGACTGCTTTATAGGTGAAGGAGGATTCGGCAAAGTTTACAAGGGTCACTTAGAGAAAACTAACCAGGTTGTTGCTATCAAGCAGCTTGATCGCAATGGTTGCCAAGGGATCAGGGAATTTGTTGTTGAAGTATTGACACTAGGTTTGGCAGATCATCAGAATCTTGTCAAATTGATTGGCTTTTGTGCTGAGGGGGATCAAAGGCTATTGGTTTATGAATATATGCCATTTGGATCTTTGGAAAACCATTTGCATGATCTTCAAGCTGGCGGGAATGTTCTGGATTGGAATACAAGAATGAAGATCGCAGCTGGTGCAGCAAGAGGTTTAGAGTATCTGCATGAGAAAATGCAGCCTGCTATCATATATCGCGACCTGAAATGCTCAAACATTTTGCTTGGTGAGGATTATCATCCAAAGCTATCTGATTTTGGCTTGGCCAAAGTAGGTCCGAGTGGAGATAAGACTCATGTTTCAACTAGGGTTATGGGAACATATGGGTACTGTGCACCAGATTATGCAATGACAGGTCAGCTGACTTTTAAATCAGATGTTTATAGCTTCGGGGTGGTTCTTTTGGAGCTTATTACAGGCCGAAAAGCTATTGATGGCACAAGACCTCTCAGGGAGCAAAACCTCGTAGCATGGGCAAGACCCTTGTTCAGAGACCGGAAGAAATTCTCACAGATGGTGGATCCGTTGCTCCACGGTCAGTATCCTGTCAGGGGATTATACCAAGCTCTTGCTATTGCTGCGATGTGCGTTCAGGAGCAGCCTAATATGCGGCCTGTCATAACCGATATAGTGACAGCACTAAATTACCTTGCTTCCCAGAAATATGACCCCCAATTCCATCCAGTACAAAGCTCCAGAAGGAGTCCATCTTCTCCTAAAGTGCTGCTGCCATTCTCAATATTCACATACAGAGAATTTCTACTCTTCTCTCTTCTCCCCCGCCGTGTACATCAAAGTAACTGCAGAACCACAGCTCTTCCTTTGCGCAAGCTTTTTCCGAAAAACAAATTGGAAATGTATGTACCTAGTCTCGCCATGCAGGTAATGTGGAATATCATTGCTGGATGGAATGTGAAAACATGCATCATGGTGAGTTTTGAGGCAAGGAGGGAACCTGGAGGTTCTACTGAATGA

Protein Analysis

486

Amino Acids

54.71

Weight (kDa)

9.16

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 106 - 372 2.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 107 - 374 3.1e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1310
Acc36I ACCTGC 1 cut(s) 1354
AccII CGCG 1 cut(s) 681
AciI CCGC 4 cut(s) 253, 579, 1093, 1264
AclWI GGATC 5 cut(s) 425, 513, 550, 998, 1011
AcoI YGGCCR 2 cut(s) 254, 747
AcsI RAATTY 5 cut(s) 25, 118, 425, 986, 1238
AcuI CTGAAG 1 cut(s) 286
AfaI GTAC 4 cut(s) 812, 1170, 1272, 1347
AfiI CCNNNNNNNGG 1 cut(s) 1034
AgsI TTSAA 6 cut(s) 30, 111, 208, 437, 572, 786
AjnI CCWGG 2 cut(s) 372, 1438
AjuI GAANNNNNNNTTGG 2 cut(s) 1316, 1348
Alw21I GWGCWC 1 cut(s) 820
Alw26I GTCTC 3 cut(s) 172, 969, 1358
Alw44I GTGCAC 1 cut(s) 816
AlwI GGATC 5 cut(s) 425, 513, 550, 998, 1011
AoxI GGCC 4 cut(s) 254, 747, 901, 1094
ApaLI GTGCAC 1 cut(s) 816
ApeKI GCWGC 8 cut(s) 391, 617, 626, 661, 1061, 1081, 1207, 1210
ApoI RAATTY 5 cut(s) 25, 118, 425, 986, 1238
ArsI GACNNNNNNTTYG 4 cut(s) 289, 321, 436, 468
Asp700I GAANNNNTTC 1 cut(s) 986
AspLEI GCGC 1 cut(s) 1311
AspS9I GGNCC 1 cut(s) 758
AsuHPI GGTGA 3 cut(s) 335, 722, 1426
AvaII GGWCC 1 cut(s) 758
BaeGI GKGCMC 1 cut(s) 820
BalI TGGCCA 1 cut(s) 749
BamHI GGATCC 1 cut(s) 1003
Bbv12I GWGCWC 1 cut(s) 820
BbvCI CCTCAGC 1 cut(s) 498
BbvI GCAGC 8 cut(s) 403, 629, 638, 673, 1048, 1093, 1194, 1197
BccI CCATC 6 cut(s) 227, 911, 991, 1170, 1198, 1383
BceAI ACGGC 1 cut(s) 1251
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 2 cut(s) 374, 1440
BciVI GTATCC 1 cut(s) 1035
BcoDI GTCTC 3 cut(s) 172, 969, 1358
BfaI CTAG 4 cut(s) 101, 449, 789, 1350
BfmI CTRYAG 2 cut(s) 82, 1285
BfuAI ACCTGC 1 cut(s) 1354
BfuI GTATCC 1 cut(s) 1035
Bme1390I CCNGG 2 cut(s) 374, 1440
Bme18I GGWCC 1 cut(s) 758
BmgT120I GGNCC 1 cut(s) 758
BmiI GGNNCC 2 cut(s) 1005, 1437
BmrFI CCNGG 2 cut(s) 374, 1440
BmsI GCATC 1 cut(s) 1416
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 1 cut(s) 1162
Bpu10I CCTNAGC 1 cut(s) 498
Bsa29I ATCGAT 2 cut(s) 188, 192
BsaBI GATNNNNATC 1 cut(s) 720
BsaI GGTCTC 2 cut(s) 172, 969
BsaJI CCNNGG 2 cut(s) 412, 1015
BsaWI WCCGGW 1 cut(s) 978
Bsc4I CCNNNNNNNGG 1 cut(s) 1034
Bse1I ACTGG 2 cut(s) 181, 1166
Bse3DI GCAATG 3 cut(s) 409, 837, 1380
Bse8I GATNNNNATC 1 cut(s) 720
BseBI CCWGG 2 cut(s) 374, 1440
BseCI ATCGAT 2 cut(s) 188, 192
BseDI CCNNGG 2 cut(s) 412, 1015
BseGI GGATG 4 cut(s) 238, 721, 1162, 1394
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 1 cut(s) 1034
BseMI GCAATG 3 cut(s) 409, 837, 1380
BseMII CTCAG 2 cut(s) 489, 946
BseNI ACTGG 2 cut(s) 181, 1166
BseRI GAGGAG 2 cut(s) 176, 233
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 8 cut(s) 403, 629, 638, 673, 1048, 1093, 1194, 1197
BsgI GTGCAG 1 cut(s) 645
Bsh1236I CGCG 1 cut(s) 681
Bsh1285I CGRYCG 1 cut(s) 192
BshFI GGCC 4 cut(s) 256, 749, 903, 1096
BshVI ATCGAT 2 cut(s) 188, 192
BsiEI CGRYCG 1 cut(s) 192
BsiHKAI GWGCWC 1 cut(s) 820
BsiSI CCGG 1 cut(s) 979
BslI CCNNNNNNNGG 1 cut(s) 1034
BsmAI GTCTC 3 cut(s) 172, 969, 1358
BsnI GGCC 4 cut(s) 256, 749, 903, 1096
Bso31I GGTCTC 2 cut(s) 172, 969
Bsp1286I GDGCHC 1 cut(s) 820
Bsp1407I TGTACA 1 cut(s) 1270
Bsp143I GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
Bsp68I TCGCGA 1 cut(s) 681
BspACI CCGC 4 cut(s) 253, 579, 1093, 1264
BspANI GGCC 4 cut(s) 256, 749, 903, 1096
BspCNI CTCAG 2 cut(s) 490, 945
BspDI ATCGAT 2 cut(s) 188, 192
BspFNI CGCG 1 cut(s) 681
BspLI GGNNCC 2 cut(s) 1005, 1437
BspMAI CTGCAG 1 cut(s) 1289
BspMI ACCTGC 1 cut(s) 1354
BspPI GGATC 5 cut(s) 425, 513, 550, 998, 1011
BspQI GCTCTTC 1 cut(s) 1305
BspTNI GGTCTC 2 cut(s) 172, 969
BsrDI GCAATG 3 cut(s) 409, 837, 1380
BsrGI TGTACA 1 cut(s) 1270
BsrI ACTGG 2 cut(s) 181, 1166
BssECI CCNNGG 2 cut(s) 412, 1015
BssMI GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
BssT1I CCWWGG 1 cut(s) 412
Bst2UI CCWGG 2 cut(s) 374, 1440
Bst4CI ACNGT 3 cut(s) 83, 815, 1019
Bst6I CTCTTC 3 cut(s) 1253, 1260, 1305
BstAPI GCANNNNNTGC 2 cut(s) 408, 623
BstAUI TGTACA 1 cut(s) 1270
BstC8I GCNNGC 4 cut(s) 251, 577, 666, 1313
BstDEI CTNAG 5 cut(s) 171, 228, 358, 498, 932
BstDSI CCRYGG 1 cut(s) 1015
BstF5I GGATG 4 cut(s) 238, 721, 1162, 1394
BstFNI CGCG 1 cut(s) 681
BstHHI GCGC 1 cut(s) 1311
BstKTI GATC 9 cut(s) 192, 400, 420, 463, 508, 545, 568, 615, 1006
BstMAI GTCTC 3 cut(s) 172, 969, 1358
BstMBI GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
BstMCI CGRYCG 1 cut(s) 192
BstMWI GCNNNNNNNGC 5 cut(s) 408, 623, 626, 1061, 1090
BstNI CCWGG 2 cut(s) 374, 1440
BstNSI RCATGY 1 cut(s) 1407
BstSCI CCNGG 2 cut(s) 372, 1438
BstSFI CTRYAG 2 cut(s) 82, 1285
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 681
BstV1I GCAGC 8 cut(s) 403, 629, 638, 673, 1048, 1093, 1194, 1197
BstX2I RGATCY 2 cut(s) 542, 1003
BstYI RGATCY 2 cut(s) 542, 1003
Bsu15I ATCGAT 2 cut(s) 188, 192
BsuI GTATCC 1 cut(s) 1035
BsuRI GGCC 4 cut(s) 256, 749, 903, 1096
BsuTUI ATCGAT 2 cut(s) 188, 192
BtgI CCRYGG 1 cut(s) 1015
BtgZI GCGATG 1 cut(s) 1079
BtsCI GGATG 4 cut(s) 238, 721, 1162, 1394
BtuMI TCGCGA 1 cut(s) 681
BveI ACCTGC 1 cut(s) 1354
Cac8I GCNNGC 4 cut(s) 251, 577, 666, 1313
CfoI GCGC 1 cut(s) 1311
Cfr13I GGNCC 1 cut(s) 758
ClaI ATCGAT 2 cut(s) 188, 192
CsiI ACCWGGT 1 cut(s) 372
Csp6I GTAC 4 cut(s) 811, 1169, 1271, 1346
CviAII CATG 7 cut(s) 563, 650, 779, 954, 1360, 1404, 1411
CviQI GTAC 4 cut(s) 811, 1169, 1271, 1346
DdeI CTNAG 5 cut(s) 171, 228, 358, 498, 932
DpnI GATC 9 cut(s) 191, 399, 419, 462, 507, 544, 567, 614, 1005
DpnII GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
DraI TTTAAA 1 cut(s) 853
EaeI YGGCCR 2 cut(s) 254, 747
Eam1104I CTCTTC 3 cut(s) 1253, 1260, 1305
EarI CTCTTC 3 cut(s) 1253, 1260, 1305
Eco130I CCWWGG 1 cut(s) 412
Eco31I GGTCTC 2 cut(s) 172, 969
Eco47I GGWCC 1 cut(s) 758
Eco57I CTGAAG 1 cut(s) 286
EcoRI GAATTC 1 cut(s) 118
EcoRII CCWGG 2 cut(s) 372, 1438
EcoT14I CCWWGG 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 1409
ErhI CCWWGG 1 cut(s) 412
FaeI CATG 7 cut(s) 566, 653, 782, 957, 1363, 1407, 1414
FalI AAGNNNNNCTT 2 cut(s) 341, 373
FatI CATG 7 cut(s) 562, 649, 778, 953, 1359, 1403, 1410
FauI CCCGC 2 cut(s) 572, 1271
FauNDI CATATG 1 cut(s) 805
FokI GGATG 4 cut(s) 245, 708, 1149, 1401
FspBI CTAG 4 cut(s) 101, 449, 789, 1350
FspI TGCGCA 1 cut(s) 1310
GlaI GCGC 1 cut(s) 1310
GsuI CTGGAG 1 cut(s) 1162
HaeIII GGCC 4 cut(s) 256, 749, 903, 1096
HapII CCGG 1 cut(s) 979
HhaI GCGC 1 cut(s) 1311
Hin1II CATG 7 cut(s) 566, 653, 782, 957, 1363, 1407, 1414
Hin6I GCGC 1 cut(s) 1309
HinP1I GCGC 1 cut(s) 1309
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 1 cut(s) 1313
HinfI GANTC 4 cut(s) 333, 469, 775, 1186
HpaII CCGG 1 cut(s) 979
HphI GGTGA 3 cut(s) 335, 722, 1426
Hpy166II GTNNAC 4 cut(s) 178, 346, 818, 1271
Hpy188I TCNGA 7 cut(s) 124, 468, 736, 762, 859, 974, 1323
Hpy188III TCNNGA 6 cut(s) 101, 308, 590, 680, 1076, 1179
Hpy8I GTNNAC 4 cut(s) 178, 346, 818, 1271
HpyAV CCTTC 2 cut(s) 320, 1176
HpyCH4III ACNGT 3 cut(s) 83, 815, 1019
HpyCH4IV ACGT 1 cut(s) 269
HpyCH4V TGCA 9 cut(s) 562, 626, 649, 661, 818, 830, 1287, 1363, 1407
HpyF10VI GCNNNNNNNGC 5 cut(s) 408, 623, 626, 1061, 1090
HpyF3I CTNAG 5 cut(s) 171, 228, 358, 498, 932
HpySE526I ACGT 1 cut(s) 269
Hsp92II CATG 7 cut(s) 566, 653, 782, 957, 1363, 1407, 1414
HspAI GCGC 1 cut(s) 1309
Kzo9I GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
LguI GCTCTTC 1 cut(s) 1305
LmnI GCTCC 5 cut(s) 889, 937, 1017, 1078, 1181
Lsp1109I GCAGC 8 cut(s) 403, 629, 638, 673, 1048, 1093, 1194, 1197
LweI GCATC 1 cut(s) 1416
MabI ACCWGGT 1 cut(s) 372
MaeI CTAG 4 cut(s) 101, 449, 789, 1350
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 3 cut(s) 353, 1114, 1280
MalI GATC 9 cut(s) 191, 399, 419, 462, 507, 544, 567, 614, 1005
MboI GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
MboII GAAGA 8 cut(s) 70, 560, 622, 994, 1185, 1240, 1247, 1292
MflI RGATCY 2 cut(s) 542, 1003
MhlI GDGCHC 1 cut(s) 820
MlsI TGGCCA 1 cut(s) 749
MluNI TGGCCA 1 cut(s) 749
MlyI GAGTC 2 cut(s) 769, 1195
MmeI TCCRAC 1 cut(s) 252
Mox20I TGGCCA 1 cut(s) 749
Mph1103I ATGCAT 1 cut(s) 1409
MroXI GAANNNNTTC 1 cut(s) 986
MscI TGGCCA 1 cut(s) 749
MseI TTAA 1 cut(s) 852
MslI CAYNNNNRTG 2 cut(s) 561, 1412
Msp20I TGGCCA 1 cut(s) 749
MspA1I CMGCKG 2 cut(s) 620, 844
MspI CCGG 1 cut(s) 979
MspR9I CCNGG 2 cut(s) 374, 1440
MvaI CCWGG 2 cut(s) 374, 1440
MvnI CGCG 1 cut(s) 681
MwoI GCNNNNNNNGC 5 cut(s) 408, 623, 626, 1061, 1090
NdeI CATATG 1 cut(s) 805
NdeII GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
NlaIII CATG 7 cut(s) 566, 653, 782, 957, 1363, 1407, 1414
NlaIV GGNNCC 2 cut(s) 1005, 1437
NmuCI GTSAC 2 cut(s) 353, 1114
NruI TCGCGA 1 cut(s) 681
NsbI TGCGCA 1 cut(s) 1310
NsiI ATGCAT 1 cut(s) 1409
NspI RCATGY 1 cut(s) 1407
PciSI GCTCTTC 1 cut(s) 1305
PdmI GAANNNNTTC 1 cut(s) 986
PfeI GAWTC 2 cut(s) 333, 469
Ple19I CGATCG 1 cut(s) 192
PleI GAGTC 2 cut(s) 769, 1194
PpsI GAGTC 2 cut(s) 769, 1194
Psp6I CCWGG 2 cut(s) 372, 1438
PspGI CCWGG 2 cut(s) 372, 1438
PspN4I GGNNCC 2 cut(s) 1005, 1437
PspPI GGNCC 1 cut(s) 758
PstI CTGCAG 1 cut(s) 1289
PsuI RGATCY 2 cut(s) 542, 1003
PvuI CGATCG 1 cut(s) 192
PvuII CAGCTG 2 cut(s) 620, 844
RruI TCGCGA 1 cut(s) 681
RsaI GTAC 4 cut(s) 812, 1170, 1272, 1347
RsaNI GTAC 4 cut(s) 811, 1169, 1271, 1346
RseI CAYNNNNRTG 2 cut(s) 561, 1412
SapI GCTCTTC 1 cut(s) 1305
SaqAI TTAA 1 cut(s) 852
Sau3AI GATC 9 cut(s) 189, 397, 417, 460, 505, 542, 565, 612, 1003
Sau96I GGNCC 1 cut(s) 758
SchI GAGTC 2 cut(s) 769, 1195
ScrFI CCNGG 2 cut(s) 374, 1440
SduI GDGCHC 1 cut(s) 820
SexAI ACCWGGT 1 cut(s) 372
SfaNI GCATC 1 cut(s) 1416
SfcI CTRYAG 2 cut(s) 82, 1285
SinI GGWCC 1 cut(s) 758
SmiMI CAYNNNNRTG 2 cut(s) 561, 1412
SsiI CCGC 4 cut(s) 253, 579, 1093, 1264
SspI AATATT 1 cut(s) 1224
SspMI CTAG 4 cut(s) 101, 449, 789, 1350
StyD4I CCNGG 2 cut(s) 372, 1438
StyI CCWWGG 1 cut(s) 412
TaaI ACNGT 3 cut(s) 83, 815, 1019
TaiI ACGT 1 cut(s) 272
TaqI TCGA 2 cut(s) 188, 192
TatI WGTACW 2 cut(s) 1168, 1270
TauI GCSGC 2 cut(s) 256, 1096
TfiI GAWTC 2 cut(s) 333, 469
Tru1I TTAA 1 cut(s) 852
Tru9I TTAA 1 cut(s) 852
TseFI GTSAC 2 cut(s) 353, 1114
TseI GCWGC 8 cut(s) 391, 617, 626, 661, 1061, 1081, 1207, 1210
Tsp45I GTSAC 2 cut(s) 353, 1114
TspDTI ATGAA 2 cut(s) 540, 623
TspGWI ACGGA 1 cut(s) 996
VneI GTGCAC 1 cut(s) 816
VpaK11BI GGWCC 1 cut(s) 758
XapI RAATTY 5 cut(s) 25, 118, 425, 986, 1238
XbaI TCTAGA 1 cut(s) 100
XceI RCATGY 1 cut(s) 1407
XmnI GAANNNNTTC 1 cut(s) 986
XspI CTAG 4 cut(s) 101, 449, 789, 1350
Zsp2I ATGCAT 1 cut(s) 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.