Prupe.6G105400_v2.0.a1

Kiwellin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012598
Physical Location & Seq
Forward (+)
7469751 .. 7470804
1054 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G105400.1

Sequence Viewer

Length: 672 bp
ATGGCAAGTACTTTAGTCTTAATGTTGGTTTCTCTTTCCCTCATCTTAATCAATATCATTAGCCTTCCTCTTCCAACAATGGCCATCTCTTCATGCAAAGGTCCATGCAAAACCCCCAACGACTGTGCTGGTCAGCTCACCTGCATCAACCGCAAGTGCAATGACGACCCCGCTGTTGGGACACACATATGCAGTGGTGGTGGGGGCGGAGGTGGAGGAGGAGGAGGCGGAGGAGGAGGCAATTGTAAGTCCTCAGGAACTCTCAATTGCGGGGGAAAATCATTCCCCCAATTTACATGCTCGCCGCCAGTGACGTCATCCACGAGCGCTAAACTCACGCTCAATGACTTCAGCGAAGGCGGCGAAGGTGGGGACCCATCAGAGTGCGACGGGAGATTCCACTCTAACAGTGAGCGCGTGGTGGCACTTTCCACTGGGTGGTATGACGAGGGGTCAAGGTGTGGAAGGTTAATAAGAATTACGGCGAGCAATGGGAGGAGTGTGACGGCGAAAGTGGTGGACGAGTGTGATTCGGTGAACGGATGTGACAGAGAGCATGCAGGTCTGCCGCCGTGTAGGAACAACATTGTTGATGGGTCTGCAGCAGTGTGGAATGTTTTGGGATTGAACAAAGATTTAGGGATTGTGGACGTCACTTGGTCCTTGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

224

Amino Acids

22.65

Weight (kDa)

5.57

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 149
AatII GACGTC 2 cut(s) 317, 654
Acc36I ACCTGC 2 cut(s) 149, 551
AccB7I CCANNNNNTGG 1 cut(s) 438
AccII CGCG 1 cut(s) 417
AciI CCGC 8 cut(s) 151, 171, 207, 228, 270, 305, 360, 569
AcoI YGGCCR 1 cut(s) 81
AcuI CTGAAG 1 cut(s) 334
AcyI GRCGYC 2 cut(s) 314, 651
AdeI CACNNNGTG 1 cut(s) 438
AfaI GTAC 1 cut(s) 10
AfeI AGCGCT 1 cut(s) 328
AfiI CCNNNNNNNGG 3 cut(s) 176, 177, 438
AgsI TTSAA 1 cut(s) 628
AhdI GACNNNNNGTC 1 cut(s) 451
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Aor51HI AGCGCT 1 cut(s) 328
AoxI GGCC 2 cut(s) 81, 666
ApeKI GCWGC 1 cut(s) 602
AspLEI GCGC 2 cut(s) 329, 417
AspS9I GGNCC 3 cut(s) 101, 373, 660
AsuHPI GGTGA 2 cut(s) 130, 547
AvaII GGWCC 3 cut(s) 101, 373, 660
AxyI CCTNAGG 1 cut(s) 253
BalI TGGCCA 1 cut(s) 83
BauI CACGAG 1 cut(s) 322
BbvI GCAGC 1 cut(s) 614
BccI CCATC 3 cut(s) 92, 385, 587
BceAI ACGGC 3 cut(s) 498, 522, 556
BfaI CTAG 1 cut(s) 670
BfmI CTRYAG 1 cut(s) 600
BfoI RGCGCY 1 cut(s) 330
BfuAI ACCTGC 2 cut(s) 149, 551
BisI GCNGC 4 cut(s) 305, 361, 569, 603
BlsI GCNGC 4 cut(s) 306, 362, 570, 604
BmcAI AGTACT 1 cut(s) 10
Bme18I GGWCC 3 cut(s) 101, 373, 660
BmeRI GACNNNNNGTC 1 cut(s) 451
BmgT120I GGNCC 3 cut(s) 101, 373, 660
BmiI GGNNCC 2 cut(s) 374, 375
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 1 cut(s) 153
BmuI ACTGGG 1 cut(s) 444
BsaHI GRCGYC 2 cut(s) 314, 651
BsaJI CCNNGG 1 cut(s) 663
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 177, 438
Bse1I ACTGG 2 cut(s) 308, 439
Bse21I CCTNAGG 1 cut(s) 253
Bse3DI GCAATG 2 cut(s) 166, 496
BseDI CCNNGG 1 cut(s) 663
BseGI GGATG 2 cut(s) 317, 548
BseLI CCNNNNNNNGG 3 cut(s) 176, 177, 438
BseMI GCAATG 2 cut(s) 166, 496
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 2 cut(s) 308, 439
BseRI GAGGAG 6 cut(s) 231, 234, 237, 246, 249, 511
BseXI GCAGC 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 417
BshFI GGCC 2 cut(s) 83, 668
BslFI GGGAC 2 cut(s) 193, 386
BslI CCNNNNNNNGG 3 cut(s) 176, 177, 438
BsmFI GGGAC 2 cut(s) 193, 386
BsnI GGCC 2 cut(s) 83, 668
BspACI CCGC 8 cut(s) 151, 171, 207, 228, 270, 305, 360, 569
BspANI GGCC 2 cut(s) 83, 668
BspCNI CTCAG 1 cut(s) 266
BspFNI CGCG 1 cut(s) 417
BspLI GGNNCC 2 cut(s) 374, 375
BspMAI CTGCAG 1 cut(s) 604
BspMI ACCTGC 2 cut(s) 149, 551
BsrDI GCAATG 2 cut(s) 166, 496
BsrI ACTGG 2 cut(s) 308, 439
BssECI CCNNGG 1 cut(s) 663
BssNI GRCGYC 2 cut(s) 314, 651
BssSI CACGAG 1 cut(s) 322
BssT1I CCWWGG 1 cut(s) 663
Bst2BI CACGAG 1 cut(s) 322
Bst4CI ACNGT 2 cut(s) 125, 410
Bst6I CTCTTC 2 cut(s) 75, 94
BstACI GRCGYC 2 cut(s) 314, 651
BstC8I GCNNGC 3 cut(s) 302, 487, 558
BstDEI CTNAG 1 cut(s) 253
BstF5I GGATG 2 cut(s) 317, 548
BstFNI CGCG 1 cut(s) 417
BstH2I RGCGCY 1 cut(s) 330
BstHHI GCGC 2 cut(s) 329, 417
BstMWI GCNNNNNNNGC 2 cut(s) 150, 360
BstNSI RCATGY 2 cut(s) 300, 560
BstSFI CTRYAG 1 cut(s) 600
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 1 cut(s) 614
Bsu36I CCTNAGG 1 cut(s) 253
BsuRI GGCC 2 cut(s) 83, 668
BtsCI GGATG 2 cut(s) 317, 548
BtsI GCAGTG 2 cut(s) 199, 612
BtsIMutI CAGTG 5 cut(s) 199, 315, 415, 432, 612
BveI ACCTGC 2 cut(s) 149, 551
Cac8I GCNNGC 3 cut(s) 302, 487, 558
CfoI GCGC 2 cut(s) 329, 417
Cfr13I GGNCC 3 cut(s) 101, 373, 660
Csp6I GTAC 1 cut(s) 9
CviAII CATG 4 cut(s) 93, 105, 297, 557
CviJI RGCY 4 cut(s) 63, 83, 136, 668
CviKI_1 RGCY 4 cut(s) 63, 83, 136, 668
CviQI GTAC 1 cut(s) 9
DdeI CTNAG 1 cut(s) 253
DraIII CACNNNGTG 1 cut(s) 438
DriI GACNNNNNGTC 1 cut(s) 451
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 2 cut(s) 75, 94
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 2 cut(s) 75, 94
EciI GGCGGA 2 cut(s) 222, 243
Eco130I CCWWGG 1 cut(s) 663
Eco47I GGWCC 3 cut(s) 101, 373, 660
Eco47III AGCGCT 1 cut(s) 328
Eco57I CTGAAG 1 cut(s) 334
Eco81I CCTNAGG 1 cut(s) 253
EcoO109I RGGNCCY 1 cut(s) 373
EcoT14I CCWWGG 1 cut(s) 663
ErhI CCWWGG 1 cut(s) 663
FaeI CATG 4 cut(s) 96, 108, 300, 560
FaiI YATR 7 cut(s) 94, 106, 188, 190, 298, 444, 558
FaqI GGGAC 2 cut(s) 193, 386
FatI CATG 4 cut(s) 92, 104, 296, 556
FauI CCCGC 2 cut(s) 178, 263
FauNDI CATATG 1 cut(s) 188
Fnu4HI GCNGC 4 cut(s) 305, 361, 569, 603
FokI GGATG 2 cut(s) 304, 555
Fsp4HI GCNGC 4 cut(s) 305, 361, 569, 603
FspBI CTAG 1 cut(s) 670
GlaI GCGC 2 cut(s) 328, 416
GluI GCNGC 4 cut(s) 305, 361, 569, 603
HaeII RGCGCY 1 cut(s) 330
HaeIII GGCC 2 cut(s) 83, 668
HhaI GCGC 2 cut(s) 329, 417
Hin1I GRCGYC 2 cut(s) 314, 651
Hin1II CATG 4 cut(s) 96, 108, 300, 560
Hin6I GCGC 2 cut(s) 327, 415
HinP1I GCGC 2 cut(s) 327, 415
HinfI GANTC 2 cut(s) 396, 530
HphI GGTGA 2 cut(s) 130, 547
Hpy166II GTNNAC 3 cut(s) 520, 538, 649
Hpy188I TCNGA 1 cut(s) 382
Hpy188III TCNNGA 1 cut(s) 255
Hpy8I GTNNAC 3 cut(s) 520, 538, 649
Hpy99I CGWCG 1 cut(s) 392
HpyAV CCTTC 4 cut(s) 74, 350, 359, 459
HpyCH4III ACNGT 2 cut(s) 125, 410
HpyCH4IV ACGT 2 cut(s) 314, 651
HpyCH4V TGCA 7 cut(s) 96, 108, 144, 159, 192, 560, 602
HpyF10VI GCNNNNNNNGC 2 cut(s) 150, 360
HpyF3I CTNAG 1 cut(s) 253
HpySE526I ACGT 2 cut(s) 314, 651
Hsp92I GRCGYC 2 cut(s) 314, 651
Hsp92II CATG 4 cut(s) 96, 108, 300, 560
HspAI GCGC 2 cut(s) 327, 415
KflI GGGWCCC 1 cut(s) 373
LpnPI CCDG 6 cut(s) 114, 154, 240, 321, 420, 546
Lsp1109I GCAGC 1 cut(s) 614
LweI GCATC 1 cut(s) 153
MaeI CTAG 1 cut(s) 670
MaeII ACGT 2 cut(s) 314, 651
MaeIII GTNAC 4 cut(s) 310, 502, 545, 652
MboII GAAGA 2 cut(s) 62, 81
MfeI CAATTG 2 cut(s) 241, 265
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 4 cut(s) 241, 265, 290, 477
MluNI TGGCCA 1 cut(s) 83
MmeI TCCRAC 1 cut(s) 98
Mox20I TGGCCA 1 cut(s) 83
MscI TGGCCA 1 cut(s) 83
MseI TTAA 3 cut(s) 20, 47, 470
MslI CAYNNNNRTG 2 cut(s) 187, 382
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 173
MunI CAATTG 2 cut(s) 241, 265
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 2 cut(s) 150, 360
NdeI CATATG 1 cut(s) 188
NlaIII CATG 4 cut(s) 96, 108, 300, 560
NlaIV GGNNCC 2 cut(s) 374, 375
NmuCI GTSAC 4 cut(s) 310, 502, 545, 652
NspI RCATGY 2 cut(s) 300, 560
PaeI GCATGC 1 cut(s) 560
PaqCI CACCTGC 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PfeI GAWTC 2 cut(s) 396, 530
PflMI CCANNNNNTGG 1 cut(s) 438
PkrI GCNGC 4 cut(s) 306, 362, 570, 604
PpuMI RGGWCCY 1 cut(s) 373
Psp5II RGGWCCY 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 374, 375
PspPI GGNCC 3 cut(s) 101, 373, 660
PspPPI RGGWCCY 1 cut(s) 373
PstI CTGCAG 1 cut(s) 604
RsaI GTAC 1 cut(s) 10
RsaNI GTAC 1 cut(s) 9
RseI CAYNNNNRTG 2 cut(s) 187, 382
SaqAI TTAA 3 cut(s) 20, 47, 470
SatI GCNGC 4 cut(s) 305, 361, 569, 603
Sau96I GGNCC 3 cut(s) 101, 373, 660
ScaI AGTACT 1 cut(s) 10
SfaNI GCATC 1 cut(s) 153
SfcI CTRYAG 1 cut(s) 600
SinI GGWCC 3 cut(s) 101, 373, 660
SmiMI CAYNNNNRTG 2 cut(s) 187, 382
SphI GCATGC 1 cut(s) 560
Sse9I AATT 4 cut(s) 241, 265, 290, 477
SsiI CCGC 8 cut(s) 151, 171, 207, 228, 270, 305, 360, 569
SspMI CTAG 1 cut(s) 670
StyI CCWWGG 1 cut(s) 663
TaaI ACNGT 2 cut(s) 125, 410
TaiI ACGT 2 cut(s) 317, 654
TasI AATT 4 cut(s) 241, 265, 290, 477
TatI WGTACW 1 cut(s) 8
TauI GCSGC 3 cut(s) 307, 363, 571
TfiI GAWTC 2 cut(s) 396, 530
Tru1I TTAA 3 cut(s) 20, 47, 470
Tru9I TTAA 3 cut(s) 20, 47, 470
TscAI CASTG 5 cut(s) 199, 315, 415, 439, 612
TseFI GTSAC 4 cut(s) 310, 502, 545, 652
TseI GCWGC 1 cut(s) 602
Tsp45I GTSAC 4 cut(s) 310, 502, 545, 652
TspDTI ATGAA 1 cut(s) 81
TspGWI ACGGA 1 cut(s) 555
TspRI CASTG 5 cut(s) 199, 315, 415, 439, 612
Van91I CCANNNNNTGG 1 cut(s) 438
VpaK11BI GGWCC 3 cut(s) 101, 373, 660
XceI RCATGY 2 cut(s) 300, 560
XspI CTAG 1 cut(s) 670
ZraI GACGTC 2 cut(s) 315, 652
ZrmI AGTACT 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.