Prupe.6G105800_v2.0.a1

Kiwellin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012598
Physical Location & Seq
Forward (+)
7500446 .. 7501329
884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G105800.1

Sequence Viewer

Length: 663 bp
ATGGCAAGCACTTCAGTGTTGTTGGTTTCTCTTTCCCTCATCTTGATCAATATAATCACCTTACCTCTCCTATCAACCGCCATCTCCTCCTGCAACGGCGCTTGCAAAACCCTCAACGATTGCGCGGGCCAGCTCATTTGCATCAACGGCAAGTGCAACGACGACCCTGATATTGGGTCTAACGAATGCGGGGGAGGAGGAGGCTCATCATCGCCACCTCCTACGACGAATAATTGTCAACCCTCAGGAACTCTAGTTTGCCAGGGAAAATCATACCCTAAATACACATGCTCCCCGCCAGTGACGTCATCCACTAAAGCCAGCCTCACCCTCAACGATTTCAGTGAAGGTGGGGACGGTGGTGGCCCATCATATTGTGACGAAAAATACCATGCAAATAGTGAGAGGGTTGTGGCACTTTCTACTGGGTGGTTTGATAATAAGTCGAGGTGCCTGAAGATGATAAGAATTAGGGCAAGCAATGGGAAGAGTGTGACAGCCAAAGTGGTGGATGAATGCGATTCACGTGCTGGATGTGATGCAGAGCATGCAGGTCAGCCGCCGTGTAGGAACGATATTGTTGATGGGTCTGCGGCTGTATGGAATGCTTTGGGACTGAACCAAGATTTGGGCGTTGTTCCTGTTACTTGGTCAATGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

221

Amino Acids

22.74

Weight (kDa)

5.1

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 308
Acc36I ACCTGC 1 cut(s) 542
AccB1I GGYRCC 1 cut(s) 450
AccB7I CCANNNNNTGG 1 cut(s) 628
AccII CGCG 1 cut(s) 125
AciI CCGC 6 cut(s) 78, 125, 189, 296, 560, 593
AcuI CTGAAG 1 cut(s) 476
AcvI CACGTG 1 cut(s) 527
AcyI GRCGYC 1 cut(s) 305
AfiI CCNNNNNNNGG 2 cut(s) 173, 628
AjnI CCWGG 1 cut(s) 261
AjuI GAANNNNNNNTTGG 2 cut(s) 611, 643
AleI CACNNNNGTG 1 cut(s) 14
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
AoxI GGCC 3 cut(s) 127, 364, 657
AspLEI GCGC 2 cut(s) 101, 125
AspS9I GGNCC 2 cut(s) 127, 365
AsuHPI GGTGA 2 cut(s) 49, 319
AxyI CCTNAGG 1 cut(s) 244
BanI GGYRCC 1 cut(s) 450
BbrPI CACGTG 1 cut(s) 527
BccI CCATC 3 cut(s) 89, 376, 578
BceAI ACGGC 3 cut(s) 112, 163, 547
BcgI CGANNNNNNTGC 2 cut(s) 509, 543
BciT130I CCWGG 1 cut(s) 263
BclI TGATCA 1 cut(s) 45
BfaI CTAG 2 cut(s) 254, 661
BfoI RGCGCY 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 542
BisI GCNGC 2 cut(s) 560, 594
BlsI GCNGC 2 cut(s) 561, 595
Bme1390I CCNGG 1 cut(s) 263
BmgT120I GGNCC 2 cut(s) 127, 365
BmiI GGNNCC 1 cut(s) 452
BmrFI CCNGG 1 cut(s) 263
BmrI ACTGGG 1 cut(s) 435
BmsI GCATC 2 cut(s) 150, 529
BmuI ACTGGG 1 cut(s) 435
BsaAI YACGTR 1 cut(s) 527
BsaHI GRCGYC 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 262
BsaXI ACNNNNNCTCC 2 cut(s) 275, 305
Bsc4I CCNNNNNNNGG 2 cut(s) 173, 628
Bse1I ACTGG 2 cut(s) 299, 430
Bse21I CCTNAGG 1 cut(s) 244
Bse3DI GCAATG 1 cut(s) 487
BseBI CCWGG 1 cut(s) 263
BseDI CCNNGG 1 cut(s) 262
BseGI GGATG 3 cut(s) 308, 517, 539
BseLI CCNNNNNNNGG 2 cut(s) 173, 628
BseMI GCAATG 1 cut(s) 487
BseMII CTCAG 1 cut(s) 258
BseNI ACTGG 2 cut(s) 299, 430
BseRI GAGGAG 3 cut(s) 76, 210, 213
Bsh1236I CGCG 1 cut(s) 125
BshFI GGCC 3 cut(s) 129, 366, 659
BshNI GGYRCC 1 cut(s) 450
BslFI GGGAC 2 cut(s) 368, 627
BslI CCNNNNNNNGG 2 cut(s) 173, 628
BsmFI GGGAC 2 cut(s) 368, 627
BsmI GAATGC 3 cut(s) 191, 521, 610
BsnI GGCC 3 cut(s) 129, 366, 659
Bsp143I GATC 1 cut(s) 45
BspACI CCGC 6 cut(s) 78, 125, 189, 296, 560, 593
BspANI GGCC 3 cut(s) 129, 366, 659
BspCNI CTCAG 1 cut(s) 257
BspFNI CGCG 1 cut(s) 125
BspLI GGNNCC 1 cut(s) 452
BspMI ACCTGC 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 450
BsrDI GCAATG 1 cut(s) 487
BsrI ACTGG 2 cut(s) 299, 430
BssECI CCNNGG 1 cut(s) 262
BssMI GATC 1 cut(s) 45
BssNI GRCGYC 1 cut(s) 305
Bst2UI CCWGG 1 cut(s) 263
Bst4CI ACNGT 1 cut(s) 359
Bst6I CTCTTC 1 cut(s) 482
BstACI GRCGYC 1 cut(s) 305
BstAPI GCANNNNNTGC 1 cut(s) 548
BstBAI YACGTR 1 cut(s) 527
BstC8I GCNNGC 7 cut(s) 7, 103, 127, 131, 322, 478, 549
BstDEI CTNAG 1 cut(s) 244
BstF5I GGATG 3 cut(s) 308, 517, 539
BstFNI CGCG 1 cut(s) 125
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 2 cut(s) 101, 125
BstKTI GATC 1 cut(s) 48
BstMBI GATC 1 cut(s) 45
BstMWI GCNNNNNNNGC 2 cut(s) 147, 548
BstNI CCWGG 1 cut(s) 263
BstNSI RCATGY 2 cut(s) 291, 551
BstSCI CCNGG 1 cut(s) 261
BstUI CGCG 1 cut(s) 125
BstXI CCANNNNNNTGG 1 cut(s) 508
Bsu36I CCTNAGG 1 cut(s) 244
BsuRI GGCC 3 cut(s) 129, 366, 659
BtgZI GCGATG 1 cut(s) 195
BtsCI GGATG 3 cut(s) 308, 517, 539
BtsIMutI CAGTG 3 cut(s) 21, 306, 349
BveI ACCTGC 1 cut(s) 542
Cac8I GCNNGC 7 cut(s) 7, 103, 127, 131, 322, 478, 549
CfoI GCGC 2 cut(s) 101, 125
Cfr13I GGNCC 2 cut(s) 127, 365
CviAII CATG 3 cut(s) 288, 392, 548
DdeI CTNAG 1 cut(s) 244
DpnI GATC 1 cut(s) 47
DpnII GATC 1 cut(s) 45
Eam1104I CTCTTC 1 cut(s) 482
EarI CTCTTC 1 cut(s) 482
Eco57I CTGAAG 1 cut(s) 476
Eco72I CACGTG 1 cut(s) 527
Eco81I CCTNAGG 1 cut(s) 244
EcoRII CCWGG 1 cut(s) 261
FaeI CATG 3 cut(s) 291, 395, 551
FaiI YATR 7 cut(s) 53, 274, 289, 373, 393, 549, 601
FaqI GGGAC 2 cut(s) 368, 627
FatI CATG 3 cut(s) 287, 391, 547
FauI CCCGC 3 cut(s) 118, 182, 303
FbaI TGATCA 1 cut(s) 45
Fnu4HI GCNGC 2 cut(s) 560, 594
FokI GGATG 3 cut(s) 295, 524, 546
Fsp4HI GCNGC 2 cut(s) 560, 594
FspBI CTAG 2 cut(s) 254, 661
GlaI GCGC 2 cut(s) 100, 124
GluI GCNGC 2 cut(s) 560, 594
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 3 cut(s) 129, 366, 659
HhaI GCGC 2 cut(s) 101, 125
Hin1I GRCGYC 1 cut(s) 305
Hin1II CATG 3 cut(s) 291, 395, 551
Hin6I GCGC 2 cut(s) 99, 123
HinP1I GCGC 2 cut(s) 99, 123
HincII GTYRAC 1 cut(s) 239
HindII GTYRAC 1 cut(s) 239
HinfI GANTC 1 cut(s) 521
HphI GGTGA 2 cut(s) 49, 319
Hpy166II GTNNAC 1 cut(s) 239
Hpy188III TCNNGA 2 cut(s) 43, 246
Hpy8I GTNNAC 1 cut(s) 239
Hpy99I CGWCG 2 cut(s) 164, 229
HpyAV CCTTC 1 cut(s) 341
HpyCH4III ACNGT 1 cut(s) 359
HpyCH4IV ACGT 2 cut(s) 305, 526
HpyCH4V TGCA 7 cut(s) 93, 105, 141, 156, 395, 542, 551
HpyF10VI GCNNNNNNNGC 2 cut(s) 147, 548
HpyF3I CTNAG 1 cut(s) 244
HpySE526I ACGT 2 cut(s) 305, 526
Hsp92I GRCGYC 1 cut(s) 305
Hsp92II CATG 3 cut(s) 291, 395, 551
HspAI GCGC 2 cut(s) 99, 123
Ksp22I TGATCA 1 cut(s) 45
Kzo9I GATC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 296
LweI GCATC 2 cut(s) 150, 529
MaeI CTAG 2 cut(s) 254, 661
MaeII ACGT 2 cut(s) 305, 526
MaeIII GTNAC 4 cut(s) 301, 377, 493, 643
MalI GATC 1 cut(s) 47
MboI GATC 1 cut(s) 45
MboII GAAGA 2 cut(s) 469, 499
MluCI AATT 2 cut(s) 232, 468
MslI CAYNNNNRTG 1 cut(s) 14
MspR9I CCNGG 1 cut(s) 263
Mva1269I GAATGC 3 cut(s) 191, 521, 610
MvaI CCWGG 1 cut(s) 263
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 2 cut(s) 147, 548
NdeII GATC 1 cut(s) 45
NlaIII CATG 3 cut(s) 291, 395, 551
NlaIV GGNNCC 1 cut(s) 452
NmuCI GTSAC 3 cut(s) 301, 377, 493
NspI RCATGY 2 cut(s) 291, 551
OliI CACNNNNGTG 1 cut(s) 14
PaeI GCATGC 1 cut(s) 551
PctI GAATGC 3 cut(s) 191, 521, 610
PfeI GAWTC 1 cut(s) 521
PflMI CCANNNNNTGG 1 cut(s) 628
PkrI GCNGC 2 cut(s) 561, 595
PmaCI CACGTG 1 cut(s) 527
PmlI CACGTG 1 cut(s) 527
Ppu21I YACGTR 1 cut(s) 527
Psp6I CCWGG 1 cut(s) 261
PspCI CACGTG 1 cut(s) 527
PspGI CCWGG 1 cut(s) 261
PspN4I GGNNCC 1 cut(s) 452
PspPI GGNCC 2 cut(s) 127, 365
RseI CAYNNNNRTG 1 cut(s) 14
SatI GCNGC 2 cut(s) 560, 594
Sau3AI GATC 1 cut(s) 45
Sau96I GGNCC 2 cut(s) 127, 365
ScrFI CCNGG 1 cut(s) 263
SetI ASST 9 cut(s) 62, 67, 135, 220, 308, 352, 452, 529, 556
SfaNI GCATC 2 cut(s) 150, 529
SmiMI CAYNNNNRTG 1 cut(s) 14
SphI GCATGC 1 cut(s) 551
Sse9I AATT 2 cut(s) 232, 468
SsiI CCGC 6 cut(s) 78, 125, 189, 296, 560, 593
SspMI CTAG 2 cut(s) 254, 661
StyD4I CCNGG 1 cut(s) 261
TaaI ACNGT 1 cut(s) 359
TaiI ACGT 2 cut(s) 308, 529
TaqI TCGA 1 cut(s) 446
TasI AATT 2 cut(s) 232, 468
TauI GCSGC 2 cut(s) 562, 596
TfiI GAWTC 1 cut(s) 521
TscAI CASTG 3 cut(s) 21, 306, 349
TseFI GTSAC 3 cut(s) 301, 377, 493
Tsp45I GTSAC 3 cut(s) 301, 377, 493
TspDTI ATGAA 1 cut(s) 528
TspRI CASTG 3 cut(s) 21, 306, 349
Van91I CCANNNNNTGG 1 cut(s) 628
XceI RCATGY 2 cut(s) 291, 551
XspI CTAG 2 cut(s) 254, 661
ZraI GACGTC 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.