Pentatricopeptide repeat-containing protein At2g27800
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27775 AT2G27775 |
| fragaria_vesca | FvH4_3g24190 |
| malus_domestica | MD03G1135500.v1.1 MD11G1158100.v1.1 |
| prunus_persica | Prupe.6G119900_v2.0.a1 Prupe.6G119900_v2.0.a1 Prupe.6G119900_v2.0.a1 |
| pyrus_communis | pycom03g09150 pycom11g12840 |
| rosa_chinensis | RchiOBHm_Chr5g0043301 |
| rosa_roxburghii | Rroxscaffold_1G00037520 |
| rosa_samantha | Rh5AG290600 Rh5BG297200 Rh5CG327000 Rh5DG306800 |
| rosa_wichuraiana | Rw5G026890 Rw5G026960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 75 |
| AgsI | TTSAA | 2 cut(s) | 138, 230 |
| AluBI | AGCT | 3 cut(s) | 8, 222, 274 |
| AluI | AGCT | 3 cut(s) | 8, 222, 274 |
| Alw21I | GWGCWC | 1 cut(s) | 224 |
| ApoI | RAATTY | 1 cut(s) | 75 |
| AspLEI | GCGC | 1 cut(s) | 245 |
| BanII | GRGCYC | 1 cut(s) | 224 |
| Bbv12I | GWGCWC | 1 cut(s) | 224 |
| BccI | CCATC | 1 cut(s) | 135 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 16, 50 |
| BfaI | CTAG | 2 cut(s) | 284, 331 |
| BfoI | RGCGCY | 1 cut(s) | 246 |
| Bse3DI | GCAATG | 1 cut(s) | 246 |
| BseMI | GCAATG | 1 cut(s) | 246 |
| BseRI | GAGGAG | 1 cut(s) | 283 |
| Bsh1285I | CGRYCG | 1 cut(s) | 15 |
| BsiEI | CGRYCG | 1 cut(s) | 15 |
| BsiHKAI | GWGCWC | 1 cut(s) | 224 |
| BsmI | GAATGC | 1 cut(s) | 173 |
| Bsp1286I | GDGCHC | 1 cut(s) | 224 |
| Bsp143I | GATC | 2 cut(s) | 12, 23 |
| BspCNI | CTCAG | 1 cut(s) | 333 |
| BspQI | GCTCTTC | 1 cut(s) | 61 |
| BsrDI | GCAATG | 1 cut(s) | 246 |
| BssMI | GATC | 2 cut(s) | 12, 23 |
| Bst6I | CTCTTC | 2 cut(s) | 61, 231 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 259 |
| BstDEI | CTNAG | 1 cut(s) | 320 |
| BstH2I | RGCGCY | 1 cut(s) | 246 |
| BstHHI | GCGC | 1 cut(s) | 245 |
| BstKTI | GATC | 2 cut(s) | 15, 26 |
| BstMBI | GATC | 2 cut(s) | 12, 23 |
| BstMCI | CGRYCG | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 259 |
| CfoI | GCGC | 1 cut(s) | 245 |
| CviAII | CATG | 2 cut(s) | 90, 115 |
| CviJI | RGCY | 6 cut(s) | 8, 53, 202, 222, 274, 287 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 53, 202, 222, 274, 287 |
| DdeI | CTNAG | 1 cut(s) | 320 |
| DpnI | GATC | 2 cut(s) | 14, 25 |
| DpnII | GATC | 2 cut(s) | 12, 23 |
| Eam1104I | CTCTTC | 2 cut(s) | 61, 231 |
| EarI | CTCTTC | 2 cut(s) | 61, 231 |
| Ecl136II | GAGCTC | 1 cut(s) | 222 |
| Eco24I | GRGCYC | 1 cut(s) | 224 |
| Eco53kI | GAGCTC | 1 cut(s) | 222 |
| EcoICRI | GAGCTC | 1 cut(s) | 222 |
| EcoT38I | GRGCYC | 1 cut(s) | 224 |
| FaeI | CATG | 2 cut(s) | 93, 118 |
| FaiI | YATR | 5 cut(s) | 91, 116, 147, 165, 186 |
| FatI | CATG | 2 cut(s) | 89, 114 |
| FriOI | GRGCYC | 1 cut(s) | 224 |
| FspBI | CTAG | 2 cut(s) | 284, 331 |
| GlaI | GCGC | 1 cut(s) | 244 |
| HaeII | RGCGCY | 1 cut(s) | 246 |
| HhaI | GCGC | 1 cut(s) | 245 |
| Hin1II | CATG | 2 cut(s) | 93, 118 |
| Hin6I | GCGC | 1 cut(s) | 243 |
| HinP1I | GCGC | 1 cut(s) | 243 |
| HinfI | GANTC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 1 cut(s) | 298 |
| Hpy188III | TCNNGA | 1 cut(s) | 138 |
| Hpy99I | CGWCG | 2 cut(s) | 126, 213 |
| HpyAV | CCTTC | 3 cut(s) | 105, 141, 293 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 171 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 1 cut(s) | 320 |
| Hsp92II | CATG | 2 cut(s) | 93, 118 |
| HspAI | GCGC | 1 cut(s) | 243 |
| Kzo9I | GATC | 2 cut(s) | 12, 23 |
| LguI | GCTCTTC | 1 cut(s) | 61 |
| LmnI | GCTCC | 1 cut(s) | 279 |
| LpnPI | CCDG | 4 cut(s) | 3, 47, 184, 291 |
| MaeI | CTAG | 2 cut(s) | 284, 331 |
| MalI | GATC | 2 cut(s) | 14, 25 |
| MboI | GATC | 2 cut(s) | 12, 23 |
| MboII | GAAGA | 4 cut(s) | 33, 78, 126, 218 |
| MhlI | GDGCHC | 1 cut(s) | 224 |
| MluCI | AATT | 4 cut(s) | 75, 109, 215, 313 |
| MnlI | CCTC | 4 cut(s) | 129, 245, 301, 304 |
| Mva1269I | GAATGC | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 2 cut(s) | 12, 23 |
| NlaIII | CATG | 2 cut(s) | 93, 118 |
| PciSI | GCTCTTC | 1 cut(s) | 61 |
| PctI | GAATGC | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 100 |
| Ple19I | CGATCG | 1 cut(s) | 15 |
| Psp124BI | GAGCTC | 1 cut(s) | 224 |
| PvuI | CGATCG | 1 cut(s) | 15 |
| SacI | GAGCTC | 1 cut(s) | 224 |
| SapI | GCTCTTC | 1 cut(s) | 61 |
| Sau3AI | GATC | 2 cut(s) | 12, 23 |
| SduI | GDGCHC | 1 cut(s) | 224 |
| SetI | ASST | 5 cut(s) | 10, 224, 276, 293, 304 |
| Sse9I | AATT | 4 cut(s) | 75, 109, 215, 313 |
| SspMI | CTAG | 2 cut(s) | 284, 331 |
| SstI | GAGCTC | 1 cut(s) | 224 |
| TaqI | TCGA | 3 cut(s) | 11, 26, 98 |
| TasI | AATT | 4 cut(s) | 75, 109, 215, 313 |
| TfiI | GAWTC | 1 cut(s) | 100 |
| TspDTI | ATGAA | 3 cut(s) | 103, 180, 201 |
| XapI | RAATTY | 1 cut(s) | 75 |
| XspI | CTAG | 2 cut(s) | 284, 331 |