Pentatricopeptide repeat-containing protein At2g27800
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27775 AT2G27775 |
| fragaria_vesca | FvH4_3g24190 |
| malus_domestica | MD03G1135500.v1.1 MD11G1158100.v1.1 |
| prunus_persica | Prupe.6G119900_v2.0.a1 Prupe.6G119900_v2.0.a1 Prupe.6G119900_v2.0.a1 |
| pyrus_communis | pycom03g09150 pycom11g12840 |
| rosa_chinensis | RchiOBHm_Chr5g0043301 |
| rosa_roxburghii | Rroxscaffold_1G00037520 |
| rosa_samantha | Rh5AG290600 Rh5BG297200 Rh5CG327000 Rh5DG306800 |
| rosa_wichuraiana | Rw5G026890 Rw5G026960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 39 |
| AcsI | RAATTY | 1 cut(s) | 87 |
| AcuI | CTGAAG | 1 cut(s) | 273 |
| AfaI | GTAC | 1 cut(s) | 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 150 |
| AgsI | TTSAA | 3 cut(s) | 12, 93, 182 |
| AluBI | AGCT | 5 cut(s) | 8, 174, 195, 226, 239 |
| AluI | AGCT | 5 cut(s) | 8, 174, 195, 226, 239 |
| Alw21I | GWGCWC | 1 cut(s) | 176 |
| Alw26I | GTCTC | 1 cut(s) | 223 |
| ApeKI | GCWGC | 4 cut(s) | 53, 203, 206, 239 |
| ApoI | RAATTY | 1 cut(s) | 87 |
| AspLEI | GCGC | 3 cut(s) | 39, 41, 287 |
| BanII | GRGCYC | 1 cut(s) | 176 |
| Bbv12I | GWGCWC | 1 cut(s) | 176 |
| BbvI | GCAGC | 4 cut(s) | 65, 190, 193, 226 |
| BceAI | ACGGC | 1 cut(s) | 167 |
| BcoDI | GTCTC | 1 cut(s) | 223 |
| BfaI | CTAG | 1 cut(s) | 236 |
| BisI | GCNGC | 4 cut(s) | 54, 204, 207, 240 |
| BlsI | GCNGC | 4 cut(s) | 55, 205, 208, 241 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 150 |
| Bse3DI | GCAATG | 1 cut(s) | 198 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 150 |
| BseMI | GCAATG | 1 cut(s) | 198 |
| BsePI | GCGCGC | 1 cut(s) | 37 |
| BseRI | GAGGAG | 2 cut(s) | 235, 238 |
| BseXI | GCAGC | 4 cut(s) | 65, 190, 193, 226 |
| Bsh1236I | CGCG | 1 cut(s) | 39 |
| BsiHKAI | GWGCWC | 1 cut(s) | 176 |
| BsiSI | CCGG | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 150 |
| BsmAI | GTCTC | 1 cut(s) | 223 |
| BsmBI | CGTCTC | 1 cut(s) | 223 |
| Bsp1286I | GDGCHC | 1 cut(s) | 176 |
| Bsp1407I | TGTACA | 1 cut(s) | 306 |
| BspFNI | CGCG | 1 cut(s) | 39 |
| BsrDI | GCAATG | 1 cut(s) | 198 |
| BsrGI | TGTACA | 1 cut(s) | 306 |
| BssHII | GCGCGC | 1 cut(s) | 37 |
| Bst6I | CTCTTC | 1 cut(s) | 157 |
| BstAUI | TGTACA | 1 cut(s) | 306 |
| BstC8I | GCNNGC | 3 cut(s) | 39, 176, 211 |
| BstFNI | CGCG | 1 cut(s) | 39 |
| BstHHI | GCGC | 3 cut(s) | 39, 41, 287 |
| BstMAI | GTCTC | 1 cut(s) | 223 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 45 |
| BstNSI | RCATGY | 1 cut(s) | 105 |
| BstUI | CGCG | 1 cut(s) | 39 |
| BstV1I | GCAGC | 4 cut(s) | 65, 190, 193, 226 |
| Cac8I | GCNNGC | 3 cut(s) | 39, 176, 211 |
| CfoI | GCGC | 3 cut(s) | 39, 41, 287 |
| Csp6I | GTAC | 1 cut(s) | 307 |
| CviAII | CATG | 1 cut(s) | 102 |
| CviJI | RGCY | 6 cut(s) | 8, 154, 174, 195, 226, 239 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 154, 174, 195, 226, 239 |
| CviQI | GTAC | 1 cut(s) | 307 |
| Eam1104I | CTCTTC | 1 cut(s) | 157 |
| EarI | CTCTTC | 1 cut(s) | 157 |
| Ecl136II | GAGCTC | 1 cut(s) | 174 |
| Eco24I | GRGCYC | 1 cut(s) | 176 |
| Eco53kI | GAGCTC | 1 cut(s) | 174 |
| Eco57I | CTGAAG | 1 cut(s) | 273 |
| EcoICRI | GAGCTC | 1 cut(s) | 174 |
| EcoT38I | GRGCYC | 1 cut(s) | 176 |
| Esp3I | CGTCTC | 1 cut(s) | 223 |
| FaeI | CATG | 1 cut(s) | 105 |
| FaiI | YATR | 2 cut(s) | 103, 322 |
| FatI | CATG | 1 cut(s) | 101 |
| Fnu4HI | GCNGC | 4 cut(s) | 54, 204, 207, 240 |
| FriOI | GRGCYC | 1 cut(s) | 176 |
| Fsp4HI | GCNGC | 4 cut(s) | 54, 204, 207, 240 |
| FspBI | CTAG | 1 cut(s) | 236 |
| GlaI | GCGC | 3 cut(s) | 38, 40, 286 |
| GluI | GCNGC | 4 cut(s) | 54, 204, 207, 240 |
| HapII | CCGG | 1 cut(s) | 18 |
| HhaI | GCGC | 3 cut(s) | 39, 41, 287 |
| Hin1II | CATG | 1 cut(s) | 105 |
| Hin6I | GCGC | 3 cut(s) | 37, 39, 285 |
| HinP1I | GCGC | 3 cut(s) | 37, 39, 285 |
| HpaII | CCGG | 1 cut(s) | 18 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 93 |
| HpyAV | CCTTC | 2 cut(s) | 120, 248 |
| HpyCH4V | TGCA | 1 cut(s) | 48 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 45 |
| Hsp92II | CATG | 1 cut(s) | 105 |
| HspAI | GCGC | 3 cut(s) | 37, 39, 285 |
| LmnI | GCTCC | 3 cut(s) | 125, 200, 231 |
| LpnPI | CCDG | 1 cut(s) | 31 |
| Lsp1109I | GCAGC | 4 cut(s) | 65, 190, 193, 226 |
| MaeI | CTAG | 1 cut(s) | 236 |
| MaeIII | GTNAC | 2 cut(s) | 257, 316 |
| MboII | GAAGA | 2 cut(s) | 33, 174 |
| MhlI | GDGCHC | 1 cut(s) | 176 |
| MluCI | AATT | 4 cut(s) | 30, 87, 124, 167 |
| MnlI | CCTC | 8 cut(s) | 116, 144, 197, 224, 253, 256, 259, 280 |
| MspI | CCGG | 1 cut(s) | 18 |
| MvnI | CGCG | 1 cut(s) | 39 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 45 |
| NlaIII | CATG | 1 cut(s) | 105 |
| NmuCI | GTSAC | 1 cut(s) | 257 |
| NspI | RCATGY | 1 cut(s) | 105 |
| PauI | GCGCGC | 1 cut(s) | 37 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 157 |
| PkrI | GCNGC | 4 cut(s) | 55, 205, 208, 241 |
| Psp124BI | GAGCTC | 1 cut(s) | 176 |
| PteI | GCGCGC | 1 cut(s) | 37 |
| RsaI | GTAC | 1 cut(s) | 308 |
| RsaNI | GTAC | 1 cut(s) | 307 |
| SacI | GAGCTC | 1 cut(s) | 176 |
| SatI | GCNGC | 4 cut(s) | 54, 204, 207, 240 |
| SduI | GDGCHC | 1 cut(s) | 176 |
| SetI | ASST | 6 cut(s) | 10, 176, 197, 228, 241, 259 |
| Sse9I | AATT | 4 cut(s) | 30, 87, 124, 167 |
| SspI | AATATT | 1 cut(s) | 313 |
| SspMI | CTAG | 1 cut(s) | 236 |
| SstI | GAGCTC | 1 cut(s) | 176 |
| TaqI | TCGA | 1 cut(s) | 292 |
| TasI | AATT | 4 cut(s) | 30, 87, 124, 167 |
| TatI | WGTACW | 1 cut(s) | 306 |
| TseFI | GTSAC | 1 cut(s) | 257 |
| TseI | GCWGC | 4 cut(s) | 53, 203, 206, 239 |
| Tsp45I | GTSAC | 1 cut(s) | 257 |
| XapI | RAATTY | 1 cut(s) | 87 |
| XceI | RCATGY | 1 cut(s) | 105 |
| XspI | CTAG | 1 cut(s) | 236 |