Prupe.6G123300_v2.0.a1

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
9195301 .. 9197296
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G123300.1

Sequence Viewer

Length: 462 bp
ATGTCTGGGAAGGAACTTGGCCAAGAGCTCAAGGAACTCGTCAGCTCCTTGCAAGACCAAGGAATTTTGGACGAGCAATTTGATCAAATGAAAGCAGTTCAGAATGAACAAAATCCTTGCTTTGTTGTGAATTTGATCACCACATTCCTTGGTGATGCTGAAAATATTTTGGCACAACTCAGGACATATCTGAGTGCTGAGGATCCTGATGAAGTCAACTATCACCAGGTGGCAACTCTTGCCCTCACGCTCAAGGGAAGTAGCTCAAGTGTTGGTGGTTGCCGGATGGCGTTAGCCTGTAGCCAGCTCCGAGATGTAAGCGATGTAAATGACCACGAAGGGTGCATTATTGTTCTTGACCTTGTTAACCAACAGTTTCTCATCTTGCGGGAGAATCTGAATCACATTGTTCAGATGGAACTCGCAATCCATGAAAAAGAGGTCAAAAGGCGCAATATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

154

Amino Acids

17.13

Weight (kDa)

4.64

Isoelectric Point (pI)

48.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 388
AclWI GGATC 2 cut(s) 197, 210
AcoI YGGCCR 1 cut(s) 19
AcsI RAATTY 2 cut(s) 63, 130
AdeI CACNNNGTG 1 cut(s) 229
AjnI CCWGG 1 cut(s) 225
AloI GAACNNNNNNTCC 2 cut(s) 411, 443
AluBI AGCT 4 cut(s) 28, 45, 264, 307
AluI AGCT 4 cut(s) 28, 45, 264, 307
Alw21I GWGCWC 1 cut(s) 30
AlwI GGATC 2 cut(s) 197, 210
AoxI GGCC 1 cut(s) 19
ApoI RAATTY 2 cut(s) 63, 130
ArsI GACNNNNNNTTYG 2 cut(s) 62, 94
AspLEI GCGC 1 cut(s) 453
AsuHPI GGTGA 3 cut(s) 130, 164, 215
BalI TGGCCA 1 cut(s) 21
BamHI GGATCC 1 cut(s) 202
BanII GRGCYC 1 cut(s) 30
Bbv12I GWGCWC 1 cut(s) 30
BbvCI CCTCAGC 1 cut(s) 198
BccI CCATC 2 cut(s) 280, 409
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 2 cut(s) 82, 135
BfmI CTRYAG 1 cut(s) 298
Bme1390I CCNGG 1 cut(s) 227
BmiI GGNNCC 1 cut(s) 204
BmrFI CCNGG 1 cut(s) 227
BmsI GCATC 1 cut(s) 145
Bpu10I CCTNAGC 1 cut(s) 198
BpuEI CTTGAG 3 cut(s) 14, 236, 250
BsaJI CCNNGG 2 cut(s) 58, 148
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 2 cut(s) 58, 148
BseGI GGATG 1 cut(s) 291
BseMII CTCAG 3 cut(s) 182, 189, 193
BshFI GGCC 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 30
BsiSI CCGG 1 cut(s) 283
BsnI GGCC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 30
Bsp143I GATC 3 cut(s) 82, 135, 202
BspACI CCGC 1 cut(s) 388
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 3 cut(s) 183, 190, 192
BspLI GGNNCC 1 cut(s) 204
BspPI GGATC 2 cut(s) 197, 210
BssECI CCNNGG 2 cut(s) 58, 148
BssMI GATC 3 cut(s) 82, 135, 202
BssT1I CCWWGG 2 cut(s) 58, 148
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 1 cut(s) 375
BstAPI GCANNNNNTGC 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 305
BstDEI CTNAG 3 cut(s) 179, 191, 198
BstF5I GGATG 1 cut(s) 291
BstHHI GCGC 1 cut(s) 453
BstKTI GATC 3 cut(s) 85, 138, 205
BstMBI GATC 3 cut(s) 82, 135, 202
BstMWI GCNNNNNNNGC 1 cut(s) 239
BstNI CCWGG 1 cut(s) 227
BstSCI CCNGG 1 cut(s) 225
BstSFI CTRYAG 1 cut(s) 298
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BsuRI GGCC 1 cut(s) 21
BtgZI GCGATG 1 cut(s) 336
BtsCI GGATG 1 cut(s) 291
Cac8I GCNNGC 1 cut(s) 305
CfoI GCGC 1 cut(s) 453
CsiI ACCWGGT 1 cut(s) 225
CspCI CAANNNNNGTGG 2 cut(s) 130, 165
CviAII CATG 1 cut(s) 431
CviJI RGCY 7 cut(s) 21, 28, 45, 264, 296, 303, 307
CviKI_1 RGCY 7 cut(s) 21, 28, 45, 264, 296, 303, 307
DdeI CTNAG 3 cut(s) 179, 191, 198
DpnI GATC 3 cut(s) 84, 137, 204
DpnII GATC 3 cut(s) 82, 135, 202
DraIII CACNNNGTG 1 cut(s) 229
EaeI YGGCCR 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 28
Eco130I CCWWGG 2 cut(s) 58, 148
Eco24I GRGCYC 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 28
EcoICRI GAGCTC 1 cut(s) 28
EcoRII CCWGG 1 cut(s) 225
EcoT14I CCWWGG 2 cut(s) 58, 148
EcoT38I GRGCYC 1 cut(s) 30
ErhI CCWWGG 2 cut(s) 58, 148
FaeI CATG 1 cut(s) 434
FaiI YATR 3 cut(s) 187, 432, 458
FatI CATG 1 cut(s) 430
FauI CCCGC 1 cut(s) 381
FbaI TGATCA 2 cut(s) 82, 135
FokI GGATG 1 cut(s) 298
FriOI GRGCYC 1 cut(s) 30
GlaI GCGC 1 cut(s) 452
HaeIII GGCC 1 cut(s) 21
HapII CCGG 1 cut(s) 283
HhaI GCGC 1 cut(s) 453
Hin1II CATG 1 cut(s) 434
Hin6I GCGC 1 cut(s) 451
HinP1I GCGC 1 cut(s) 451
HincII GTYRAC 2 cut(s) 217, 367
HindII GTYRAC 2 cut(s) 217, 367
HinfI GANTC 2 cut(s) 394, 400
HpaI GTTAAC 1 cut(s) 367
HpaII CCGG 1 cut(s) 283
HphI GGTGA 3 cut(s) 130, 164, 215
Hpy166II GTNNAC 2 cut(s) 217, 367
Hpy188I TCNGA 5 cut(s) 102, 192, 311, 399, 414
Hpy188III TCNNGA 3 cut(s) 181, 206, 356
Hpy8I GTNNAC 2 cut(s) 217, 367
HpyAV CCTTC 2 cut(s) 4, 332
HpyCH4III ACNGT 1 cut(s) 375
HpyCH4V TGCA 2 cut(s) 52, 345
HpyF10VI GCNNNNNNNGC 1 cut(s) 239
HpyF3I CTNAG 3 cut(s) 179, 191, 198
Hsp92II CATG 1 cut(s) 434
HspAI GCGC 1 cut(s) 451
Ksp22I TGATCA 2 cut(s) 82, 135
KspAI GTTAAC 1 cut(s) 367
Kzo9I GATC 3 cut(s) 82, 135, 202
LmnI GCTCC 2 cut(s) 50, 312
LpnPI CCDG 7 cut(s) 166, 212, 219, 239, 296, 310, 317
LweI GCATC 1 cut(s) 145
MabI ACCWGGT 1 cut(s) 225
MalI GATC 3 cut(s) 84, 137, 204
MboI GATC 3 cut(s) 82, 135, 202
MflI RGATCY 1 cut(s) 202
MhlI GDGCHC 1 cut(s) 30
MlsI TGGCCA 1 cut(s) 21
MluCI AATT 3 cut(s) 63, 77, 130
MluNI TGGCCA 1 cut(s) 21
MnlI CCTC 3 cut(s) 193, 254, 433
Mox20I TGGCCA 1 cut(s) 21
MscI TGGCCA 1 cut(s) 21
MseI TTAA 1 cut(s) 366
Msp20I TGGCCA 1 cut(s) 21
MspI CCGG 1 cut(s) 283
MspR9I CCNGG 1 cut(s) 227
MvaI CCWGG 1 cut(s) 227
MwoI GCNNNNNNNGC 1 cut(s) 239
NdeII GATC 3 cut(s) 82, 135, 202
NlaIII CATG 1 cut(s) 434
NlaIV GGNNCC 1 cut(s) 204
PfeI GAWTC 2 cut(s) 394, 400
Psp124BI GAGCTC 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 225
PspGI CCWGG 1 cut(s) 225
PspN4I GGNNCC 1 cut(s) 204
PsuI RGATCY 1 cut(s) 202
SacI GAGCTC 1 cut(s) 30
SaqAI TTAA 1 cut(s) 366
Sau3AI GATC 3 cut(s) 82, 135, 202
ScrFI CCNGG 1 cut(s) 227
SduI GDGCHC 1 cut(s) 30
SetI ASST 7 cut(s) 30, 47, 231, 266, 309, 363, 444
SexAI ACCWGGT 1 cut(s) 225
SfaNI GCATC 1 cut(s) 145
SfcI CTRYAG 1 cut(s) 298
SmlI CTYRAG 3 cut(s) 29, 251, 265
SmoI CTYRAG 3 cut(s) 29, 251, 265
Sse9I AATT 3 cut(s) 63, 77, 130
SsiI CCGC 1 cut(s) 388
SspI AATATT 1 cut(s) 166
SstI GAGCTC 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 225
StyI CCWWGG 2 cut(s) 58, 148
TaaI ACNGT 1 cut(s) 375
TasI AATT 3 cut(s) 63, 77, 130
TfiI GAWTC 2 cut(s) 394, 400
Tru1I TTAA 1 cut(s) 366
Tru9I TTAA 1 cut(s) 366
TspDTI ATGAA 4 cut(s) 104, 120, 225, 447
XapI RAATTY 2 cut(s) 63, 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.