protein histidine kinase binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g33681 |
| malus_domestica | MD11G1160500.v1.1 |
| prunus_persica | Prupe.6G123100_v2.0.a1 Prupe.6G123100_v2.0.a1 Prupe.6G123200_v2.0.a1 Prupe.6G123300_v2.0.a1 Prupe.6G123400_v2.0.a1 Prupe.6G123600_v2.0.a1 Prupe.6G123700_v2.0.a1 |
| pyrus_communis | pycom11g13100 |
| rosa_chinensis | RchiOBHm_Chr5g0061201 |
| rosa_laevigata | RLG00000035439 RLG00000035440 |
| rosa_multiflora | Rmu_sc0001366.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00019510 |
| rosa_rugosa | Rorug05G0338600 |
| rosa_samantha | Rh5AG399400 Rh5BG412600 Rh5CG437300 Rh5DG426900 |
| rosa_wichuraiana | Rw5G037680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 233 |
| AclWI | GGATC | 1 cut(s) | 21 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 263 |
| AjnI | CCWGG | 2 cut(s) | 57, 215 |
| AluBI | AGCT | 3 cut(s) | 28, 45, 173 |
| AluI | AGCT | 3 cut(s) | 28, 45, 173 |
| AlwI | GGATC | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 3 |
| AsuHPI | GGTGA | 2 cut(s) | 172, 232 |
| BciT130I | CCWGG | 2 cut(s) | 59, 217 |
| BfmI | CTRYAG | 1 cut(s) | 201 |
| Bme1390I | CCNGG | 2 cut(s) | 59, 217 |
| BmrFI | CCNGG | 2 cut(s) | 59, 217 |
| BsaJI | CCNNGG | 4 cut(s) | 58, 148, 215, 216 |
| BseBI | CCWGG | 2 cut(s) | 59, 217 |
| BseDI | CCNNGG | 4 cut(s) | 58, 148, 215, 216 |
| BseGI | GGATG | 1 cut(s) | 76 |
| BseMII | CTCAG | 1 cut(s) | 182 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiSI | CCGG | 1 cut(s) | 6 |
| BsmI | GAATGC | 1 cut(s) | 63 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 13 |
| BspACI | CCGC | 1 cut(s) | 233 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 183 |
| BspMAI | CTGCAG | 1 cut(s) | 205 |
| BspPI | GGATC | 1 cut(s) | 21 |
| BssECI | CCNNGG | 4 cut(s) | 58, 148, 215, 216 |
| BssMI | GATC | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 148 |
| Bst2UI | CCWGG | 2 cut(s) | 59, 217 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| BstC8I | GCNNGC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 191 |
| BstF5I | GGATG | 1 cut(s) | 76 |
| BstKTI | GATC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 13 |
| BstNI | CCWGG | 2 cut(s) | 59, 217 |
| BstSCI | CCNGG | 2 cut(s) | 57, 215 |
| BstSFI | CTRYAG | 1 cut(s) | 201 |
| BstX2I | RGATCY | 1 cut(s) | 13 |
| BstYI | RGATCY | 1 cut(s) | 13 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 76 |
| BtsI | GCAGTG | 1 cut(s) | 210 |
| BtsIMutI | CAGTG | 1 cut(s) | 210 |
| Cac8I | GCNNGC | 1 cut(s) | 201 |
| CviAII | CATG | 1 cut(s) | 256 |
| CviJI | RGCY | 5 cut(s) | 5, 28, 45, 173, 199 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 28, 45, 173, 199 |
| DdeI | CTNAG | 1 cut(s) | 191 |
| DpnI | GATC | 1 cut(s) | 15 |
| DpnII | GATC | 1 cut(s) | 13 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 148 |
| Eco57I | CTGAAG | 1 cut(s) | 263 |
| EcoRII | CCWGG | 2 cut(s) | 57, 215 |
| EcoT14I | CCWWGG | 1 cut(s) | 148 |
| ErhI | CCWWGG | 1 cut(s) | 148 |
| FaeI | CATG | 1 cut(s) | 259 |
| FaiI | YATR | 2 cut(s) | 137, 257 |
| FatI | CATG | 1 cut(s) | 255 |
| FokI | GGATG | 1 cut(s) | 83 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 6 |
| Hin1II | CATG | 1 cut(s) | 259 |
| HpaII | CCGG | 1 cut(s) | 6 |
| HphI | GGTGA | 2 cut(s) | 172, 232 |
| Hpy166II | GTNNAC | 2 cut(s) | 116, 208 |
| Hpy188I | TCNGA | 1 cut(s) | 192 |
| Hpy188III | TCNNGA | 1 cut(s) | 68 |
| Hpy8I | GTNNAC | 2 cut(s) | 116, 208 |
| HpyAV | CCTTC | 1 cut(s) | 238 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 203 |
| HpyF3I | CTNAG | 1 cut(s) | 191 |
| Hsp92II | CATG | 1 cut(s) | 259 |
| Kzo9I | GATC | 1 cut(s) | 13 |
| LmnI | GCTCC | 2 cut(s) | 50, 155 |
| LpnPI | CCDG | 8 cut(s) | 19, 35, 44, 53, 71, 202, 213, 229 |
| MaeIII | GTNAC | 3 cut(s) | 96, 124, 220 |
| MalI | GATC | 1 cut(s) | 15 |
| MboI | GATC | 1 cut(s) | 13 |
| MflI | RGATCY | 1 cut(s) | 13 |
| MnlI | CCTC | 1 cut(s) | 252 |
| MspI | CCGG | 1 cut(s) | 6 |
| MspR9I | CCNGG | 2 cut(s) | 59, 217 |
| Mva1269I | GAATGC | 1 cut(s) | 63 |
| MvaI | CCWGG | 2 cut(s) | 59, 217 |
| NdeII | GATC | 1 cut(s) | 13 |
| NlaIII | CATG | 1 cut(s) | 259 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| PasI | CCCWGGG | 1 cut(s) | 216 |
| PctI | GAATGC | 1 cut(s) | 63 |
| Psp6I | CCWGG | 2 cut(s) | 57, 215 |
| PspGI | CCWGG | 2 cut(s) | 57, 215 |
| PstI | CTGCAG | 1 cut(s) | 205 |
| PsuI | RGATCY | 1 cut(s) | 13 |
| Sau3AI | GATC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 2 cut(s) | 59, 217 |
| SetI | ASST | 5 cut(s) | 30, 47, 150, 175, 263 |
| SfcI | CTRYAG | 1 cut(s) | 201 |
| SsiI | CCGC | 1 cut(s) | 233 |
| StyD4I | CCNGG | 2 cut(s) | 57, 215 |
| StyI | CCWWGG | 1 cut(s) | 148 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspDTI | ATGAA | 3 cut(s) | 48, 99, 120 |
| TspRI | CASTG | 1 cut(s) | 210 |