Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0015196

Physical Location & Seq

Genomic Coordinates Forward (+)

10455479 .. 10456951

Gene Structure 1473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G132800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGAATATGTCTAGCACAGCTGCAGTGGCAGTAGTAGCAATTGGGCTCGTATTTTTGACCTTCGCGGGCCAGTGCTCCGGTGCTCTGGAGGTAGGATTCTACCAGGGAAAATGCGGCCGGTTTGTAGATGTTGAAGGTATTGTAGCCGGCATAGTCAGGACAAAATTTTTCAGGGATCGGACAATTGCTGCTGCCCTCATCCGCATGCAGTTTCACGATTGCTTTGTCAATGGATGTGATGCATCCATTCTATTAGATGGAAGCGCCAGCGAGAAAACTGCTCCTCCAAATCTAAGCGTACGGGGTTTTGATGTCATTGACGCTGCAAAGACTGCCGTGGAAAGTGTATGCCGGGGAGTTGTCTCTTGTGCTGATATCATTGCCATTGCTACCAGAGAAGCTGTTTATTTGAGCGGAGGAGGGCGATACAATGTTCAAACAGGGAGAAGGGATGGCTTGATATCCCTTGCAGCAAATGTTGACCTCCCAGCTCCCTCAATATCAGTGCCTGATTCAGTTGCAGCATTTGCTAGAAAAGGACTCAATATGACTGATATGGTTCATCTTCTTGATCGGCTTTACAATTTCCAGAACACTGGAAAACCTGACCCCGATATGAATGTAGCGTTACTAGGACGGCTGAGACGTATCTGCCCTCAAAACTCAGCAGGCACCAATACTACTAATTTGGACCAGAACCCTCAAAGTTCGTTTATTGTCGATAACTCGTTCTACAAGGAGATAGTAGCCCGTAGAGGAATTCTTCAAATTGACCAAGAGCTAGCTTTGGACCCCACAACTCAGGCCACAGTGACCGCCTTAGCGAATAGCGGTACTAACAGCTTCGCCACTAAATTCGGACAGGCCATGGTTAAGTTGGGAGCAGTTGAAGTCCTTACTGGCTCACAAGGGGAGATTAGGAGATCATGCCGGGCAGTTAATAAACCTGGTTTTTTAACTTTTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

323

Amino Acids

34.27

Weight (kDa)

8.42

Isoelectric Point (pI)

28.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22410
fragaria_vesca	FvH4_3g25270
malus_domestica	MD03G1147900.v1.1
prunus_persica	Prupe.6G132800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0046861
rosa_laevigata	RLG00000034451
rosa_multiflora	Rmu_sc0002264.1_g000029
rosa_roxburghii	Rroxscaffold_1G00034520
rosa_rugosa	Rorug05G0232300
rosa_samantha	Rh1BG405200 Rh1DG435700 Rh5AG311600 Rh5BG320600 Rh5CG346700 Rh5DG331300
rosa_wichuraiana	Rw5G029120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	671
AccBSI	CCGCTC	1 cut(s)	414
AccII	CGCG	1 cut(s)	65
AciI	CCGC	6 cut(s)	65, 114, 202, 414, 816, 831
AclWI	GGATC	1 cut(s)	183
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	3 cut(s)	164, 759, 854
AfaI	GTAC	2 cut(s)	300, 835
AgsI	TTSAA	4 cut(s)	134, 437, 767, 890
AjnI	CCWGG	2 cut(s)	102, 946
AluBI	AGCT	6 cut(s)	20, 401, 491, 781, 785, 843
AluI	AGCT	6 cut(s)	20, 401, 491, 781, 785, 843
Alw21I	GWGCWC	2 cut(s)	77, 85
Alw26I	GTCTC	2 cut(s)	367, 637
AlwI	GGATC	1 cut(s)	183
AlwNI	CAGNNNCTG	1 cut(s)	509
AoxI	GGCC	4 cut(s)	67, 115, 804, 864
ApeKI	GCWGC	6 cut(s)	20, 188, 191, 323, 470, 521
ApoI	RAATTY	3 cut(s)	164, 759, 854
AspLEI	GCGC	1 cut(s)	266
AspS9I	GGNCC	3 cut(s)	67, 691, 790
AsuC2I	CCSGG	2 cut(s)	353, 932
AsuNHI	GCTAGC	1 cut(s)	781
AvaII	GGWCC	2 cut(s)	691, 790
BanI	GGYRCC	1 cut(s)	671
BanII	GRGCYC	1 cut(s)	48
Bbv12I	GWGCWC	2 cut(s)	77, 85
BbvI	GCAGC	6 cut(s)	7, 175, 178, 310, 482, 533
BccI	CCATC	2 cut(s)	251, 446
BceAI	ACGGC	2 cut(s)	320, 653
BcgI	CGANNNNNNTGC	2 cut(s)	260, 294
BciT130I	CCWGG	2 cut(s)	104, 948
BcnI	CCSGG	2 cut(s)	353, 932
BcoDI	GTCTC	2 cut(s)	367, 637
BfaI	CTAG	4 cut(s)	12, 531, 632, 782
BfmI	CTRYAG	1 cut(s)	21
BfoI	RGCGCY	1 cut(s)	267
BisI	GCNGC	7 cut(s)	21, 115, 189, 192, 324, 471, 522
BlsI	GCNGC	7 cut(s)	22, 116, 190, 193, 325, 472, 523
Bme1390I	CCNGG	4 cut(s)	104, 353, 932, 948
Bme18I	GGWCC	2 cut(s)	691, 790
BmgT120I	GGNCC	3 cut(s)	67, 691, 790
BmiI	GGNNCC	2 cut(s)	673, 792
BmrFI	CCNGG	4 cut(s)	104, 353, 932, 948
BmsI	GCATC	2 cut(s)	229, 251
BmtI	GCTAGC	1 cut(s)	785
BpmI	CTGGAG	1 cut(s)	107
Bpu10I	CCTNAGC	1 cut(s)	820
BpuMI	CCSGG	2 cut(s)	353, 932
BsaJI	CCNNGG	4 cut(s)	103, 336, 352, 867
BsaWI	WCCGGW	1 cut(s)	77
BsaXI	ACNNNNNCTCC	2 cut(s)	268, 298
Bse118I	RCCGGY	2 cut(s)	117, 146
Bse1I	ACTGG	3 cut(s)	70, 601, 904
Bse3DI	GCAATG	2 cut(s)	378, 384
BseBI	CCWGG	2 cut(s)	104, 948
BseDI	CCNNGG	4 cut(s)	103, 336, 352, 867
BseGI	GGATG	4 cut(s)	198, 239, 242, 457
BseMI	GCAATG	2 cut(s)	378, 384
BseMII	CTCAG	3 cut(s)	632, 678, 815
BseNI	ACTGG	3 cut(s)	70, 601, 904
BseRI	GAGGAG	2 cut(s)	273, 432
BseX3I	CGGCCG	1 cut(s)	115
BseXI	GCAGC	6 cut(s)	7, 175, 178, 310, 482, 533
BseYI	CCCAGC	1 cut(s)	487
Bsh1236I	CGCG	1 cut(s)	65
Bsh1285I	CGRYCG	1 cut(s)	118
BshFI	GGCC	4 cut(s)	69, 117, 806, 866
BshNI	GGYRCC	1 cut(s)	671
BsiEI	CGRYCG	1 cut(s)	118
BsiHKAI	GWGCWC	2 cut(s)	77, 85
BsiSI	CCGG	5 cut(s)	78, 118, 147, 352, 931
BsiWI	CGTACG	1 cut(s)	298
BsmAI	GTCTC	2 cut(s)	367, 637
BsmBI	CGTCTC	1 cut(s)	637
BsnI	GGCC	4 cut(s)	69, 117, 806, 866
Bsp1286I	GDGCHC	3 cut(s)	48, 77, 85
Bsp143I	GATC	3 cut(s)	175, 571, 923
Bsp19I	CCATGG	1 cut(s)	867
BspACI	CCGC	6 cut(s)	65, 114, 202, 414, 816, 831
BspANI	GGCC	4 cut(s)	69, 117, 806, 866
BspCNI	CTCAG	3 cut(s)	633, 677, 814
BspFNI	CGCG	1 cut(s)	65
BspLI	GGNNCC	2 cut(s)	673, 792
BspMAI	CTGCAG	1 cut(s)	25
BspOI	GCTAGC	1 cut(s)	785
BspPI	GGATC	1 cut(s)	183
BspT107I	GGYRCC	1 cut(s)	671
BsrBI	CCGCTC	1 cut(s)	414
BsrDI	GCAATG	2 cut(s)	378, 384
BsrFI	RCCGGY	2 cut(s)	117, 146
BsrI	ACTGG	3 cut(s)	70, 601, 904
BssAI	RCCGGY	2 cut(s)	117, 146
BssECI	CCNNGG	4 cut(s)	103, 336, 352, 867
BssMI	GATC	3 cut(s)	175, 571, 923
BssT1I	CCWWGG	1 cut(s)	867
Bst2UI	CCWGG	2 cut(s)	104, 948
Bst4CI	ACNGT	1 cut(s)	811
BstAPI	GCANNNNNTGC	2 cut(s)	332, 527
BstC8I	GCNNGC	6 cut(s)	67, 148, 206, 268, 670, 783
BstDEI	CTNAG	5 cut(s)	293, 641, 664, 801, 820
BstDSI	CCRYGG	2 cut(s)	336, 867
BstF5I	GGATG	4 cut(s)	198, 239, 242, 457
BstFNI	CGCG	1 cut(s)	65
BstH2I	RGCGCY	1 cut(s)	267
BstHHI	GCGC	1 cut(s)	266
BstKTI	GATC	3 cut(s)	178, 574, 926
BstMAI	GTCTC	2 cut(s)	367, 637
BstMBI	GATC	3 cut(s)	175, 571, 923
BstMCI	CGRYCG	1 cut(s)	118
BstMWI	GCNNNNNNNGC	4 cut(s)	26, 35, 332, 527
BstNI	CCWGG	2 cut(s)	104, 948
BstNSI	RCATGY	1 cut(s)	208
BstSCI	CCNGG	4 cut(s)	102, 351, 930, 946
BstSFI	CTRYAG	1 cut(s)	21
BstUI	CGCG	1 cut(s)	65
BstV1I	GCAGC	6 cut(s)	7, 175, 178, 310, 482, 533
BstXI	CCANNNNNNTGG	1 cut(s)	596
BstZI	CGGCCG	1 cut(s)	115
BsuRI	GGCC	4 cut(s)	69, 117, 806, 866
BtgI	CCRYGG	2 cut(s)	336, 867
BtsCI	GGATG	4 cut(s)	198, 239, 242, 457
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	5 cut(s)	30, 77, 510, 594, 816
Cac8I	GCNNGC	6 cut(s)	67, 148, 206, 268, 670, 783
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	1 cut(s)	266
Cfr10I	RCCGGY	2 cut(s)	117, 146
Cfr13I	GGNCC	3 cut(s)	67, 691, 790
CseI	GACGC	1 cut(s)	329
CsiI	ACCWGGT	1 cut(s)	946
Csp6I	GTAC	2 cut(s)	299, 834
CviAII	CATG	3 cut(s)	205, 868, 927
CviQI	GTAC	2 cut(s)	299, 834
DdeI	CTNAG	5 cut(s)	293, 641, 664, 801, 820
DpnI	GATC	3 cut(s)	177, 573, 925
DpnII	GATC	3 cut(s)	175, 571, 923
EaeI	YGGCCR	1 cut(s)	115
EagI	CGGCCG	1 cut(s)	115
EclXI	CGGCCG	1 cut(s)	115
Eco130I	CCWWGG	1 cut(s)	867
Eco24I	GRGCYC	1 cut(s)	48
Eco32I	GATATC	2 cut(s)	376, 462
Eco47I	GGWCC	2 cut(s)	691, 790
Eco52I	CGGCCG	1 cut(s)	115
EcoRI	GAATTC	1 cut(s)	759
EcoRII	CCWGG	2 cut(s)	102, 946
EcoRV	GATATC	2 cut(s)	376, 462
EcoT14I	CCWWGG	1 cut(s)	867
EcoT22I	ATGCAT	1 cut(s)	244
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	1 cut(s)	867
Esp3I	CGTCTC	1 cut(s)	637
FaeI	CATG	3 cut(s)	208, 871, 930
FaiI	YATR	9 cut(s)	8, 152, 206, 349, 548, 557, 617, 869, 928
FatI	CATG	3 cut(s)	204, 867, 926
FauI	CCCGC	1 cut(s)	58
Fnu4HI	GCNGC	7 cut(s)	21, 115, 189, 192, 324, 471, 522
FokI	GGATG	4 cut(s)	185, 229, 246, 464
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	7 cut(s)	21, 115, 189, 192, 324, 471, 522
FspBI	CTAG	4 cut(s)	12, 531, 632, 782
GlaI	GCGC	1 cut(s)	265
GluI	GCNGC	7 cut(s)	21, 115, 189, 192, 324, 471, 522
GsaI	CCCAGC	1 cut(s)	491
GsuI	CTGGAG	1 cut(s)	107
HaeII	RGCGCY	1 cut(s)	267
HaeIII	GGCC	4 cut(s)	69, 117, 806, 866
HapII	CCGG	5 cut(s)	78, 118, 147, 352, 931
HgaI	GACGC	1 cut(s)	329
HhaI	GCGC	1 cut(s)	266
Hin1II	CATG	3 cut(s)	208, 871, 930
Hin6I	GCGC	1 cut(s)	264
HinP1I	GCGC	1 cut(s)	264
HincII	GTYRAC	1 cut(s)	481
HindII	GTYRAC	1 cut(s)	481
HinfI	GANTC	3 cut(s)	96, 512, 540
HpaII	CCGG	5 cut(s)	78, 118, 147, 352, 931
Hpy166II	GTNNAC	1 cut(s)	481
Hpy188I	TCNGA	2 cut(s)	180, 860
Hpy188III	TCNNGA	5 cut(s)	86, 157, 215, 569, 589
Hpy8I	GTNNAC	1 cut(s)	481
HpyAV	CCTTC	3 cut(s)	70, 128, 441
HpyCH4III	ACNGT	1 cut(s)	811
HpyCH4IV	ACGT	1 cut(s)	646
HpyCH4V	TGCA	6 cut(s)	23, 208, 242, 326, 470, 521
HpyF10VI	GCNNNNNNNGC	4 cut(s)	26, 35, 332, 527
HpyF3I	CTNAG	5 cut(s)	293, 641, 664, 801, 820
HpySE526I	ACGT	1 cut(s)	646
Hsp92II	CATG	3 cut(s)	208, 871, 930
HspAI	GCGC	1 cut(s)	264
KroI	GCCGGC	1 cut(s)	146
KroNI	GCCGGC	1 cut(s)	148
Kzo9I	GATC	3 cut(s)	175, 571, 923
LmnI	GCTCC	4 cut(s)	80, 286, 496, 881
Lsp1109I	GCAGC	6 cut(s)	7, 175, 178, 310, 482, 533
LweI	GCATC	2 cut(s)	229, 251
MabI	ACCWGGT	1 cut(s)	946
MaeI	CTAG	4 cut(s)	12, 531, 632, 782
MaeII	ACGT	1 cut(s)	646
MaeIII	GTNAC	2 cut(s)	627, 811
MalI	GATC	3 cut(s)	177, 573, 925
MbiI	CCGCTC	1 cut(s)	414
MboI	GATC	3 cut(s)	175, 571, 923
MboII	GAAGA	2 cut(s)	557, 755
MfeI	CAATTG	2 cut(s)	39, 183
MhlI	GDGCHC	3 cut(s)	48, 77, 85
MluCI	AATT	9 cut(s)	39, 164, 183, 583, 685, 759, 768, 854, 964
MlyI	GAGTC	1 cut(s)	534
Mph1103I	ATGCAT	1 cut(s)	244
MroNI	GCCGGC	1 cut(s)	146
MseI	TTAA	4 cut(s)	873, 939, 956, 963
MslI	CAYNNNNRTG	1 cut(s)	203
MspA1I	CMGCKG	1 cut(s)	20
MspI	CCGG	5 cut(s)	78, 118, 147, 352, 931
MspR9I	CCNGG	4 cut(s)	104, 353, 932, 948
MunI	CAATTG	2 cut(s)	39, 183
MvaI	CCWGG	2 cut(s)	104, 948
MvnI	CGCG	1 cut(s)	65
MwoI	GCNNNNNNNGC	4 cut(s)	26, 35, 332, 527
NaeI	GCCGGC	1 cut(s)	148
NciI	CCSGG	2 cut(s)	353, 932
NcoI	CCATGG	1 cut(s)	867
NdeII	GATC	3 cut(s)	175, 571, 923
NgoMIV	GCCGGC	1 cut(s)	146
NheI	GCTAGC	1 cut(s)	781
NlaIII	CATG	3 cut(s)	208, 871, 930
NlaIV	GGNNCC	2 cut(s)	673, 792
NmuCI	GTSAC	1 cut(s)	811
NsiI	ATGCAT	1 cut(s)	244
NspI	RCATGY	1 cut(s)	208
PaeI	GCATGC	1 cut(s)	208
PcsI	WCGNNNNNNNCGW	1 cut(s)	643
PdiI	GCCGGC	1 cut(s)	148
PfeI	GAWTC	2 cut(s)	96, 512
Pfl23II	CGTACG	1 cut(s)	298
PkrI	GCNGC	7 cut(s)	22, 116, 190, 193, 325, 472, 523
PleI	GAGTC	1 cut(s)	534
PpsI	GAGTC	1 cut(s)	534
Psp6I	CCWGG	2 cut(s)	102, 946
PspFI	CCCAGC	1 cut(s)	487
PspGI	CCWGG	2 cut(s)	102, 946
PspLI	CGTACG	1 cut(s)	298
PspN4I	GGNNCC	2 cut(s)	673, 792
PspPI	GGNCC	3 cut(s)	67, 691, 790
PstI	CTGCAG	1 cut(s)	25
PstNI	CAGNNNCTG	1 cut(s)	509
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	2 cut(s)	300, 835
RsaNI	GTAC	2 cut(s)	299, 834
RseI	CAYNNNNRTG	1 cut(s)	203
SaqAI	TTAA	4 cut(s)	873, 939, 956, 963
SatI	GCNGC	7 cut(s)	21, 115, 189, 192, 324, 471, 522
Sau3AI	GATC	3 cut(s)	175, 571, 923
Sau96I	GGNCC	3 cut(s)	67, 691, 790
SchI	GAGTC	1 cut(s)	534
ScrFI	CCNGG	4 cut(s)	104, 353, 932, 948
SduI	GDGCHC	3 cut(s)	48, 77, 85
SexAI	ACCWGGT	1 cut(s)	946
SfaNI	GCATC	2 cut(s)	229, 251
SfcI	CTRYAG	1 cut(s)	21
SinI	GGWCC	2 cut(s)	691, 790
SmiMI	CAYNNNNRTG	1 cut(s)	203
SphI	GCATGC	1 cut(s)	208
Sse9I	AATT	9 cut(s)	39, 164, 183, 583, 685, 759, 768, 854, 964
SsiI	CCGC	6 cut(s)	65, 114, 202, 414, 816, 831
SspMI	CTAG	4 cut(s)	12, 531, 632, 782
StyD4I	CCNGG	4 cut(s)	102, 351, 930, 946
StyI	CCWWGG	1 cut(s)	867
TaaI	ACNGT	1 cut(s)	811
TaiI	ACGT	1 cut(s)	649
TaqI	TCGA	1 cut(s)	720
TasI	AATT	9 cut(s)	39, 164, 183, 583, 685, 759, 768, 854, 964
TauI	GCSGC	1 cut(s)	117
TfiI	GAWTC	2 cut(s)	96, 512
Tru1I	TTAA	4 cut(s)	873, 939, 956, 963
Tru9I	TTAA	4 cut(s)	873, 939, 956, 963
TscAI	CASTG	5 cut(s)	30, 77, 510, 601, 816
TseFI	GTSAC	1 cut(s)	811
TseI	GCWGC	6 cut(s)	20, 188, 191, 323, 470, 521
Tsp45I	GTSAC	1 cut(s)	811
TspDTI	ATGAA	3 cut(s)	17, 551, 632
TspRI	CASTG	5 cut(s)	30, 77, 510, 601, 816
VpaK11BI	GGWCC	2 cut(s)	691, 790
XapI	RAATTY	3 cut(s)	164, 759, 854
XceI	RCATGY	1 cut(s)	208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	874
XspI	CTAG	4 cut(s)	12, 531, 632, 782
Zsp2I	ATGCAT	1 cut(s)	244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.