Prupe.6G135500_v2.0.a1

OTU domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
10778117 .. 10785330
7214 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G135500.4

Sequence Viewer

Length: 1617 bp
ATGACTCGGATTCTGGTTCAGCGAGGTTCTTCAAGTGGTTCTTCTTCGAACCCAAGCCGTCCTTCTTCCTTGTCTGGGTCCTCTTCAGGTTGGGCACAGCCACAGGTTAATAGTCCTCAGGTTGTTTCAGTTGTGAAAGAAGAGGAAATTGGAGAGGAGGCACAGGAACATGTTATTGTTGATGAGCTGTCAGAGTATTGTGGGAGTGGTGACAATAAGGCTGTAAAAAATGACGATCTATTGACCGAAAGCATTCATAATGATGACAATGTGAGTTCAAGTGATGAGCTAGCTGAGGGGGAGAAAGTTAGCAAAAATGACATTGCAGACCCAGGGGAAATGATGAAAGGTTTAGGTGGGTTGAGGATTTCTGAAAAGGTGACAGTTGAAAATGTGGACTCAAGCAGGGATTCTTTACAAAATGCGATTGGGAGTTCTCAGCCACCACCTCCTCCTGTTCCTCCCCCGAAACTTTCCTCAGCAAACTCAAATTCAAGGAGATCTGTCTCAGGAAGTTCAAATTCTGTGCGAATTGGACCTTCGAGAAGAGCAGTTGCCTGGCCTGTTGTTTCAACTAGGACTTCACCAACTGGGTCACGGCCTTCTTCCCCCAGGTCTCATGGTGAAGGCGAGGGGTACAATAGTGCTGATGAACAGAGCCCTTGCTTTGTATCCTCCTATGATGATGTTGAAAGAGAACGACAGTTTGAAATTGATATTAGACGTGCAAAAGGTTTTGAAGTGAAAAGAATGCTGGAGGATGGGAATTGTCTCTTTCGTGCTGTTGCTGATCAAGTTTATGGAGATTCTGAAGCATATGACTTGATCAGGCAAATGTGCATAGATTATATGGAGCGAGAGAGGGATTACTTTTCTCAATTTATTACAGAAGGATTCACCTCTTATTGCAAGAGGAAAAGAAGAGACAAGGTGTATGGAAACAATGTGGAGATCCAAGCCTTATCCGAAATGTATAATCGACCCATCCATATTTATTCCTATAGCACAGAACCTATTAATATCTTCCACGGGAGCTATGACACGGACACACCACCCGTACGATTAAGTTACCATCATGGAAATCATTACAACTCTCTTGTTGATCCACGTCGTCAGACCATCGGTGCAGGACTTGGGTTCAGCTGTCTTCGCGGGATGGGTGCAAATGTTGACAAGGATCAGGTCAAGGCTGCTATTAAGGCTCAACAAGACCAACAAATTGATAATGCACTTCTAGCTGAGGGGCGATTCTACTCAGATCTTGAGCTCACAGAGAAAGAAATTGAACGCATGGTGATGGAAGCTTCGAGGGCTGAGTATCATGCAGATGACACATTCAAGCAACAACTTGGAAGGAGAGAATCTTCCACTTCTAGCGCTGAGCCATCATCTTCTGGAGCTAGATCATCAGGAAGTGAGACTAAGCTAGGAGTGAGGGGCCATGGTTTTCAAGATTCCCCTCTTAGCAGCAGTATGCAAGTTGTGCTGTCGATGGGGTTCAGCTACCTGCAGGTGATCGAGGCTTACAGCATATTCGGAGATGATGTCGATTCCATGGTTTGTTACTTATTGGAAACTAGCAGCAGTAGCAGGCGCAAAGGCAAGGCAACTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

539

Amino Acids

59.23

Weight (kDa)

5.14

Isoelectric Point (pI)

63.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1501
Acc36I ACCTGC 2 cut(s) 1501, 1515
AccII CGCG 1 cut(s) 1152
AciI CCGC 1 cut(s) 1152
AclWI GGATC 3 cut(s) 946, 1097, 1185
AcsI RAATTY 2 cut(s) 490, 520
AcuI CTGAAG 2 cut(s) 69, 831
AfaI GTAC 2 cut(s) 638, 1059
AfeI AGCGCT 1 cut(s) 1378
AfiI CCNNNNNNNGG 1 cut(s) 75
AflIII ACRYGT 1 cut(s) 169
AjiI CACGTC 2 cut(s) 725, 1109
AjnI CCWGG 3 cut(s) 331, 557, 611
AjuI GAANNNNNNNTTGG 4 cut(s) 46, 78, 132, 164
Alw21I GWGCWC 1 cut(s) 1269
Alw26I GTCTC 5 cut(s) 511, 621, 776, 918, 1412
AlwI GGATC 3 cut(s) 946, 1097, 1185
Aor51HI AGCGCT 1 cut(s) 1378
AoxI GGCC 3 cut(s) 560, 599, 1438
ApeKI GCWGC 3 cut(s) 1190, 1467, 1581
ApoI RAATTY 2 cut(s) 490, 520
AseI ATTAAT 1 cut(s) 1017
Asp700I GAANNNNTTC 1 cut(s) 252
AspLEI GCGC 2 cut(s) 1379, 1596
AspS9I GGNCC 3 cut(s) 78, 536, 1438
AsuHPI GGTGA 7 cut(s) 221, 391, 576, 635, 889, 1306, 1525
AsuII TTCGAA 1 cut(s) 47
AsuNHI GCTAGC 1 cut(s) 289
AvaII GGWCC 2 cut(s) 78, 536
AxyI CCTNAGG 1 cut(s) 117
BaeGI GKGCMC 1 cut(s) 97
BaeI ACNNNNGTAYC 2 cut(s) 628, 661
BanII GRGCYC 2 cut(s) 662, 1269
BbsI GAAGAC 1 cut(s) 1139
Bbv12I GWGCWC 1 cut(s) 1269
BbvCI CCTCAGC 3 cut(s) 294, 478, 1239
BbvI GCAGC 3 cut(s) 1177, 1479, 1593
BccI CCATC 8 cut(s) 755, 992, 1080, 1127, 1150, 1291, 1393, 1486
BceAI ACGGC 2 cut(s) 42, 614
BciT130I CCWGG 3 cut(s) 333, 559, 613
BciVI GTATCC 1 cut(s) 682
BclI TGATCA 2 cut(s) 790, 825
BcoDI GTCTC 5 cut(s) 511, 621, 776, 918, 1412
BfaI CTAG 7 cut(s) 290, 576, 1235, 1374, 1401, 1427, 1578
BfmI CTRYAG 2 cut(s) 1000, 1508
BfoI RGCGCY 1 cut(s) 1380
BfuAI ACCTGC 2 cut(s) 1501, 1515
BfuI GTATCC 1 cut(s) 682
BglII AGATCT 2 cut(s) 500, 1258
BisI GCNGC 3 cut(s) 1191, 1468, 1582
BlpI GCTNAGC 1 cut(s) 1380
BlsI GCNGC 3 cut(s) 1192, 1469, 1583
Bme1390I CCNGG 3 cut(s) 333, 559, 613
Bme18I GGWCC 2 cut(s) 78, 536
BmgBI CACGTC 2 cut(s) 725, 1109
BmgT120I GGNCC 3 cut(s) 78, 536, 1438
BmiI GGNNCC 2 cut(s) 79, 1439
BmrFI CCNGG 3 cut(s) 333, 559, 613
BmrI ACTGGG 1 cut(s) 600
BmtI GCTAGC 1 cut(s) 293
BmuI ACTGGG 1 cut(s) 600
BpiI GAAGAC 1 cut(s) 1139
BpmI CTGGAG 2 cut(s) 776, 1416
Bpu10I CCTNAGC 3 cut(s) 294, 478, 1239
Bpu1102I GCTNAGC 1 cut(s) 1380
Bpu14I TTCGAA 1 cut(s) 47
BpuEI CTTGAG 2 cut(s) 385, 1283
BsaI GGTCTC 1 cut(s) 621
BsaJI CCNNGG 6 cut(s) 331, 332, 611, 1027, 1441, 1554
BsaXI ACNNNNNCTCC 2 cut(s) 1530, 1560
Bsc4I CCNNNNNNNGG 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 595
Bse21I CCTNAGG 1 cut(s) 117
Bse3DI GCAATG 1 cut(s) 321
BseBI CCWGG 3 cut(s) 333, 559, 613
BseDI CCNNGG 6 cut(s) 331, 332, 611, 1027, 1441, 1554
BseGI GGATG 3 cut(s) 766, 984, 1161
BseLI CCNNNNNNNGG 1 cut(s) 75
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 9 cut(s) 131, 285, 452, 492, 522, 1230, 1269, 1305, 1371
BseNI ACTGG 1 cut(s) 595
BseRI GAGGAG 2 cut(s) 170, 441
BseSI GKGCMC 1 cut(s) 97
BseXI GCAGC 3 cut(s) 1177, 1479, 1593
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 1 cut(s) 1152
BshFI GGCC 3 cut(s) 562, 601, 1440
BsiHKAI GWGCWC 1 cut(s) 1269
BsiWI CGTACG 1 cut(s) 1057
BslI CCNNNNNNNGG 1 cut(s) 75
BsmAI GTCTC 5 cut(s) 511, 621, 776, 918, 1412
BsmI GAATGC 2 cut(s) 252, 756
BsnI GGCC 3 cut(s) 562, 601, 1440
Bso31I GGTCTC 1 cut(s) 621
Bsp119I TTCGAA 1 cut(s) 47
Bsp1286I GDGCHC 3 cut(s) 97, 662, 1269
Bsp1720I GCTNAGC 1 cut(s) 1380
Bsp19I CCATGG 2 cut(s) 1441, 1554
BspACI CCGC 1 cut(s) 1152
BspANI GGCC 3 cut(s) 562, 601, 1440
BspCNI CTCAG 9 cut(s) 130, 286, 451, 491, 521, 1231, 1268, 1306, 1372
BspFNI CGCG 1 cut(s) 1152
BspLI GGNNCC 2 cut(s) 79, 1439
BspMAI CTGCAG 1 cut(s) 1512
BspMI ACCTGC 2 cut(s) 1501, 1515
BspOI GCTAGC 1 cut(s) 293
BspPI GGATC 3 cut(s) 946, 1097, 1185
BspQI GCTCTTC 1 cut(s) 541
BspT104I TTCGAA 1 cut(s) 47
BspTNI GGTCTC 1 cut(s) 621
BsrDI GCAATG 1 cut(s) 321
BsrI ACTGG 1 cut(s) 595
BssECI CCNNGG 6 cut(s) 331, 332, 611, 1027, 1441, 1554
BssT1I CCWWGG 2 cut(s) 1441, 1554
Bst2UI CCWGG 3 cut(s) 333, 559, 613
Bst4CI ACNGT 2 cut(s) 385, 705
Bst6I CTCTTC 4 cut(s) 88, 135, 541, 916
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstBI TTCGAA 1 cut(s) 47
BstC8I GCNNGC 2 cut(s) 291, 1592
BstDSI CCRYGG 3 cut(s) 1027, 1441, 1554
BstF5I GGATG 3 cut(s) 766, 984, 1161
BstFNI CGCG 1 cut(s) 1152
BstH2I RGCGCY 1 cut(s) 1380
BstHHI GCGC 2 cut(s) 1379, 1596
BstMAI GTCTC 5 cut(s) 511, 621, 776, 918, 1412
BstMWI GCNNNNNNNGC 6 cut(s) 1149, 1199, 1235, 1310, 1483, 1587
BstNI CCWGG 3 cut(s) 333, 559, 613
BstNSI RCATGY 1 cut(s) 173
BstSCI CCNGG 3 cut(s) 331, 557, 611
BstSFI CTRYAG 2 cut(s) 1000, 1508
BstSLI GKGCMC 1 cut(s) 97
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 3 cut(s) 1177, 1479, 1593
BstV2I GAAGAC 1 cut(s) 1139
BstX2I RGATCY 3 cut(s) 500, 951, 1258
BstYI RGATCY 3 cut(s) 500, 951, 1258
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 682
BsuRI GGCC 3 cut(s) 562, 601, 1440
BtgI CCRYGG 3 cut(s) 1027, 1441, 1554
BtrI CACGTC 2 cut(s) 725, 1109
BtsCI GGATG 3 cut(s) 766, 984, 1161
BveI ACCTGC 2 cut(s) 1501, 1515
Cac8I GCNNGC 2 cut(s) 291, 1592
CfoI GCGC 2 cut(s) 1379, 1596
Cfr13I GGNCC 3 cut(s) 78, 536, 1438
Csp6I GTAC 2 cut(s) 637, 1058
CviAII CATG 7 cut(s) 170, 620, 1076, 1291, 1322, 1442, 1555
CviQI GTAC 2 cut(s) 637, 1058
Eam1104I CTCTTC 4 cut(s) 88, 135, 541, 916
EarI CTCTTC 4 cut(s) 88, 135, 541, 916
Ecl136II GAGCTC 1 cut(s) 1267
Eco130I CCWWGG 2 cut(s) 1441, 1554
Eco24I GRGCYC 2 cut(s) 662, 1269
Eco31I GGTCTC 1 cut(s) 621
Eco47I GGWCC 2 cut(s) 78, 536
Eco47III AGCGCT 1 cut(s) 1378
Eco53kI GAGCTC 1 cut(s) 1267
Eco57I CTGAAG 2 cut(s) 69, 831
Eco81I CCTNAGG 1 cut(s) 117
EcoICRI GAGCTC 1 cut(s) 1267
EcoO109I RGGNCCY 1 cut(s) 78
EcoRII CCWGG 3 cut(s) 331, 557, 611
EcoT14I CCWWGG 2 cut(s) 1441, 1554
EcoT38I GRGCYC 2 cut(s) 662, 1269
ErhI CCWWGG 2 cut(s) 1441, 1554
FaeI CATG 7 cut(s) 173, 623, 1079, 1294, 1325, 1445, 1558
FalI AAGNNNNNCTT 4 cut(s) 25, 57, 46, 78
FatI CATG 7 cut(s) 169, 619, 1075, 1290, 1321, 1441, 1554
FauI CCCGC 1 cut(s) 1145
FauNDI CATATG 1 cut(s) 817
FbaI TGATCA 2 cut(s) 790, 825
Fnu4HI GCNGC 3 cut(s) 1191, 1468, 1582
FokI GGATG 3 cut(s) 773, 971, 1168
FriOI GRGCYC 2 cut(s) 662, 1269
Fsp4HI GCNGC 3 cut(s) 1191, 1468, 1582
FspBI CTAG 7 cut(s) 290, 576, 1235, 1374, 1401, 1427, 1578
GlaI GCGC 2 cut(s) 1378, 1595
GluI GCNGC 3 cut(s) 1191, 1468, 1582
GsuI CTGGAG 2 cut(s) 776, 1416
HaeII RGCGCY 1 cut(s) 1380
HaeIII GGCC 3 cut(s) 562, 601, 1440
HhaI GCGC 2 cut(s) 1379, 1596
Hin1II CATG 7 cut(s) 173, 623, 1079, 1294, 1325, 1445, 1558
Hin6I GCGC 2 cut(s) 1377, 1594
HinP1I GCGC 2 cut(s) 1377, 1594
HincII GTYRAC 1 cut(s) 1171
HindII GTYRAC 1 cut(s) 1171
HindIII AAGCTT 1 cut(s) 1302
HphI GGTGA 7 cut(s) 221, 391, 576, 635, 889, 1306, 1525
Hpy166II GTNNAC 2 cut(s) 397, 1171
Hpy188I TCNGA 8 cut(s) 9, 193, 373, 811, 967, 1116, 1258, 1538
Hpy188III TCNNGA 6 cut(s) 510, 543, 1262, 1395, 1410, 1451
Hpy8I GTNNAC 2 cut(s) 397, 1171
Hpy99I CGWCG 1 cut(s) 1113
HpyAV CCTTC 6 cut(s) 72, 549, 612, 620, 884, 1347
HpyCH4III ACNGT 2 cut(s) 385, 705
HpyCH4IV ACGT 2 cut(s) 724, 1108
HpyF10VI GCNNNNNNNGC 6 cut(s) 1149, 1199, 1235, 1310, 1483, 1587
HpySE526I ACGT 2 cut(s) 724, 1108
Hsp92II CATG 7 cut(s) 173, 623, 1079, 1294, 1325, 1445, 1558
HspAI GCGC 2 cut(s) 1377, 1594
Ksp22I TGATCA 2 cut(s) 790, 825
LguI GCTCTTC 1 cut(s) 541
LmnI GCTCC 3 cut(s) 853, 1032, 1397
Lsp1109I GCAGC 3 cut(s) 1177, 1479, 1593
MaeI CTAG 7 cut(s) 290, 576, 1235, 1374, 1401, 1427, 1578
MaeII ACGT 2 cut(s) 724, 1108
MaeIII GTNAC 5 cut(s) 209, 379, 594, 1067, 1562
MflI RGATCY 3 cut(s) 500, 951, 1258
MhlI GDGCHC 3 cut(s) 97, 662, 1269
MluCI AATT 9 cut(s) 147, 490, 520, 531, 711, 766, 878, 1218, 1281
MlyI GAGTC 1 cut(s) 392
MroXI GAANNNNTTC 1 cut(s) 252
MseI TTAA 4 cut(s) 108, 1017, 1064, 1197
MslI CAYNNNNRTG 3 cut(s) 261, 1295, 1326
MspA1I CMGCKG 1 cut(s) 1143
MspR9I CCNGG 3 cut(s) 333, 559, 613
Mva1269I GAATGC 2 cut(s) 252, 756
MvaI CCWGG 3 cut(s) 333, 559, 613
MvnI CGCG 1 cut(s) 1152
MwoI GCNNNNNNNGC 6 cut(s) 1149, 1199, 1235, 1310, 1483, 1587
NcoI CCATGG 2 cut(s) 1441, 1554
NdeI CATATG 1 cut(s) 817
NheI GCTAGC 1 cut(s) 289
NlaIII CATG 7 cut(s) 173, 623, 1079, 1294, 1325, 1445, 1558
NlaIV GGNNCC 2 cut(s) 79, 1439
NmuCI GTSAC 3 cut(s) 209, 379, 594
NspI RCATGY 1 cut(s) 173
NspV TTCGAA 1 cut(s) 47
PaqCI CACCTGC 1 cut(s) 1501
PasI CCCWGGG 1 cut(s) 332
PciI ACATGT 1 cut(s) 169
PciSI GCTCTTC 1 cut(s) 541
PctI GAATGC 2 cut(s) 252, 756
PdmI GAANNNNTTC 1 cut(s) 252
PfeI GAWTC 8 cut(s) 10, 410, 806, 894, 1248, 1361, 1454, 1550
Pfl23II CGTACG 1 cut(s) 1057
PkrI GCNGC 3 cut(s) 1192, 1469, 1583
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
PpuMI RGGWCCY 1 cut(s) 78
PscI ACATGT 1 cut(s) 169
PshBI ATTAAT 1 cut(s) 1017
Psp124BI GAGCTC 1 cut(s) 1269
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 3 cut(s) 331, 557, 611
PspGI CCWGG 3 cut(s) 331, 557, 611
PspLI CGTACG 1 cut(s) 1057
PspN4I GGNNCC 2 cut(s) 79, 1439
PspPI GGNCC 3 cut(s) 78, 536, 1438
PspPPI RGGWCCY 1 cut(s) 78
PstI CTGCAG 1 cut(s) 1512
PsuI RGATCY 3 cut(s) 500, 951, 1258
PvuII CAGCTG 1 cut(s) 1143
RsaI GTAC 2 cut(s) 638, 1059
RsaNI GTAC 2 cut(s) 637, 1058
RseI CAYNNNNRTG 3 cut(s) 261, 1295, 1326
SacI GAGCTC 1 cut(s) 1269
SapI GCTCTTC 1 cut(s) 541
SaqAI TTAA 4 cut(s) 108, 1017, 1064, 1197
SatI GCNGC 3 cut(s) 1191, 1468, 1582
Sau96I GGNCC 3 cut(s) 78, 536, 1438
SbfI CCTGCAGG 1 cut(s) 1512
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 3 cut(s) 333, 559, 613
SdaI CCTGCAGG 1 cut(s) 1512
SduI GDGCHC 3 cut(s) 97, 662, 1269
SfcI CTRYAG 2 cut(s) 1000, 1508
SfuI TTCGAA 1 cut(s) 47
SinI GGWCC 2 cut(s) 78, 536
SmiMI CAYNNNNRTG 3 cut(s) 261, 1295, 1326
SmlI CTYRAG 2 cut(s) 400, 1262
SmoI CTYRAG 2 cut(s) 400, 1262
Sse8387I CCTGCAGG 1 cut(s) 1512
Sse9I AATT 9 cut(s) 147, 490, 520, 531, 711, 766, 878, 1218, 1281
SsiI CCGC 1 cut(s) 1152
SspMI CTAG 7 cut(s) 290, 576, 1235, 1374, 1401, 1427, 1578
SstI GAGCTC 1 cut(s) 1269
StyD4I CCNGG 3 cut(s) 331, 557, 611
StyI CCWWGG 2 cut(s) 1441, 1554
TaaI ACNGT 2 cut(s) 385, 705
TaiI ACGT 2 cut(s) 727, 1111
TaqI TCGA 7 cut(s) 47, 542, 979, 1307, 1490, 1518, 1548
TaqII GACCGA 1 cut(s) 260
TasI AATT 9 cut(s) 147, 490, 520, 531, 711, 766, 878, 1218, 1281
TfiI GAWTC 8 cut(s) 10, 410, 806, 894, 1248, 1361, 1454, 1550
Tru1I TTAA 4 cut(s) 108, 1017, 1064, 1197
Tru9I TTAA 4 cut(s) 108, 1017, 1064, 1197
TseFI GTSAC 3 cut(s) 209, 379, 594
TseI GCWGC 3 cut(s) 1190, 1467, 1581
Tsp45I GTSAC 3 cut(s) 209, 379, 594
TspDTI ATGAA 3 cut(s) 245, 359, 666
TspGWI ACGGA 1 cut(s) 1058
VpaK11BI GGWCC 2 cut(s) 78, 536
VspI ATTAAT 1 cut(s) 1017
XapI RAATTY 2 cut(s) 490, 520
XceI RCATGY 1 cut(s) 173
XmnI GAANNNNTTC 1 cut(s) 252
XspI CTAG 7 cut(s) 290, 576, 1235, 1374, 1401, 1427, 1578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.