OTU domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27350 AT2G27350 AT2G27350 AT2G27350 AT2G27350 AT2G27350 |
| fragaria_vesca | FvH4_3g25610 FvH4_3g25610 FvH4_3g25610 |
| malus_domestica | MD03G1149500.v1.1 MD11G1168400.v1.1 |
| prunus_persica | Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 Prupe.6G135500_v2.0.a1 |
| pyrus_communis | pycom03g10340 pycom11g14110 |
| rosa_chinensis | RchiOBHm_Chr5g0045751 |
| rosa_laevigata | RLG00000034406 |
| rosa_multiflora | Rmu_sc0005605.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00035070 |
| rosa_rugosa | Rorug05G0227100 Rorug05G0227200 Rorug05G0227300 Rorug05G0227400 |
| rosa_samantha | Rh5AG308100 Rh5BG316900 Rh5CG342900 Rh5DG327200 |
| rosa_wichuraiana | Rw5G028860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1501 |
| Acc36I | ACCTGC | 2 cut(s) | 1501, 1515 |
| AccII | CGCG | 1 cut(s) | 1152 |
| AciI | CCGC | 1 cut(s) | 1152 |
| AclWI | GGATC | 3 cut(s) | 946, 1097, 1185 |
| AcsI | RAATTY | 2 cut(s) | 490, 520 |
| AcuI | CTGAAG | 2 cut(s) | 69, 831 |
| AfaI | GTAC | 2 cut(s) | 638, 1059 |
| AfeI | AGCGCT | 1 cut(s) | 1378 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 75 |
| AflIII | ACRYGT | 1 cut(s) | 169 |
| AjiI | CACGTC | 2 cut(s) | 725, 1109 |
| AjnI | CCWGG | 3 cut(s) | 331, 557, 611 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 46, 78, 132, 164 |
| Alw21I | GWGCWC | 1 cut(s) | 1269 |
| Alw26I | GTCTC | 5 cut(s) | 511, 621, 776, 918, 1412 |
| AlwI | GGATC | 3 cut(s) | 946, 1097, 1185 |
| Aor51HI | AGCGCT | 1 cut(s) | 1378 |
| AoxI | GGCC | 3 cut(s) | 560, 599, 1438 |
| ApeKI | GCWGC | 3 cut(s) | 1190, 1467, 1581 |
| ApoI | RAATTY | 2 cut(s) | 490, 520 |
| AseI | ATTAAT | 1 cut(s) | 1017 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 252 |
| AspLEI | GCGC | 2 cut(s) | 1379, 1596 |
| AspS9I | GGNCC | 3 cut(s) | 78, 536, 1438 |
| AsuHPI | GGTGA | 7 cut(s) | 221, 391, 576, 635, 889, 1306, 1525 |
| AsuII | TTCGAA | 1 cut(s) | 47 |
| AsuNHI | GCTAGC | 1 cut(s) | 289 |
| AvaII | GGWCC | 2 cut(s) | 78, 536 |
| AxyI | CCTNAGG | 1 cut(s) | 117 |
| BaeGI | GKGCMC | 1 cut(s) | 97 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 628, 661 |
| BanII | GRGCYC | 2 cut(s) | 662, 1269 |
| BbsI | GAAGAC | 1 cut(s) | 1139 |
| Bbv12I | GWGCWC | 1 cut(s) | 1269 |
| BbvCI | CCTCAGC | 3 cut(s) | 294, 478, 1239 |
| BbvI | GCAGC | 3 cut(s) | 1177, 1479, 1593 |
| BccI | CCATC | 8 cut(s) | 755, 992, 1080, 1127, 1150, 1291, 1393, 1486 |
| BceAI | ACGGC | 2 cut(s) | 42, 614 |
| BciT130I | CCWGG | 3 cut(s) | 333, 559, 613 |
| BciVI | GTATCC | 1 cut(s) | 682 |
| BclI | TGATCA | 2 cut(s) | 790, 825 |
| BcoDI | GTCTC | 5 cut(s) | 511, 621, 776, 918, 1412 |
| BfaI | CTAG | 7 cut(s) | 290, 576, 1235, 1374, 1401, 1427, 1578 |
| BfmI | CTRYAG | 2 cut(s) | 1000, 1508 |
| BfoI | RGCGCY | 1 cut(s) | 1380 |
| BfuAI | ACCTGC | 2 cut(s) | 1501, 1515 |
| BfuI | GTATCC | 1 cut(s) | 682 |
| BglII | AGATCT | 2 cut(s) | 500, 1258 |
| BisI | GCNGC | 3 cut(s) | 1191, 1468, 1582 |
| BlpI | GCTNAGC | 1 cut(s) | 1380 |
| BlsI | GCNGC | 3 cut(s) | 1192, 1469, 1583 |
| Bme1390I | CCNGG | 3 cut(s) | 333, 559, 613 |
| Bme18I | GGWCC | 2 cut(s) | 78, 536 |
| BmgBI | CACGTC | 2 cut(s) | 725, 1109 |
| BmgT120I | GGNCC | 3 cut(s) | 78, 536, 1438 |
| BmiI | GGNNCC | 2 cut(s) | 79, 1439 |
| BmrFI | CCNGG | 3 cut(s) | 333, 559, 613 |
| BmrI | ACTGGG | 1 cut(s) | 600 |
| BmtI | GCTAGC | 1 cut(s) | 293 |
| BmuI | ACTGGG | 1 cut(s) | 600 |
| BpiI | GAAGAC | 1 cut(s) | 1139 |
| BpmI | CTGGAG | 2 cut(s) | 776, 1416 |
| Bpu10I | CCTNAGC | 3 cut(s) | 294, 478, 1239 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1380 |
| Bpu14I | TTCGAA | 1 cut(s) | 47 |
| BpuEI | CTTGAG | 2 cut(s) | 385, 1283 |
| BsaI | GGTCTC | 1 cut(s) | 621 |
| BsaJI | CCNNGG | 6 cut(s) | 331, 332, 611, 1027, 1441, 1554 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1530, 1560 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 75 |
| Bse1I | ACTGG | 1 cut(s) | 595 |
| Bse21I | CCTNAGG | 1 cut(s) | 117 |
| Bse3DI | GCAATG | 1 cut(s) | 321 |
| BseBI | CCWGG | 3 cut(s) | 333, 559, 613 |
| BseDI | CCNNGG | 6 cut(s) | 331, 332, 611, 1027, 1441, 1554 |
| BseGI | GGATG | 3 cut(s) | 766, 984, 1161 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 75 |
| BseMI | GCAATG | 1 cut(s) | 321 |
| BseMII | CTCAG | 9 cut(s) | 131, 285, 452, 492, 522, 1230, 1269, 1305, 1371 |
| BseNI | ACTGG | 1 cut(s) | 595 |
| BseRI | GAGGAG | 2 cut(s) | 170, 441 |
| BseSI | GKGCMC | 1 cut(s) | 97 |
| BseXI | GCAGC | 3 cut(s) | 1177, 1479, 1593 |
| BsgI | GTGCAG | 1 cut(s) | 1146 |
| Bsh1236I | CGCG | 1 cut(s) | 1152 |
| BshFI | GGCC | 3 cut(s) | 562, 601, 1440 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1269 |
| BsiWI | CGTACG | 1 cut(s) | 1057 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 75 |
| BsmAI | GTCTC | 5 cut(s) | 511, 621, 776, 918, 1412 |
| BsmI | GAATGC | 2 cut(s) | 252, 756 |
| BsnI | GGCC | 3 cut(s) | 562, 601, 1440 |
| Bso31I | GGTCTC | 1 cut(s) | 621 |
| Bsp119I | TTCGAA | 1 cut(s) | 47 |
| Bsp1286I | GDGCHC | 3 cut(s) | 97, 662, 1269 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1380 |
| Bsp19I | CCATGG | 2 cut(s) | 1441, 1554 |
| BspACI | CCGC | 1 cut(s) | 1152 |
| BspANI | GGCC | 3 cut(s) | 562, 601, 1440 |
| BspCNI | CTCAG | 9 cut(s) | 130, 286, 451, 491, 521, 1231, 1268, 1306, 1372 |
| BspFNI | CGCG | 1 cut(s) | 1152 |
| BspLI | GGNNCC | 2 cut(s) | 79, 1439 |
| BspMAI | CTGCAG | 1 cut(s) | 1512 |
| BspMI | ACCTGC | 2 cut(s) | 1501, 1515 |
| BspOI | GCTAGC | 1 cut(s) | 293 |
| BspPI | GGATC | 3 cut(s) | 946, 1097, 1185 |
| BspQI | GCTCTTC | 1 cut(s) | 541 |
| BspT104I | TTCGAA | 1 cut(s) | 47 |
| BspTNI | GGTCTC | 1 cut(s) | 621 |
| BsrDI | GCAATG | 1 cut(s) | 321 |
| BsrI | ACTGG | 1 cut(s) | 595 |
| BssECI | CCNNGG | 6 cut(s) | 331, 332, 611, 1027, 1441, 1554 |
| BssT1I | CCWWGG | 2 cut(s) | 1441, 1554 |
| Bst2UI | CCWGG | 3 cut(s) | 333, 559, 613 |
| Bst4CI | ACNGT | 2 cut(s) | 385, 705 |
| Bst6I | CTCTTC | 4 cut(s) | 88, 135, 541, 916 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1483 |
| BstBI | TTCGAA | 1 cut(s) | 47 |
| BstC8I | GCNNGC | 2 cut(s) | 291, 1592 |
| BstDSI | CCRYGG | 3 cut(s) | 1027, 1441, 1554 |
| BstF5I | GGATG | 3 cut(s) | 766, 984, 1161 |
| BstFNI | CGCG | 1 cut(s) | 1152 |
| BstH2I | RGCGCY | 1 cut(s) | 1380 |
| BstHHI | GCGC | 2 cut(s) | 1379, 1596 |
| BstMAI | GTCTC | 5 cut(s) | 511, 621, 776, 918, 1412 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1149, 1199, 1235, 1310, 1483, 1587 |
| BstNI | CCWGG | 3 cut(s) | 333, 559, 613 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstSCI | CCNGG | 3 cut(s) | 331, 557, 611 |
| BstSFI | CTRYAG | 2 cut(s) | 1000, 1508 |
| BstSLI | GKGCMC | 1 cut(s) | 97 |
| BstUI | CGCG | 1 cut(s) | 1152 |
| BstV1I | GCAGC | 3 cut(s) | 1177, 1479, 1593 |
| BstV2I | GAAGAC | 1 cut(s) | 1139 |
| BstX2I | RGATCY | 3 cut(s) | 500, 951, 1258 |
| BstYI | RGATCY | 3 cut(s) | 500, 951, 1258 |
| Bsu36I | CCTNAGG | 1 cut(s) | 117 |
| BsuI | GTATCC | 1 cut(s) | 682 |
| BsuRI | GGCC | 3 cut(s) | 562, 601, 1440 |
| BtgI | CCRYGG | 3 cut(s) | 1027, 1441, 1554 |
| BtrI | CACGTC | 2 cut(s) | 725, 1109 |
| BtsCI | GGATG | 3 cut(s) | 766, 984, 1161 |
| BveI | ACCTGC | 2 cut(s) | 1501, 1515 |
| Cac8I | GCNNGC | 2 cut(s) | 291, 1592 |
| CfoI | GCGC | 2 cut(s) | 1379, 1596 |
| Cfr13I | GGNCC | 3 cut(s) | 78, 536, 1438 |
| Csp6I | GTAC | 2 cut(s) | 637, 1058 |
| CviAII | CATG | 7 cut(s) | 170, 620, 1076, 1291, 1322, 1442, 1555 |
| CviQI | GTAC | 2 cut(s) | 637, 1058 |
| Eam1104I | CTCTTC | 4 cut(s) | 88, 135, 541, 916 |
| EarI | CTCTTC | 4 cut(s) | 88, 135, 541, 916 |
| Ecl136II | GAGCTC | 1 cut(s) | 1267 |
| Eco130I | CCWWGG | 2 cut(s) | 1441, 1554 |
| Eco24I | GRGCYC | 2 cut(s) | 662, 1269 |
| Eco31I | GGTCTC | 1 cut(s) | 621 |
| Eco47I | GGWCC | 2 cut(s) | 78, 536 |
| Eco47III | AGCGCT | 1 cut(s) | 1378 |
| Eco53kI | GAGCTC | 1 cut(s) | 1267 |
| Eco57I | CTGAAG | 2 cut(s) | 69, 831 |
| Eco81I | CCTNAGG | 1 cut(s) | 117 |
| EcoICRI | GAGCTC | 1 cut(s) | 1267 |
| EcoO109I | RGGNCCY | 1 cut(s) | 78 |
| EcoRII | CCWGG | 3 cut(s) | 331, 557, 611 |
| EcoT14I | CCWWGG | 2 cut(s) | 1441, 1554 |
| EcoT38I | GRGCYC | 2 cut(s) | 662, 1269 |
| ErhI | CCWWGG | 2 cut(s) | 1441, 1554 |
| FaeI | CATG | 7 cut(s) | 173, 623, 1079, 1294, 1325, 1445, 1558 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 25, 57, 46, 78 |
| FatI | CATG | 7 cut(s) | 169, 619, 1075, 1290, 1321, 1441, 1554 |
| FauI | CCCGC | 1 cut(s) | 1145 |
| FauNDI | CATATG | 1 cut(s) | 817 |
| FbaI | TGATCA | 2 cut(s) | 790, 825 |
| Fnu4HI | GCNGC | 3 cut(s) | 1191, 1468, 1582 |
| FokI | GGATG | 3 cut(s) | 773, 971, 1168 |
| FriOI | GRGCYC | 2 cut(s) | 662, 1269 |
| Fsp4HI | GCNGC | 3 cut(s) | 1191, 1468, 1582 |
| FspBI | CTAG | 7 cut(s) | 290, 576, 1235, 1374, 1401, 1427, 1578 |
| GlaI | GCGC | 2 cut(s) | 1378, 1595 |
| GluI | GCNGC | 3 cut(s) | 1191, 1468, 1582 |
| GsuI | CTGGAG | 2 cut(s) | 776, 1416 |
| HaeII | RGCGCY | 1 cut(s) | 1380 |
| HaeIII | GGCC | 3 cut(s) | 562, 601, 1440 |
| HhaI | GCGC | 2 cut(s) | 1379, 1596 |
| Hin1II | CATG | 7 cut(s) | 173, 623, 1079, 1294, 1325, 1445, 1558 |
| Hin6I | GCGC | 2 cut(s) | 1377, 1594 |
| HinP1I | GCGC | 2 cut(s) | 1377, 1594 |
| HincII | GTYRAC | 1 cut(s) | 1171 |
| HindII | GTYRAC | 1 cut(s) | 1171 |
| HindIII | AAGCTT | 1 cut(s) | 1302 |
| HphI | GGTGA | 7 cut(s) | 221, 391, 576, 635, 889, 1306, 1525 |
| Hpy166II | GTNNAC | 2 cut(s) | 397, 1171 |
| Hpy188I | TCNGA | 8 cut(s) | 9, 193, 373, 811, 967, 1116, 1258, 1538 |
| Hpy188III | TCNNGA | 6 cut(s) | 510, 543, 1262, 1395, 1410, 1451 |
| Hpy8I | GTNNAC | 2 cut(s) | 397, 1171 |
| Hpy99I | CGWCG | 1 cut(s) | 1113 |
| HpyAV | CCTTC | 6 cut(s) | 72, 549, 612, 620, 884, 1347 |
| HpyCH4III | ACNGT | 2 cut(s) | 385, 705 |
| HpyCH4IV | ACGT | 2 cut(s) | 724, 1108 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1149, 1199, 1235, 1310, 1483, 1587 |
| HpySE526I | ACGT | 2 cut(s) | 724, 1108 |
| Hsp92II | CATG | 7 cut(s) | 173, 623, 1079, 1294, 1325, 1445, 1558 |
| HspAI | GCGC | 2 cut(s) | 1377, 1594 |
| Ksp22I | TGATCA | 2 cut(s) | 790, 825 |
| LguI | GCTCTTC | 1 cut(s) | 541 |
| LmnI | GCTCC | 3 cut(s) | 853, 1032, 1397 |
| Lsp1109I | GCAGC | 3 cut(s) | 1177, 1479, 1593 |
| MaeI | CTAG | 7 cut(s) | 290, 576, 1235, 1374, 1401, 1427, 1578 |
| MaeII | ACGT | 2 cut(s) | 724, 1108 |
| MaeIII | GTNAC | 5 cut(s) | 209, 379, 594, 1067, 1562 |
| MflI | RGATCY | 3 cut(s) | 500, 951, 1258 |
| MhlI | GDGCHC | 3 cut(s) | 97, 662, 1269 |
| MluCI | AATT | 9 cut(s) | 147, 490, 520, 531, 711, 766, 878, 1218, 1281 |
| MlyI | GAGTC | 1 cut(s) | 392 |
| MroXI | GAANNNNTTC | 1 cut(s) | 252 |
| MseI | TTAA | 4 cut(s) | 108, 1017, 1064, 1197 |
| MslI | CAYNNNNRTG | 3 cut(s) | 261, 1295, 1326 |
| MspA1I | CMGCKG | 1 cut(s) | 1143 |
| MspR9I | CCNGG | 3 cut(s) | 333, 559, 613 |
| Mva1269I | GAATGC | 2 cut(s) | 252, 756 |
| MvaI | CCWGG | 3 cut(s) | 333, 559, 613 |
| MvnI | CGCG | 1 cut(s) | 1152 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1149, 1199, 1235, 1310, 1483, 1587 |
| NcoI | CCATGG | 2 cut(s) | 1441, 1554 |
| NdeI | CATATG | 1 cut(s) | 817 |
| NheI | GCTAGC | 1 cut(s) | 289 |
| NlaIII | CATG | 7 cut(s) | 173, 623, 1079, 1294, 1325, 1445, 1558 |
| NlaIV | GGNNCC | 2 cut(s) | 79, 1439 |
| NmuCI | GTSAC | 3 cut(s) | 209, 379, 594 |
| NspI | RCATGY | 1 cut(s) | 173 |
| NspV | TTCGAA | 1 cut(s) | 47 |
| PaqCI | CACCTGC | 1 cut(s) | 1501 |
| PasI | CCCWGGG | 1 cut(s) | 332 |
| PciI | ACATGT | 1 cut(s) | 169 |
| PciSI | GCTCTTC | 1 cut(s) | 541 |
| PctI | GAATGC | 2 cut(s) | 252, 756 |
| PdmI | GAANNNNTTC | 1 cut(s) | 252 |
| PfeI | GAWTC | 8 cut(s) | 10, 410, 806, 894, 1248, 1361, 1454, 1550 |
| Pfl23II | CGTACG | 1 cut(s) | 1057 |
| PkrI | GCNGC | 3 cut(s) | 1192, 1469, 1583 |
| PleI | GAGTC | 1 cut(s) | 392 |
| PpsI | GAGTC | 1 cut(s) | 392 |
| PpuMI | RGGWCCY | 1 cut(s) | 78 |
| PscI | ACATGT | 1 cut(s) | 169 |
| PshBI | ATTAAT | 1 cut(s) | 1017 |
| Psp124BI | GAGCTC | 1 cut(s) | 1269 |
| Psp5II | RGGWCCY | 1 cut(s) | 78 |
| Psp6I | CCWGG | 3 cut(s) | 331, 557, 611 |
| PspGI | CCWGG | 3 cut(s) | 331, 557, 611 |
| PspLI | CGTACG | 1 cut(s) | 1057 |
| PspN4I | GGNNCC | 2 cut(s) | 79, 1439 |
| PspPI | GGNCC | 3 cut(s) | 78, 536, 1438 |
| PspPPI | RGGWCCY | 1 cut(s) | 78 |
| PstI | CTGCAG | 1 cut(s) | 1512 |
| PsuI | RGATCY | 3 cut(s) | 500, 951, 1258 |
| PvuII | CAGCTG | 1 cut(s) | 1143 |
| RsaI | GTAC | 2 cut(s) | 638, 1059 |
| RsaNI | GTAC | 2 cut(s) | 637, 1058 |
| RseI | CAYNNNNRTG | 3 cut(s) | 261, 1295, 1326 |
| SacI | GAGCTC | 1 cut(s) | 1269 |
| SapI | GCTCTTC | 1 cut(s) | 541 |
| SaqAI | TTAA | 4 cut(s) | 108, 1017, 1064, 1197 |
| SatI | GCNGC | 3 cut(s) | 1191, 1468, 1582 |
| Sau96I | GGNCC | 3 cut(s) | 78, 536, 1438 |
| SbfI | CCTGCAGG | 1 cut(s) | 1512 |
| SchI | GAGTC | 1 cut(s) | 392 |
| ScrFI | CCNGG | 3 cut(s) | 333, 559, 613 |
| SdaI | CCTGCAGG | 1 cut(s) | 1512 |
| SduI | GDGCHC | 3 cut(s) | 97, 662, 1269 |
| SfcI | CTRYAG | 2 cut(s) | 1000, 1508 |
| SfuI | TTCGAA | 1 cut(s) | 47 |
| SinI | GGWCC | 2 cut(s) | 78, 536 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 261, 1295, 1326 |
| SmlI | CTYRAG | 2 cut(s) | 400, 1262 |
| SmoI | CTYRAG | 2 cut(s) | 400, 1262 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1512 |
| Sse9I | AATT | 9 cut(s) | 147, 490, 520, 531, 711, 766, 878, 1218, 1281 |
| SsiI | CCGC | 1 cut(s) | 1152 |
| SspMI | CTAG | 7 cut(s) | 290, 576, 1235, 1374, 1401, 1427, 1578 |
| SstI | GAGCTC | 1 cut(s) | 1269 |
| StyD4I | CCNGG | 3 cut(s) | 331, 557, 611 |
| StyI | CCWWGG | 2 cut(s) | 1441, 1554 |
| TaaI | ACNGT | 2 cut(s) | 385, 705 |
| TaiI | ACGT | 2 cut(s) | 727, 1111 |
| TaqI | TCGA | 7 cut(s) | 47, 542, 979, 1307, 1490, 1518, 1548 |
| TaqII | GACCGA | 1 cut(s) | 260 |
| TasI | AATT | 9 cut(s) | 147, 490, 520, 531, 711, 766, 878, 1218, 1281 |
| TfiI | GAWTC | 8 cut(s) | 10, 410, 806, 894, 1248, 1361, 1454, 1550 |
| Tru1I | TTAA | 4 cut(s) | 108, 1017, 1064, 1197 |
| Tru9I | TTAA | 4 cut(s) | 108, 1017, 1064, 1197 |
| TseFI | GTSAC | 3 cut(s) | 209, 379, 594 |
| TseI | GCWGC | 3 cut(s) | 1190, 1467, 1581 |
| Tsp45I | GTSAC | 3 cut(s) | 209, 379, 594 |
| TspDTI | ATGAA | 3 cut(s) | 245, 359, 666 |
| TspGWI | ACGGA | 1 cut(s) | 1058 |
| VpaK11BI | GGWCC | 2 cut(s) | 78, 536 |
| VspI | ATTAAT | 1 cut(s) | 1017 |
| XapI | RAATTY | 2 cut(s) | 490, 520 |
| XceI | RCATGY | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 1 cut(s) | 252 |
| XspI | CTAG | 7 cut(s) | 290, 576, 1235, 1374, 1401, 1427, 1578 |