RLG00000034406

OTU domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003236
Physical Location & Seq
Reverse (-)
42175502 .. 42182114
6613 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034406

Sequence Viewer

Length: 1611 bp
ATGACTAGGATTCTGGTTCAGCGAGGTTCCTCAAGTGGTTCTTCTTCCAACCCAAGCCGCTCTTCTTCCTTGTCTGGCTCTTCCTCGGCTTTGTCACAGCCACAGATTAATACTCCTCAGGTCCTCTCGGCTGTGAAAGATGAGGAGATTGAAGAGGAGCCATTGGAACATGTTATTGTGGATGATCCCTCAGAGAATTGTGGGAGTAGTGACAATGATGCCGTGAAAAATGATGATGTTTTGATGGAAAGCACTCATAATGATCACACTCCAAGTTCAAGTGATGAACTTACTGAAGTTGAGAGGGTTACTAAGAATGATAATGCCGGACAAGGGGAGTTGATGAAAGGTTTAGGCAGTTTGACAATATCTGAAAGGGTGAAAGTTGACAATGTGGACTCTGGTGGGGATACTTTACAAAATGTGATTGGGAGTTCACAGCCACCACCTCCTCCTGTTCCTCCCCCAAAAATTTCTTCACCAAACTCAAATTTAAGGAGAACTGTCACAGGAAGTTCAACTGCGGTCAGGATTGGACCTTCTAGAAGAGCAGTTGCCTGGCCAGTTGTTTCAACTAGGACGTCACCAACTGGGTCACGGCCTTCTTCTCCCAGGTCTCATGGTGAAGGCGAGGGGTACAATAGTGCCGATGAGCAAGGCCCTTGCTTTGTGTCCTCCTATGATGATATTGAAAGGGAACGGCAGTTTGAAATTGATATTAGACGTGCAAAAGGGTTTGAAGTGAAAAGAATGCTGGAGGATGGCAATTGTCTGTTTCGTGCTGTTGCAGACCAGGTATATGGGGATTCTGAAGCGTATGACTTGACCAGACAAATGTGCATAGACTATATGGAGCGAGAGAGGGATCATTTTTCTCAATTTATTACTGAAGGATTTACTTCTTATTGCAAGAGGAAAAGAAGAGACAAGGTCTACGGAAATAATGTGGAGATCCAGGCCTTATCTGAAATGTATAATCGGCCCATTCATATTTATTCCTATAGCATTGAACCTATCAATATCTTCCATGGAAGTTATGATACTGACACACCACCTGTACGGTTAAGTTACCACCATGGAAATCATTACAACTCTCTTGTTGATCCTCGCCGCTTGACCATTGGTGCAGGACTTGGGTTCAGCAGTCTTCGCGGGACAAATGCTGACAAGGATCAGGTCAAGGCTGCCATTAAGGCTCAACAAGACCAACAAATCGATAATGCACTTTTAGCTGAGGGGCGATTTTACTCGGATCTTGAGCTTACTGAGAAAGAAATTGAACGCATGGTGATGGAAGCTTCTAGGGCTGAGTATCTTGCAGATGGCACATTCAAGCAACAACTTGGCCGCAGAGAATCTTCTACTTCAAGCTGTGAGCCTTCATCTTCTGGAGCTAGATCATCAGGCAGTGAGACTAAGCCAGGGGGTAGAGACCAGGGTGGCCAGGATTCCACCTTAAGCAGTAGTATGCAAATTGTTCTGTCTATGGGATTCAGCTATCTGCAGGCCATCGAAGCTTACAGCATATTTGGAGATGACGTAGATTCCATGGTTTGTTACTTGTTGGAAACTAGCAGCAGTAGCAGGCGCAAAGGCAAGGCAACAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04622 map04622
Pfam Domains
Protein Families
OTU

Protein Analysis

537

Amino Acids

58.84

Weight (kDa)

5.05

Isoelectric Point (pI)

61.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OTU PF02338 254 - 363 4.7e-17 OTU-like cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 584
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 1 cut(s) 933
AccII CGCG 1 cut(s) 1152
AciI CCGC 5 cut(s) 58, 524, 1111, 1152, 1348
AclWI GGATC 6 cut(s) 179, 873, 946, 1097, 1179, 1260
AcoI YGGCCR 3 cut(s) 560, 1345, 1441
AcsI RAATTY 2 cut(s) 471, 490
AcuI CTGAAG 3 cut(s) 315, 831, 909
AcyI GRCGYC 1 cut(s) 581
AfaI GTAC 2 cut(s) 638, 1059
AfiI CCNNNNNNNGG 1 cut(s) 333
AflII CTTAAG 1 cut(s) 1456
AflIII ACRYGT 1 cut(s) 169
AjiI CACGTC 1 cut(s) 725
AjnI CCWGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
AjuI GAANNNNNNNTTGG 4 cut(s) 46, 78, 460, 492
AluBI AGCT 7 cut(s) 1232, 1261, 1298, 1371, 1394, 1497, 1517
AluI AGCT 7 cut(s) 1232, 1261, 1298, 1371, 1394, 1497, 1517
Alw26I GTCTC 4 cut(s) 621, 918, 1406, 1425
AlwI GGATC 6 cut(s) 179, 873, 946, 1097, 1179, 1260
AoxI GGCC 8 cut(s) 560, 599, 658, 957, 980, 1345, 1441, 1506
ApeKI GCWGC 2 cut(s) 1184, 1575
ApoI RAATTY 2 cut(s) 471, 490
AseI ATTAAT 1 cut(s) 108
AspLEI GCGC 1 cut(s) 1590
AspS9I GGNCC 4 cut(s) 121, 536, 659, 981
AsuHPI GGTGA 5 cut(s) 391, 471, 576, 635, 1300
AvaII GGWCC 2 cut(s) 121, 536
AxyI CCTNAGG 1 cut(s) 117
BaeI ACNNNNGTAYC 2 cut(s) 628, 661
BalI TGGCCA 2 cut(s) 562, 1443
BarI GAAGNNNNNNTAC 2 cut(s) 1024, 1056
BbsI GAAGAC 1 cut(s) 1139
BbvCI CCTCAGC 1 cut(s) 1233
BbvI GCAGC 2 cut(s) 1171, 1587
BccI CCATC 5 cut(s) 238, 755, 1285, 1316, 1517
BceAI ACGGC 3 cut(s) 206, 614, 716
BciT130I CCWGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
BciVI GTATCC 1 cut(s) 403
BclI TGATCA 1 cut(s) 262
BcoDI GTCTC 4 cut(s) 621, 918, 1406, 1425
BfaI CTAG 6 cut(s) 6, 543, 576, 1302, 1395, 1572
BfmI CTRYAG 2 cut(s) 1000, 1502
BfrI CTTAAG 1 cut(s) 1456
BfuI GTATCC 1 cut(s) 403
BglI GCCNNNNNGGC 1 cut(s) 1193
BisI GCNGC 5 cut(s) 58, 1111, 1185, 1348, 1576
BlsI GCNGC 5 cut(s) 59, 1112, 1186, 1349, 1577
Bme1390I CCNGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
Bme18I GGWCC 2 cut(s) 121, 536
BmgBI CACGTC 1 cut(s) 725
BmgT120I GGNCC 4 cut(s) 121, 536, 659, 981
BmiI GGNNCC 2 cut(s) 28, 159
BmrFI CCNGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
BmrI ACTGGG 1 cut(s) 600
BmsI GCATC 1 cut(s) 208
BmuI ACTGGG 1 cut(s) 600
BpiI GAAGAC 1 cut(s) 1139
BpmI CTGGAG 2 cut(s) 776, 1410
Bpu10I CCTNAGC 1 cut(s) 1233
BpuEI CTTGAG 2 cut(s) 16, 1277
Bsa29I ATCGAT 1 cut(s) 1215
BsaHI GRCGYC 1 cut(s) 581
BsaI GGTCTC 2 cut(s) 621, 1425
BsaJI CCNNGG 7 cut(s) 84, 611, 1027, 1075, 1421, 1435, 1548
BsaXI ACNNNNNCTCC 2 cut(s) 1524, 1554
Bsc4I CCNNNNNNNGG 1 cut(s) 333
Bse1I ACTGG 2 cut(s) 563, 595
Bse21I CCTNAGG 1 cut(s) 117
BseBI CCWGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
BseCI ATCGAT 1 cut(s) 1215
BseDI CCNNGG 7 cut(s) 84, 611, 1027, 1075, 1421, 1435, 1548
BseGI GGATG 2 cut(s) 187, 766
BseLI CCNNNNNNNGG 1 cut(s) 333
BseMII CTCAG 5 cut(s) 131, 204, 1224, 1257, 1299
BseNI ACTGG 2 cut(s) 563, 595
BseRI GAGGAG 4 cut(s) 105, 158, 170, 441
BseXI GCAGC 2 cut(s) 1171, 1587
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 1 cut(s) 1152
BshFI GGCC 8 cut(s) 562, 601, 660, 959, 982, 1347, 1443, 1508
BshVI ATCGAT 1 cut(s) 1215
BsiSI CCGG 1 cut(s) 327
BslFI GGGAC 1 cut(s) 1168
BslI CCNNNNNNNGG 1 cut(s) 333
BsmAI GTCTC 4 cut(s) 621, 918, 1406, 1425
BsmFI GGGAC 1 cut(s) 1168
BsmI GAATGC 1 cut(s) 756
BsnI GGCC 8 cut(s) 562, 601, 660, 959, 982, 1347, 1443, 1508
Bso31I GGTCTC 2 cut(s) 621, 1425
Bsp143I GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
Bsp19I CCATGG 3 cut(s) 1027, 1075, 1548
BspACI CCGC 5 cut(s) 58, 524, 1111, 1152, 1348
BspANI GGCC 8 cut(s) 562, 601, 660, 959, 982, 1347, 1443, 1508
BspCNI CTCAG 5 cut(s) 130, 203, 1225, 1258, 1300
BspDI ATCGAT 1 cut(s) 1215
BspFNI CGCG 1 cut(s) 1152
BspLI GGNNCC 2 cut(s) 28, 159
BspMAI CTGCAG 1 cut(s) 1506
BspPI GGATC 6 cut(s) 179, 873, 946, 1097, 1179, 1260
BspQI GCTCTTC 3 cut(s) 67, 85, 541
BspTI CTTAAG 1 cut(s) 1456
BspTNI GGTCTC 2 cut(s) 621, 1425
BsrBI CCGCTC 1 cut(s) 60
BsrI ACTGG 2 cut(s) 563, 595
BssECI CCNNGG 7 cut(s) 84, 611, 1027, 1075, 1421, 1435, 1548
BssMI GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
BssNI GRCGYC 1 cut(s) 581
BssT1I CCWWGG 3 cut(s) 1027, 1075, 1548
Bst2UI CCWGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
Bst4CI ACNGT 2 cut(s) 505, 1062
Bst6I CTCTTC 5 cut(s) 67, 85, 147, 541, 916
BstACI GRCGYC 1 cut(s) 581
BstAFI CTTAAG 1 cut(s) 1456
BstC8I GCNNGC 2 cut(s) 1506, 1586
BstDEI CTNAG 7 cut(s) 117, 190, 312, 1233, 1266, 1308, 1416
BstDSI CCRYGG 3 cut(s) 1027, 1075, 1548
BstF5I GGATG 2 cut(s) 187, 766
BstFNI CGCG 1 cut(s) 1152
BstHHI GCGC 1 cut(s) 1590
BstKTI GATC 8 cut(s) 187, 265, 868, 954, 1105, 1174, 1255, 1400
BstMAI GTCTC 4 cut(s) 621, 918, 1406, 1425
BstMBI GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
BstMWI GCNNNNNNNGC 6 cut(s) 1149, 1193, 1229, 1304, 1514, 1581
BstNI CCWGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
BstNSI RCATGY 1 cut(s) 173
BstSCI CCNGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
BstSFI CTRYAG 2 cut(s) 1000, 1502
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 2 cut(s) 1171, 1587
BstV2I GAAGAC 1 cut(s) 1139
BstX2I RGATCY 2 cut(s) 951, 1252
BstXI CCANNNNNNTGG 1 cut(s) 800
BstYI RGATCY 2 cut(s) 951, 1252
Bsu15I ATCGAT 1 cut(s) 1215
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 403
BsuRI GGCC 8 cut(s) 562, 601, 660, 959, 982, 1347, 1443, 1508
BsuTUI ATCGAT 1 cut(s) 1215
BtgI CCRYGG 3 cut(s) 1027, 1075, 1548
BtrI CACGTC 1 cut(s) 725
BtsCI GGATG 2 cut(s) 187, 766
BtsI GCAGTG 1 cut(s) 1414
BtsIMutI CAGTG 1 cut(s) 1414
Cac8I GCNNGC 2 cut(s) 1506, 1586
CfoI GCGC 1 cut(s) 1590
Cfr13I GGNCC 4 cut(s) 121, 536, 659, 981
ClaI ATCGAT 1 cut(s) 1215
CsiI ACCWGGT 1 cut(s) 792
Csp6I GTAC 2 cut(s) 637, 1058
CviAII CATG 6 cut(s) 170, 620, 1028, 1076, 1285, 1549
CviQI GTAC 2 cut(s) 637, 1058
DdeI CTNAG 7 cut(s) 117, 190, 312, 1233, 1266, 1308, 1416
DpnI GATC 8 cut(s) 186, 264, 867, 953, 1104, 1173, 1254, 1399
DpnII GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
EaeI YGGCCR 3 cut(s) 560, 1345, 1441
Eam1104I CTCTTC 5 cut(s) 67, 85, 147, 541, 916
EarI CTCTTC 5 cut(s) 67, 85, 147, 541, 916
Eco130I CCWWGG 3 cut(s) 1027, 1075, 1548
Eco147I AGGCCT 1 cut(s) 959
Eco31I GGTCTC 2 cut(s) 621, 1425
Eco47I GGWCC 2 cut(s) 121, 536
Eco57I CTGAAG 3 cut(s) 315, 831, 909
Eco81I CCTNAGG 1 cut(s) 117
EcoO109I RGGNCCY 2 cut(s) 121, 659
EcoRII CCWGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
EcoT14I CCWWGG 3 cut(s) 1027, 1075, 1548
ErhI CCWWGG 3 cut(s) 1027, 1075, 1548
FaeI CATG 6 cut(s) 173, 623, 1031, 1079, 1288, 1552
FalI AAGNNNNNCTT 4 cut(s) 25, 57, 46, 78
FaqI GGGAC 1 cut(s) 1168
FatI CATG 6 cut(s) 169, 619, 1027, 1075, 1284, 1548
FauI CCCGC 1 cut(s) 1145
FbaI TGATCA 1 cut(s) 262
FblI GTMKAC 1 cut(s) 933
Fnu4HI GCNGC 5 cut(s) 58, 1111, 1185, 1348, 1576
FokI GGATG 2 cut(s) 194, 773
Fsp4HI GCNGC 5 cut(s) 58, 1111, 1185, 1348, 1576
FspBI CTAG 6 cut(s) 6, 543, 576, 1302, 1395, 1572
GlaI GCGC 1 cut(s) 1589
GluI GCNGC 5 cut(s) 58, 1111, 1185, 1348, 1576
GsuI CTGGAG 2 cut(s) 776, 1410
HaeIII GGCC 8 cut(s) 562, 601, 660, 959, 982, 1347, 1443, 1508
HapII CCGG 1 cut(s) 327
HhaI GCGC 1 cut(s) 1590
Hin1I GRCGYC 1 cut(s) 581
Hin1II CATG 6 cut(s) 173, 623, 1031, 1079, 1288, 1552
Hin6I GCGC 1 cut(s) 1588
HinP1I GCGC 1 cut(s) 1588
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HindIII AAGCTT 2 cut(s) 1296, 1515
HinfI GANTC 7 cut(s) 10, 398, 806, 1355, 1448, 1491, 1544
HpaII CCGG 1 cut(s) 327
HphI GGTGA 5 cut(s) 391, 471, 576, 635, 1300
Hpy166II GTNNAC 4 cut(s) 388, 397, 437, 934
Hpy188I TCNGA 5 cut(s) 193, 373, 811, 967, 1252
Hpy188III TCNNGA 4 cut(s) 529, 543, 1256, 1389
Hpy8I GTNNAC 4 cut(s) 388, 397, 437, 934
HpyAV CCTTC 5 cut(s) 549, 612, 620, 884, 1389
HpyCH4III ACNGT 2 cut(s) 505, 1062
HpyCH4IV ACGT 3 cut(s) 581, 724, 1539
HpyCH4V TGCA 9 cut(s) 728, 788, 840, 909, 1127, 1223, 1319, 1471, 1504
HpyF10VI GCNNNNNNNGC 6 cut(s) 1149, 1193, 1229, 1304, 1514, 1581
HpyF3I CTNAG 7 cut(s) 117, 190, 312, 1233, 1266, 1308, 1416
HpySE526I ACGT 3 cut(s) 581, 724, 1539
Hsp92I GRCGYC 1 cut(s) 581
Hsp92II CATG 6 cut(s) 173, 623, 1031, 1079, 1288, 1552
HspAI GCGC 1 cut(s) 1588
Ksp22I TGATCA 1 cut(s) 262
Kzo9I GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
LguI GCTCTTC 3 cut(s) 67, 85, 541
LmnI GCTCC 3 cut(s) 157, 853, 1391
Lsp1109I GCAGC 2 cut(s) 1171, 1587
LweI GCATC 1 cut(s) 208
MabI ACCWGGT 1 cut(s) 792
MaeI CTAG 6 cut(s) 6, 543, 576, 1302, 1395, 1572
MaeII ACGT 3 cut(s) 581, 724, 1539
MaeIII GTNAC 8 cut(s) 93, 209, 307, 505, 582, 594, 1067, 1556
MalI GATC 8 cut(s) 186, 264, 867, 953, 1104, 1173, 1254, 1399
MbiI CCGCTC 1 cut(s) 60
MboI GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
MfeI CAATTG 1 cut(s) 766
MflI RGATCY 2 cut(s) 951, 1252
MlsI TGGCCA 2 cut(s) 562, 1443
MluCI AATT 8 cut(s) 196, 471, 490, 711, 766, 878, 1275, 1473
MluNI TGGCCA 2 cut(s) 562, 1443
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 2 cut(s) 72, 1545
Mox20I TGGCCA 2 cut(s) 562, 1443
MscI TGGCCA 2 cut(s) 562, 1443
MseI TTAA 5 cut(s) 108, 494, 1064, 1191, 1457
MslI CAYNNNNRTG 1 cut(s) 1289
Msp20I TGGCCA 2 cut(s) 562, 1443
MspCI CTTAAG 1 cut(s) 1456
MspI CCGG 1 cut(s) 327
MspR9I CCNGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
MunI CAATTG 1 cut(s) 766
Mva1269I GAATGC 1 cut(s) 756
MvaI CCWGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
MvnI CGCG 1 cut(s) 1152
MwoI GCNNNNNNNGC 6 cut(s) 1149, 1193, 1229, 1304, 1514, 1581
NcoI CCATGG 3 cut(s) 1027, 1075, 1548
NdeII GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
NlaIII CATG 6 cut(s) 173, 623, 1031, 1079, 1288, 1552
NlaIV GGNNCC 2 cut(s) 28, 159
NmeAIII GCCGAG 2 cut(s) 65, 107
NmuCI GTSAC 5 cut(s) 93, 209, 505, 582, 594
NspI RCATGY 1 cut(s) 173
PceI AGGCCT 1 cut(s) 959
PciI ACATGT 1 cut(s) 169
PciSI GCTCTTC 3 cut(s) 67, 85, 541
PctI GAATGC 1 cut(s) 756
PfeI GAWTC 6 cut(s) 10, 806, 1355, 1448, 1491, 1544
PflFI GACNNNGTC 1 cut(s) 929
PkrI GCNGC 5 cut(s) 59, 1112, 1186, 1349, 1577
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
PpuMI RGGWCCY 1 cut(s) 121
PscI ACATGT 1 cut(s) 169
PshBI ATTAAT 1 cut(s) 108
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
PspGI CCWGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
PspN4I GGNNCC 2 cut(s) 28, 159
PspPI GGNCC 4 cut(s) 121, 536, 659, 981
PspPPI RGGWCCY 1 cut(s) 121
PstI CTGCAG 1 cut(s) 1506
PsuI RGATCY 2 cut(s) 951, 1252
PsyI GACNNNGTC 1 cut(s) 929
RsaI GTAC 2 cut(s) 638, 1059
RsaNI GTAC 2 cut(s) 637, 1058
RseI CAYNNNNRTG 1 cut(s) 1289
SapI GCTCTTC 3 cut(s) 67, 85, 541
SaqAI TTAA 5 cut(s) 108, 494, 1064, 1191, 1457
SatI GCNGC 5 cut(s) 58, 1111, 1185, 1348, 1576
Sau3AI GATC 8 cut(s) 184, 262, 865, 951, 1102, 1171, 1252, 1397
Sau96I GGNCC 4 cut(s) 121, 536, 659, 981
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 7 cut(s) 559, 613, 794, 956, 1422, 1436, 1445
SexAI ACCWGGT 1 cut(s) 792
SfaNI GCATC 1 cut(s) 208
SfcI CTRYAG 2 cut(s) 1000, 1502
SinI GGWCC 2 cut(s) 121, 536
SmiMI CAYNNNNRTG 1 cut(s) 1289
SmlI CTYRAG 3 cut(s) 31, 1256, 1456
SmoI CTYRAG 3 cut(s) 31, 1256, 1456
Sse9I AATT 8 cut(s) 196, 471, 490, 711, 766, 878, 1275, 1473
SseBI AGGCCT 1 cut(s) 959
SsiI CCGC 5 cut(s) 58, 524, 1111, 1152, 1348
SspMI CTAG 6 cut(s) 6, 543, 576, 1302, 1395, 1572
StuI AGGCCT 1 cut(s) 959
StyD4I CCNGG 7 cut(s) 557, 611, 792, 954, 1420, 1434, 1443
StyI CCWWGG 3 cut(s) 1027, 1075, 1548
TaaI ACNGT 2 cut(s) 505, 1062
TaiI ACGT 3 cut(s) 584, 727, 1542
TaqI TCGA 2 cut(s) 1215, 1512
TasI AATT 8 cut(s) 196, 471, 490, 711, 766, 878, 1275, 1473
TauI GCSGC 3 cut(s) 60, 1113, 1350
TfiI GAWTC 6 cut(s) 10, 806, 1355, 1448, 1491, 1544
Tru1I TTAA 5 cut(s) 108, 494, 1064, 1191, 1457
Tru9I TTAA 5 cut(s) 108, 494, 1064, 1191, 1457
TscAI CASTG 1 cut(s) 1414
TseFI GTSAC 5 cut(s) 93, 209, 505, 582, 594
TseI GCWGC 2 cut(s) 1184, 1575
Tsp45I GTSAC 5 cut(s) 93, 209, 505, 582, 594
TspDTI ATGAA 4 cut(s) 300, 359, 977, 1371
TspGWI ACGGA 1 cut(s) 951
TspRI CASTG 1 cut(s) 1414
Tth111I GACNNNGTC 1 cut(s) 929
Vha464I CTTAAG 1 cut(s) 1456
VpaK11BI GGWCC 2 cut(s) 121, 536
VspI ATTAAT 1 cut(s) 108
XapI RAATTY 2 cut(s) 471, 490
XbaI TCTAGA 1 cut(s) 542
XceI RCATGY 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 933
XspI CTAG 6 cut(s) 6, 543, 576, 1302, 1395, 1572
ZraI GACGTC 1 cut(s) 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.