Rh5CG342900

OTU domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003236
Physical Location & Seq
Reverse (-)
39349070 .. 39356900
7831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG342900.1

Sequence Viewer

Length: 1620 bp
ATGACTAGGATTCTGGTTCAGCGAGGTTCCTCAAGTGGTTCTTCTTCCAACCCAAGCCGCTCTTCTTCCTTGTCTGGCTCTTCCTCGGCTTGGTCACAGCCACAGATTAATACTCCTCAGGTCCTCTCGGCTGTGAAAGATGAGGAGATTGAAGAGGAGCCACAGGAACATGTTATTGTGGATGATCCCTCAGAGAATTGTGGGATTAGTGACAATAATGCCGTGAAAAATGATGATGTTTTGATGGAATTGATGGAAAGCACTCATAATGATCACACTCTAAGTTCAAGTGATGAACTTACTGAAGTTGAGAGGGTTACTAAGAATGATATTGCCGGACAAGGGGAGTTGATGAAAGGTTTAGGCAGTTTGACAATATCTGAAAGGGTGAAAGTTGACAATGTGGACTCTGGTGGGGATACTTTACAAAATGTCATTGGGAGTTCACAGCCACCTCCTCCTCCTGTTCCTCCCCCAAAAATTTCTTCACCAAACTCAAATTCAAGGAGAACTGTCACAGGAAGTTCAACTGCGGTCAGGATTGGACCTTCAAGAAGAGCAGTTGCCTGGCCAGTTGTGTCAACTAGGACGTCACCAACTGGGTCACGGCCTTCTTCTCCCAGGTCTCATGGTGAAGGCGAGGGGTACAATAGTGCCGATGAGCAAGGCCCTTGCTTTGTGTCCTCCTATGACGATATGGAAAGGGAACGGCAGTTTGAAATTGATATTAGACGTGCAAAAGGGTTTGAAGTGAAAAGAATGCTGGAGGATGGCAATTGTCTGTTTCGTGCTGTTGCAGACCAGGTTTATGGGGATTCTGAAGCGTACGACTTGACCAGACAAATGTGCATAGATTATATGGAGCGAGAGAGGGATCATTTTTCTCAATTTATTACAGAAGGATTTACTTCTTATTGCAAGAGGAAAAGAAGAGACAAGGTCTACGGAAATAATGTGGAGATCCAGGCCTTATCTGAAATGTATAATCGGCCCATCCATATTTATTCCTATAGCATTGAACCTATCAATATCTTCCATGGAAGTTATAATACTGACACACCACCTGTACGGTTAAGTTACCACCATGGAAATCATTACAACTCTCTTGTTGATCCTCGCCGCTTGACCATTGGTGCAGGACTTGGGTTCAGCAGTCTTCGCGGGACAAATGCTGACAAGGATCAGGTCAAGGCTGCAATTAAGGCTCAACAAGACCAACAAATCGATAATGCACTTTTAGCTGAGGGGCGATTTTACTCGGATCTTGAGCTTACTGAGAAAGAAATTGAACGCATGGTGATGGAAGCTTCTAGGGCTGAGTATCTTGCAGATGGCACATTCAAGCAACAACTTGGCCGCAGAGAATCTTCTACTTCAGGCTGTGAGCCTTCATCTTCTGGAGCTAGATCATCAGGCAGTGAGACTAAGCCAGGGGGTAGAGACCAGGGTGGCCAGGATTCCACCTTAAGCAGTAGTATGCAAATTGTTCTGTCGATGGGATTCAGCTATCTGCAGGCCATCGAAGCTTACAGCATATTTGGAGATGACGTAGATTCCATGGTTTGTTACTTGTTGGAAACTAGCAGCAGTAGCAGGCGCAAAGGCAAGGCAACAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04622 map04622
Pfam Domains
Protein Families
OTU

Protein Analysis

539

Amino Acids

59.3

Weight (kDa)

5.09

Isoelectric Point (pI)

59.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OTU PF02338 257 - 366 3.7e-17 OTU-like cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1047
AatII GACGTC 1 cut(s) 593
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 1 cut(s) 942
AccII CGCG 1 cut(s) 1161
AciI CCGC 5 cut(s) 58, 533, 1120, 1161, 1357
AclWI GGATC 6 cut(s) 179, 882, 955, 1106, 1188, 1269
AcoI YGGCCR 3 cut(s) 569, 1354, 1450
AcsI RAATTY 2 cut(s) 480, 499
AcuI CTGAAG 3 cut(s) 324, 840, 1359
AcyI GRCGYC 1 cut(s) 590
AfaI GTAC 3 cut(s) 647, 827, 1068
AfiI CCNNNNNNNGG 2 cut(s) 90, 342
AflII CTTAAG 1 cut(s) 1465
AflIII ACRYGT 1 cut(s) 169
AjiI CACGTC 1 cut(s) 734
AjnI CCWGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
AjuI GAANNNNNNNTTGG 6 cut(s) 46, 78, 469, 484, 501, 516
AluBI AGCT 6 cut(s) 1241, 1270, 1307, 1403, 1506, 1526
AluI AGCT 6 cut(s) 1241, 1270, 1307, 1403, 1506, 1526
Alw26I GTCTC 4 cut(s) 630, 927, 1415, 1434
AlwI GGATC 6 cut(s) 179, 882, 955, 1106, 1188, 1269
AoxI GGCC 8 cut(s) 569, 608, 667, 966, 989, 1354, 1450, 1515
ApeKI GCWGC 2 cut(s) 1193, 1584
ApoI RAATTY 2 cut(s) 480, 499
AseI ATTAAT 1 cut(s) 108
AspLEI GCGC 1 cut(s) 1599
AspS9I GGNCC 4 cut(s) 121, 545, 668, 990
AsuHPI GGTGA 5 cut(s) 400, 480, 585, 644, 1309
AvaII GGWCC 2 cut(s) 121, 545
AxyI CCTNAGG 1 cut(s) 117
BaeI ACNNNNGTAYC 2 cut(s) 637, 670
BalI TGGCCA 2 cut(s) 571, 1452
BarI GAAGNNNNNNTAC 2 cut(s) 1033, 1065
BbsI GAAGAC 1 cut(s) 1148
BbvCI CCTCAGC 1 cut(s) 1242
BbvI GCAGC 2 cut(s) 1180, 1596
BccI CCATC 8 cut(s) 238, 247, 764, 1001, 1294, 1325, 1489, 1526
BceAI ACGGC 3 cut(s) 206, 623, 725
BciT130I CCWGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
BciVI GTATCC 1 cut(s) 412
BclI TGATCA 1 cut(s) 271
BcoDI GTCTC 4 cut(s) 630, 927, 1415, 1434
BfaI CTAG 5 cut(s) 6, 585, 1311, 1404, 1581
BfmI CTRYAG 2 cut(s) 1009, 1511
BfrI CTTAAG 1 cut(s) 1465
BfuI GTATCC 1 cut(s) 412
BisI GCNGC 5 cut(s) 58, 1120, 1194, 1357, 1585
BlsI GCNGC 5 cut(s) 59, 1121, 1195, 1358, 1586
Bme1390I CCNGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
Bme18I GGWCC 2 cut(s) 121, 545
BmgBI CACGTC 1 cut(s) 734
BmgT120I GGNCC 4 cut(s) 121, 545, 668, 990
BmiI GGNNCC 2 cut(s) 28, 159
BmrFI CCNGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
BmrI ACTGGG 1 cut(s) 609
BmuI ACTGGG 1 cut(s) 609
BpiI GAAGAC 1 cut(s) 1148
BpmI CTGGAG 2 cut(s) 785, 1419
Bpu10I CCTNAGC 1 cut(s) 1242
BpuEI CTTGAG 2 cut(s) 16, 1286
Bsa29I ATCGAT 1 cut(s) 1224
BsaHI GRCGYC 1 cut(s) 590
BsaI GGTCTC 2 cut(s) 630, 1434
BsaJI CCNNGG 7 cut(s) 84, 620, 1036, 1084, 1430, 1444, 1557
BsaXI ACNNNNNCTCC 2 cut(s) 1533, 1563
Bsc4I CCNNNNNNNGG 2 cut(s) 90, 342
Bse1I ACTGG 2 cut(s) 572, 604
Bse21I CCTNAGG 1 cut(s) 117
BseBI CCWGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
BseCI ATCGAT 1 cut(s) 1224
BseDI CCNNGG 7 cut(s) 84, 620, 1036, 1084, 1430, 1444, 1557
BseGI GGATG 3 cut(s) 187, 775, 993
BseLI CCNNNNNNNGG 2 cut(s) 90, 342
BseMII CTCAG 5 cut(s) 131, 204, 1233, 1266, 1308
BseNI ACTGG 2 cut(s) 572, 604
BseRI GAGGAG 5 cut(s) 105, 158, 170, 447, 450
BseXI GCAGC 2 cut(s) 1180, 1596
BsgI GTGCAG 1 cut(s) 1155
Bsh1236I CGCG 1 cut(s) 1161
BshFI GGCC 8 cut(s) 571, 610, 669, 968, 991, 1356, 1452, 1517
BshVI ATCGAT 1 cut(s) 1224
BsiSI CCGG 1 cut(s) 336
BsiWI CGTACG 1 cut(s) 825
BslFI GGGAC 1 cut(s) 1177
BslI CCNNNNNNNGG 2 cut(s) 90, 342
BsmAI GTCTC 4 cut(s) 630, 927, 1415, 1434
BsmFI GGGAC 1 cut(s) 1177
BsmI GAATGC 1 cut(s) 765
BsnI GGCC 8 cut(s) 571, 610, 669, 968, 991, 1356, 1452, 1517
Bso31I GGTCTC 2 cut(s) 630, 1434
Bsp143I GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
Bsp19I CCATGG 3 cut(s) 1036, 1084, 1557
BspACI CCGC 5 cut(s) 58, 533, 1120, 1161, 1357
BspANI GGCC 8 cut(s) 571, 610, 669, 968, 991, 1356, 1452, 1517
BspCNI CTCAG 5 cut(s) 130, 203, 1234, 1267, 1309
BspDI ATCGAT 1 cut(s) 1224
BspFNI CGCG 1 cut(s) 1161
BspLI GGNNCC 2 cut(s) 28, 159
BspMAI CTGCAG 1 cut(s) 1515
BspPI GGATC 6 cut(s) 179, 882, 955, 1106, 1188, 1269
BspQI GCTCTTC 3 cut(s) 67, 85, 550
BspTI CTTAAG 1 cut(s) 1465
BspTNI GGTCTC 2 cut(s) 630, 1434
BsrBI CCGCTC 1 cut(s) 60
BsrI ACTGG 2 cut(s) 572, 604
BssECI CCNNGG 7 cut(s) 84, 620, 1036, 1084, 1430, 1444, 1557
BssMI GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
BssNI GRCGYC 1 cut(s) 590
BssT1I CCWWGG 3 cut(s) 1036, 1084, 1557
Bst2UI CCWGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
Bst4CI ACNGT 2 cut(s) 514, 1071
Bst6I CTCTTC 5 cut(s) 67, 85, 147, 550, 925
BstACI GRCGYC 1 cut(s) 590
BstAFI CTTAAG 1 cut(s) 1465
BstC8I GCNNGC 2 cut(s) 1515, 1595
BstDEI CTNAG 8 cut(s) 117, 190, 281, 321, 1242, 1275, 1317, 1425
BstDSI CCRYGG 3 cut(s) 1036, 1084, 1557
BstF5I GGATG 3 cut(s) 187, 775, 993
BstFNI CGCG 1 cut(s) 1161
BstHHI GCGC 1 cut(s) 1599
BstKTI GATC 8 cut(s) 187, 274, 877, 963, 1114, 1183, 1264, 1409
BstMAI GTCTC 4 cut(s) 630, 927, 1415, 1434
BstMBI GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
BstMWI GCNNNNNNNGC 6 cut(s) 1158, 1202, 1238, 1313, 1523, 1590
BstNI CCWGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
BstNSI RCATGY 1 cut(s) 173
BstSCI CCNGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
BstSFI CTRYAG 2 cut(s) 1009, 1511
BstUI CGCG 1 cut(s) 1161
BstV1I GCAGC 2 cut(s) 1180, 1596
BstV2I GAAGAC 1 cut(s) 1148
BstX2I RGATCY 2 cut(s) 960, 1261
BstXI CCANNNNNNTGG 1 cut(s) 809
BstYI RGATCY 2 cut(s) 960, 1261
Bsu15I ATCGAT 1 cut(s) 1224
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 412
BsuRI GGCC 8 cut(s) 571, 610, 669, 968, 991, 1356, 1452, 1517
BsuTUI ATCGAT 1 cut(s) 1224
BtgI CCRYGG 3 cut(s) 1036, 1084, 1557
BtrI CACGTC 1 cut(s) 734
BtsCI GGATG 3 cut(s) 187, 775, 993
BtsI GCAGTG 1 cut(s) 1423
BtsIMutI CAGTG 1 cut(s) 1423
Cac8I GCNNGC 2 cut(s) 1515, 1595
CfoI GCGC 1 cut(s) 1599
Cfr13I GGNCC 4 cut(s) 121, 545, 668, 990
ClaI ATCGAT 1 cut(s) 1224
CsiI ACCWGGT 1 cut(s) 801
Csp6I GTAC 3 cut(s) 646, 826, 1067
CviAII CATG 6 cut(s) 170, 629, 1037, 1085, 1294, 1558
CviQI GTAC 3 cut(s) 646, 826, 1067
DdeI CTNAG 8 cut(s) 117, 190, 281, 321, 1242, 1275, 1317, 1425
DpnI GATC 8 cut(s) 186, 273, 876, 962, 1113, 1182, 1263, 1408
DpnII GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
EaeI YGGCCR 3 cut(s) 569, 1354, 1450
Eam1104I CTCTTC 5 cut(s) 67, 85, 147, 550, 925
EarI CTCTTC 5 cut(s) 67, 85, 147, 550, 925
Eco130I CCWWGG 3 cut(s) 1036, 1084, 1557
Eco147I AGGCCT 1 cut(s) 968
Eco31I GGTCTC 2 cut(s) 630, 1434
Eco47I GGWCC 2 cut(s) 121, 545
Eco57I CTGAAG 3 cut(s) 324, 840, 1359
Eco81I CCTNAGG 1 cut(s) 117
EcoO109I RGGNCCY 2 cut(s) 121, 668
EcoRII CCWGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
EcoT14I CCWWGG 3 cut(s) 1036, 1084, 1557
ErhI CCWWGG 3 cut(s) 1036, 1084, 1557
FaeI CATG 6 cut(s) 173, 632, 1040, 1088, 1297, 1561
FalI AAGNNNNNCTT 4 cut(s) 25, 57, 46, 78
FaqI GGGAC 1 cut(s) 1177
FatI CATG 6 cut(s) 169, 628, 1036, 1084, 1293, 1557
FauI CCCGC 1 cut(s) 1154
FbaI TGATCA 1 cut(s) 271
FblI GTMKAC 1 cut(s) 942
Fnu4HI GCNGC 5 cut(s) 58, 1120, 1194, 1357, 1585
FokI GGATG 3 cut(s) 194, 782, 980
Fsp4HI GCNGC 5 cut(s) 58, 1120, 1194, 1357, 1585
FspBI CTAG 5 cut(s) 6, 585, 1311, 1404, 1581
GlaI GCGC 1 cut(s) 1598
GluI GCNGC 5 cut(s) 58, 1120, 1194, 1357, 1585
GsuI CTGGAG 2 cut(s) 785, 1419
HaeIII GGCC 8 cut(s) 571, 610, 669, 968, 991, 1356, 1452, 1517
HapII CCGG 1 cut(s) 336
HhaI GCGC 1 cut(s) 1599
Hin1I GRCGYC 1 cut(s) 590
Hin1II CATG 6 cut(s) 173, 632, 1040, 1088, 1297, 1561
Hin6I GCGC 1 cut(s) 1597
HinP1I GCGC 1 cut(s) 1597
HincII GTYRAC 2 cut(s) 397, 582
HindII GTYRAC 2 cut(s) 397, 582
HindIII AAGCTT 2 cut(s) 1305, 1524
HinfI GANTC 7 cut(s) 10, 407, 815, 1364, 1457, 1500, 1553
HpaII CCGG 1 cut(s) 336
HphI GGTGA 5 cut(s) 400, 480, 585, 644, 1309
Hpy166II GTNNAC 5 cut(s) 397, 406, 446, 582, 943
Hpy188I TCNGA 5 cut(s) 193, 382, 820, 976, 1261
Hpy188III TCNNGA 4 cut(s) 538, 552, 1265, 1398
Hpy8I GTNNAC 5 cut(s) 397, 406, 446, 582, 943
HpyAV CCTTC 5 cut(s) 558, 621, 629, 893, 1398
HpyCH4III ACNGT 2 cut(s) 514, 1071
HpyCH4IV ACGT 3 cut(s) 590, 733, 1548
HpyF10VI GCNNNNNNNGC 6 cut(s) 1158, 1202, 1238, 1313, 1523, 1590
HpyF3I CTNAG 8 cut(s) 117, 190, 281, 321, 1242, 1275, 1317, 1425
HpySE526I ACGT 3 cut(s) 590, 733, 1548
Hsp92I GRCGYC 1 cut(s) 590
Hsp92II CATG 6 cut(s) 173, 632, 1040, 1088, 1297, 1561
HspAI GCGC 1 cut(s) 1597
Ksp22I TGATCA 1 cut(s) 271
Kzo9I GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
LguI GCTCTTC 3 cut(s) 67, 85, 550
LmnI GCTCC 3 cut(s) 157, 862, 1400
Lsp1109I GCAGC 2 cut(s) 1180, 1596
MabI ACCWGGT 1 cut(s) 801
MaeI CTAG 5 cut(s) 6, 585, 1311, 1404, 1581
MaeII ACGT 3 cut(s) 590, 733, 1548
MaeIII GTNAC 8 cut(s) 93, 209, 316, 514, 591, 603, 1076, 1565
MalI GATC 8 cut(s) 186, 273, 876, 962, 1113, 1182, 1263, 1408
MbiI CCGCTC 1 cut(s) 60
MboI GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
MfeI CAATTG 1 cut(s) 775
MflI RGATCY 2 cut(s) 960, 1261
MlsI TGGCCA 2 cut(s) 571, 1452
MluNI TGGCCA 2 cut(s) 571, 1452
MlyI GAGTC 1 cut(s) 401
MmeI TCCRAC 2 cut(s) 72, 1554
Mox20I TGGCCA 2 cut(s) 571, 1452
MscI TGGCCA 2 cut(s) 571, 1452
MseI TTAA 4 cut(s) 108, 1073, 1200, 1466
MslI CAYNNNNRTG 1 cut(s) 1298
Msp20I TGGCCA 2 cut(s) 571, 1452
MspCI CTTAAG 1 cut(s) 1465
MspI CCGG 1 cut(s) 336
MspR9I CCNGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
MunI CAATTG 1 cut(s) 775
Mva1269I GAATGC 1 cut(s) 765
MvaI CCWGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
MvnI CGCG 1 cut(s) 1161
MwoI GCNNNNNNNGC 6 cut(s) 1158, 1202, 1238, 1313, 1523, 1590
NcoI CCATGG 3 cut(s) 1036, 1084, 1557
NdeII GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
NlaIII CATG 6 cut(s) 173, 632, 1040, 1088, 1297, 1561
NlaIV GGNNCC 2 cut(s) 28, 159
NmeAIII GCCGAG 2 cut(s) 65, 107
NmuCI GTSAC 5 cut(s) 93, 209, 514, 591, 603
NspI RCATGY 1 cut(s) 173
PceI AGGCCT 1 cut(s) 968
PciI ACATGT 1 cut(s) 169
PciSI GCTCTTC 3 cut(s) 67, 85, 550
PctI GAATGC 1 cut(s) 765
PfeI GAWTC 6 cut(s) 10, 815, 1364, 1457, 1500, 1553
Pfl23II CGTACG 1 cut(s) 825
PflFI GACNNNGTC 1 cut(s) 938
PkrI GCNGC 5 cut(s) 59, 1121, 1195, 1358, 1586
PleI GAGTC 1 cut(s) 401
PpsI GAGTC 1 cut(s) 401
PpuMI RGGWCCY 1 cut(s) 121
PscI ACATGT 1 cut(s) 169
PshBI ATTAAT 1 cut(s) 108
PsiI TTATAA 1 cut(s) 1047
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
PspGI CCWGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
PspLI CGTACG 1 cut(s) 825
PspN4I GGNNCC 2 cut(s) 28, 159
PspPI GGNCC 4 cut(s) 121, 545, 668, 990
PspPPI RGGWCCY 1 cut(s) 121
PstI CTGCAG 1 cut(s) 1515
PsuI RGATCY 2 cut(s) 960, 1261
PsyI GACNNNGTC 1 cut(s) 938
RsaI GTAC 3 cut(s) 647, 827, 1068
RsaNI GTAC 3 cut(s) 646, 826, 1067
RseI CAYNNNNRTG 1 cut(s) 1298
SapI GCTCTTC 3 cut(s) 67, 85, 550
SaqAI TTAA 4 cut(s) 108, 1073, 1200, 1466
SatI GCNGC 5 cut(s) 58, 1120, 1194, 1357, 1585
Sau3AI GATC 8 cut(s) 184, 271, 874, 960, 1111, 1180, 1261, 1406
Sau96I GGNCC 4 cut(s) 121, 545, 668, 990
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 7 cut(s) 568, 622, 803, 965, 1431, 1445, 1454
SexAI ACCWGGT 1 cut(s) 801
SfcI CTRYAG 2 cut(s) 1009, 1511
SinI GGWCC 2 cut(s) 121, 545
SmiMI CAYNNNNRTG 1 cut(s) 1298
SmlI CTYRAG 3 cut(s) 31, 1265, 1465
SmoI CTYRAG 3 cut(s) 31, 1265, 1465
SseBI AGGCCT 1 cut(s) 968
SsiI CCGC 5 cut(s) 58, 533, 1120, 1161, 1357
SspMI CTAG 5 cut(s) 6, 585, 1311, 1404, 1581
StuI AGGCCT 1 cut(s) 968
StyD4I CCNGG 7 cut(s) 566, 620, 801, 963, 1429, 1443, 1452
StyI CCWWGG 3 cut(s) 1036, 1084, 1557
TaaI ACNGT 2 cut(s) 514, 1071
TaiI ACGT 3 cut(s) 593, 736, 1551
TaqI TCGA 3 cut(s) 1224, 1493, 1521
TauI GCSGC 3 cut(s) 60, 1122, 1359
TfiI GAWTC 6 cut(s) 10, 815, 1364, 1457, 1500, 1553
Tru1I TTAA 4 cut(s) 108, 1073, 1200, 1466
Tru9I TTAA 4 cut(s) 108, 1073, 1200, 1466
TscAI CASTG 1 cut(s) 1423
TseFI GTSAC 5 cut(s) 93, 209, 514, 591, 603
TseI GCWGC 2 cut(s) 1193, 1584
Tsp45I GTSAC 5 cut(s) 93, 209, 514, 591, 603
TspDTI ATGAA 3 cut(s) 309, 368, 1380
TspGWI ACGGA 1 cut(s) 960
TspRI CASTG 1 cut(s) 1423
Tth111I GACNNNGTC 1 cut(s) 938
Vha464I CTTAAG 1 cut(s) 1465
VpaK11BI GGWCC 2 cut(s) 121, 545
VspI ATTAAT 1 cut(s) 108
XapI RAATTY 2 cut(s) 480, 499
XceI RCATGY 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 942
XspI CTAG 5 cut(s) 6, 585, 1311, 1404, 1581
ZraI GACGTC 1 cut(s) 591
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.