Rorug05G0227100

OTU domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003236
Physical Location & Seq
Forward (+)
23587387 .. 23590068
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0227100.1

Sequence Viewer

Length: 1995 bp
ATGACGTTAGCAACGGCTGCCGTTGCTGACGTCATGCTTGCAAAACATTTCACCCCAACCGTGTTGAAAAATGGAGATGTTGGAGATGTACTGGTTCGAGCAGTAGTGGGATTTTTGCCAGTAGTGTCAAGTGTCAACAACACTCTATCTCTGGAGGGAGATGCTTTTATCGACGGCAAACTCCTCCGTCTCACCAAAAGCGATCTAGAAGACTCACAAAACGCGAGCGTTGGTCGAGCCACCTACACACAGCCCTTCCTCCTCCGCGAAAGTGCCACCGGAAACCTAGCCGATTTCAGCACAAGTTTCACATTCGCCATCAACTCTCAAAACAGAAACTCTTACGGAGAGGGGCTCGCCTTCTTCCTAGCTCCACAAGGAACCTCTCTACGTAACAGCTCAGCCGCATCTGGTGGTAGTCTCGGCCTCCCTGTCAACAGTACCCTTTCAAATGAGTACCCCTATGTGGCGGTGGAGTTTGACATCTTCCAGAGTGAAAATACAGCCATCGGAGATCCCAGCTACCCATACGGTCATGTGGGTGTCGACGTCAGCTCTCTCAAATCCGTTATCACCAAGCCTTGGTATGTAAGTATGAAGGAAGGACAGCAAAGTAATAGTGCTAAGATTAGTTATAGTTCTGGCACAAAAAATCTTAGCGTGGCCTTCACCACTTATGATGATCTGAGTGGTATCCAAGTAATCAGTTATTTTTCTTACGAACTAGATCTGAAAAAATACTTGCCGGATTGGGTTGTTGTTGGGTTCTCGGCTTCGACGGGGAGGTCTATTACTCTGCATAACATTATCTCTTGGAATTTTTCTTCAACTTCGCTTGTTGACTATGATTTGTCTCTAGTTCCTGCGCCAGGCCTTACTTCTAAAGTCAAGCCCAGAAAGGACAATAAACATCTAGTTCTTGTTATTGGTGGTGTTGTTGGGGGATTTATGCTGGTTGGTGTGTTAGGTTTGGGTTTGTTCAACTCTTGCAAGAGAATGGCAACAGGAAATAGTAGTACTGAAATAGAGGGCCTGAGGAGGTTTTCTTATGGTGAAATAGCTTTGGCGACAAGAAATTTTGCCGAGGGAGAAAAGCTTGGAGAGGGAGTAGATGGTAAGGTTTACAAAGGCTTCAGATATGACTTGAACTCGTATGTTACGGTTAAGAGGATGTCCAAGGGATCTACACAAAGGAAGGAGTATAAATCAGACTTGAGAATCCTGAGTAAACTACATCATCGGAATCTGATGCGACTAATTGGTTGGTGCGACGAACAAGGAGAACTAATACTTGTTTACGAGTTCATGCCGAAGGGAAGCTTAGATATCCATTTACTCAAAGCAGACAACTTGTTGATTTGGGAGGTCAGATATAAAATTGCTCAAGATTTGGCCTCCGCGTTGCTATATCTACACGAATATTCAGGGGTACCATGTGTTCATAGGAATATCCAACCTAGCAGTATTATGTTGGATTCGAATTTGGAAGCAAAACTTGGAAATTTTATGTTTACTGAACTTGTGCATGAAGAATCACAAACTACACTTGTGGTTGGAACAGTGGGCTACCTAGATCCAGCATATTCAATGACAGGAAAGACAAGCAAGATGTCAGATGTTTACAGTTTTGGTGTTGTTGCTTTGGAGATAGCATGCGGGAGAAAACCTACGGAGCCCAATTTTGAAGAGAATCAAATCTATTTGGTGGAATGGGTTTGGGAGCTGTACAGAGAAGGGAAAATTATTGAAGCAGCGGACCCAAAACTGCGTGGAGATTTTGATAAGAAACAAATGGAGTGCTTGATGGTTGTTGGGTTGTGGTGTGCTCGCTCTGCCTTTCGTTTCAGGCCTTCAATAGACGAGGCGATTCAAGTTCTTAACTTTGAAGCTCCATTGCCGCTTCTCATCCTGTCAAATGACACTACAGGTTCAAGTTCTGAAAGAAGTACAAGTGAGTCTTCCAACATCGATGGTGATAGCGCCAATTCCTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04622 map04622
Pfam Domains
Protein Families
OTU

Protein Analysis

664

Amino Acids

72.91

Weight (kDa)

5.56

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 45 - 278 1.7e-57 Legume lectin domain
Lectin_L-type_dom PF18483 45 - 269 7.6e-09 Legume lectin beta-barrel domain
Pkinase PF00069 361 - 562 4.6e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 560 1.4e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 784
AatII GACGTC 2 cut(s) 33, 552
Acc65I GGTACC 1 cut(s) 1429
AccB1I GGYRCC 1 cut(s) 1429
AccB7I CCANNNNNTGG 1 cut(s) 582
AccI GTMKAC 1 cut(s) 546
AccII CGCG 3 cut(s) 224, 267, 1400
AciI CCGC 7 cut(s) 265, 405, 470, 1398, 1656, 1754, 1898
AclWI GGATC 3 cut(s) 509, 1189, 1568
AcsI RAATTY 4 cut(s) 817, 1075, 1480, 1501
AcuI CTGAAG 1 cut(s) 1117
AcyI GRCGYC 2 cut(s) 30, 549
AfaI GTAC 7 cut(s) 90, 442, 458, 1018, 1431, 1727, 1948
AfiI CCNNNNNNNGG 3 cut(s) 466, 582, 869
AjnI CCWGG 1 cut(s) 868
AjuI GAANNNNNNNTTGG 2 cut(s) 1479, 1511
AluBI AGCT 9 cut(s) 371, 399, 522, 555, 1061, 1096, 1320, 1723, 1889
AluI AGCT 9 cut(s) 371, 399, 522, 555, 1061, 1096, 1320, 1723, 1889
Alw21I GWGCWC 1 cut(s) 1828
Alw26I GTCTC 3 cut(s) 194, 425, 858
AlwI GGATC 3 cut(s) 509, 1189, 1568
AoxI GGCC 6 cut(s) 424, 663, 871, 1030, 1392, 1847
ApeKI GCWGC 2 cut(s) 17, 1751
ApoI RAATTY 4 cut(s) 817, 1075, 1480, 1501
Asp718I GGTACC 1 cut(s) 1429
AspLEI GCGC 2 cut(s) 868, 1982
AspS9I GGNCC 2 cut(s) 1030, 1756
AsuHPI GGTGA 6 cut(s) 43, 184, 565, 661, 1064, 1985
AsuII TTCGAA 1 cut(s) 1478
AvaII GGWCC 1 cut(s) 1756
AxyI CCTNAGG 1 cut(s) 1034
BanI GGYRCC 1 cut(s) 1429
BanII GRGCYC 2 cut(s) 357, 1677
BbsI GAAGAC 2 cut(s) 216, 1950
Bbv12I GWGCWC 1 cut(s) 1828
BbvI GCAGC 2 cut(s) 4, 1763
BccI CCATC 5 cut(s) 326, 515, 1106, 1798, 1964
BceAI ACGGC 3 cut(s) 5, 30, 190
BciT130I CCWGG 1 cut(s) 870
BciVI GTATCC 1 cut(s) 704
BcoDI GTCTC 3 cut(s) 194, 425, 858
BfaI CTAG 8 cut(s) 206, 287, 368, 725, 857, 914, 1458, 1571
BfmI CTRYAG 1 cut(s) 1923
BfoI RGCGCY 1 cut(s) 1983
BfuI GTATCC 1 cut(s) 704
BglII AGATCT 1 cut(s) 727
BisI GCNGC 4 cut(s) 18, 405, 1752, 1898
BlpI GCTNAGC 1 cut(s) 400
BlsI GCNGC 4 cut(s) 19, 406, 1753, 1899
BmcAI AGTACT 1 cut(s) 1018
Bme1390I CCNGG 1 cut(s) 870
Bme18I GGWCC 1 cut(s) 1756
BmgT120I GGNCC 2 cut(s) 1030, 1756
BmiI GGNNCC 4 cut(s) 382, 1431, 1674, 1758
BmrFI CCNGG 1 cut(s) 870
BmsI GCATC 3 cut(s) 151, 416, 1239
BpiI GAAGAC 2 cut(s) 216, 1950
BplI GAGNNNNNCTC 2 cut(s) 339, 371
BpmI CTGGAG 1 cut(s) 173
Bpu1102I GCTNAGC 1 cut(s) 400
Bpu14I TTCGAA 1 cut(s) 1478
BpuEI CTTGAG 2 cut(s) 1234, 1368
Bsa29I ATCGAT 1 cut(s) 1968
BsaAI YACGTR 1 cut(s) 392
BsaHI GRCGYC 2 cut(s) 30, 549
BsaJI CCNNGG 3 cut(s) 581, 1083, 1176
BsaWI WCCGGW 1 cut(s) 278
BsaXI ACNNNNNCTCC 2 cut(s) 1092, 1122
Bsc4I CCNNNNNNNGG 3 cut(s) 466, 582, 869
Bse1I ACTGG 2 cut(s) 96, 119
Bse21I CCTNAGG 1 cut(s) 1034
Bse3DI GCAATG 1 cut(s) 1892
BseBI CCWGG 1 cut(s) 870
BseCI ATCGAT 1 cut(s) 1968
BseDI CCNNGG 3 cut(s) 581, 1083, 1176
BseGI GGATG 2 cut(s) 1176, 1905
BseLI CCNNNNNNNGG 3 cut(s) 466, 582, 869
BseMI GCAATG 1 cut(s) 1892
BseMII CTCAG 4 cut(s) 414, 677, 1025, 1214
BseNI ACTGG 2 cut(s) 96, 119
BseRI GAGGAG 3 cut(s) 173, 251, 1051
BseXI GCAGC 2 cut(s) 4, 1763
BseYI CCCAGC 1 cut(s) 518
Bsh1236I CGCG 3 cut(s) 224, 267, 1400
BshFI GGCC 6 cut(s) 426, 665, 873, 1032, 1394, 1849
BshNI GGYRCC 1 cut(s) 1429
BshVI ATCGAT 1 cut(s) 1968
BsiHKAI GWGCWC 1 cut(s) 1828
BsiSI CCGG 2 cut(s) 279, 746
BslI CCNNNNNNNGG 3 cut(s) 466, 582, 869
BsmAI GTCTC 3 cut(s) 194, 425, 858
BsmBI CGTCTC 1 cut(s) 194
BsnI GGCC 6 cut(s) 426, 665, 873, 1032, 1394, 1849
Bsp119I TTCGAA 1 cut(s) 1478
Bsp1286I GDGCHC 3 cut(s) 357, 1677, 1828
Bsp1407I TGTACA 1 cut(s) 1725
Bsp143I GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
Bsp1720I GCTNAGC 1 cut(s) 400
BspACI CCGC 7 cut(s) 265, 405, 470, 1398, 1656, 1754, 1898
BspANI GGCC 6 cut(s) 426, 665, 873, 1032, 1394, 1849
BspCNI CTCAG 4 cut(s) 413, 678, 1026, 1215
BspDI ATCGAT 1 cut(s) 1968
BspFNI CGCG 3 cut(s) 224, 267, 1400
BspLI GGNNCC 4 cut(s) 382, 1431, 1674, 1758
BspPI GGATC 3 cut(s) 509, 1189, 1568
BspT104I TTCGAA 1 cut(s) 1478
BspT107I GGYRCC 1 cut(s) 1429
BsrDI GCAATG 1 cut(s) 1892
BsrGI TGTACA 1 cut(s) 1725
BsrI ACTGG 2 cut(s) 96, 119
BssECI CCNNGG 3 cut(s) 581, 1083, 1176
BssMI GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
BssNI GRCGYC 2 cut(s) 30, 549
BssT1I CCWWGG 2 cut(s) 581, 1176
Bst2UI CCWGG 1 cut(s) 870
Bst4CI ACNGT 6 cut(s) 61, 440, 533, 1162, 1561, 1625
Bst6I CTCTTC 1 cut(s) 1680
BstACI GRCGYC 2 cut(s) 30, 549
BstAPI GCANNNNNTGC 1 cut(s) 17
BstAUI TGTACA 1 cut(s) 1725
BstBAI YACGTR 1 cut(s) 392
BstBI TTCGAA 1 cut(s) 1478
BstC8I GCNNGC 5 cut(s) 39, 226, 357, 1654, 1828
BstDEI CTNAG 7 cut(s) 400, 624, 656, 686, 1034, 1223, 1321
BstENI CCTNNNNNAGG 1 cut(s) 867
BstF5I GGATG 2 cut(s) 1176, 1905
BstFNI CGCG 3 cut(s) 224, 267, 1400
BstH2I RGCGCY 1 cut(s) 1983
BstHHI GCGC 2 cut(s) 868, 1982
BstKTI GATC 6 cut(s) 205, 517, 685, 730, 1184, 1576
BstMAI GTCTC 3 cut(s) 194, 425, 858
BstMBI GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
BstMWI GCNNNNNNNGC 3 cut(s) 17, 23, 1832
BstNI CCWGG 1 cut(s) 870
BstNSI RCATGY 1 cut(s) 1656
BstSCI CCNGG 1 cut(s) 868
BstSFI CTRYAG 1 cut(s) 1923
BstSNI TACGTA 1 cut(s) 392
BstUI CGCG 3 cut(s) 224, 267, 1400
BstV1I GCAGC 2 cut(s) 4, 1763
BstV2I GAAGAC 2 cut(s) 216, 1950
BstX2I RGATCY 4 cut(s) 514, 727, 1181, 1573
BstYI RGATCY 4 cut(s) 514, 727, 1181, 1573
Bsu15I ATCGAT 1 cut(s) 1968
Bsu36I CCTNAGG 1 cut(s) 1034
BsuI GTATCC 1 cut(s) 704
BsuRI GGCC 6 cut(s) 426, 665, 873, 1032, 1394, 1849
BsuTUI ATCGAT 1 cut(s) 1968
BtsCI GGATG 2 cut(s) 1176, 1905
BtsIMutI CAGTG 1 cut(s) 1566
Cac8I GCNNGC 5 cut(s) 39, 226, 357, 1654, 1828
CfoI GCGC 2 cut(s) 868, 1982
Cfr13I GGNCC 2 cut(s) 1030, 1756
ClaI ATCGAT 1 cut(s) 1968
Csp6I GTAC 7 cut(s) 89, 441, 457, 1017, 1430, 1726, 1947
CviAII CATG 6 cut(s) 34, 536, 1306, 1434, 1526, 1653
CviQI GTAC 7 cut(s) 89, 441, 457, 1017, 1430, 1726, 1947
DdeI CTNAG 7 cut(s) 400, 624, 656, 686, 1034, 1223, 1321
DpnI GATC 6 cut(s) 204, 516, 684, 729, 1183, 1575
DpnII GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
DrdI GACNNNNNNGTC 1 cut(s) 784
DseDI GACNNNNNNGTC 1 cut(s) 784
Eam1104I CTCTTC 1 cut(s) 1680
EarI CTCTTC 1 cut(s) 1680
Eco105I TACGTA 1 cut(s) 392
Eco130I CCWWGG 2 cut(s) 581, 1176
Eco147I AGGCCT 2 cut(s) 873, 1849
Eco24I GRGCYC 2 cut(s) 357, 1677
Eco32I GATATC 1 cut(s) 1327
Eco47I GGWCC 1 cut(s) 1756
Eco57I CTGAAG 1 cut(s) 1117
Eco81I CCTNAGG 1 cut(s) 1034
EcoNI CCTNNNNNAGG 1 cut(s) 867
EcoO109I RGGNCCY 1 cut(s) 1030
EcoRII CCWGG 1 cut(s) 868
EcoRV GATATC 1 cut(s) 1327
EcoT14I CCWWGG 2 cut(s) 581, 1176
EcoT38I GRGCYC 2 cut(s) 357, 1677
ErhI CCWWGG 2 cut(s) 581, 1176
Esp3I CGTCTC 1 cut(s) 194
FaeI CATG 6 cut(s) 37, 539, 1309, 1437, 1529, 1656
FalI AAGNNNNNCTT 6 cut(s) 1304, 1336, 1479, 1511, 1942, 1974
FatI CATG 6 cut(s) 33, 535, 1305, 1433, 1525, 1652
FauI CCCGC 1 cut(s) 1649
FblI GTMKAC 1 cut(s) 546
Fnu4HI GCNGC 4 cut(s) 18, 405, 1752, 1898
FokI GGATG 2 cut(s) 1183, 1892
FriOI GRGCYC 2 cut(s) 357, 1677
Fsp4HI GCNGC 4 cut(s) 18, 405, 1752, 1898
FspBI CTAG 8 cut(s) 206, 287, 368, 725, 857, 914, 1458, 1571
GlaI GCGC 2 cut(s) 867, 1981
GluI GCNGC 4 cut(s) 18, 405, 1752, 1898
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 1 cut(s) 173
HaeII RGCGCY 1 cut(s) 1983
HaeIII GGCC 6 cut(s) 426, 665, 873, 1032, 1394, 1849
HapII CCGG 2 cut(s) 279, 746
HhaI GCGC 2 cut(s) 868, 1982
Hin1I GRCGYC 2 cut(s) 30, 549
Hin1II CATG 6 cut(s) 37, 539, 1309, 1437, 1529, 1656
Hin6I GCGC 2 cut(s) 866, 1980
HinP1I GCGC 2 cut(s) 866, 1980
HincII GTYRAC 4 cut(s) 136, 436, 547, 841
HindII GTYRAC 4 cut(s) 136, 436, 547, 841
HindIII AAGCTT 2 cut(s) 1094, 1318
HinfI GANTC 8 cut(s) 212, 1218, 1243, 1475, 1532, 1690, 1867, 1955
HpaII CCGG 2 cut(s) 279, 746
HphI GGTGA 6 cut(s) 43, 184, 565, 661, 1064, 1985
Hpy166II GTNNAC 9 cut(s) 136, 436, 547, 841, 1123, 1229, 1297, 1512, 1621
Hpy188III TCNNGA 5 cut(s) 152, 206, 490, 1222, 1385
Hpy8I GTNNAC 9 cut(s) 136, 436, 547, 841, 1123, 1229, 1297, 1512, 1621
Hpy99I CGWCG 4 cut(s) 176, 551, 781, 1274
HpyAV CCTTC 9 cut(s) 265, 370, 592, 596, 676, 1189, 1306, 1727, 1860
HpyCH4III ACNGT 6 cut(s) 61, 440, 533, 1162, 1561, 1625
HpyCH4IV ACGT 4 cut(s) 5, 30, 391, 549
HpyCH4V TGCA 4 cut(s) 41, 799, 990, 1525
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 23, 1832
HpyF3I CTNAG 7 cut(s) 400, 624, 656, 686, 1034, 1223, 1321
HpySE526I ACGT 4 cut(s) 5, 30, 391, 549
Hsp92I GRCGYC 2 cut(s) 30, 549
Hsp92II CATG 6 cut(s) 37, 539, 1309, 1437, 1529, 1656
HspAI GCGC 2 cut(s) 866, 1980
KpnI GGTACC 1 cut(s) 1433
Kzo9I GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
LmnI GCTCC 4 cut(s) 376, 1672, 1720, 1894
Lsp1109I GCAGC 2 cut(s) 4, 1763
LweI GCATC 3 cut(s) 151, 416, 1239
MaeI CTAG 8 cut(s) 206, 287, 368, 725, 857, 914, 1458, 1571
MaeII ACGT 4 cut(s) 5, 30, 391, 549
MaeIII GTNAC 2 cut(s) 392, 1156
MalI GATC 6 cut(s) 204, 516, 684, 729, 1183, 1575
MboI GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
MboII GAAGA 7 cut(s) 221, 355, 478, 816, 1541, 1697, 1950
MflI RGATCY 4 cut(s) 514, 727, 1181, 1573
MhlI GDGCHC 3 cut(s) 357, 1677, 1828
MluCI AATT 9 cut(s) 817, 1075, 1257, 1377, 1480, 1501, 1678, 1740, 1984
MlyI GAGTC 2 cut(s) 206, 1964
MmeI TCCRAC 5 cut(s) 61, 1452, 1477, 1534, 1986
MseI TTAA 2 cut(s) 1164, 1878
MslI CAYNNNNRTG 1 cut(s) 540
MspA1I CMGCKG 1 cut(s) 1754
MspI CCGG 2 cut(s) 279, 746
MspR9I CCNGG 1 cut(s) 870
MvaI CCWGG 1 cut(s) 870
MvnI CGCG 3 cut(s) 224, 267, 1400
MwoI GCNNNNNNNGC 3 cut(s) 17, 23, 1832
NdeII GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
NlaIII CATG 6 cut(s) 37, 539, 1309, 1437, 1529, 1656
NlaIV GGNNCC 4 cut(s) 382, 1431, 1674, 1758
NmeAIII GCCGAG 3 cut(s) 402, 749, 1108
NspI RCATGY 1 cut(s) 1656
NspV TTCGAA 1 cut(s) 1478
PaeI GCATGC 1 cut(s) 1656
PceI AGGCCT 2 cut(s) 873, 1849
PfeI GAWTC 6 cut(s) 1218, 1243, 1475, 1532, 1690, 1867
PflMI CCANNNNNTGG 1 cut(s) 582
PkrI GCNGC 4 cut(s) 19, 406, 1753, 1899
PleI GAGTC 2 cut(s) 206, 1963
PpsI GAGTC 2 cut(s) 206, 1963
Ppu21I YACGTR 1 cut(s) 392
Psp6I CCWGG 1 cut(s) 868
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 868
PspN4I GGNNCC 4 cut(s) 382, 1431, 1674, 1758
PspPI GGNCC 2 cut(s) 1030, 1756
PsrI GAACNNNNNNTAC 2 cut(s) 1422, 1454
PsuI RGATCY 4 cut(s) 514, 727, 1181, 1573
RsaI GTAC 7 cut(s) 90, 442, 458, 1018, 1431, 1727, 1948
RsaNI GTAC 7 cut(s) 89, 441, 457, 1017, 1430, 1726, 1947
RseI CAYNNNNRTG 1 cut(s) 540
SalI GTCGAC 1 cut(s) 545
SaqAI TTAA 2 cut(s) 1164, 1878
SatI GCNGC 4 cut(s) 18, 405, 1752, 1898
Sau3AI GATC 6 cut(s) 202, 514, 682, 727, 1181, 1573
Sau96I GGNCC 2 cut(s) 1030, 1756
ScaI AGTACT 1 cut(s) 1018
SchI GAGTC 2 cut(s) 206, 1964
ScrFI CCNGG 1 cut(s) 870
SduI GDGCHC 3 cut(s) 357, 1677, 1828
SfaNI GCATC 3 cut(s) 151, 416, 1239
SfcI CTRYAG 1 cut(s) 1923
SfuI TTCGAA 1 cut(s) 1478
SinI GGWCC 1 cut(s) 1756
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 2 cut(s) 1213, 1383
SmoI CTYRAG 2 cut(s) 1213, 1383
SnaBI TACGTA 1 cut(s) 392
SphI GCATGC 1 cut(s) 1656
Sse9I AATT 9 cut(s) 817, 1075, 1257, 1377, 1480, 1501, 1678, 1740, 1984
SseBI AGGCCT 2 cut(s) 873, 1849
SsiI CCGC 7 cut(s) 265, 405, 470, 1398, 1656, 1754, 1898
SspI AATATT 1 cut(s) 1421
SspMI CTAG 8 cut(s) 206, 287, 368, 725, 857, 914, 1458, 1571
StuI AGGCCT 2 cut(s) 873, 1849
StyD4I CCNGG 1 cut(s) 868
StyI CCWWGG 2 cut(s) 581, 1176
TaaI ACNGT 6 cut(s) 61, 440, 533, 1162, 1561, 1625
TaiI ACGT 4 cut(s) 8, 33, 394, 552
TaqI TCGA 7 cut(s) 97, 171, 235, 546, 776, 1478, 1968
TasI AATT 9 cut(s) 817, 1075, 1257, 1377, 1480, 1501, 1678, 1740, 1984
TatI WGTACW 4 cut(s) 88, 1016, 1725, 1946
TauI GCSGC 2 cut(s) 407, 1900
TfiI GAWTC 6 cut(s) 1218, 1243, 1475, 1532, 1690, 1867
Tru1I TTAA 2 cut(s) 1164, 1878
Tru9I TTAA 2 cut(s) 1164, 1878
TscAI CASTG 1 cut(s) 1566
TseI GCWGC 2 cut(s) 17, 1751
TspDTI ATGAA 4 cut(s) 611, 1294, 1430, 1542
TspGWI ACGGA 4 cut(s) 176, 360, 556, 1685
TspRI CASTG 1 cut(s) 1566
Van91I CCANNNNNTGG 1 cut(s) 582
VpaK11BI GGWCC 1 cut(s) 1756
XagI CCTNNNNNAGG 1 cut(s) 867
XapI RAATTY 4 cut(s) 817, 1075, 1480, 1501
XbaI TCTAGA 1 cut(s) 205
XceI RCATGY 1 cut(s) 1656
XmiI GTMKAC 1 cut(s) 546
XspI CTAG 8 cut(s) 206, 287, 368, 725, 857, 914, 1458, 1571
ZraI GACGTC 2 cut(s) 31, 550
ZrmI AGTACT 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.