Prupe.6G147100_v2.0.a1
ERF Family

Phosphatidylglycerol phosphatidylinositol transfer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0015418
Physical Location & Seq
Forward (+)
12206600 .. 12212132
5533 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G147100.1

Sequence Viewer

Length: 474 bp
ATGACCATGATTGTTCACTTGAAGCTCAACTTCATTGTGCTTTGCTTCTCCACCTTGTTCCTGCTTCTACCATTCACTCAGTCTACGGATGTCAAATATTGTAGTCAGACAGATGAATATGCTGTGAAGGTCCAGGGAGTCGAGATATTGCCTGACCCAGTGGTGAGAGGCAAGCCAGCTACCTTTAACATCTCGGCCTCAACAGGTCAAGCCATCTCCAGTGGGAAAGTGGTGATTGAGGTTTACTATTTTGGGGTGCGCGTACATACAGAAACTCATGATCTTTGTGAAAAGCTTTCCTGCCCGGTTTCAGCAGGAAACTTTGTGCTCTCTCACACCCAAACTTTACCTGGGATCACTCCCCCTGGCTCTTACAATCTCAAGATGACAATCAAGGATGATCACAACCAGAAGTTGTCTTGCATCAGTTTCAATTTTAAAATTGTCTTTGGATCTTTGGTCTCTGCTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
E1_DerP2_DerF2

Protein Analysis

158

Amino Acids

17.22

Weight (kDa)

7.66

Isoelectric Point (pI)

28.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015418)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44100
fragaria_vesca FvH4_3g26160
malus_domestica MD03G1159400.v1.1
prunus_persica Prupe.6G147100_v2.0.a1 Prupe.7G023800_v2.0.a1
pyrus_communis pycom03g11180
rosa_chinensis RchiOBHm_Chr5g0049041
rosa_laevigata RLG00000034586
rosa_roxburghii Rroxscaffold_1G00032830
rosa_rugosa Rorug05G0242500 Rorug05G0242600 Rorug05G0242700
rosa_samantha Rh5BG332700 Rh5CG357800 Rh5DG344300
rosa_wichuraiana Rw5G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 83
AccII CGCG 1 cut(s) 261
AclWI GGATC 2 cut(s) 362, 460
AfaI GTAC 1 cut(s) 264
AgsI TTSAA 2 cut(s) 22, 433
AjnI CCWGG 3 cut(s) 132, 349, 364
AluBI AGCT 3 cut(s) 25, 179, 295
AluI AGCT 3 cut(s) 25, 179, 295
Alw21I GWGCWC 1 cut(s) 330
Alw26I GTCTC 1 cut(s) 466
AlwI GGATC 2 cut(s) 362, 460
AoxI GGCC 1 cut(s) 195
AspLEI GCGC 1 cut(s) 261
AspS9I GGNCC 1 cut(s) 130
AsuC2I CCSGG 1 cut(s) 305
AsuHPI GGTGA 2 cut(s) 175, 244
AvaII GGWCC 1 cut(s) 130
Bbv12I GWGCWC 1 cut(s) 330
BccI CCATC 1 cut(s) 221
BciT130I CCWGG 3 cut(s) 134, 351, 366
BclI TGATCA 1 cut(s) 400
BcnI CCSGG 1 cut(s) 305
BcoDI GTCTC 1 cut(s) 466
BfaI CTAG 1 cut(s) 468
Bme1390I CCNGG 4 cut(s) 134, 305, 351, 366
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 130
BmrFI CCNGG 4 cut(s) 134, 305, 351, 366
BmrI ACTGGG 1 cut(s) 152
BmsI GCATC 1 cut(s) 432
BmuI ACTGGG 1 cut(s) 152
BpmI CTGGAG 1 cut(s) 202
BpuEI CTTGAG 1 cut(s) 365
BpuMI CCSGG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 389
BsaI GGTCTC 1 cut(s) 466
BsaJI CCNNGG 3 cut(s) 133, 350, 364
Bse1I ACTGG 2 cut(s) 158, 219
Bse8I GATNNNNATC 1 cut(s) 389
BseBI CCWGG 3 cut(s) 134, 351, 366
BseDI CCNNGG 3 cut(s) 133, 350, 364
BseGI GGATG 2 cut(s) 94, 403
BseJI GATNNNNATC 1 cut(s) 389
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 158, 219
Bsh1236I CGCG 1 cut(s) 261
BshFI GGCC 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 330
BsiSI CCGG 1 cut(s) 305
BsmAI GTCTC 1 cut(s) 466
BsnI GGCC 1 cut(s) 197
Bso31I GGTCTC 1 cut(s) 466
Bsp1286I GDGCHC 1 cut(s) 330
Bsp143I GATC 4 cut(s) 280, 354, 400, 452
BspANI GGCC 1 cut(s) 197
BspCNI CTCAG 1 cut(s) 91
BspFNI CGCG 1 cut(s) 261
BspHI TCATGA 1 cut(s) 277
BspPI GGATC 2 cut(s) 362, 460
BspTNI GGTCTC 1 cut(s) 466
BsrI ACTGG 2 cut(s) 158, 219
BssECI CCNNGG 3 cut(s) 133, 350, 364
BssMI GATC 4 cut(s) 280, 354, 400, 452
Bst2UI CCWGG 3 cut(s) 134, 351, 366
BstC8I GCNNGC 2 cut(s) 173, 177
BstDEI CTNAG 1 cut(s) 78
BstF5I GGATG 2 cut(s) 94, 403
BstFNI CGCG 1 cut(s) 261
BstHHI GCGC 1 cut(s) 261
BstKTI GATC 4 cut(s) 283, 357, 403, 455
BstMAI GTCTC 1 cut(s) 466
BstMBI GATC 4 cut(s) 280, 354, 400, 452
BstNI CCWGG 3 cut(s) 134, 351, 366
BstSCI CCNGG 4 cut(s) 132, 303, 349, 364
BstUI CGCG 1 cut(s) 261
BstX2I RGATCY 1 cut(s) 452
BstYI RGATCY 1 cut(s) 452
BsuRI GGCC 1 cut(s) 197
BtsCI GGATG 2 cut(s) 94, 403
BtsIMutI CAGTG 2 cut(s) 165, 226
Cac8I GCNNGC 2 cut(s) 173, 177
CciI TCATGA 1 cut(s) 277
CfoI GCGC 1 cut(s) 261
Cfr13I GGNCC 1 cut(s) 130
Csp6I GTAC 1 cut(s) 263
CviAII CATG 2 cut(s) 7, 278
CviJI RGCY 7 cut(s) 25, 175, 179, 197, 212, 295, 369
CviKI_1 RGCY 7 cut(s) 25, 175, 179, 197, 212, 295, 369
CviQI GTAC 1 cut(s) 263
DdeI CTNAG 1 cut(s) 78
DpnI GATC 4 cut(s) 282, 356, 402, 454
DpnII GATC 4 cut(s) 280, 354, 400, 452
DraI TTTAAA 1 cut(s) 439
Eco31I GGTCTC 1 cut(s) 466
Eco47I GGWCC 1 cut(s) 130
EcoRII CCWGG 3 cut(s) 132, 349, 364
FaeI CATG 2 cut(s) 10, 281
FaiI YATR 4 cut(s) 8, 120, 267, 279
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FatI CATG 2 cut(s) 6, 277
FbaI TGATCA 1 cut(s) 400
FblI GTMKAC 1 cut(s) 83
FokI GGATG 2 cut(s) 101, 410
FspBI CTAG 1 cut(s) 468
GlaI GCGC 1 cut(s) 260
GsuI CTGGAG 1 cut(s) 202
HaeIII GGCC 1 cut(s) 197
HapII CCGG 1 cut(s) 305
HhaI GCGC 1 cut(s) 261
Hin1II CATG 2 cut(s) 10, 281
Hin6I GCGC 1 cut(s) 259
HinP1I GCGC 1 cut(s) 259
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 1 cut(s) 138
HpaII CCGG 1 cut(s) 305
HphI GGTGA 2 cut(s) 175, 244
Hpy166II GTNNAC 3 cut(s) 16, 84, 244
Hpy188I TCNGA 1 cut(s) 108
Hpy188III TCNNGA 3 cut(s) 142, 278, 382
Hpy8I GTNNAC 3 cut(s) 16, 84, 244
HpyAV CCTTC 1 cut(s) 121
HpyCH4V TGCA 1 cut(s) 423
HpyF3I CTNAG 1 cut(s) 78
Hsp92II CATG 2 cut(s) 10, 281
HspAI GCGC 1 cut(s) 259
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 4 cut(s) 280, 354, 400, 452
LweI GCATC 1 cut(s) 432
MaeI CTAG 1 cut(s) 468
MalI GATC 4 cut(s) 282, 356, 402, 454
MboI GATC 4 cut(s) 280, 354, 400, 452
MflI RGATCY 1 cut(s) 452
MhlI GDGCHC 1 cut(s) 330
MluCI AATT 2 cut(s) 433, 441
MlyI GAGTC 1 cut(s) 147
MnlI CCTC 3 cut(s) 161, 208, 232
MseI TTAA 2 cut(s) 186, 438
MspI CCGG 1 cut(s) 305
MspR9I CCNGG 4 cut(s) 134, 305, 351, 366
MvaI CCWGG 3 cut(s) 134, 351, 366
MvnI CGCG 1 cut(s) 261
NciI CCSGG 1 cut(s) 305
NdeII GATC 4 cut(s) 280, 354, 400, 452
NlaIII CATG 2 cut(s) 10, 281
NmeAIII GCCGAG 1 cut(s) 173
PagI TCATGA 1 cut(s) 277
PleI GAGTC 1 cut(s) 146
PpsI GAGTC 1 cut(s) 146
Psp6I CCWGG 3 cut(s) 132, 349, 364
PspGI CCWGG 3 cut(s) 132, 349, 364
PspPI GGNCC 1 cut(s) 130
PsuI RGATCY 1 cut(s) 452
RsaI GTAC 1 cut(s) 264
RsaNI GTAC 1 cut(s) 263
SaqAI TTAA 2 cut(s) 186, 438
Sau3AI GATC 4 cut(s) 280, 354, 400, 452
Sau96I GGNCC 1 cut(s) 130
SchI GAGTC 1 cut(s) 147
ScrFI CCNGG 4 cut(s) 134, 305, 351, 366
SduI GDGCHC 1 cut(s) 330
SetI ASST 9 cut(s) 27, 56, 132, 181, 185, 208, 243, 297, 352
SfaNI GCATC 1 cut(s) 432
SinI GGWCC 1 cut(s) 130
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
Sse9I AATT 2 cut(s) 433, 441
SspI AATATT 1 cut(s) 98
SspMI CTAG 1 cut(s) 468
StyD4I CCNGG 4 cut(s) 132, 303, 349, 364
TaqI TCGA 1 cut(s) 141
TasI AATT 2 cut(s) 433, 441
Tru1I TTAA 2 cut(s) 186, 438
Tru9I TTAA 2 cut(s) 186, 438
TscAI CASTG 2 cut(s) 165, 226
TspDTI ATGAA 2 cut(s) 22, 129
TspGWI ACGGA 1 cut(s) 101
TspRI CASTG 2 cut(s) 165, 226
VpaK11BI GGWCC 1 cut(s) 130
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 347
XmiI GTMKAC 1 cut(s) 83
XspI CTAG 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.