DnaJ molecular chaperone homology domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18465 |
| fragaria_vesca | FvH4_1g23620 FvH4_1g23620 |
| malus_domestica | MD01G1016700.v1.1 |
| prunus_persica | Prupe.6G131200_v2.0.a1 Prupe.6G131200_v2.0.a1 Prupe.6G131200_v2.0.a1 Prupe.6G131200_v2.0.a1 Prupe.6G131200_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 Prupe.6G162400_v2.0.a1 |
| pyrus_communis | pycom01g02810 |
| rosa_chinensis | RchiOBHm_Chr2g0119201 |
| rosa_laevigata | RLG00000018451 |
| rosa_multiflora | Rmu_sc0000184.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00124450 |
| rosa_rugosa | Rorug02G0220900 |
| rosa_samantha | Rh2AG278800 Rh2BG289700 Rh2DG284800 Rh2DG303800 |
| rosa_wichuraiana | Rw2G022160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 625 |
| AciI | CCGC | 1 cut(s) | 73 |
| AclWI | GGATC | 1 cut(s) | 604 |
| AcsI | RAATTY | 3 cut(s) | 40, 253, 740 |
| AcuI | CTGAAG | 2 cut(s) | 408, 672 |
| AfaI | GTAC | 2 cut(s) | 446, 589 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 635, 721 |
| AflIII | ACRYGT | 1 cut(s) | 185 |
| AgsI | TTSAA | 3 cut(s) | 235, 370, 484 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 568 |
| AjiI | CACGTC | 2 cut(s) | 188, 565 |
| AjnI | CCWGG | 1 cut(s) | 449 |
| AluBI | AGCT | 4 cut(s) | 294, 525, 668, 683 |
| AluI | AGCT | 4 cut(s) | 294, 525, 668, 683 |
| AlwI | GGATC | 1 cut(s) | 604 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 497 |
| AoxI | GGCC | 1 cut(s) | 712 |
| ApeKI | GCWGC | 1 cut(s) | 731 |
| ApoI | RAATTY | 3 cut(s) | 40, 253, 740 |
| AspS9I | GGNCC | 4 cut(s) | 129, 243, 638, 713 |
| AvaII | GGWCC | 3 cut(s) | 129, 243, 638 |
| BauI | CACGAG | 1 cut(s) | 463 |
| BbsI | GAAGAC | 1 cut(s) | 396 |
| BbvI | GCAGC | 1 cut(s) | 718 |
| BccI | CCATC | 4 cut(s) | 9, 166, 435, 540 |
| BceAI | ACGGC | 1 cut(s) | 453 |
| BciT130I | CCWGG | 1 cut(s) | 451 |
| BfmI | CTRYAG | 3 cut(s) | 63, 591, 732 |
| BglII | AGATCT | 1 cut(s) | 317 |
| BisI | GCNGC | 1 cut(s) | 732 |
| BlsI | GCNGC | 1 cut(s) | 733 |
| Bme1390I | CCNGG | 1 cut(s) | 451 |
| Bme18I | GGWCC | 3 cut(s) | 129, 243, 638 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 568 |
| BmgBI | CACGTC | 2 cut(s) | 188, 565 |
| BmgT120I | GGNCC | 4 cut(s) | 129, 243, 638, 713 |
| BmiI | GGNNCC | 2 cut(s) | 86, 244 |
| BmrFI | CCNGG | 1 cut(s) | 451 |
| BmsI | GCATC | 1 cut(s) | 703 |
| BpiI | GAAGAC | 1 cut(s) | 396 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 307, 339, 368, 400 |
| BpuEI | CTTGAG | 1 cut(s) | 20 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 635, 721 |
| Bse3DI | GCAATG | 1 cut(s) | 784 |
| BseBI | CCWGG | 1 cut(s) | 451 |
| BseGI | GGATG | 1 cut(s) | 694 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 635, 721 |
| BseMI | GCAATG | 1 cut(s) | 784 |
| BseMII | CTCAG | 3 cut(s) | 314, 324, 399 |
| BseRI | GAGGAG | 3 cut(s) | 218, 288, 466 |
| BseXI | GCAGC | 1 cut(s) | 718 |
| BseYI | CCCAGC | 1 cut(s) | 790 |
| BshFI | GGCC | 1 cut(s) | 714 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 635, 721 |
| BsnI | GGCC | 1 cut(s) | 714 |
| Bsp143I | GATC | 2 cut(s) | 317, 596 |
| BspACI | CCGC | 1 cut(s) | 73 |
| BspANI | GGCC | 1 cut(s) | 714 |
| BspCNI | CTCAG | 3 cut(s) | 313, 325, 400 |
| BspLI | GGNNCC | 2 cut(s) | 86, 244 |
| BspMAI | CTGCAG | 1 cut(s) | 736 |
| BspPI | GGATC | 1 cut(s) | 604 |
| BsrDI | GCAATG | 1 cut(s) | 784 |
| BssMI | GATC | 2 cut(s) | 317, 596 |
| BssSI | CACGAG | 1 cut(s) | 463 |
| Bst2BI | CACGAG | 1 cut(s) | 463 |
| Bst2UI | CCWGG | 1 cut(s) | 451 |
| Bst4CI | ACNGT | 1 cut(s) | 239 |
| Bst6I | CTCTTC | 1 cut(s) | 236 |
| BstDEI | CTNAG | 3 cut(s) | 300, 333, 408 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 633 |
| BstF5I | GGATG | 1 cut(s) | 694 |
| BstKTI | GATC | 2 cut(s) | 320, 599 |
| BstMBI | GATC | 2 cut(s) | 317, 596 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 731 |
| BstNI | CCWGG | 1 cut(s) | 451 |
| BstNSI | RCATGY | 1 cut(s) | 332 |
| BstSCI | CCNGG | 1 cut(s) | 449 |
| BstSFI | CTRYAG | 3 cut(s) | 63, 591, 732 |
| BstV1I | GCAGC | 1 cut(s) | 718 |
| BstV2I | GAAGAC | 1 cut(s) | 396 |
| BstX2I | RGATCY | 2 cut(s) | 317, 596 |
| BstYI | RGATCY | 2 cut(s) | 317, 596 |
| BsuRI | GGCC | 1 cut(s) | 714 |
| BtrI | CACGTC | 2 cut(s) | 188, 565 |
| BtsCI | GGATG | 1 cut(s) | 694 |
| BtsIMutI | CAGTG | 1 cut(s) | 244 |
| CaiI | CAGNNNCTG | 1 cut(s) | 497 |
| Cfr13I | GGNCC | 4 cut(s) | 129, 243, 638, 713 |
| CsiI | ACCWGGT | 1 cut(s) | 449 |
| Csp6I | GTAC | 2 cut(s) | 445, 588 |
| CviAII | CATG | 4 cut(s) | 105, 329, 585, 707 |
| CviJI | RGCY | 8 cut(s) | 215, 294, 525, 668, 683, 714, 725, 731 |
| CviKI_1 | RGCY | 8 cut(s) | 215, 294, 525, 668, 683, 714, 725, 731 |
| CviQI | GTAC | 2 cut(s) | 445, 588 |
| DdeI | CTNAG | 3 cut(s) | 300, 333, 408 |
| DpnI | GATC | 2 cut(s) | 319, 598 |
| DpnII | GATC | 2 cut(s) | 317, 596 |
| DraI | TTTAAA | 3 cut(s) | 645, 687, 745 |
| DriI | GACNNNNNGTC | 1 cut(s) | 568 |
| Eam1104I | CTCTTC | 1 cut(s) | 236 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 568 |
| EarI | CTCTTC | 1 cut(s) | 236 |
| Eco47I | GGWCC | 3 cut(s) | 129, 243, 638 |
| Eco57I | CTGAAG | 2 cut(s) | 408, 672 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 633 |
| EcoO109I | RGGNCCY | 3 cut(s) | 243, 638, 713 |
| EcoRI | GAATTC | 1 cut(s) | 40 |
| EcoRII | CCWGG | 1 cut(s) | 449 |
| FaeI | CATG | 4 cut(s) | 108, 332, 588, 710 |
| FaiI | YATR | 8 cut(s) | 106, 180, 309, 330, 586, 593, 708, 728 |
| FatI | CATG | 4 cut(s) | 104, 328, 584, 706 |
| FauI | CCCGC | 1 cut(s) | 80 |
| FblI | GTMKAC | 1 cut(s) | 625 |
| Fnu4HI | GCNGC | 1 cut(s) | 732 |
| FokI | GGATG | 1 cut(s) | 681 |
| Fsp4HI | GCNGC | 1 cut(s) | 732 |
| GluI | GCNGC | 1 cut(s) | 732 |
| GsaI | CCCAGC | 1 cut(s) | 794 |
| HaeIII | GGCC | 1 cut(s) | 714 |
| Hin1II | CATG | 4 cut(s) | 108, 332, 588, 710 |
| HincII | GTYRAC | 1 cut(s) | 152 |
| HindII | GTYRAC | 1 cut(s) | 152 |
| HindIII | AAGCTT | 1 cut(s) | 666 |
| HinfI | GANTC | 8 cut(s) | 284, 410, 461, 473, 488, 494, 569, 581 |
| Hpy166II | GTNNAC | 4 cut(s) | 152, 447, 510, 626 |
| Hpy188I | TCNGA | 9 cut(s) | 176, 192, 264, 273, 303, 388, 493, 574, 607 |
| Hpy188III | TCNNGA | 7 cut(s) | 37, 288, 315, 324, 407, 498, 698 |
| Hpy8I | GTNNAC | 4 cut(s) | 152, 447, 510, 626 |
| HpyAV | CCTTC | 2 cut(s) | 704, 726 |
| HpyCH4III | ACNGT | 1 cut(s) | 239 |
| HpyCH4IV | ACGT | 3 cut(s) | 187, 196, 564 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 182, 734, 777, 782 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 731 |
| HpyF3I | CTNAG | 3 cut(s) | 300, 333, 408 |
| HpySE526I | ACGT | 3 cut(s) | 187, 196, 564 |
| Hsp92II | CATG | 4 cut(s) | 108, 332, 588, 710 |
| Kzo9I | GATC | 2 cut(s) | 317, 596 |
| Lsp1109I | GCAGC | 1 cut(s) | 718 |
| LweI | GCATC | 1 cut(s) | 703 |
| MabI | ACCWGGT | 1 cut(s) | 449 |
| MaeII | ACGT | 3 cut(s) | 187, 196, 564 |
| MaeIII | GTNAC | 2 cut(s) | 470, 560 |
| MalI | GATC | 2 cut(s) | 319, 598 |
| MboI | GATC | 2 cut(s) | 317, 596 |
| MboII | GAAGA | 5 cut(s) | 130, 223, 312, 401, 665 |
| MflI | RGATCY | 2 cut(s) | 317, 596 |
| MluCI | AATT | 5 cut(s) | 40, 166, 253, 615, 740 |
| MlyI | GAGTC | 5 cut(s) | 419, 455, 467, 578, 590 |
| MmeI | TCCRAC | 2 cut(s) | 122, 656 |
| MnlI | CCTC | 6 cut(s) | 236, 239, 256, 309, 487, 639 |
| MseI | TTAA | 5 cut(s) | 644, 660, 686, 744, 756 |
| MspR9I | CCNGG | 1 cut(s) | 451 |
| MvaI | CCWGG | 1 cut(s) | 451 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 731 |
| NdeII | GATC | 2 cut(s) | 317, 596 |
| NlaIII | CATG | 4 cut(s) | 108, 332, 588, 710 |
| NlaIV | GGNNCC | 2 cut(s) | 86, 244 |
| NmuCI | GTSAC | 2 cut(s) | 470, 560 |
| NspI | RCATGY | 1 cut(s) | 332 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 193 |
| PfeI | GAWTC | 3 cut(s) | 284, 488, 494 |
| PkrI | GCNGC | 1 cut(s) | 733 |
| PleI | GAGTC | 5 cut(s) | 418, 455, 467, 577, 589 |
| PpsI | GAGTC | 5 cut(s) | 418, 455, 467, 577, 589 |
| PpuMI | RGGWCCY | 2 cut(s) | 243, 638 |
| Psp5II | RGGWCCY | 2 cut(s) | 243, 638 |
| Psp6I | CCWGG | 1 cut(s) | 449 |
| PspFI | CCCAGC | 1 cut(s) | 790 |
| PspGI | CCWGG | 1 cut(s) | 449 |
| PspN4I | GGNNCC | 2 cut(s) | 86, 244 |
| PspPI | GGNCC | 4 cut(s) | 129, 243, 638, 713 |
| PspPPI | RGGWCCY | 2 cut(s) | 243, 638 |
| PstI | CTGCAG | 1 cut(s) | 736 |
| PstNI | CAGNNNCTG | 1 cut(s) | 497 |
| PsuI | RGATCY | 2 cut(s) | 317, 596 |
| RsaI | GTAC | 2 cut(s) | 446, 589 |
| RsaNI | GTAC | 2 cut(s) | 445, 588 |
| SaqAI | TTAA | 5 cut(s) | 644, 660, 686, 744, 756 |
| SatI | GCNGC | 1 cut(s) | 732 |
| Sau3AI | GATC | 2 cut(s) | 317, 596 |
| Sau96I | GGNCC | 4 cut(s) | 129, 243, 638, 713 |
| SchI | GAGTC | 5 cut(s) | 419, 455, 467, 578, 590 |
| ScrFI | CCNGG | 1 cut(s) | 451 |
| SexAI | ACCWGGT | 1 cut(s) | 449 |
| SfaNI | GCATC | 1 cut(s) | 703 |
| SfcI | CTRYAG | 3 cut(s) | 63, 591, 732 |
| SinI | GGWCC | 3 cut(s) | 129, 243, 638 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| Sse9I | AATT | 5 cut(s) | 40, 166, 253, 615, 740 |
| SsiI | CCGC | 1 cut(s) | 73 |
| StyD4I | CCNGG | 1 cut(s) | 449 |
| TaaI | ACNGT | 1 cut(s) | 239 |
| TaiI | ACGT | 3 cut(s) | 190, 199, 567 |
| TaqI | TCGA | 2 cut(s) | 314, 325 |
| TasI | AATT | 5 cut(s) | 40, 166, 253, 615, 740 |
| TatI | WGTACW | 1 cut(s) | 587 |
| TfiI | GAWTC | 3 cut(s) | 284, 488, 494 |
| Tru1I | TTAA | 5 cut(s) | 644, 660, 686, 744, 756 |
| Tru9I | TTAA | 5 cut(s) | 644, 660, 686, 744, 756 |
| TscAI | CASTG | 1 cut(s) | 244 |
| TseFI | GTSAC | 2 cut(s) | 470, 560 |
| TseI | GCWGC | 1 cut(s) | 731 |
| Tsp45I | GTSAC | 2 cut(s) | 470, 560 |
| TspDTI | ATGAA | 5 cut(s) | 33, 42, 93, 291, 723 |
| TspRI | CASTG | 1 cut(s) | 244 |
| VpaK11BI | GGWCC | 3 cut(s) | 129, 243, 638 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 633 |
| XapI | RAATTY | 3 cut(s) | 40, 253, 740 |
| XceI | RCATGY | 1 cut(s) | 332 |
| XmiI | GTMKAC | 1 cut(s) | 625 |