Pentatricopeptide repeat-containing protein At3g18110
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18110 |
| fragaria_vesca | FvH4_4g17300 FvH4_4g17300 |
| malus_domestica | MD07G1304500.v1.1 |
| prunus_persica | Prupe.6G174500_v2.0.a1 |
| pyrus_communis | pycom07g27730 |
| rosa_chinensis | RchiOBHm_Chr4g0421271 |
| rosa_laevigata | RLG00000007705 |
| rosa_multiflora | Rmu_sc0009290.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00363500 |
| rosa_rugosa | Rorug04G0169600 |
| rosa_samantha | Rh4AG230100 Rh4BG232900 Rh4CG244500 Rh4DG228700 |
| rosa_wichuraiana | Rw4G020360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 1044, 1055, 2078, 3047, 3492 |
| Acc36I | ACCTGC | 1 cut(s) | 2786 |
| Acc65I | GGTACC | 1 cut(s) | 973 |
| AccB1I | GGYRCC | 1 cut(s) | 973 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 510, 2302 |
| AccBSI | CCGCTC | 1 cut(s) | 1201 |
| AccI | GTMKAC | 4 cut(s) | 675, 2421, 2985, 3067 |
| AccII | CGCG | 3 cut(s) | 44, 1069, 4239 |
| AciI | CCGC | 6 cut(s) | 5, 42, 120, 1201, 1792, 4239 |
| AclWI | GGATC | 4 cut(s) | 1773, 3186, 3237, 3945 |
| AcoI | YGGCCR | 2 cut(s) | 643, 859 |
| AcsI | RAATTY | 7 cut(s) | 394, 688, 2039, 2929, 3268, 3501, 4298 |
| AcuI | CTGAAG | 4 cut(s) | 1718, 2103, 3207, 3497 |
| AcyI | GRCGYC | 1 cut(s) | 843 |
| AdeI | CACNNNGTG | 2 cut(s) | 3629, 4097 |
| AfaI | GTAC | 8 cut(s) | 154, 704, 827, 975, 3009, 3053, 4016, 4039 |
| AflII | CTTAAG | 1 cut(s) | 2939 |
| AflIII | ACRYGT | 1 cut(s) | 1374 |
| AjnI | CCWGG | 3 cut(s) | 759, 2673, 3534 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 789, 821, 2590, 2622 |
| AleI | CACNNNNGTG | 1 cut(s) | 3597 |
| Alw21I | GWGCWC | 3 cut(s) | 22, 2310, 2661 |
| Alw26I | GTCTC | 4 cut(s) | 935, 1616, 1703, 2330 |
| AlwI | GGATC | 4 cut(s) | 1773, 3186, 3237, 3945 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3172 |
| Ama87I | CYCGRG | 1 cut(s) | 2742 |
| ApoI | RAATTY | 7 cut(s) | 394, 688, 2039, 2929, 3268, 3501, 4298 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 121 |
| Asp718I | GGTACC | 1 cut(s) | 973 |
| AspLEI | GCGC | 2 cut(s) | 46, 4239 |
| AsuC2I | CCSGG | 2 cut(s) | 801, 2061 |
| AsuNHI | GCTAGC | 1 cut(s) | 755 |
| AvaI | CYCGRG | 1 cut(s) | 2742 |
| AvaII | GGWCC | 6 cut(s) | 874, 919, 2588, 3234, 3766, 4162 |
| AxyI | CCTNAGG | 3 cut(s) | 956, 3387, 4127 |
| BalI | TGGCCA | 1 cut(s) | 645 |
| BanI | GGYRCC | 1 cut(s) | 973 |
| BanII | GRGCYC | 1 cut(s) | 2661 |
| BauI | CACGAG | 2 cut(s) | 787, 923 |
| BbsI | GAAGAC | 2 cut(s) | 393, 3735 |
| Bbv12I | GWGCWC | 3 cut(s) | 22, 2310, 2661 |
| BceAI | ACGGC | 1 cut(s) | 4250 |
| BciT130I | CCWGG | 3 cut(s) | 761, 2675, 3536 |
| BciVI | GTATCC | 1 cut(s) | 412 |
| BclI | TGATCA | 3 cut(s) | 1836, 2356, 2832 |
| BcnI | CCSGG | 2 cut(s) | 801, 2061 |
| BcoDI | GTCTC | 4 cut(s) | 935, 1616, 1703, 2330 |
| BfmI | CTRYAG | 3 cut(s) | 241, 2793, 3055 |
| BfrI | CTTAAG | 1 cut(s) | 2939 |
| BfuAI | ACCTGC | 1 cut(s) | 2786 |
| BfuI | GTATCC | 1 cut(s) | 412 |
| BglII | AGATCT | 1 cut(s) | 3433 |
| BlpI | GCTNAGC | 1 cut(s) | 1197 |
| BmcAI | AGTACT | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 5 cut(s) | 761, 801, 2061, 2675, 3536 |
| Bme18I | GGWCC | 6 cut(s) | 874, 919, 2588, 3234, 3766, 4162 |
| BmeT110I | CYCGRG | 1 cut(s) | 2742 |
| BmiI | GGNNCC | 6 cut(s) | 272, 967, 975, 2065, 2159, 3540 |
| BmrFI | CCNGG | 5 cut(s) | 761, 801, 2061, 2675, 3536 |
| BmrI | ACTGGG | 2 cut(s) | 189, 3883 |
| BmtI | GCTAGC | 1 cut(s) | 759 |
| BmuI | ACTGGG | 2 cut(s) | 189, 3883 |
| BpiI | GAAGAC | 2 cut(s) | 393, 3735 |
| BpmI | CTGGAG | 1 cut(s) | 3557 |
| Bpu10I | CCTNAGC | 2 cut(s) | 769, 4433 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1197 |
| BpuEI | CTTGAG | 2 cut(s) | 1602, 4187 |
| BpuMI | CCSGG | 2 cut(s) | 801, 2061 |
| Bsa29I | ATCGAT | 1 cut(s) | 1476 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2831 |
| BsaHI | GRCGYC | 1 cut(s) | 843 |
| BsaJI | CCNNGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| BsaWI | WCCGGW | 1 cut(s) | 916 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 689, 719, 957, 987 |
| Bse118I | RCCGGY | 1 cut(s) | 861 |
| Bse1I | ACTGG | 8 cut(s) | 184, 492, 646, 704, 1947, 3231, 3430, 3878 |
| Bse21I | CCTNAGG | 3 cut(s) | 956, 3387, 4127 |
| Bse3DI | GCAATG | 2 cut(s) | 2883, 3700 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2831 |
| BseBI | CCWGG | 3 cut(s) | 761, 2675, 3536 |
| BseCI | ATCGAT | 1 cut(s) | 1476 |
| BseDI | CCNNGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| BseGI | GGATG | 9 cut(s) | 592, 726, 2659, 2872, 3224, 3955, 4007, 4137, 4229 |
| BseJI | GATNNNNATC | 1 cut(s) | 2831 |
| BseMI | GCAATG | 2 cut(s) | 2883, 3700 |
| BseNI | ACTGG | 8 cut(s) | 184, 492, 646, 704, 1947, 3231, 3430, 3878 |
| BseRI | GAGGAG | 2 cut(s) | 312, 1100 |
| BseYI | CCCAGC | 3 cut(s) | 1598, 3588, 4183 |
| BsgI | GTGCAG | 1 cut(s) | 2866 |
| Bsh1236I | CGCG | 3 cut(s) | 44, 1069, 4239 |
| BshNI | GGYRCC | 1 cut(s) | 973 |
| BshVI | ATCGAT | 1 cut(s) | 1476 |
| BsiHKAI | GWGCWC | 3 cut(s) | 22, 2310, 2661 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2742 |
| BsiSI | CCGG | 7 cut(s) | 801, 862, 917, 1441, 2061, 3321, 3636 |
| BslFI | GGGAC | 3 cut(s) | 564, 1436, 4018 |
| BsmAI | GTCTC | 4 cut(s) | 935, 1616, 1703, 2330 |
| BsmFI | GGGAC | 3 cut(s) | 564, 1436, 4018 |
| BsmI | GAATGC | 4 cut(s) | 8, 55, 718, 2515 |
| BsoBI | CYCGRG | 1 cut(s) | 2742 |
| Bsp1286I | GDGCHC | 3 cut(s) | 22, 2310, 2661 |
| Bsp1407I | TGTACA | 1 cut(s) | 825 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1197 |
| Bsp19I | CCATGG | 2 cut(s) | 969, 2779 |
| BspACI | CCGC | 6 cut(s) | 5, 42, 120, 1201, 1792, 4239 |
| BspDI | ATCGAT | 1 cut(s) | 1476 |
| BspFNI | CGCG | 3 cut(s) | 44, 1069, 4239 |
| BspLI | GGNNCC | 6 cut(s) | 272, 967, 975, 2065, 2159, 3540 |
| BspMAI | CTGCAG | 2 cut(s) | 2797, 3059 |
| BspMI | ACCTGC | 1 cut(s) | 2786 |
| BspOI | GCTAGC | 1 cut(s) | 759 |
| BspPI | GGATC | 4 cut(s) | 1773, 3186, 3237, 3945 |
| BspQI | GCTCTTC | 1 cut(s) | 142 |
| BspT107I | GGYRCC | 1 cut(s) | 973 |
| BspTI | CTTAAG | 1 cut(s) | 2939 |
| BsrBI | CCGCTC | 1 cut(s) | 1201 |
| BsrDI | GCAATG | 2 cut(s) | 2883, 3700 |
| BsrFI | RCCGGY | 1 cut(s) | 861 |
| BsrGI | TGTACA | 1 cut(s) | 825 |
| BsrI | ACTGG | 8 cut(s) | 184, 492, 646, 704, 1947, 3231, 3430, 3878 |
| BssAI | RCCGGY | 1 cut(s) | 861 |
| BssECI | CCNNGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| BssNAI | GTATAC | 1 cut(s) | 2986 |
| BssNI | GRCGYC | 1 cut(s) | 843 |
| BssSI | CACGAG | 2 cut(s) | 787, 923 |
| BssT1I | CCWWGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| Bst1107I | GTATAC | 1 cut(s) | 2986 |
| Bst2BI | CACGAG | 2 cut(s) | 787, 923 |
| Bst2UI | CCWGG | 3 cut(s) | 761, 2675, 3536 |
| Bst4CI | ACNGT | 7 cut(s) | 817, 1468, 1541, 1754, 2977, 4037, 4458 |
| Bst6I | CTCTTC | 8 cut(s) | 142, 1563, 1798, 1888, 2208, 2889, 3195, 4433 |
| BstACI | GRCGYC | 1 cut(s) | 843 |
| BstAFI | CTTAAG | 1 cut(s) | 2939 |
| BstAUI | TGTACA | 1 cut(s) | 825 |
| BstDSI | CCRYGG | 2 cut(s) | 969, 2779 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 749 |
| BstF5I | GGATG | 9 cut(s) | 592, 726, 2659, 2872, 3224, 3955, 4007, 4137, 4229 |
| BstFNI | CGCG | 3 cut(s) | 44, 1069, 4239 |
| BstHHI | GCGC | 2 cut(s) | 46, 4239 |
| BstMAI | GTCTC | 4 cut(s) | 935, 1616, 1703, 2330 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 52, 204, 651, 1389, 1393, 2531, 2636, 3908, 4310 |
| BstNI | CCWGG | 3 cut(s) | 761, 2675, 3536 |
| BstNSI | RCATGY | 4 cut(s) | 1378, 2028, 2057, 4053 |
| BstSCI | CCNGG | 5 cut(s) | 759, 799, 2059, 2673, 3534 |
| BstSFI | CTRYAG | 3 cut(s) | 241, 2793, 3055 |
| BstUI | CGCG | 3 cut(s) | 44, 1069, 4239 |
| BstV2I | GAAGAC | 2 cut(s) | 393, 3735 |
| BstX2I | RGATCY | 1 cut(s) | 3433 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1379 |
| BstYI | RGATCY | 1 cut(s) | 3433 |
| BstZ17I | GTATAC | 1 cut(s) | 2986 |
| Bsu15I | ATCGAT | 1 cut(s) | 1476 |
| Bsu36I | CCTNAGG | 3 cut(s) | 956, 3387, 4127 |
| BsuI | GTATCC | 1 cut(s) | 412 |
| BsuTUI | ATCGAT | 1 cut(s) | 1476 |
| BtgI | CCRYGG | 2 cut(s) | 969, 2779 |
| BtgZI | GCGATG | 2 cut(s) | 66, 213 |
| BtsCI | GGATG | 9 cut(s) | 592, 726, 2659, 2872, 3224, 3955, 4007, 4137, 4229 |
| BtsI | GCAGTG | 5 cut(s) | 1098, 1251, 2496, 3623, 3795 |
| BveI | ACCTGC | 1 cut(s) | 2786 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3172 |
| CfoI | GCGC | 2 cut(s) | 46, 4239 |
| Cfr10I | RCCGGY | 1 cut(s) | 861 |
| ClaI | ATCGAT | 1 cut(s) | 1476 |
| CseI | GACGC | 1 cut(s) | 832 |
| Csp6I | GTAC | 8 cut(s) | 153, 703, 826, 974, 3008, 3052, 4015, 4038 |
| CviQI | GTAC | 8 cut(s) | 153, 703, 826, 974, 3008, 3052, 4015, 4038 |
| DraI | TTTAAA | 3 cut(s) | 999, 2697, 4506 |
| DraIII | CACNNNGTG | 2 cut(s) | 3629, 4097 |
| EaeI | YGGCCR | 2 cut(s) | 643, 859 |
| Eam1104I | CTCTTC | 8 cut(s) | 142, 1563, 1798, 1888, 2208, 2889, 3195, 4433 |
| EarI | CTCTTC | 8 cut(s) | 142, 1563, 1798, 1888, 2208, 2889, 3195, 4433 |
| Ecl136II | GAGCTC | 1 cut(s) | 2659 |
| Eco130I | CCWWGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| Eco147I | AGGCCT | 1 cut(s) | 3534 |
| Eco24I | GRGCYC | 1 cut(s) | 2661 |
| Eco32I | GATATC | 1 cut(s) | 1690 |
| Eco47I | GGWCC | 6 cut(s) | 874, 919, 2588, 3234, 3766, 4162 |
| Eco53kI | GAGCTC | 1 cut(s) | 2659 |
| Eco57I | CTGAAG | 4 cut(s) | 1718, 2103, 3207, 3497 |
| Eco81I | CCTNAGG | 3 cut(s) | 956, 3387, 4127 |
| Eco88I | CYCGRG | 1 cut(s) | 2742 |
| EcoICRI | GAGCTC | 1 cut(s) | 2659 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 749 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3112, 3766 |
| EcoRI | GAATTC | 2 cut(s) | 2929, 3501 |
| EcoRII | CCWGG | 3 cut(s) | 759, 2673, 3534 |
| EcoRV | GATATC | 1 cut(s) | 1690 |
| EcoT14I | CCWWGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| EcoT22I | ATGCAT | 1 cut(s) | 3955 |
| EcoT38I | GRGCYC | 1 cut(s) | 2661 |
| ErhI | CCWWGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 106, 138, 2994, 3026 |
| FaqI | GGGAC | 3 cut(s) | 564, 1436, 4018 |
| FauI | CCCGC | 1 cut(s) | 1785 |
| FauNDI | CATATG | 2 cut(s) | 1588, 3781 |
| FbaI | TGATCA | 3 cut(s) | 1836, 2356, 2832 |
| FblI | GTMKAC | 4 cut(s) | 675, 2421, 2985, 3067 |
| FokI | GGATG | 9 cut(s) | 599, 733, 2666, 2879, 3231, 3962, 3994, 4144, 4236 |
| FriOI | GRGCYC | 1 cut(s) | 2661 |
| GlaI | GCGC | 2 cut(s) | 45, 4238 |
| GsaI | CCCAGC | 3 cut(s) | 1602, 3592, 4187 |
| GsuI | CTGGAG | 1 cut(s) | 3557 |
| HapII | CCGG | 7 cut(s) | 801, 862, 917, 1441, 2061, 3321, 3636 |
| HgaI | GACGC | 1 cut(s) | 832 |
| HhaI | GCGC | 2 cut(s) | 46, 4239 |
| Hin1I | GRCGYC | 1 cut(s) | 843 |
| Hin6I | GCGC | 2 cut(s) | 44, 4237 |
| HinP1I | GCGC | 2 cut(s) | 44, 4237 |
| HincII | GTYRAC | 2 cut(s) | 2395, 3068 |
| HindII | GTYRAC | 2 cut(s) | 2395, 3068 |
| HindIII | AAGCTT | 5 cut(s) | 2235, 2523, 3142, 4430, 4500 |
| HpaII | CCGG | 7 cut(s) | 801, 862, 917, 1441, 2061, 3321, 3636 |
| Hpy99I | CGWCG | 2 cut(s) | 31, 566 |
| HpyCH4III | ACNGT | 7 cut(s) | 817, 1468, 1541, 1754, 2977, 4037, 4458 |
| HpyCH4IV | ACGT | 3 cut(s) | 1250, 1727, 3443 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 52, 204, 651, 1389, 1393, 2531, 2636, 3908, 4310 |
| HpySE526I | ACGT | 3 cut(s) | 1250, 1727, 3443 |
| Hsp92I | GRCGYC | 1 cut(s) | 843 |
| HspAI | GCGC | 2 cut(s) | 44, 4237 |
| KpnI | GGTACC | 1 cut(s) | 977 |
| Ksp22I | TGATCA | 3 cut(s) | 1836, 2356, 2832 |
| LguI | GCTCTTC | 1 cut(s) | 142 |
| LmnI | GCTCC | 4 cut(s) | 17, 965, 2062, 3538 |
| MaeII | ACGT | 3 cut(s) | 1250, 1727, 3443 |
| MaeIII | GTNAC | 7 cut(s) | 1246, 1456, 2750, 3421, 3444, 3661, 3678 |
| MbiI | CCGCTC | 1 cut(s) | 1201 |
| MfeI | CAATTG | 1 cut(s) | 2601 |
| MflI | RGATCY | 1 cut(s) | 3433 |
| MhlI | GDGCHC | 3 cut(s) | 22, 2310, 2661 |
| MlsI | TGGCCA | 1 cut(s) | 645 |
| MluNI | TGGCCA | 1 cut(s) | 645 |
| MlyI | GAGTC | 7 cut(s) | 284, 359, 937, 1229, 1438, 3686, 4139 |
| MmeI | TCCRAC | 6 cut(s) | 387, 564, 1515, 1941, 3108, 3156 |
| Mox20I | TGGCCA | 1 cut(s) | 645 |
| Mph1103I | ATGCAT | 1 cut(s) | 3955 |
| MroXI | GAANNNNTTC | 1 cut(s) | 121 |
| MscI | TGGCCA | 1 cut(s) | 645 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1377, 1430, 2576, 3308, 3597 |
| Msp20I | TGGCCA | 1 cut(s) | 645 |
| MspA1I | CMGCKG | 2 cut(s) | 3902, 4213 |
| MspCI | CTTAAG | 1 cut(s) | 2939 |
| MspI | CCGG | 7 cut(s) | 801, 862, 917, 1441, 2061, 3321, 3636 |
| MspR9I | CCNGG | 5 cut(s) | 761, 801, 2061, 2675, 3536 |
| MunI | CAATTG | 1 cut(s) | 2601 |
| Mva1269I | GAATGC | 4 cut(s) | 8, 55, 718, 2515 |
| MvaI | CCWGG | 3 cut(s) | 761, 2675, 3536 |
| MvnI | CGCG | 3 cut(s) | 44, 1069, 4239 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 52, 204, 651, 1389, 1393, 2531, 2636, 3908, 4310 |
| NciI | CCSGG | 2 cut(s) | 801, 2061 |
| NcoI | CCATGG | 2 cut(s) | 969, 2779 |
| NdeI | CATATG | 2 cut(s) | 1588, 3781 |
| NheI | GCTAGC | 1 cut(s) | 755 |
| NlaIV | GGNNCC | 6 cut(s) | 272, 967, 975, 2065, 2159, 3540 |
| NmuCI | GTSAC | 3 cut(s) | 1246, 3661, 3678 |
| NsiI | ATGCAT | 1 cut(s) | 3955 |
| NspI | RCATGY | 4 cut(s) | 1378, 2028, 2057, 4053 |
| OliI | CACNNNNGTG | 1 cut(s) | 3597 |
| PaeI | GCATGC | 1 cut(s) | 4053 |
| PaeR7I | CTCGAG | 1 cut(s) | 2742 |
| PceI | AGGCCT | 1 cut(s) | 3534 |
| PciI | ACATGT | 1 cut(s) | 1374 |
| PciSI | GCTCTTC | 1 cut(s) | 142 |
| PctI | GAATGC | 4 cut(s) | 8, 55, 718, 2515 |
| PdmI | GAANNNNTTC | 1 cut(s) | 121 |
| PflFI | GACNNNGTC | 1 cut(s) | 2390 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 510, 2302 |
| PfoI | TCCNGGA | 1 cut(s) | 2673 |
| PleI | GAGTC | 7 cut(s) | 284, 359, 936, 1228, 1438, 3685, 4139 |
| PpsI | GAGTC | 7 cut(s) | 284, 359, 936, 1228, 1438, 3685, 4139 |
| PpuMI | RGGWCCY | 1 cut(s) | 3766 |
| PscI | ACATGT | 1 cut(s) | 1374 |
| PsiI | TTATAA | 5 cut(s) | 1044, 1055, 2078, 3047, 3492 |
| Psp124BI | GAGCTC | 1 cut(s) | 2661 |
| Psp5II | RGGWCCY | 1 cut(s) | 3766 |
| Psp6I | CCWGG | 3 cut(s) | 759, 2673, 3534 |
| PspFI | CCCAGC | 3 cut(s) | 1598, 3588, 4183 |
| PspGI | CCWGG | 3 cut(s) | 759, 2673, 3534 |
| PspN4I | GGNNCC | 6 cut(s) | 272, 967, 975, 2065, 2159, 3540 |
| PspPPI | RGGWCCY | 1 cut(s) | 3766 |
| PstI | CTGCAG | 2 cut(s) | 2797, 3059 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3172 |
| PsuI | RGATCY | 1 cut(s) | 3433 |
| PsyI | GACNNNGTC | 1 cut(s) | 2390 |
| PvuII | CAGCTG | 2 cut(s) | 3902, 4213 |
| RsaI | GTAC | 8 cut(s) | 154, 704, 827, 975, 3009, 3053, 4016, 4039 |
| RsaNI | GTAC | 8 cut(s) | 153, 703, 826, 974, 3008, 3052, 4015, 4038 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1377, 1430, 2576, 3308, 3597 |
| SacI | GAGCTC | 1 cut(s) | 2661 |
| SalI | GTCGAC | 1 cut(s) | 3066 |
| SapI | GCTCTTC | 1 cut(s) | 142 |
| ScaI | AGTACT | 1 cut(s) | 154 |
| SchI | GAGTC | 7 cut(s) | 284, 359, 937, 1229, 1438, 3686, 4139 |
| ScrFI | CCNGG | 5 cut(s) | 761, 801, 2061, 2675, 3536 |
| SduI | GDGCHC | 3 cut(s) | 22, 2310, 2661 |
| SfcI | CTRYAG | 3 cut(s) | 241, 2793, 3055 |
| Sfr274I | CTCGAG | 1 cut(s) | 2742 |
| SinI | GGWCC | 6 cut(s) | 874, 919, 2588, 3234, 3766, 4162 |
| SlaI | CTCGAG | 1 cut(s) | 2742 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1377, 1430, 2576, 3308, 3597 |
| SmlI | CTYRAG | 4 cut(s) | 1617, 2742, 2939, 4166 |
| SmoI | CTYRAG | 4 cut(s) | 1617, 2742, 2939, 4166 |
| SphI | GCATGC | 1 cut(s) | 4053 |
| SseBI | AGGCCT | 1 cut(s) | 3534 |
| SsiI | CCGC | 6 cut(s) | 5, 42, 120, 1201, 1792, 4239 |
| SspI | AATATT | 1 cut(s) | 783 |
| SstI | GAGCTC | 1 cut(s) | 2661 |
| StuI | AGGCCT | 1 cut(s) | 3534 |
| StyD4I | CCNGG | 5 cut(s) | 759, 799, 2059, 2673, 3534 |
| StyI | CCWWGG | 7 cut(s) | 745, 969, 1593, 2130, 2779, 3723, 4406 |
| TaaI | ACNGT | 7 cut(s) | 817, 1468, 1541, 1754, 2977, 4037, 4458 |
| TaiI | ACGT | 3 cut(s) | 1253, 1730, 3446 |
| TaqI | TCGA | 6 cut(s) | 650, 1187, 1223, 1476, 2743, 3067 |
| TaqII | GACCGA | 1 cut(s) | 3222 |
| TatI | WGTACW | 6 cut(s) | 152, 825, 3007, 3051, 4014, 4037 |
| TauI | GCSGC | 2 cut(s) | 8, 1204 |
| TseFI | GTSAC | 3 cut(s) | 1246, 3661, 3678 |
| Tsp45I | GTSAC | 3 cut(s) | 1246, 3661, 3678 |
| TspGWI | ACGGA | 4 cut(s) | 733, 1153, 1520, 3779 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2390 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 510, 2302 |
| Vha464I | CTTAAG | 1 cut(s) | 2939 |
| VpaK11BI | GGWCC | 6 cut(s) | 874, 919, 2588, 3234, 3766, 4162 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 749 |
| XapI | RAATTY | 7 cut(s) | 394, 688, 2039, 2929, 3268, 3501, 4298 |
| XceI | RCATGY | 4 cut(s) | 1378, 2028, 2057, 4053 |
| XhoI | CTCGAG | 1 cut(s) | 2742 |
| XmiI | GTMKAC | 4 cut(s) | 675, 2421, 2985, 3067 |
| XmnI | GAANNNNTTC | 1 cut(s) | 121 |
| ZrmI | AGTACT | 1 cut(s) | 154 |
| Zsp2I | ATGCAT | 1 cut(s) | 3955 |