Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002995

Physical Location & Seq

Genomic Coordinates Reverse (-)

18206907 .. 18213647

Gene Structure 6741 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G177200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGAATTCTCCATCCACCCAGTTTGTCACCTCAAGAAGGATGGGGGCCTATGAGCCTATCCACCAGATTAGCATGTGGGAGGAAAGCTTTAAGAGTAATGGTAATTTTAATGCCTCAGCATCAATGATAGTTGATGCAGACACAAAACTAGATAATCAGTCAGAGGATGCTTCTCATGGAATCCTGGGGCCTTCTAGCAAGTATGACCAAGAAGCAACTAAACCTACAGACAAGGTGCAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAAAGTCGGATGCGAAAGAAGGCCTATGTTCAGCAGTTAGAAACAAGTCGTTTGAAGCTTATTCAATTAGAGCAAGAGCTTGACCGAGCAAGACAACAGCAGGGTATTTATATTGGCAGTGGACTGGATGCTAGTCCTCTAGGATTCTCGGGCACTATAAACTCAGGTGTAACAACATTTGAGATGGAGTATGGACACTGGGTGGAAGAACAAAATAGGCAAATTAATGAACTGAGGACTGCTTTGCATGCTCATATAAGTGATATAGAGCTTCGATTCCTTGTGGATAGTGGCATGAGTCACTATTTTGAACTTTTCAGCATGAAATTAACTGCCGCAAAAGCTGACGTATTCTATGTGATGTCTGGGATGTGGAAAACATCAGCTGAACGGTTTTTCTCGTGGATTGGAGGGTTTCGCCCTTCAGAGATTCTTAAGGTTCTTCAGCCTCACCTTGACCCCTTGACAGACCAACAAGTTTTGGATGTTTACAATCTTAGGCAATCATGTCAACAAGCAGAAGATGCTCTTTCGCAAGGTATGGATAAACTCCAGCTCACTCTGGCTGACACTGTGGCAGCTGGTCAACTGGGTGAAGGTAGTTATGTGCCACAGATGGCTAATGCCATGCAGAAATTGGAAGAGCTCGTTAGCTTTGTGCAACAGGCTGATAATCTTCGGCGAGGGACCTTACAGCAGATGTCGTGCATCCTAACAATCCGCCAGGCAGCTCGCGGCCTTCTTGCCTTGGGGGAGTACTTCCAACGCCTTCGGGCTTTGAGCTCGCTCTGGGCTACTCGTCCTCGTGAGCCTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1

Protein Analysis

364

Amino Acids

40.99

Weight (kDa)

6.41

Isoelectric Point (pI)

49.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10030 AT5G10030 AT5G10030 AT5G10030 AT5G10030 AT5G65210 AT5G65210 AT5G65210 AT5G65210 AT5G65210 AT5G65210
fragaria_vesca	FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900
malus_domestica	MD01G1021600.v1.1 MD15G1330400.v1.1
prunus_persica	Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1
pyrus_communis	pycom01g05010
rosa_chinensis	RchiOBHm_Chr2g0115911
rosa_multiflora	Rmu_ssc0000197.1_g000009
rosa_roxburghii	Rroxscaffold_2G00127690 Rroxscaffold_2G00128520
rosa_rugosa	Rorug02G0200900 Rorug02G0201000 Rorug02G0201100 Rorug02G0201200
rosa_samantha	Rh2BG268900 Rh2CG264400 Rh2DG266100
rosa_wichuraiana	Rw2G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	247
AccII	CGCG	1 cut(s)	1008
AciI	CCGC	3 cut(s)	609, 994, 1008
AcsI	RAATTY	1 cut(s)	4
AcuI	CTGAAG	2 cut(s)	681, 701
AcyI	GRCGYC	1 cut(s)	244
AdeI	CACNNNGTG	1 cut(s)	475
AfaI	GTAC	1 cut(s)	1031
AfiI	CCNNNNNNNGG	1 cut(s)	36
AflII	CTTAAG	1 cut(s)	707
AgsI	TTSAA	3 cut(s)	328, 338, 584
AjnI	CCWGG	2 cut(s)	183, 996
Alw21I	GWGCWC	2 cut(s)	921, 1058
Ama87I	CYCGRG	1 cut(s)	421
AoxI	GGCC	4 cut(s)	45, 188, 294, 1009
ApeKI	GCWGC	3 cut(s)	266, 851, 1001
ApoI	RAATTY	1 cut(s)	4
AseI	ATTAAT	1 cut(s)	498
AspS9I	GGNCC	3 cut(s)	45, 188, 960
AsuHPI	GGTGA	3 cut(s)	19, 716, 878
AvaI	CYCGRG	1 cut(s)	421
AvaII	GGWCC	1 cut(s)	960
BaeGI	GKGCMC	1 cut(s)	428
BanII	GRGCYC	2 cut(s)	921, 1058
BauI	CACGAG	2 cut(s)	673, 1077
Bbv12I	GWGCWC	2 cut(s)	921, 1058
BbvCI	CCTCAGC	1 cut(s)	115
BbvI	GCAGC	3 cut(s)	253, 863, 1013
BccI	CCATC	4 cut(s)	19, 34, 451, 883
BciT130I	CCWGG	2 cut(s)	185, 998
BfaI	CTAG	4 cut(s)	149, 195, 405, 413
BfmI	CTRYAG	1 cut(s)	225
BfrI	CTTAAG	1 cut(s)	707
BisI	GCNGC	5 cut(s)	267, 609, 852, 1002, 1009
BlsI	GCNGC	5 cut(s)	268, 610, 853, 1003, 1010
BmcAI	AGTACT	1 cut(s)	1031
Bme1390I	CCNGG	2 cut(s)	185, 998
Bme18I	GGWCC	1 cut(s)	960
BmeT110I	CYCGRG	1 cut(s)	421
BmgT120I	GGNCC	3 cut(s)	45, 188, 960
BmiI	GGNNCC	3 cut(s)	46, 189, 961
BmrFI	CCNGG	2 cut(s)	185, 998
BmrI	ACTGGG	3 cut(s)	13, 481, 872
BmsI	GCATC	7 cut(s)	124, 128, 157, 273, 391, 787, 990
BmuI	ACTGGG	3 cut(s)	13, 481, 872
BpmI	CTGGAG	1 cut(s)	809
Bpu10I	CCTNAGC	1 cut(s)	115
BpuEI	CTTGAG	1 cut(s)	16
BsaHI	GRCGYC	1 cut(s)	244
BsaJI	CCNNGG	2 cut(s)	184, 1020
Bsc4I	CCNNNNNNNGG	1 cut(s)	36
Bse1I	ACTGG	4 cut(s)	19, 402, 476, 867
BseBI	CCWGG	2 cut(s)	185, 998
BseDI	CCNNGG	2 cut(s)	184, 1020
BseGI	GGATG	8 cut(s)	11, 45, 172, 288, 406, 648, 763, 981
BseLI	CCNNNNNNNGG	1 cut(s)	36
BseMII	CTCAG	3 cut(s)	129, 450, 497
BseNI	ACTGG	4 cut(s)	19, 402, 476, 867
BseSI	GKGCMC	1 cut(s)	428
BseXI	GCAGC	3 cut(s)	253, 863, 1013
Bsh1236I	CGCG	1 cut(s)	1008
BshFI	GGCC	4 cut(s)	47, 190, 296, 1011
BsiHKAI	GWGCWC	2 cut(s)	921, 1058
BsiHKCI	CYCGRG	1 cut(s)	421
BslFI	GGGAC	1 cut(s)	973
BslI	CCNNNNNNNGG	1 cut(s)	36
BsmFI	GGGAC	1 cut(s)	973
BsnI	GGCC	4 cut(s)	47, 190, 296, 1011
BsoBI	CYCGRG	1 cut(s)	421
Bsp1286I	GDGCHC	3 cut(s)	428, 921, 1058
BspACI	CCGC	3 cut(s)	609, 994, 1008
BspANI	GGCC	4 cut(s)	47, 190, 296, 1011
BspCNI	CTCAG	3 cut(s)	128, 449, 498
BspFNI	CGCG	1 cut(s)	1008
BspLI	GGNNCC	3 cut(s)	46, 189, 961
BspQI	GCTCTTC	1 cut(s)	909
BspTI	CTTAAG	1 cut(s)	707
BsrI	ACTGG	4 cut(s)	19, 402, 476, 867
BssECI	CCNNGG	2 cut(s)	184, 1020
BssNI	GRCGYC	1 cut(s)	244
BssSI	CACGAG	2 cut(s)	673, 1077
BssT1I	CCWWGG	1 cut(s)	1020
Bst2BI	CACGAG	2 cut(s)	673, 1077
Bst2UI	CCWGG	2 cut(s)	185, 998
Bst4CI	ACNGT	2 cut(s)	666, 847
Bst6I	CTCTTC	1 cut(s)	909
BstACI	GRCGYC	1 cut(s)	244
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstC8I	GCNNGC	4 cut(s)	522, 1006, 1058, 1086
BstDEI	CTNAG	4 cut(s)	115, 436, 506, 770
BstENI	CCTNNNNNAGG	1 cut(s)	34
BstF5I	GGATG	8 cut(s)	11, 45, 172, 288, 406, 648, 763, 981
BstFNI	CGCG	1 cut(s)	1008
BstMWI	GCNNNNNNNGC	3 cut(s)	521, 614, 797
BstNI	CCWGG	2 cut(s)	185, 998
BstNSI	RCATGY	2 cut(s)	76, 524
BstSCI	CCNGG	2 cut(s)	183, 996
BstSFI	CTRYAG	1 cut(s)	225
BstSLI	GKGCMC	1 cut(s)	428
BstUI	CGCG	1 cut(s)	1008
BstV1I	GCAGC	3 cut(s)	253, 863, 1013
BsuRI	GGCC	4 cut(s)	47, 190, 296, 1011
BtsCI	GGATG	8 cut(s)	11, 45, 172, 288, 406, 648, 763, 981
BtsI	GCAGTG	1 cut(s)	397
BtsIMutI	CAGTG	3 cut(s)	397, 469, 843
Cac8I	GCNNGC	4 cut(s)	522, 1006, 1058, 1086
Cfr13I	GGNCC	3 cut(s)	45, 188, 960
Csp6I	GTAC	1 cut(s)	1030
CspCI	CAANNNNNGTGG	2 cut(s)	4, 39
CviAII	CATG	7 cut(s)	73, 176, 521, 568, 595, 780, 901
CviQI	GTAC	1 cut(s)	1030
DdeI	CTNAG	4 cut(s)	115, 436, 506, 770
DraIII	CACNNNGTG	1 cut(s)	475
Eam1104I	CTCTTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	909
EciI	GGCGGA	1 cut(s)	983
Ecl136II	GAGCTC	2 cut(s)	919, 1056
Eco130I	CCWWGG	1 cut(s)	1020
Eco147I	AGGCCT	1 cut(s)	296
Eco24I	GRGCYC	2 cut(s)	921, 1058
Eco47I	GGWCC	1 cut(s)	960
Eco53kI	GAGCTC	2 cut(s)	919, 1056
Eco57I	CTGAAG	2 cut(s)	681, 701
Eco88I	CYCGRG	1 cut(s)	421
EcoICRI	GAGCTC	2 cut(s)	919, 1056
EcoNI	CCTNNNNNAGG	1 cut(s)	34
EcoO109I	RGGNCCY	3 cut(s)	45, 188, 960
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	183, 996
EcoT14I	CCWWGG	1 cut(s)	1020
EcoT38I	GRGCYC	2 cut(s)	921, 1058
ErhI	CCWWGG	1 cut(s)	1020
FaeI	CATG	7 cut(s)	76, 179, 524, 571, 598, 783, 904
FalI	AAGNNNNNCTT	2 cut(s)	786, 818
FaqI	GGGAC	1 cut(s)	973
FatI	CATG	7 cut(s)	72, 175, 520, 567, 594, 779, 900
Fnu4HI	GCNGC	5 cut(s)	267, 609, 852, 1002, 1009
FokI	GGATG	7 cut(s)	52, 179, 295, 413, 655, 770, 968
FriOI	GRGCYC	2 cut(s)	921, 1058
Fsp4HI	GCNGC	5 cut(s)	267, 609, 852, 1002, 1009
FspBI	CTAG	4 cut(s)	149, 195, 405, 413
GluI	GCNGC	5 cut(s)	267, 609, 852, 1002, 1009
GsuI	CTGGAG	1 cut(s)	809
HaeIII	GGCC	4 cut(s)	47, 190, 296, 1011
Hin1I	GRCGYC	1 cut(s)	244
Hin1II	CATG	7 cut(s)	76, 179, 524, 571, 598, 783, 904
HincII	GTYRAC	2 cut(s)	785, 860
HindII	GTYRAC	2 cut(s)	785, 860
HindIII	AAGCTT	2 cut(s)	85, 329
HinfI	GANTC	5 cut(s)	180, 417, 549, 571, 703
HphI	GGTGA	3 cut(s)	19, 716, 878
Hpy166II	GTNNAC	4 cut(s)	395, 763, 785, 860
Hpy188I	TCNGA	3 cut(s)	163, 282, 700
Hpy188III	TCNNGA	3 cut(s)	33, 260, 1079
Hpy8I	GTNNAC	4 cut(s)	395, 763, 785, 860
HpyAV	CCTTC	7 cut(s)	30, 201, 286, 705, 863, 1022, 1052
HpyCH4III	ACNGT	2 cut(s)	666, 847
HpyCH4IV	ACGT	2 cut(s)	244, 621
HpyCH4V	TGCA	7 cut(s)	137, 238, 251, 520, 904, 934, 981
HpyF10VI	GCNNNNNNNGC	3 cut(s)	521, 614, 797
HpyF3I	CTNAG	4 cut(s)	115, 436, 506, 770
HpySE526I	ACGT	2 cut(s)	244, 621
Hsp92I	GRCGYC	1 cut(s)	244
Hsp92II	CATG	7 cut(s)	76, 179, 524, 571, 598, 783, 904
LguI	GCTCTTC	1 cut(s)	909
Lsp1109I	GCAGC	3 cut(s)	253, 863, 1013
LweI	GCATC	7 cut(s)	124, 128, 157, 273, 391, 787, 990
MaeI	CTAG	4 cut(s)	149, 195, 405, 413
MaeII	ACGT	2 cut(s)	244, 621
MaeIII	GTNAC	3 cut(s)	25, 442, 572
MboII	GAAGA	5 cut(s)	491, 707, 806, 926, 941
MhlI	GDGCHC	3 cut(s)	428, 921, 1058
MluCI	AATT	6 cut(s)	4, 103, 338, 495, 599, 908
MlyI	GAGTC	1 cut(s)	580
MmeI	TCCRAC	2 cut(s)	260, 1060
MseI	TTAA	5 cut(s)	90, 108, 498, 602, 708
MslI	CAYNNNNRTG	1 cut(s)	531
MspA1I	CMGCKG	2 cut(s)	659, 854
MspCI	CTTAAG	1 cut(s)	707
MspR9I	CCNGG	2 cut(s)	185, 998
MvaI	CCWGG	2 cut(s)	185, 998
MvnI	CGCG	1 cut(s)	1008
MwoI	GCNNNNNNNGC	3 cut(s)	521, 614, 797
NlaIII	CATG	7 cut(s)	76, 179, 524, 571, 598, 783, 904
NlaIV	GGNNCC	3 cut(s)	46, 189, 961
NmuCI	GTSAC	2 cut(s)	25, 572
NspI	RCATGY	2 cut(s)	76, 524
PaeI	GCATGC	1 cut(s)	524
PceI	AGGCCT	1 cut(s)	296
PciSI	GCTCTTC	1 cut(s)	909
PfeI	GAWTC	4 cut(s)	180, 417, 549, 703
PkrI	GCNGC	5 cut(s)	268, 610, 853, 1003, 1010
PleI	GAGTC	1 cut(s)	579
PpsI	GAGTC	1 cut(s)	579
PpuMI	RGGWCCY	1 cut(s)	960
PshBI	ATTAAT	1 cut(s)	498
Psp124BI	GAGCTC	2 cut(s)	921, 1058
Psp5II	RGGWCCY	1 cut(s)	960
Psp6I	CCWGG	2 cut(s)	183, 996
PspGI	CCWGG	2 cut(s)	183, 996
PspN4I	GGNNCC	3 cut(s)	46, 189, 961
PspPI	GGNCC	3 cut(s)	45, 188, 960
PspPPI	RGGWCCY	1 cut(s)	960
PvuII	CAGCTG	2 cut(s)	659, 854
RsaI	GTAC	1 cut(s)	1031
RsaNI	GTAC	1 cut(s)	1030
RseI	CAYNNNNRTG	1 cut(s)	531
SacI	GAGCTC	2 cut(s)	921, 1058
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	5 cut(s)	90, 108, 498, 602, 708
SatI	GCNGC	5 cut(s)	267, 609, 852, 1002, 1009
Sau96I	GGNCC	3 cut(s)	45, 188, 960
ScaI	AGTACT	1 cut(s)	1031
SchI	GAGTC	1 cut(s)	580
ScrFI	CCNGG	2 cut(s)	185, 998
SduI	GDGCHC	3 cut(s)	428, 921, 1058
SfaNI	GCATC	7 cut(s)	124, 128, 157, 273, 391, 787, 990
SfcI	CTRYAG	1 cut(s)	225
SinI	GGWCC	1 cut(s)	960
SmiMI	CAYNNNNRTG	1 cut(s)	531
SmlI	CTYRAG	2 cut(s)	31, 707
SmoI	CTYRAG	2 cut(s)	31, 707
SphI	GCATGC	1 cut(s)	524
Sse9I	AATT	6 cut(s)	4, 103, 338, 495, 599, 908
SseBI	AGGCCT	1 cut(s)	296
SsiI	CCGC	3 cut(s)	609, 994, 1008
SspMI	CTAG	4 cut(s)	149, 195, 405, 413
SstI	GAGCTC	2 cut(s)	921, 1058
StuI	AGGCCT	1 cut(s)	296
StyD4I	CCNGG	2 cut(s)	183, 996
StyI	CCWWGG	1 cut(s)	1020
TaaI	ACNGT	2 cut(s)	666, 847
TaiI	ACGT	2 cut(s)	247, 624
TaqI	TCGA	1 cut(s)	547
TaqII	GACCGA	1 cut(s)	372
TasI	AATT	6 cut(s)	4, 103, 338, 495, 599, 908
TatI	WGTACW	1 cut(s)	1029
TauI	GCSGC	2 cut(s)	611, 1011
TfiI	GAWTC	4 cut(s)	180, 417, 549, 703
Tru1I	TTAA	5 cut(s)	90, 108, 498, 602, 708
Tru9I	TTAA	5 cut(s)	90, 108, 498, 602, 708
TscAI	CASTG	3 cut(s)	397, 476, 850
TseFI	GTSAC	2 cut(s)	25, 572
TseI	GCWGC	3 cut(s)	266, 851, 1001
Tsp45I	GTSAC	2 cut(s)	25, 572
TspDTI	ATGAA	3 cut(s)	17, 516, 611
TspRI	CASTG	3 cut(s)	397, 476, 850
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	1 cut(s)	960
VspI	ATTAAT	1 cut(s)	498
XagI	CCTNNNNNAGG	1 cut(s)	34
XapI	RAATTY	1 cut(s)	4
XceI	RCATGY	2 cut(s)	76, 524
XcmI	CCANNNNNNNNNTGG	1 cut(s)	907
XspI	CTAG	4 cut(s)	149, 195, 405, 413
ZraI	GACGTC	1 cut(s)	245
ZrmI	AGTACT	1 cut(s)	1031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.