Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002995

Physical Location & Seq

Genomic Coordinates Forward (+)

18799404 .. 18803206

Gene Structure 3803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0200900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGCAACTACAAAAGCCAATCTTCCAGACCCATCTTCCACCACAACCAAGCTCACAGCTTTTTGCTCAGACCCATCTCCATAACCATAAACCTCACCTTCCCACAATCTCTCTCTGCTTCCGTAAACCCACATCACCAACACCCAAATCAACAACACCCGAAAGCTCTACCAGTTCCAGCTGCATTCCAACAGAAACAGAGAGGAGAACCAAACAGGGCCATCTTTCTTCTTCTTCTTCTTCTTCTGGGTCTTGTAATTCATCGATTAATTCAATGATGGCGATCGATCCGTATGTTGTGTGGACGTTCTTTGCTTCTTTATTGGGTTTTCTTCTTCTCTCCCTTCTCCGCCGACGTAATTACGGTAATGCCACCGCACAGGACAAGGGAATGGTTCAAAACAAGAACAAGACGACCGAGAATCATGTTTCTGAAGAATGTGTGAAGAGCTCCGGCGACGGAGACTTCCGGCAGGAGTTCGGCTCCGGAACTGACGTCATCATCGTTGGCGCCGGTGTTGCTGGCGCTGCTCTTGCACACACCCTTGGCAAGGAGGGAAAACGTGTTCGTGTGATTGAAAGAGACTTGACAGAGCCGGATCGAATTGTTGGCGAACTTCTCCAGCCTGGGGGATACCTGAAGCTGATTGACTTGGGACTTGAAGATTGTGTTGAGGAAATCGATGCTCAGCGAGTTCTTGGATATGCTCTTTTTAAGGATGGGAAGAATACTACACTGTCCTATCCCCTGGAACAGTTCCACTCAGATGTGGCGGGTAGAAGTTTCCACAATGGGCGATTCATACAGAGGATGAGAGAAAAAGCTGCTACTCTTCCCAATGTACAACTGGAGCAAGGTACAGTCACATCCCTGCTTGAAGAAAATGGGACAATTACGGGGGTTCAGTACAAAACTAAGGATGGTCAAGAACTTCAAGCTCATGCTCCTCTTACAATTGTCTGCGATGGTTGCTTCTCAAATCTGCGCCGCACTCTTTGTAAGCCTCAGGTAGAAGTGCCCTCTTGTTTTGTGGGATTAATTTTGGAAAATTGTGAACTCCCATTTGCAAATCACGGGCATGTTATTCTTGCTGATCCATCTCCAATCCTGTTTTACCAAATCAGTAGTACAGAGGTCCGCTGTTTAGTTGATGTGCCCGGCCAGAAAGTACCTCCCATCACTAATGGAGCAATGGCTAACTATTTGAAGAATGTGGTAGCTCCACAGCTTCCACCTGAACTTCATGATCCCTTCATATCTGCAATTGACAAAGGAAGTATTAGAACTATGCCGAATAGAAGCATGCCAGCCAATCCGCAGCCAACTCCTGGAGCCCTTTTAATGGGTGATGCTTTCAATATGCGTCATCCTTTAACTGGTGGAGGAATGACTGTGGCACTATCGGACATTGTTATACTCAGGGATCTTCTTAAACCATTACGTGACATAAATGATGCTTCTTCATTGTGCAACTACCTAGAATCCTTTTATACCTTGCGCAAGCCAGTTGCATCTACAATAAACACCTTGGCAGGTGCCCTATACAAGGTGTTCTCTGCCTCCCCTGACCAAGCAAGGAAGGAGATGCGCCAAGCATGCTTTGACTATCTGAGCCTTGGAGGTGCCTGTTCAACTGGACCAGTGGCTCTGCTCTCTGGTCTAAATCCTCGCCCGCTGAGTTTAGTTCTCCATTTTTTTGCTGTTGCGGTATATGGTGTTGGACGTTTGCTTCTACCATTTCCTTCACCGAAACGCATGTGGATTGGAGTGAGATTAATCTGGAGCGCAGTAGGCATAATATTTCCCATCATCAAGGCAGAAGGTGTGAGACAGATGTTCTTTCCTGCTACTATCCCAGCTTGTCATAGGGCTCCTCCTGCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1

Protein Analysis

628

Amino Acids

68.47

Weight (kDa)

8.62

Isoelectric Point (pI)

49.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	164 - 481	9.6e-20	FAD binding domain
SE	PF08491	314 - 587	4.1e-121	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10030 AT5G10030 AT5G10030 AT5G10030 AT5G10030 AT5G65210 AT5G65210 AT5G65210 AT5G65210 AT5G65210 AT5G65210
fragaria_vesca	FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900 FvH4_1g21900
malus_domestica	MD01G1021600.v1.1 MD15G1330400.v1.1
prunus_persica	Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1 Prupe.6G177200_v2.0.a1
pyrus_communis	pycom01g05010
rosa_chinensis	RchiOBHm_Chr2g0115911
rosa_multiflora	Rmu_ssc0000197.1_g000009
rosa_roxburghii	Rroxscaffold_2G00127690 Rroxscaffold_2G00128520
rosa_rugosa	Rorug02G0200900 Rorug02G0201000 Rorug02G0201100 Rorug02G0201200
rosa_samantha	Rh2BG268900 Rh2CG264400 Rh2DG266100
rosa_wichuraiana	Rw2G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1523
AatII	GACGTC	1 cut(s)	498
Acc16I	TGCGCA	1 cut(s)	1499
Acc36I	ACCTGC	1 cut(s)	1523
AccB1I	GGYRCC	3 cut(s)	509, 1535, 1622
AccB7I	CCANNNNNTGG	1 cut(s)	1328
AccIII	TCCGGA	1 cut(s)	485
AciI	CCGC	8 cut(s)	349, 375, 773, 988, 1138, 1316, 1673, 1706
AclWI	GGATC	5 cut(s)	281, 606, 1088, 1241, 1431
AcoI	YGGCCR	1 cut(s)	1159
AcuI	CTGAAG	2 cut(s)	453, 659
AcyI	GRCGYC	2 cut(s)	495, 510
AfaI	GTAC	5 cut(s)	843, 859, 908, 1129, 1170
AfiI	CCNNNNNNNGG	6 cut(s)	550, 628, 1328, 1342, 1376, 1546
AflIII	ACRYGT	1 cut(s)	562
AgsI	TTSAA	9 cut(s)	273, 398, 578, 662, 878, 935, 1207, 1357, 1632
AjnI	CCWGG	3 cut(s)	625, 747, 1327
AloI	GAACNNNNNNTCC	2 cut(s)	549, 581
Alw21I	GWGCWC	1 cut(s)	452
Alw26I	GTCTC	3 cut(s)	456, 576, 1822
AlwI	GGATC	5 cut(s)	281, 606, 1088, 1241, 1431
Aor13HI	TCCGGA	1 cut(s)	485
AoxI	GGCC	2 cut(s)	217, 1159
ApeKI	GCWGC	4 cut(s)	180, 527, 824, 1318
AseI	ATTAAT	3 cut(s)	267, 1037, 1775
AspLEI	GCGC	6 cut(s)	512, 527, 987, 1500, 1590, 1787
AspS9I	GGNCC	3 cut(s)	217, 1135, 1637
AsuC2I	CCSGG	1 cut(s)	1158
AsuHPI	GGTGA	4 cut(s)	86, 126, 1358, 1737
AvaII	GGWCC	2 cut(s)	1135, 1637
AxyI	CCTNAGG	1 cut(s)	1005
BaeGI	GKGCMC	3 cut(s)	1020, 1158, 1540
BanI	GGYRCC	3 cut(s)	509, 1535, 1622
BanII	GRGCYC	3 cut(s)	452, 1336, 1873
Bbv12I	GWGCWC	1 cut(s)	452
BbvI	GCAGC	4 cut(s)	167, 514, 811, 1330
BciT130I	CCWGG	3 cut(s)	627, 749, 1329
BciVI	GTATCC	1 cut(s)	626
BcnI	CCSGG	1 cut(s)	1158
BcoDI	GTCTC	3 cut(s)	456, 576, 1822
BfaI	CTAG	1 cut(s)	1478
BfoI	RGCGCY	2 cut(s)	513, 528
BfuAI	ACCTGC	1 cut(s)	1523
BfuI	GTATCC	1 cut(s)	626
BisI	GCNGC	5 cut(s)	181, 528, 825, 988, 1319
BlpI	GCTNAGC	1 cut(s)	687
BlsI	GCNGC	5 cut(s)	182, 529, 826, 989, 1320
Bme1390I	CCNGG	4 cut(s)	627, 749, 1158, 1329
Bme18I	GGWCC	2 cut(s)	1135, 1637
BmgT120I	GGNCC	3 cut(s)	217, 1135, 1637
BmiI	GGNNCC	6 cut(s)	484, 511, 1333, 1537, 1624, 1872
BmrFI	CCNGG	4 cut(s)	627, 749, 1158, 1329
BmsI	GCATC	5 cut(s)	673, 1339, 1444, 1520, 1575
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
BpmI	CTGGAG	4 cut(s)	605, 869, 1350, 1801
Bpu1102I	GCTNAGC	1 cut(s)	687
BpuMI	CCSGG	1 cut(s)	1158
Bsa29I	ATCGAT	3 cut(s)	263, 285, 681
BsaAI	YACGTR	1 cut(s)	1442
BsaBI	GATNNNNATC	1 cut(s)	281
BsaHI	GRCGYC	2 cut(s)	495, 510
BsaJI	CCNNGG	5 cut(s)	544, 626, 747, 1527, 1615
BsaWI	WCCGGW	1 cut(s)	485
Bsc4I	CCNNNNNNNGG	6 cut(s)	550, 628, 1328, 1342, 1376, 1546
Bse118I	RCCGGY	1 cut(s)	512
Bse1I	ACTGG	6 cut(s)	171, 852, 1381, 1505, 1639, 1640
Bse21I	CCTNAGG	1 cut(s)	1005
Bse3DI	GCAATG	1 cut(s)	1197
Bse8I	GATNNNNATC	1 cut(s)	281
BseAI	TCCGGA	1 cut(s)	485
BseBI	CCWGG	3 cut(s)	627, 749, 1329
BseCI	ATCGAT	3 cut(s)	263, 285, 681
BseDI	CCNNGG	5 cut(s)	544, 626, 747, 1527, 1615
BseGI	GGATG	5 cut(s)	724, 816, 866, 925, 1366
BseJI	GATNNNNATC	1 cut(s)	281
BseLI	CCNNNNNNNGG	6 cut(s)	550, 628, 1328, 1342, 1376, 1546
BseMI	GCAATG	1 cut(s)	1197
BseMII	CTCAG	7 cut(s)	80, 701, 777, 1019, 1432, 1601, 1667
BseNI	ACTGG	6 cut(s)	171, 852, 1381, 1505, 1639, 1640
BseRI	GAGGAG	3 cut(s)	217, 936, 1863
BseSI	GKGCMC	3 cut(s)	1020, 1158, 1540
BseXI	GCAGC	4 cut(s)	167, 514, 811, 1330
BseYI	CCCAGC	1 cut(s)	1855
Bsh1285I	CGRYCG	2 cut(s)	285, 417
BshFI	GGCC	2 cut(s)	219, 1161
BshNI	GGYRCC	3 cut(s)	509, 1535, 1622
BshVI	ATCGAT	3 cut(s)	263, 285, 681
BsiEI	CGRYCG	2 cut(s)	285, 417
BsiHKAI	GWGCWC	1 cut(s)	452
BsiSI	CCGG	6 cut(s)	453, 469, 486, 513, 596, 1158
BslFI	GGGAC	2 cut(s)	669, 901
BslI	CCNNNNNNNGG	6 cut(s)	550, 628, 1328, 1342, 1376, 1546
BsmAI	GTCTC	3 cut(s)	456, 576, 1822
BsmFI	GGGAC	2 cut(s)	669, 901
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	2 cut(s)	219, 1161
Bsp1286I	GDGCHC	6 cut(s)	452, 1020, 1158, 1336, 1540, 1873
Bsp13I	TCCGGA	1 cut(s)	485
Bsp1407I	TGTACA	1 cut(s)	841
Bsp143I	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
Bsp1720I	GCTNAGC	1 cut(s)	687
BspACI	CCGC	8 cut(s)	349, 375, 773, 988, 1138, 1316, 1673, 1706
BspANI	GGCC	2 cut(s)	219, 1161
BspCNI	CTCAG	7 cut(s)	79, 700, 776, 1018, 1431, 1602, 1668
BspDI	ATCGAT	3 cut(s)	263, 285, 681
BspEI	TCCGGA	1 cut(s)	485
BspHI	TCATGA	1 cut(s)	1243
BspLI	GGNNCC	6 cut(s)	484, 511, 1333, 1537, 1624, 1872
BspMI	ACCTGC	1 cut(s)	1523
BspPI	GGATC	5 cut(s)	281, 606, 1088, 1241, 1431
BspQI	GCTCTTC	1 cut(s)	440
BspT107I	GGYRCC	3 cut(s)	509, 1535, 1622
BsrDI	GCAATG	1 cut(s)	1197
BsrFI	RCCGGY	1 cut(s)	512
BsrGI	TGTACA	1 cut(s)	841
BsrI	ACTGG	6 cut(s)	171, 852, 1381, 1505, 1639, 1640
BssAI	RCCGGY	1 cut(s)	512
BssECI	CCNNGG	5 cut(s)	544, 626, 747, 1527, 1615
BssMI	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
BssNI	GRCGYC	2 cut(s)	495, 510
BssT1I	CCWWGG	3 cut(s)	544, 1527, 1615
Bst2UI	CCWGG	3 cut(s)	627, 749, 1329
Bst4CI	ACNGT	5 cut(s)	365, 738, 756, 862, 1393
Bst6I	CTCTTC	2 cut(s)	440, 837
BstACI	GRCGYC	2 cut(s)	495, 510
BstAUI	TGTACA	1 cut(s)	841
BstBAI	YACGTR	1 cut(s)	1442
BstC8I	GCNNGC	6 cut(s)	523, 1304, 1308, 1502, 1597, 1673
BstDEI	CTNAG	8 cut(s)	66, 687, 763, 915, 1005, 1418, 1610, 1676
BstENI	CCTNNNNNAGG	2 cut(s)	548, 1544
BstF5I	GGATG	5 cut(s)	724, 816, 866, 925, 1366
BstH2I	RGCGCY	2 cut(s)	513, 528
BstHHI	GCGC	6 cut(s)	512, 527, 987, 1500, 1590, 1787
BstKTI	GATC	6 cut(s)	285, 289, 601, 1096, 1249, 1426
BstMAI	GTCTC	3 cut(s)	456, 576, 1822
BstMBI	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
BstMCI	CGRYCG	2 cut(s)	285, 417
BstMWI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 969, 1596, 1791, 1877
BstNI	CCWGG	3 cut(s)	627, 749, 1329
BstNSI	RCATGY	4 cut(s)	1082, 1306, 1599, 1759
BstSCI	CCNGG	4 cut(s)	625, 747, 1156, 1327
BstSLI	GKGCMC	3 cut(s)	1020, 1158, 1540
BstV1I	GCAGC	4 cut(s)	167, 514, 811, 1330
BstX2I	RGATCY	1 cut(s)	1423
BstYI	RGATCY	1 cut(s)	1423
Bsu15I	ATCGAT	3 cut(s)	263, 285, 681
Bsu36I	CCTNAGG	1 cut(s)	1005
BsuI	GTATCC	1 cut(s)	626
BsuRI	GGCC	2 cut(s)	219, 1161
BsuTUI	ATCGAT	3 cut(s)	263, 285, 681
BtgZI	GCGATG	1 cut(s)	978
BtsCI	GGATG	5 cut(s)	724, 816, 866, 925, 1366
BtsIMutI	CAGTG	2 cut(s)	734, 1647
BveI	ACCTGC	1 cut(s)	1523
Cac8I	GCNNGC	6 cut(s)	523, 1304, 1308, 1502, 1597, 1673
CciI	TCATGA	1 cut(s)	1243
CfoI	GCGC	6 cut(s)	512, 527, 987, 1500, 1590, 1787
Cfr10I	RCCGGY	1 cut(s)	512
Cfr13I	GGNCC	3 cut(s)	217, 1135, 1637
ClaI	ATCGAT	3 cut(s)	263, 285, 681
CseI	GACGC	1 cut(s)	1352
Csp6I	GTAC	5 cut(s)	842, 858, 907, 1128, 1169
CviAII	CATG	7 cut(s)	425, 941, 1079, 1244, 1303, 1596, 1756
CviQI	GTAC	5 cut(s)	842, 858, 907, 1128, 1169
DdeI	CTNAG	8 cut(s)	66, 687, 763, 915, 1005, 1418, 1610, 1676
DinI	GGCGCC	1 cut(s)	511
DpnI	GATC	6 cut(s)	284, 288, 600, 1095, 1248, 1425
DpnII	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
EaeI	YGGCCR	1 cut(s)	1159
Eam1104I	CTCTTC	2 cut(s)	440, 837
EarI	CTCTTC	2 cut(s)	440, 837
EciI	GGCGGA	1 cut(s)	338
Ecl136II	GAGCTC	1 cut(s)	450
Eco130I	CCWWGG	3 cut(s)	544, 1527, 1615
Eco24I	GRGCYC	3 cut(s)	452, 1336, 1873
Eco47I	GGWCC	2 cut(s)	1135, 1637
Eco53kI	GAGCTC	1 cut(s)	450
Eco57I	CTGAAG	2 cut(s)	453, 659
Eco81I	CCTNAGG	1 cut(s)	1005
EcoICRI	GAGCTC	1 cut(s)	450
EcoNI	CCTNNNNNAGG	2 cut(s)	548, 1544
EcoRII	CCWGG	3 cut(s)	625, 747, 1327
EcoT14I	CCWWGG	3 cut(s)	544, 1527, 1615
EcoT38I	GRGCYC	3 cut(s)	452, 1336, 1873
EgeI	GGCGCC	1 cut(s)	511
EheI	GGCGCC	1 cut(s)	511
ErhI	CCWWGG	3 cut(s)	544, 1527, 1615
FaeI	CATG	7 cut(s)	428, 944, 1082, 1247, 1306, 1599, 1759
FalI	AAGNNNNNCTT	1 cut(s)	37
FaqI	GGGAC	2 cut(s)	669, 901
FatI	CATG	7 cut(s)	424, 940, 1078, 1243, 1302, 1595, 1755
FauI	CCCGC	2 cut(s)	766, 1680
Fnu4HI	GCNGC	5 cut(s)	181, 528, 825, 988, 1319
FokI	GGATG	5 cut(s)	731, 823, 853, 932, 1353
FriOI	GRGCYC	3 cut(s)	452, 1336, 1873
Fsp4HI	GCNGC	5 cut(s)	181, 528, 825, 988, 1319
FspBI	CTAG	1 cut(s)	1478
FspI	TGCGCA	1 cut(s)	1499
GlaI	GCGC	6 cut(s)	511, 526, 986, 1499, 1589, 1786
GluI	GCNGC	5 cut(s)	181, 528, 825, 988, 1319
GsaI	CCCAGC	1 cut(s)	1859
GsuI	CTGGAG	4 cut(s)	605, 869, 1350, 1801
HaeII	RGCGCY	2 cut(s)	513, 528
HaeIII	GGCC	2 cut(s)	219, 1161
HapII	CCGG	6 cut(s)	453, 469, 486, 513, 596, 1158
HgaI	GACGC	1 cut(s)	1352
HhaI	GCGC	6 cut(s)	512, 527, 987, 1500, 1590, 1787
Hin1I	GRCGYC	2 cut(s)	495, 510
Hin1II	CATG	7 cut(s)	428, 944, 1082, 1247, 1306, 1599, 1759
Hin6I	GCGC	6 cut(s)	510, 525, 985, 1498, 1588, 1785
HinP1I	GCGC	6 cut(s)	510, 525, 985, 1498, 1588, 1785
HinfI	GANTC	3 cut(s)	421, 798, 1481
HpaII	CCGG	6 cut(s)	453, 469, 486, 513, 596, 1158
HphI	GGTGA	4 cut(s)	86, 126, 1358, 1737
Hpy166II	GTNNAC	3 cut(s)	125, 303, 1055
Hpy188I	TCNGA	5 cut(s)	69, 433, 766, 1405, 1611
Hpy188III	TCNNGA	5 cut(s)	25, 486, 926, 1244, 1780
Hpy8I	GTNNAC	3 cut(s)	125, 303, 1055
Hpy99I	CGWCG	2 cut(s)	357, 461
HpyAV	CCTTC	6 cut(s)	107, 353, 1261, 1573, 1752, 1814
HpyCH4III	ACNGT	5 cut(s)	365, 738, 756, 862, 1393
HpyCH4IV	ACGT	6 cut(s)	305, 355, 495, 562, 1441, 1723
HpyCH4V	TGCA	7 cut(s)	4, 183, 536, 1067, 1262, 1470, 1511
HpyF10VI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 969, 1596, 1791, 1877
HpyF3I	CTNAG	8 cut(s)	66, 687, 763, 915, 1005, 1418, 1610, 1676
HpySE526I	ACGT	6 cut(s)	305, 355, 495, 562, 1441, 1723
Hsp92I	GRCGYC	2 cut(s)	495, 510
Hsp92II	CATG	7 cut(s)	428, 944, 1082, 1247, 1306, 1599, 1759
HspAI	GCGC	6 cut(s)	510, 525, 985, 1498, 1588, 1785
KasI	GGCGCC	1 cut(s)	509
Kpn2I	TCCGGA	1 cut(s)	485
Kzo9I	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
LguI	GCTCTTC	1 cut(s)	440
LmnI	GCTCC	9 cut(s)	455, 488, 850, 949, 1187, 1225, 1331, 1782, 1876
Lsp1109I	GCAGC	4 cut(s)	167, 514, 811, 1330
LweI	GCATC	5 cut(s)	673, 1339, 1444, 1520, 1575
MaeI	CTAG	1 cut(s)	1478
MaeII	ACGT	6 cut(s)	305, 355, 495, 562, 1441, 1723
MaeIII	GTNAC	2 cut(s)	862, 1442
MalI	GATC	6 cut(s)	284, 288, 600, 1095, 1248, 1425
MboI	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
MfeI	CAATTG	2 cut(s)	954, 1263
MflI	RGATCY	1 cut(s)	1423
MhlI	GDGCHC	6 cut(s)	452, 1020, 1158, 1336, 1540, 1873
MluCI	AATT	9 cut(s)	256, 268, 358, 603, 891, 954, 1038, 1048, 1263
Mly113I	GGCGCC	1 cut(s)	510
MmeI	TCCRAC	2 cut(s)	212, 1699
MroI	TCCGGA	1 cut(s)	485
MseI	TTAA	7 cut(s)	267, 714, 1037, 1340, 1373, 1431, 1775
MslI	CAYNNNNRTG	2 cut(s)	765, 1077
MspA1I	CMGCKG	3 cut(s)	180, 1140, 1675
MspI	CCGG	6 cut(s)	453, 469, 486, 513, 596, 1158
MspR9I	CCNGG	4 cut(s)	627, 749, 1158, 1329
MunI	CAATTG	2 cut(s)	954, 1263
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	3 cut(s)	627, 749, 1329
MwoI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 969, 1596, 1791, 1877
NarI	GGCGCC	1 cut(s)	510
NciI	CCSGG	1 cut(s)	1158
NdeII	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
NlaIII	CATG	7 cut(s)	428, 944, 1082, 1247, 1306, 1599, 1759
NlaIV	GGNNCC	6 cut(s)	484, 511, 1333, 1537, 1624, 1872
NmuCI	GTSAC	2 cut(s)	862, 1442
NsbI	TGCGCA	1 cut(s)	1499
NspI	RCATGY	4 cut(s)	1082, 1306, 1599, 1759
PaeI	GCATGC	2 cut(s)	1306, 1599
PagI	TCATGA	1 cut(s)	1243
PaqCI	CACCTGC	1 cut(s)	1523
PciSI	GCTCTTC	1 cut(s)	440
PcsI	WCGNNNNNNNCGW	1 cut(s)	501
PctI	GAATGC	1 cut(s)	183
PfeI	GAWTC	3 cut(s)	421, 798, 1481
PflMI	CCANNNNNTGG	1 cut(s)	1328
PfoI	TCCNGGA	1 cut(s)	1327
PkrI	GCNGC	5 cut(s)	182, 529, 826, 989, 1320
Ple19I	CGATCG	1 cut(s)	285
PluTI	GGCGCC	1 cut(s)	513
Ppu21I	YACGTR	1 cut(s)	1442
PshBI	ATTAAT	3 cut(s)	267, 1037, 1775
Psp124BI	GAGCTC	1 cut(s)	452
Psp6I	CCWGG	3 cut(s)	625, 747, 1327
PspFI	CCCAGC	1 cut(s)	1855
PspGI	CCWGG	3 cut(s)	625, 747, 1327
PspN4I	GGNNCC	6 cut(s)	484, 511, 1333, 1537, 1624, 1872
PspPI	GGNCC	3 cut(s)	217, 1135, 1637
PsuI	RGATCY	1 cut(s)	1423
PvuI	CGATCG	1 cut(s)	285
PvuII	CAGCTG	1 cut(s)	180
RsaI	GTAC	5 cut(s)	843, 859, 908, 1129, 1170
RsaNI	GTAC	5 cut(s)	842, 858, 907, 1128, 1169
RseI	CAYNNNNRTG	2 cut(s)	765, 1077
SacI	GAGCTC	1 cut(s)	452
SapI	GCTCTTC	1 cut(s)	440
SaqAI	TTAA	7 cut(s)	267, 714, 1037, 1340, 1373, 1431, 1775
SatI	GCNGC	5 cut(s)	181, 528, 825, 988, 1319
Sau3AI	GATC	6 cut(s)	282, 286, 598, 1093, 1246, 1423
Sau96I	GGNCC	3 cut(s)	217, 1135, 1637
ScrFI	CCNGG	4 cut(s)	627, 749, 1158, 1329
SduI	GDGCHC	6 cut(s)	452, 1020, 1158, 1336, 1540, 1873
SfaNI	GCATC	5 cut(s)	673, 1339, 1444, 1520, 1575
SfoI	GGCGCC	1 cut(s)	511
SgrAI	CRCCGGYG	1 cut(s)	512
SinI	GGWCC	2 cut(s)	1135, 1637
SmiMI	CAYNNNNRTG	2 cut(s)	765, 1077
SphI	GCATGC	2 cut(s)	1306, 1599
Sse9I	AATT	9 cut(s)	256, 268, 358, 603, 891, 954, 1038, 1048, 1263
SsiI	CCGC	8 cut(s)	349, 375, 773, 988, 1138, 1316, 1673, 1706
SspDI	GGCGCC	1 cut(s)	509
SspI	AATATT	1 cut(s)	1800
SspMI	CTAG	1 cut(s)	1478
SstI	GAGCTC	1 cut(s)	452
StyD4I	CCNGG	4 cut(s)	625, 747, 1156, 1327
StyI	CCWWGG	3 cut(s)	544, 1527, 1615
TaaI	ACNGT	5 cut(s)	365, 738, 756, 862, 1393
TaiI	ACGT	6 cut(s)	308, 358, 498, 565, 1444, 1726
TaqI	TCGA	4 cut(s)	263, 285, 601, 681
TaqII	GACCGA	1 cut(s)	431
TasI	AATT	9 cut(s)	256, 268, 358, 603, 891, 954, 1038, 1048, 1263
TatI	WGTACW	3 cut(s)	841, 906, 1127
TauI	GCSGC	1 cut(s)	990
TfiI	GAWTC	3 cut(s)	421, 798, 1481
Tru1I	TTAA	7 cut(s)	267, 714, 1037, 1340, 1373, 1431, 1775
Tru9I	TTAA	7 cut(s)	267, 714, 1037, 1340, 1373, 1431, 1775
TscAI	CASTG	2 cut(s)	741, 1647
TseFI	GTSAC	2 cut(s)	862, 1442
TseI	GCWGC	4 cut(s)	180, 527, 824, 1318
Tsp45I	GTSAC	2 cut(s)	862, 1442
TspDTI	ATGAA	5 cut(s)	249, 790, 1232, 1243, 1452
TspGWI	ACGGA	3 cut(s)	110, 279, 474
TspRI	CASTG	2 cut(s)	741, 1647
Van91I	CCANNNNNTGG	1 cut(s)	1328
VpaK11BI	GGWCC	2 cut(s)	1135, 1637
VspI	ATTAAT	3 cut(s)	267, 1037, 1775
XagI	CCTNNNNNAGG	2 cut(s)	548, 1544
XceI	RCATGY	4 cut(s)	1082, 1306, 1599, 1759
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XspI	CTAG	1 cut(s)	1478
ZraI	GACGTC	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.