Prupe.6G230600_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
23363872 .. 23366574
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G230600.1

Sequence Viewer

Length: 978 bp
ATGGCTGTAGATTTTATGGGTTATAGGAACAGCAGCTTCTCTGCGAAATTGGAAGAGAACGCGGTGCAAGAAGCAGCTTCTGGGCTCGAGAGCGTTGAGAAGCTTATTAGACTCTTGTCTCAGGCTCAGCAGAACCAGCACCAAGATAAGTACCCTTCCATGGTTATGGACATGGATTGTAGAGCCGTCGCGGACGTCGCCGTTTCCAAGTTCAAGAAGGTCATTTCTCTTCTGGGTCGTACCCGGACCGGCCATGCCCGCTTCCGGCGAGCACCTTTGACTTTGACTTCTGGGTCTTCTTCTTCTCAAAACCAAGCCCAAACCCAAGAGACCTTCGTCAAGCAAGCTCCTTTAGAGTCCACCAAGGTTTACCATGCGACCCCGATCCAGCAGATCCCGCCTCCTCTGCATCATCACAGTACTGTGCTTGAGAGCACCAAGGACTCCTCCACCACAATAAATTTCTCCTATTCAGCTACGACGTCGTTTATGTCGTCGTTGACTGGAGACTCCGACAGCAAGCAGCCATTGTCGTCTTCGGCTTTTCAAATTACCAACATGTCCCAGGTGTCTTCAGTTGGAAAGCCACCGCTTTCGTCAGCTTCGTTGAAGAGGAAGTGCAGTTCTGATAATTTGGGCTCTGGCAAGTGCGGTGCTGGGTCCTCCGGCCGCTGCCATTGCTCTAAGAAGAGAAAGCTGAGATTGAAAAGGGTTGTGAGAGTTCCAGCTATAAGCTTAAAGATGGCTGATATTCCACCTGATGATTACTCTTGGAGAAAGTATGGACAGAAACCCATTAAGGGATCTCCACATCCAAGGGGATACTATAAGTGCAGCAGTGTCAGAGGGTGCCCAGCTCGAAAACATGTAGAGAGAGCTCTCGATGATCCAGCAATGCTTGTAGTGACCTATGAAGGCGAGCACAATCACTCTCTCTCAGTTGCAGAGACCTCCAATCTCATTCTAGAATCGTCTTAG

Protein Analysis

326

Amino Acids

35.53

Weight (kDa)

9.6

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011781)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 292
AatII GACGTC 2 cut(s) 198, 485
AccB1I GGYRCC 1 cut(s) 849
AccII CGCG 2 cut(s) 62, 191
AciI CCGC 7 cut(s) 62, 191, 259, 398, 590, 651, 670
AclWI GGATC 4 cut(s) 379, 388, 811, 881
AcoI YGGCCR 2 cut(s) 250, 667
AcsI RAATTY 1 cut(s) 460
AcuI CTGAAG 1 cut(s) 558
AcyI GRCGYC 2 cut(s) 195, 482
AfaI GTAC 3 cut(s) 152, 241, 421
AfiI CCNNNNNNNGG 3 cut(s) 160, 264, 800
AflIII ACRYGT 2 cut(s) 558, 865
AgsI TTSAA 4 cut(s) 214, 548, 610, 706
AjnI CCWGG 1 cut(s) 564
AloI GAACNNNNNNTCC 2 cut(s) 607, 639
Alw21I GWGCWC 4 cut(s) 274, 437, 880, 924
Alw26I GTCTC 4 cut(s) 123, 323, 501, 941
AlwI GGATC 4 cut(s) 379, 388, 811, 881
AlwNI CAGNNNCTG 1 cut(s) 80
Ama87I CYCGRG 1 cut(s) 86
AoxI GGCC 2 cut(s) 250, 667
ApeKI GCWGC 5 cut(s) 33, 74, 523, 672, 834
ApoI RAATTY 1 cut(s) 460
AspS9I GGNCC 2 cut(s) 246, 660
AsuC2I CCSGG 1 cut(s) 244
AvaI CYCGRG 1 cut(s) 86
AvaII GGWCC 2 cut(s) 246, 660
BaeGI GKGCMC 1 cut(s) 854
BanI GGYRCC 1 cut(s) 849
BanII GRGCYC 3 cut(s) 87, 641, 880
BbsI GAAGAC 3 cut(s) 288, 528, 564
Bbv12I GWGCWC 4 cut(s) 274, 437, 880, 924
BbvI GCAGC 5 cut(s) 45, 86, 535, 659, 846
BccI CCATC 1 cut(s) 736
BceAI ACGGC 2 cut(s) 170, 185
BciT130I CCWGG 1 cut(s) 566
BciVI GTATCC 1 cut(s) 815
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 4 cut(s) 123, 323, 501, 941
BfaI CTAG 1 cut(s) 965
BfmI CTRYAG 1 cut(s) 6
BfuI GTATCC 1 cut(s) 815
BisI GCNGC 6 cut(s) 34, 75, 524, 670, 673, 835
BlpI GCTNAGC 1 cut(s) 126
BlsI GCNGC 6 cut(s) 35, 76, 525, 671, 674, 836
BmcAI AGTACT 1 cut(s) 421
Bme1390I CCNGG 2 cut(s) 244, 566
Bme18I GGWCC 2 cut(s) 246, 660
BmeT110I CYCGRG 1 cut(s) 86
BmgT120I GGNCC 2 cut(s) 246, 660
BmiI GGNNCC 2 cut(s) 661, 851
BmrFI CCNGG 2 cut(s) 244, 566
BmsI GCATC 1 cut(s) 418
BoxI GACNNNNGTC 2 cut(s) 115, 335
BpiI GAAGAC 3 cut(s) 288, 528, 564
BpmI CTGGAG 1 cut(s) 525
Bpu1102I GCTNAGC 1 cut(s) 126
BpuEI CTTGAG 1 cut(s) 449
BpuMI CCSGG 1 cut(s) 244
BsaHI GRCGYC 2 cut(s) 195, 482
BsaI GGTCTC 2 cut(s) 323, 941
BsaJI CCNNGG 5 cut(s) 159, 363, 438, 564, 815
Bsc4I CCNNNNNNNGG 3 cut(s) 160, 264, 800
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 508
Bse3DI GCAATG 2 cut(s) 676, 900
BseBI CCWGG 1 cut(s) 566
BseDI CCNNGG 5 cut(s) 159, 363, 438, 564, 815
BseGI GGATG 1 cut(s) 811
BseLI CCNNNNNNNGG 3 cut(s) 160, 264, 800
BseMI GCAATG 2 cut(s) 676, 900
BseMII CTCAG 4 cut(s) 134, 140, 689, 951
BseNI ACTGG 1 cut(s) 508
BseRI GAGGAG 2 cut(s) 393, 436
BseSI GKGCMC 1 cut(s) 854
BseX3I CGGCCG 1 cut(s) 667
BseXI GCAGC 5 cut(s) 45, 86, 535, 659, 846
BseYI CCCAGC 2 cut(s) 656, 853
BsgI GTGCAG 2 cut(s) 640, 853
Bsh1236I CGCG 2 cut(s) 62, 191
Bsh1285I CGRYCG 1 cut(s) 670
BshFI GGCC 2 cut(s) 252, 669
BshNI GGYRCC 1 cut(s) 849
BsiEI CGRYCG 1 cut(s) 670
BsiHKAI GWGCWC 4 cut(s) 274, 437, 880, 924
BsiHKCI CYCGRG 1 cut(s) 86
BsiSI CCGG 4 cut(s) 244, 249, 265, 666
BslFI GGGAC 1 cut(s) 547
BslI CCNNNNNNNGG 3 cut(s) 160, 264, 800
BsmAI GTCTC 4 cut(s) 123, 323, 501, 941
BsmFI GGGAC 1 cut(s) 547
BsnI GGCC 2 cut(s) 252, 669
Bso31I GGTCTC 2 cut(s) 323, 941
BsoBI CYCGRG 1 cut(s) 86
Bsp1286I GDGCHC 7 cut(s) 87, 274, 437, 641, 854, 880, 924
Bsp143I GATC 4 cut(s) 384, 393, 803, 886
Bsp1720I GCTNAGC 1 cut(s) 126
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 7 cut(s) 62, 191, 259, 398, 590, 651, 670
BspANI GGCC 2 cut(s) 252, 669
BspCNI CTCAG 4 cut(s) 133, 139, 690, 950
BspFNI CGCG 2 cut(s) 62, 191
BspLI GGNNCC 2 cut(s) 661, 851
BspPI GGATC 4 cut(s) 379, 388, 811, 881
BspT107I GGYRCC 1 cut(s) 849
BspTNI GGTCTC 2 cut(s) 323, 941
BsrDI GCAATG 2 cut(s) 676, 900
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 1 cut(s) 508
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 5 cut(s) 159, 363, 438, 564, 815
BssMI GATC 4 cut(s) 384, 393, 803, 886
BssNI GRCGYC 2 cut(s) 195, 482
BssT1I CCWWGG 4 cut(s) 159, 363, 438, 815
Bst2UI CCWGG 1 cut(s) 566
Bst4CI ACNGT 2 cut(s) 419, 424
Bst6I CTCTTC 4 cut(s) 48, 234, 605, 683
BstACI GRCGYC 2 cut(s) 195, 482
BstC8I GCNNGC 5 cut(s) 259, 270, 345, 521, 920
BstDEI CTNAG 6 cut(s) 120, 126, 684, 698, 937, 975
BstDSI CCRYGG 1 cut(s) 159
BstF5I GGATG 1 cut(s) 811
BstFNI CGCG 2 cut(s) 62, 191
BstKTI GATC 4 cut(s) 387, 396, 806, 889
BstMAI GTCTC 4 cut(s) 123, 323, 501, 941
BstMBI GATC 4 cut(s) 384, 393, 803, 886
BstMCI CGRYCG 1 cut(s) 670
BstMWI GCNNNNNNNGC 6 cut(s) 136, 197, 258, 397, 406, 678
BstNI CCWGG 1 cut(s) 566
BstNSI RCATGY 2 cut(s) 562, 869
BstPAI GACNNNNGTC 2 cut(s) 115, 335
BstSCI CCNGG 2 cut(s) 242, 564
BstSFI CTRYAG 1 cut(s) 6
BstSLI GKGCMC 1 cut(s) 854
BstUI CGCG 2 cut(s) 62, 191
BstV1I GCAGC 5 cut(s) 45, 86, 535, 659, 846
BstV2I GAAGAC 3 cut(s) 288, 528, 564
BstX2I RGATCY 2 cut(s) 393, 803
BstXI CCANNNNNNTGG 1 cut(s) 166
BstYI RGATCY 2 cut(s) 393, 803
BstZI CGGCCG 1 cut(s) 667
BsuI GTATCC 1 cut(s) 815
BsuRI GGCC 2 cut(s) 252, 669
BtgI CCRYGG 1 cut(s) 159
BtsCI GGATG 1 cut(s) 811
BtsI GCAGTG 1 cut(s) 844
BtsIMutI CAGTG 1 cut(s) 844
Cac8I GCNNGC 5 cut(s) 259, 270, 345, 521, 920
CaiI CAGNNNCTG 1 cut(s) 80
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 2 cut(s) 246, 660
CpoI CGGWCCG 1 cut(s) 246
Csp6I GTAC 3 cut(s) 151, 240, 420
CspI CGGWCCG 1 cut(s) 246
CviAII CATG 6 cut(s) 160, 172, 254, 374, 559, 866
CviQI GTAC 3 cut(s) 151, 240, 420
DdeI CTNAG 6 cut(s) 120, 126, 684, 698, 937, 975
DpnI GATC 4 cut(s) 386, 395, 805, 888
DpnII GATC 4 cut(s) 384, 393, 803, 886
DrdI GACNNNNNNGTC 1 cut(s) 292
DseDI GACNNNNNNGTC 1 cut(s) 292
EaeI YGGCCR 2 cut(s) 250, 667
EagI CGGCCG 1 cut(s) 667
Eam1104I CTCTTC 4 cut(s) 48, 234, 605, 683
EarI CTCTTC 4 cut(s) 48, 234, 605, 683
Ecl136II GAGCTC 1 cut(s) 878
EclXI CGGCCG 1 cut(s) 667
Eco130I CCWWGG 4 cut(s) 159, 363, 438, 815
Eco24I GRGCYC 3 cut(s) 87, 641, 880
Eco31I GGTCTC 2 cut(s) 323, 941
Eco47I GGWCC 2 cut(s) 246, 660
Eco52I CGGCCG 1 cut(s) 667
Eco53kI GAGCTC 1 cut(s) 878
Eco57I CTGAAG 1 cut(s) 558
Eco88I CYCGRG 1 cut(s) 86
EcoICRI GAGCTC 1 cut(s) 878
EcoO109I RGGNCCY 1 cut(s) 660
EcoRII CCWGG 1 cut(s) 564
EcoT14I CCWWGG 4 cut(s) 159, 363, 438, 815
EcoT38I GRGCYC 3 cut(s) 87, 641, 880
ErhI CCWWGG 4 cut(s) 159, 363, 438, 815
FaeI CATG 6 cut(s) 163, 175, 257, 377, 562, 869
FaqI GGGAC 1 cut(s) 547
FatI CATG 6 cut(s) 159, 171, 253, 373, 558, 865
FauI CCCGC 2 cut(s) 266, 405
Fnu4HI GCNGC 6 cut(s) 34, 75, 524, 670, 673, 835
FokI GGATG 1 cut(s) 798
FriOI GRGCYC 3 cut(s) 87, 641, 880
Fsp4HI GCNGC 6 cut(s) 34, 75, 524, 670, 673, 835
FspBI CTAG 1 cut(s) 965
GluI GCNGC 6 cut(s) 34, 75, 524, 670, 673, 835
GsaI CCCAGC 2 cut(s) 660, 857
GsuI CTGGAG 1 cut(s) 525
HaeIII GGCC 2 cut(s) 252, 669
HapII CCGG 4 cut(s) 244, 249, 265, 666
Hin1I GRCGYC 2 cut(s) 195, 482
Hin1II CATG 6 cut(s) 163, 175, 257, 377, 562, 869
HincII GTYRAC 1 cut(s) 501
HindII GTYRAC 1 cut(s) 501
HindIII AAGCTT 2 cut(s) 101, 733
HinfI GANTC 5 cut(s) 111, 356, 443, 509, 968
HpaII CCGG 4 cut(s) 244, 249, 265, 666
Hpy166II GTNNAC 3 cut(s) 360, 370, 501
Hpy188I TCNGA 3 cut(s) 514, 628, 845
Hpy188III TCNNGA 4 cut(s) 88, 214, 881, 965
Hpy8I GTNNAC 3 cut(s) 360, 370, 501
Hpy99I CGWCG 5 cut(s) 191, 200, 484, 487, 499
HpyAV CCTTC 4 cut(s) 165, 211, 343, 908
HpyCH4III ACNGT 2 cut(s) 419, 424
HpyCH4IV ACGT 2 cut(s) 195, 482
HpyCH4V TGCA 5 cut(s) 67, 409, 621, 834, 944
HpyF10VI GCNNNNNNNGC 6 cut(s) 136, 197, 258, 397, 406, 678
HpyF3I CTNAG 6 cut(s) 120, 126, 684, 698, 937, 975
HpySE526I ACGT 2 cut(s) 195, 482
Hsp92I GRCGYC 2 cut(s) 195, 482
Hsp92II CATG 6 cut(s) 163, 175, 257, 377, 562, 869
Kzo9I GATC 4 cut(s) 384, 393, 803, 886
LmnI GCTCC 1 cut(s) 352
Lsp1109I GCAGC 5 cut(s) 45, 86, 535, 659, 846
LweI GCATC 1 cut(s) 418
MaeI CTAG 1 cut(s) 965
MaeII ACGT 2 cut(s) 195, 482
MaeIII GTNAC 1 cut(s) 904
MalI GATC 4 cut(s) 386, 395, 805, 888
MboI GATC 4 cut(s) 384, 393, 803, 886
MboII GAAGA 9 cut(s) 65, 221, 288, 291, 294, 528, 564, 622, 700
MflI RGATCY 2 cut(s) 393, 803
MhlI GDGCHC 7 cut(s) 87, 274, 437, 641, 854, 880, 924
MluCI AATT 4 cut(s) 47, 460, 549, 631
MlyI GAGTC 4 cut(s) 105, 365, 437, 503
MmeI TCCRAC 2 cut(s) 537, 559
MnlI CCTC 7 cut(s) 411, 414, 457, 606, 673, 839, 961
MseI TTAA 2 cut(s) 737, 798
MslI CAYNNNNRTG 1 cut(s) 164
MspA1I CMGCKG 1 cut(s) 672
MspI CCGG 4 cut(s) 244, 249, 265, 666
MspR9I CCNGG 2 cut(s) 244, 566
MvaI CCWGG 1 cut(s) 566
MvnI CGCG 2 cut(s) 62, 191
MwoI GCNNNNNNNGC 6 cut(s) 136, 197, 258, 397, 406, 678
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 1 cut(s) 159
NdeII GATC 4 cut(s) 384, 393, 803, 886
NlaIII CATG 6 cut(s) 163, 175, 257, 377, 562, 869
NlaIV GGNNCC 2 cut(s) 661, 851
NmuCI GTSAC 1 cut(s) 904
NspI RCATGY 2 cut(s) 562, 869
PaeR7I CTCGAG 1 cut(s) 86
PciI ACATGT 2 cut(s) 558, 865
PcsI WCGNNNNNNNCGW 2 cut(s) 491, 602
PfeI GAWTC 1 cut(s) 968
PkrI GCNGC 6 cut(s) 35, 76, 525, 671, 674, 836
PleI GAGTC 4 cut(s) 105, 364, 437, 503
PpsI GAGTC 4 cut(s) 105, 364, 437, 503
PpuMI RGGWCCY 1 cut(s) 660
PscI ACATGT 2 cut(s) 558, 865
PshAI GACNNNNGTC 2 cut(s) 115, 335
Psp124BI GAGCTC 1 cut(s) 880
Psp5II RGGWCCY 1 cut(s) 660
Psp6I CCWGG 1 cut(s) 564
PspFI CCCAGC 2 cut(s) 656, 853
PspGI CCWGG 1 cut(s) 564
PspN4I GGNNCC 2 cut(s) 661, 851
PspPI GGNCC 2 cut(s) 246, 660
PspPPI RGGWCCY 1 cut(s) 660
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 2 cut(s) 393, 803
RsaI GTAC 3 cut(s) 152, 241, 421
RsaNI GTAC 3 cut(s) 151, 240, 420
RseI CAYNNNNRTG 1 cut(s) 164
Rsr2I CGGWCCG 1 cut(s) 246
RsrII CGGWCCG 1 cut(s) 246
SacI GAGCTC 1 cut(s) 880
SaqAI TTAA 2 cut(s) 737, 798
SatI GCNGC 6 cut(s) 34, 75, 524, 670, 673, 835
Sau3AI GATC 4 cut(s) 384, 393, 803, 886
Sau96I GGNCC 2 cut(s) 246, 660
ScaI AGTACT 1 cut(s) 421
SchI GAGTC 4 cut(s) 105, 365, 437, 503
ScrFI CCNGG 2 cut(s) 244, 566
SduI GDGCHC 7 cut(s) 87, 274, 437, 641, 854, 880, 924
SfaNI GCATC 1 cut(s) 418
SfcI CTRYAG 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 86
SinI GGWCC 2 cut(s) 246, 660
SlaI CTCGAG 1 cut(s) 86
SmiMI CAYNNNNRTG 1 cut(s) 164
SmlI CTYRAG 2 cut(s) 86, 428
SmoI CTYRAG 2 cut(s) 86, 428
Sse9I AATT 4 cut(s) 47, 460, 549, 631
SsiI CCGC 7 cut(s) 62, 191, 259, 398, 590, 651, 670
SspMI CTAG 1 cut(s) 965
SstI GAGCTC 1 cut(s) 880
StyD4I CCNGG 2 cut(s) 242, 564
StyI CCWWGG 4 cut(s) 159, 363, 438, 815
TaaI ACNGT 2 cut(s) 419, 424
TaiI ACGT 2 cut(s) 198, 485
TaqI TCGA 3 cut(s) 87, 859, 882
TasI AATT 4 cut(s) 47, 460, 549, 631
TatI WGTACW 1 cut(s) 419
TauI GCSGC 1 cut(s) 672
TfiI GAWTC 1 cut(s) 968
Tru1I TTAA 2 cut(s) 737, 798
Tru9I TTAA 2 cut(s) 737, 798
TscAI CASTG 1 cut(s) 844
TseFI GTSAC 1 cut(s) 904
TseI GCWGC 5 cut(s) 33, 74, 523, 672, 834
Tsp45I GTSAC 1 cut(s) 904
TspDTI ATGAA 1 cut(s) 927
TspRI CASTG 1 cut(s) 844
VpaK11BI GGWCC 2 cut(s) 246, 660
XapI RAATTY 1 cut(s) 460
XbaI TCTAGA 1 cut(s) 964
XceI RCATGY 2 cut(s) 562, 869
XhoI CTCGAG 1 cut(s) 86
XspI CTAG 1 cut(s) 965
ZraI GACGTC 2 cut(s) 196, 483
ZrmI AGTACT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.