WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23320 AT2G23320 |
| fragaria_vesca | FvH4_1g16480 FvH4_1g16480 |
| malus_domestica | MD02G1177500.v1.1 MD15G1287300.v1.1 |
| prunus_persica | Prupe.6G230600_v2.0.a1 |
| pyrus_communis | pycom02g14340 pycom15g25080 |
| rosa_chinensis | RchiOBHm_Chr2g0106361 |
| rosa_laevigata | RLG00000017492 |
| rosa_multiflora | Rmu_sc0016473.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00137250 |
| rosa_rugosa | Rorug02G0135000 |
| rosa_samantha | Rh2AG186100 Rh2BG196300 Rh2CG191100 Rh2DG192200 |
| rosa_wichuraiana | Rw2G014510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 180 |
| AccB1I | GGYRCC | 1 cut(s) | 816 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 148 |
| AccI | GTMKAC | 2 cut(s) | 311, 321 |
| AccII | CGCG | 1 cut(s) | 509 |
| AccIII | TCCGGA | 1 cut(s) | 246 |
| AciI | CCGC | 7 cut(s) | 72, 165, 241, 381, 507, 554, 580 |
| AclWI | GGATC | 3 cut(s) | 331, 340, 848 |
| AcoI | YGGCCR | 4 cut(s) | 3, 36, 232, 543 |
| AcsI | RAATTY | 2 cut(s) | 28, 418 |
| AcuI | CTGAAG | 1 cut(s) | 596 |
| AcyI | GRCGYC | 2 cut(s) | 177, 332 |
| AfaI | GTAC | 3 cut(s) | 140, 431, 749 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 148, 246, 355, 579, 767 |
| AflIII | ACRYGT | 1 cut(s) | 832 |
| AgsI | TTSAA | 4 cut(s) | 47, 196, 515, 673 |
| AjnI | CCWGG | 2 cut(s) | 63, 531 |
| AluBI | AGCT | 7 cut(s) | 43, 100, 591, 627, 664, 702, 845 |
| AluI | AGCT | 7 cut(s) | 43, 100, 591, 627, 664, 702, 845 |
| Alw21I | GWGCWC | 1 cut(s) | 891 |
| Alw26I | GTCTC | 1 cut(s) | 541 |
| AlwI | GGATC | 3 cut(s) | 331, 340, 848 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| Aor13HI | TCCGGA | 1 cut(s) | 246 |
| AoxI | GGCC | 6 cut(s) | 3, 36, 79, 217, 232, 543 |
| ApeKI | GCWGC | 5 cut(s) | 378, 440, 490, 588, 639 |
| ApoI | RAATTY | 2 cut(s) | 28, 418 |
| AspLEI | GCGC | 1 cut(s) | 355 |
| AspS9I | GGNCC | 3 cut(s) | 217, 222, 228 |
| AsuC2I | CCSGG | 2 cut(s) | 226, 821 |
| AsuII | TTCGAA | 1 cut(s) | 920 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| AvaII | GGWCC | 2 cut(s) | 222, 228 |
| BaeGI | GKGCMC | 1 cut(s) | 821 |
| BanI | GGYRCC | 1 cut(s) | 816 |
| BanII | GRGCYC | 2 cut(s) | 256, 608 |
| BbsI | GAAGAC | 1 cut(s) | 495 |
| Bbv12I | GWGCWC | 1 cut(s) | 891 |
| BbvI | GCAGC | 5 cut(s) | 390, 427, 502, 600, 626 |
| BccI | CCATC | 3 cut(s) | 703, 770, 865 |
| BceAI | ACGGC | 4 cut(s) | 41, 152, 167, 391 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 151, 185, 900, 934 |
| BciT130I | CCWGG | 2 cut(s) | 65, 533 |
| BciVI | GTATCC | 1 cut(s) | 782 |
| BcnI | CCSGG | 2 cut(s) | 226, 821 |
| BcoDI | GTCTC | 1 cut(s) | 541 |
| BfaI | CTAG | 3 cut(s) | 315, 866, 932 |
| BfuI | GTATCC | 1 cut(s) | 782 |
| BisI | GCNGC | 7 cut(s) | 72, 379, 441, 491, 554, 589, 640 |
| BlsI | GCNGC | 7 cut(s) | 73, 380, 442, 492, 555, 590, 641 |
| Bme1390I | CCNGG | 4 cut(s) | 65, 226, 533, 821 |
| Bme18I | GGWCC | 2 cut(s) | 222, 228 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 3 cut(s) | 217, 222, 228 |
| BmiI | GGNNCC | 3 cut(s) | 224, 607, 818 |
| BmrFI | CCNGG | 4 cut(s) | 65, 226, 533, 821 |
| BmrI | ACTGGG | 1 cut(s) | 480 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BmuI | ACTGGG | 1 cut(s) | 480 |
| BoxI | GACNNNNGTC | 1 cut(s) | 317 |
| BpiI | GAAGAC | 1 cut(s) | 495 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 241, 273 |
| Bpu14I | TTCGAA | 1 cut(s) | 920 |
| BpuMI | CCSGG | 2 cut(s) | 226, 821 |
| BsaHI | GRCGYC | 2 cut(s) | 177, 332 |
| BsaI | GGTCTC | 1 cut(s) | 541 |
| BsaJI | CCNNGG | 6 cut(s) | 6, 147, 373, 531, 600, 782 |
| BsaWI | WCCGGW | 2 cut(s) | 246, 724 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 259, 289 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 148, 246, 355, 579, 767 |
| Bse118I | RCCGGY | 2 cut(s) | 230, 355 |
| Bse1I | ACTGG | 1 cut(s) | 475 |
| Bse3DI | GCAATG | 1 cut(s) | 643 |
| BseAI | TCCGGA | 1 cut(s) | 246 |
| BseBI | CCWGG | 2 cut(s) | 65, 533 |
| BseDI | CCNNGG | 6 cut(s) | 6, 147, 373, 531, 600, 782 |
| BseGI | GGATG | 4 cut(s) | 74, 733, 778, 856 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 148, 246, 355, 579, 767 |
| BseMI | GCAATG | 1 cut(s) | 643 |
| BseMII | CTCAG | 1 cut(s) | 656 |
| BseNI | ACTGG | 1 cut(s) | 475 |
| BseRI | GAGGAG | 2 cut(s) | 264, 619 |
| BseSI | GKGCMC | 1 cut(s) | 821 |
| BseX3I | CGGCCG | 1 cut(s) | 543 |
| BseXI | GCAGC | 5 cut(s) | 390, 427, 502, 600, 626 |
| BseYI | CCCAGC | 1 cut(s) | 120 |
| BsgI | GTGCAG | 2 cut(s) | 145, 607 |
| Bsh1236I | CGCG | 1 cut(s) | 509 |
| Bsh1285I | CGRYCG | 1 cut(s) | 546 |
| BshFI | GGCC | 6 cut(s) | 5, 38, 81, 219, 234, 545 |
| BshNI | GGYRCC | 1 cut(s) | 816 |
| BsiEI | CGRYCG | 1 cut(s) | 546 |
| BsiHKAI | GWGCWC | 1 cut(s) | 891 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BslFI | GGGAC | 3 cut(s) | 406, 488, 514 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 148, 246, 355, 579, 767 |
| BsmAI | GTCTC | 1 cut(s) | 541 |
| BsmFI | GGGAC | 3 cut(s) | 406, 488, 514 |
| BsnI | GGCC | 6 cut(s) | 5, 38, 81, 219, 234, 545 |
| Bso31I | GGTCTC | 1 cut(s) | 541 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp119I | TTCGAA | 1 cut(s) | 920 |
| Bsp1286I | GDGCHC | 4 cut(s) | 256, 608, 821, 891 |
| Bsp13I | TCCGGA | 1 cut(s) | 246 |
| Bsp143I | GATC | 3 cut(s) | 336, 345, 853 |
| Bsp19I | CCATGG | 1 cut(s) | 147 |
| BspACI | CCGC | 7 cut(s) | 72, 165, 241, 381, 507, 554, 580 |
| BspANI | GGCC | 6 cut(s) | 5, 38, 81, 219, 234, 545 |
| BspCNI | CTCAG | 1 cut(s) | 657 |
| BspEI | TCCGGA | 1 cut(s) | 246 |
| BspFNI | CGCG | 1 cut(s) | 509 |
| BspLI | GGNNCC | 3 cut(s) | 224, 607, 818 |
| BspPI | GGATC | 3 cut(s) | 331, 340, 848 |
| BspT104I | TTCGAA | 1 cut(s) | 920 |
| BspT107I | GGYRCC | 1 cut(s) | 816 |
| BspTNI | GGTCTC | 1 cut(s) | 541 |
| BsrDI | GCAATG | 1 cut(s) | 643 |
| BsrFI | RCCGGY | 2 cut(s) | 230, 355 |
| BsrI | ACTGG | 1 cut(s) | 475 |
| BssAI | RCCGGY | 2 cut(s) | 230, 355 |
| BssECI | CCNNGG | 6 cut(s) | 6, 147, 373, 531, 600, 782 |
| BssMI | GATC | 3 cut(s) | 336, 345, 853 |
| BssNI | GRCGYC | 2 cut(s) | 177, 332 |
| BssT1I | CCWWGG | 3 cut(s) | 147, 600, 782 |
| Bst2UI | CCWGG | 2 cut(s) | 65, 533 |
| Bst6I | CTCTTC | 4 cut(s) | 216, 439, 544, 668 |
| BstACI | GRCGYC | 2 cut(s) | 177, 332 |
| BstBI | TTCGAA | 1 cut(s) | 920 |
| BstC8I | GCNNGC | 3 cut(s) | 241, 488, 625 |
| BstDEI | CTNAG | 1 cut(s) | 665 |
| BstDSI | CCRYGG | 3 cut(s) | 6, 147, 373 |
| BstF5I | GGATG | 4 cut(s) | 74, 733, 778, 856 |
| BstFNI | CGCG | 1 cut(s) | 509 |
| BstHHI | GCGC | 1 cut(s) | 355 |
| BstKTI | GATC | 3 cut(s) | 339, 348, 856 |
| BstMAI | GTCTC | 1 cut(s) | 541 |
| BstMBI | GATC | 3 cut(s) | 336, 345, 853 |
| BstMCI | CGRYCG | 1 cut(s) | 546 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 87, 179, 240, 340, 645 |
| BstNI | CCWGG | 2 cut(s) | 65, 533 |
| BstNSI | RCATGY | 1 cut(s) | 836 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 317 |
| BstSCI | CCNGG | 4 cut(s) | 63, 224, 531, 819 |
| BstSLI | GKGCMC | 1 cut(s) | 821 |
| BstUI | CGCG | 1 cut(s) | 509 |
| BstV1I | GCAGC | 5 cut(s) | 390, 427, 502, 600, 626 |
| BstV2I | GAAGAC | 1 cut(s) | 495 |
| BstX2I | RGATCY | 1 cut(s) | 345 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 154 |
| BstYI | RGATCY | 1 cut(s) | 345 |
| BstZI | CGGCCG | 1 cut(s) | 543 |
| BsuI | GTATCC | 1 cut(s) | 782 |
| BsuRI | GGCC | 6 cut(s) | 5, 38, 81, 219, 234, 545 |
| BtgI | CCRYGG | 3 cut(s) | 6, 147, 373 |
| BtsCI | GGATG | 4 cut(s) | 74, 733, 778, 856 |
| BtsI | GCAGTG | 2 cut(s) | 267, 811 |
| BtsIMutI | CAGTG | 2 cut(s) | 267, 811 |
| Cac8I | GCNNGC | 3 cut(s) | 241, 488, 625 |
| CfoI | GCGC | 1 cut(s) | 355 |
| Cfr10I | RCCGGY | 2 cut(s) | 230, 355 |
| Cfr13I | GGNCC | 3 cut(s) | 217, 222, 228 |
| CpoI | CGGWCCG | 1 cut(s) | 228 |
| CseI | GACGC | 2 cut(s) | 79, 340 |
| Csp6I | GTAC | 3 cut(s) | 139, 430, 748 |
| CspI | CGGWCCG | 1 cut(s) | 228 |
| CviAII | CATG | 6 cut(s) | 16, 148, 154, 326, 496, 833 |
| CviQI | GTAC | 3 cut(s) | 139, 430, 748 |
| DdeI | CTNAG | 1 cut(s) | 665 |
| DpnI | GATC | 3 cut(s) | 338, 347, 855 |
| DpnII | GATC | 3 cut(s) | 336, 345, 853 |
| EaeI | YGGCCR | 4 cut(s) | 3, 36, 232, 543 |
| EagI | CGGCCG | 1 cut(s) | 543 |
| Eam1104I | CTCTTC | 4 cut(s) | 216, 439, 544, 668 |
| EarI | CTCTTC | 4 cut(s) | 216, 439, 544, 668 |
| EclXI | CGGCCG | 1 cut(s) | 543 |
| Eco130I | CCWWGG | 3 cut(s) | 147, 600, 782 |
| Eco24I | GRGCYC | 2 cut(s) | 256, 608 |
| Eco31I | GGTCTC | 1 cut(s) | 541 |
| Eco47I | GGWCC | 2 cut(s) | 222, 228 |
| Eco52I | CGGCCG | 1 cut(s) | 543 |
| Eco57I | CTGAAG | 1 cut(s) | 596 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoRII | CCWGG | 2 cut(s) | 63, 531 |
| EcoT14I | CCWWGG | 3 cut(s) | 147, 600, 782 |
| EcoT38I | GRGCYC | 2 cut(s) | 256, 608 |
| ErhI | CCWWGG | 3 cut(s) | 147, 600, 782 |
| FaeI | CATG | 6 cut(s) | 19, 151, 157, 329, 499, 836 |
| FaqI | GGGAC | 3 cut(s) | 406, 488, 514 |
| FatI | CATG | 6 cut(s) | 15, 147, 153, 325, 495, 832 |
| FauI | CCCGC | 1 cut(s) | 248 |
| FblI | GTMKAC | 2 cut(s) | 311, 321 |
| Fnu4HI | GCNGC | 7 cut(s) | 72, 379, 441, 491, 554, 589, 640 |
| FokI | GGATG | 4 cut(s) | 61, 740, 765, 863 |
| FriOI | GRGCYC | 2 cut(s) | 256, 608 |
| Fsp4HI | GCNGC | 7 cut(s) | 72, 379, 441, 491, 554, 589, 640 |
| FspBI | CTAG | 3 cut(s) | 315, 866, 932 |
| GlaI | GCGC | 1 cut(s) | 354 |
| GluI | GCNGC | 7 cut(s) | 72, 379, 441, 491, 554, 589, 640 |
| GsaI | CCCAGC | 1 cut(s) | 124 |
| HaeIII | GGCC | 6 cut(s) | 5, 38, 81, 219, 234, 545 |
| HgaI | GACGC | 2 cut(s) | 79, 340 |
| HhaI | GCGC | 1 cut(s) | 355 |
| Hin1I | GRCGYC | 2 cut(s) | 177, 332 |
| Hin1II | CATG | 6 cut(s) | 19, 151, 157, 329, 499, 836 |
| Hin6I | GCGC | 1 cut(s) | 353 |
| HinP1I | GCGC | 1 cut(s) | 353 |
| HincII | GTYRAC | 2 cut(s) | 312, 468 |
| HindII | GTYRAC | 2 cut(s) | 312, 468 |
| HindIII | AAGCTT | 2 cut(s) | 41, 700 |
| HinfI | GANTC | 6 cut(s) | 284, 302, 401, 476, 922, 935 |
| Hpy166II | GTNNAC | 5 cut(s) | 312, 322, 408, 468, 830 |
| Hpy188I | TCNGA | 3 cut(s) | 107, 481, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 85, 94, 196, 247 |
| Hpy8I | GTNNAC | 5 cut(s) | 312, 322, 408, 468, 830 |
| Hpy99I | CGWCG | 9 cut(s) | 62, 95, 173, 179, 182, 313, 334, 448, 466 |
| HpyAV | CCTTC | 1 cut(s) | 274 |
| HpyCH4IV | ACGT | 1 cut(s) | 177 |
| HpyCH4V | TGCA | 5 cut(s) | 162, 367, 588, 623, 911 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 87, 179, 240, 340, 645 |
| HpyF3I | CTNAG | 1 cut(s) | 665 |
| HpySE526I | ACGT | 1 cut(s) | 177 |
| Hsp92I | GRCGYC | 2 cut(s) | 177, 332 |
| Hsp92II | CATG | 6 cut(s) | 19, 151, 157, 329, 499, 836 |
| HspAI | GCGC | 1 cut(s) | 353 |
| Kpn2I | TCCGGA | 1 cut(s) | 246 |
| Kzo9I | GATC | 3 cut(s) | 336, 345, 853 |
| LmnI | GCTCC | 4 cut(s) | 277, 596, 611, 632 |
| Lsp1109I | GCAGC | 5 cut(s) | 390, 427, 502, 600, 626 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 3 cut(s) | 315, 866, 932 |
| MaeII | ACGT | 1 cut(s) | 177 |
| MaeIII | GTNAC | 1 cut(s) | 871 |
| MalI | GATC | 3 cut(s) | 338, 347, 855 |
| MboI | GATC | 3 cut(s) | 336, 345, 853 |
| MboII | GAAGA | 8 cut(s) | 59, 203, 297, 426, 495, 531, 555, 685 |
| MflI | RGATCY | 1 cut(s) | 345 |
| MhlI | GDGCHC | 4 cut(s) | 256, 608, 821, 891 |
| MluCI | AATT | 3 cut(s) | 28, 418, 516 |
| MlyI | GAGTC | 3 cut(s) | 293, 395, 470 |
| MmeI | TCCRAC | 1 cut(s) | 618 |
| MroI | TCCGGA | 1 cut(s) | 246 |
| MseI | TTAA | 1 cut(s) | 704 |
| MslI | CAYNNNNRTG | 1 cut(s) | 152 |
| MspA1I | CMGCKG | 1 cut(s) | 381 |
| MspR9I | CCNGG | 4 cut(s) | 65, 226, 533, 821 |
| MvaI | CCWGG | 2 cut(s) | 65, 533 |
| MvnI | CGCG | 1 cut(s) | 509 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 87, 179, 240, 340, 645 |
| NciI | CCSGG | 2 cut(s) | 226, 821 |
| NcoI | CCATGG | 1 cut(s) | 147 |
| NdeII | GATC | 3 cut(s) | 336, 345, 853 |
| NlaIII | CATG | 6 cut(s) | 19, 151, 157, 329, 499, 836 |
| NlaIV | GGNNCC | 3 cut(s) | 224, 607, 818 |
| NmeAIII | GCCGAG | 1 cut(s) | 14 |
| NmuCI | GTSAC | 1 cut(s) | 871 |
| NspI | RCATGY | 1 cut(s) | 836 |
| NspV | TTCGAA | 1 cut(s) | 920 |
| PaeR7I | CTCGAG | 1 cut(s) | 83 |
| PciI | ACATGT | 1 cut(s) | 832 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 90, 458, 506 |
| PfeI | GAWTC | 3 cut(s) | 302, 922, 935 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 148 |
| PfoI | TCCNGGA | 1 cut(s) | 63 |
| PkrI | GCNGC | 7 cut(s) | 73, 380, 442, 492, 555, 590, 641 |
| PleI | GAGTC | 3 cut(s) | 292, 395, 470 |
| PpsI | GAGTC | 3 cut(s) | 292, 395, 470 |
| PscI | ACATGT | 1 cut(s) | 832 |
| PshAI | GACNNNNGTC | 1 cut(s) | 317 |
| Psp6I | CCWGG | 2 cut(s) | 63, 531 |
| PspFI | CCCAGC | 1 cut(s) | 120 |
| PspGI | CCWGG | 2 cut(s) | 63, 531 |
| PspN4I | GGNNCC | 3 cut(s) | 224, 607, 818 |
| PspPI | GGNCC | 3 cut(s) | 217, 222, 228 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 672, 704 |
| PsuI | RGATCY | 1 cut(s) | 345 |
| RsaI | GTAC | 3 cut(s) | 140, 431, 749 |
| RsaNI | GTAC | 3 cut(s) | 139, 430, 748 |
| RseI | CAYNNNNRTG | 1 cut(s) | 152 |
| Rsr2I | CGGWCCG | 1 cut(s) | 228 |
| RsrII | CGGWCCG | 1 cut(s) | 228 |
| SalI | GTCGAC | 1 cut(s) | 310 |
| SaqAI | TTAA | 1 cut(s) | 704 |
| SatI | GCNGC | 7 cut(s) | 72, 379, 441, 491, 554, 589, 640 |
| Sau3AI | GATC | 3 cut(s) | 336, 345, 853 |
| Sau96I | GGNCC | 3 cut(s) | 217, 222, 228 |
| SchI | GAGTC | 3 cut(s) | 293, 395, 470 |
| ScrFI | CCNGG | 4 cut(s) | 65, 226, 533, 821 |
| SduI | GDGCHC | 4 cut(s) | 256, 608, 821, 891 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| Sfr274I | CTCGAG | 1 cut(s) | 83 |
| SfuI | TTCGAA | 1 cut(s) | 920 |
| SgrAI | CRCCGGYG | 1 cut(s) | 355 |
| SinI | GGWCC | 2 cut(s) | 222, 228 |
| SlaI | CTCGAG | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 152 |
| SmlI | CTYRAG | 1 cut(s) | 83 |
| SmoI | CTYRAG | 1 cut(s) | 83 |
| Sse9I | AATT | 3 cut(s) | 28, 418, 516 |
| SsiI | CCGC | 7 cut(s) | 72, 165, 241, 381, 507, 554, 580 |
| SspI | AATATT | 1 cut(s) | 907 |
| SspMI | CTAG | 3 cut(s) | 315, 866, 932 |
| StyD4I | CCNGG | 4 cut(s) | 63, 224, 531, 819 |
| StyI | CCWWGG | 3 cut(s) | 147, 600, 782 |
| TaiI | ACGT | 1 cut(s) | 180 |
| TaqI | TCGA | 5 cut(s) | 84, 93, 311, 920, 938 |
| TasI | AATT | 3 cut(s) | 28, 418, 516 |
| TauI | GCSGC | 2 cut(s) | 74, 556 |
| TfiI | GAWTC | 3 cut(s) | 302, 922, 935 |
| Tru1I | TTAA | 1 cut(s) | 704 |
| Tru9I | TTAA | 1 cut(s) | 704 |
| TscAI | CASTG | 2 cut(s) | 274, 811 |
| TseFI | GTSAC | 1 cut(s) | 871 |
| TseI | GCWGC | 5 cut(s) | 378, 440, 490, 588, 639 |
| Tsp45I | GTSAC | 1 cut(s) | 871 |
| TspDTI | ATGAA | 2 cut(s) | 4, 894 |
| TspGWI | ACGGA | 2 cut(s) | 277, 765 |
| TspRI | CASTG | 2 cut(s) | 274, 811 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 148 |
| VpaK11BI | GGWCC | 2 cut(s) | 222, 228 |
| XapI | RAATTY | 2 cut(s) | 28, 418 |
| XceI | RCATGY | 1 cut(s) | 836 |
| XhoI | CTCGAG | 1 cut(s) | 83 |
| XmiI | GTMKAC | 2 cut(s) | 311, 321 |
| XspI | CTAG | 3 cut(s) | 315, 866, 932 |
| ZraI | GACGTC | 1 cut(s) | 178 |