WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23320 AT2G23320 |
| fragaria_vesca | FvH4_1g16480 FvH4_1g16480 |
| malus_domestica | MD02G1177500.v1.1 MD15G1287300.v1.1 |
| prunus_persica | Prupe.6G230600_v2.0.a1 |
| pyrus_communis | pycom02g14340 pycom15g25080 |
| rosa_chinensis | RchiOBHm_Chr2g0106361 |
| rosa_laevigata | RLG00000017492 |
| rosa_multiflora | Rmu_sc0016473.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00137250 |
| rosa_rugosa | Rorug02G0135000 |
| rosa_samantha | Rh2AG186100 Rh2BG196300 Rh2CG191100 Rh2DG192200 |
| rosa_wichuraiana | Rw2G014510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 219, 509 |
| AccI | GTMKAC | 1 cut(s) | 179 |
| AccII | CGCG | 1 cut(s) | 212 |
| AccIII | TCCGGA | 1 cut(s) | 311 |
| AclWI | GGATC | 5 cut(s) | 322, 343, 400, 409, 832 |
| AcoI | YGGCCR | 3 cut(s) | 3, 691, 765 |
| AcsI | RAATTY | 1 cut(s) | 484 |
| AcyI | GRCGYC | 3 cut(s) | 216, 401, 506 |
| AfaI | GTAC | 2 cut(s) | 445, 803 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 285, 445, 821 |
| AflIII | ACRYGT | 1 cut(s) | 886 |
| AgeI | ACCGGT | 1 cut(s) | 269 |
| AgsI | TTSAA | 4 cut(s) | 235, 572, 634, 760 |
| AjnI | CCWGG | 2 cut(s) | 141, 791 |
| AluBI | AGCT | 7 cut(s) | 57, 98, 124, 309, 648, 718, 899 |
| AluI | AGCT | 7 cut(s) | 57, 98, 124, 309, 648, 718, 899 |
| Alw21I | GWGCWC | 4 cut(s) | 311, 461, 901, 945 |
| Alw26I | GTCTC | 2 cut(s) | 525, 715 |
| AlwI | GGATC | 5 cut(s) | 322, 343, 400, 409, 832 |
| Ama87I | CYCGRG | 1 cut(s) | 107 |
| Aor13HI | TCCGGA | 1 cut(s) | 311 |
| AoxI | GGCC | 4 cut(s) | 3, 103, 691, 765 |
| ApeKI | GCWGC | 8 cut(s) | 42, 45, 54, 95, 547, 645, 696, 855 |
| ApoI | RAATTY | 1 cut(s) | 484 |
| AsiGI | ACCGGT | 1 cut(s) | 269 |
| AspS9I | GGNCC | 3 cut(s) | 261, 267, 684 |
| AsuC2I | CCSGG | 4 cut(s) | 265, 280, 746, 875 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 419 |
| AvaI | CYCGRG | 1 cut(s) | 107 |
| AvaII | GGWCC | 3 cut(s) | 261, 267, 684 |
| BanII | GRGCYC | 3 cut(s) | 295, 311, 901 |
| BbsI | GAAGAC | 1 cut(s) | 312 |
| Bbv12I | GWGCWC | 4 cut(s) | 311, 461, 901, 945 |
| BbvCI | CCTCAGC | 1 cut(s) | 598 |
| BbvI | GCAGC | 8 cut(s) | 54, 57, 66, 107, 559, 657, 683, 867 |
| BccI | CCATC | 2 cut(s) | 41, 824 |
| BceAI | ACGGC | 3 cut(s) | 68, 191, 198 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 190, 224 |
| BciT130I | CCWGG | 2 cut(s) | 143, 793 |
| BciVI | GTATCC | 2 cut(s) | 504, 836 |
| BcnI | CCSGG | 4 cut(s) | 265, 280, 746, 875 |
| BcoDI | GTCTC | 2 cut(s) | 525, 715 |
| BfaI | CTAG | 2 cut(s) | 920, 986 |
| BfmI | CTRYAG | 1 cut(s) | 199 |
| BfuI | GTATCC | 2 cut(s) | 504, 836 |
| Bme1390I | CCNGG | 6 cut(s) | 143, 265, 280, 746, 793, 875 |
| Bme18I | GGWCC | 3 cut(s) | 261, 267, 684 |
| BmeT110I | CYCGRG | 1 cut(s) | 107 |
| BmgT120I | GGNCC | 3 cut(s) | 261, 267, 684 |
| BmiI | GGNNCC | 3 cut(s) | 263, 284, 685 |
| BmrFI | CCNGG | 6 cut(s) | 143, 265, 280, 746, 793, 875 |
| BmsI | GCATC | 2 cut(s) | 860, 898 |
| BpiI | GAAGAC | 1 cut(s) | 312 |
| BpmI | CTGGAG | 1 cut(s) | 814 |
| Bpu10I | CCTNAGC | 1 cut(s) | 598 |
| BpuEI | CTTGAG | 1 cut(s) | 473 |
| BpuMI | CCSGG | 4 cut(s) | 265, 280, 746, 875 |
| BsaAI | YACGTR | 1 cut(s) | 889 |
| BsaHI | GRCGYC | 3 cut(s) | 216, 401, 506 |
| BsaJI | CCNNGG | 4 cut(s) | 141, 163, 439, 836 |
| BsaWI | WCCGGW | 4 cut(s) | 269, 311, 373, 527 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 773, 803 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 285, 445, 821 |
| Bse118I | RCCGGY | 1 cut(s) | 269 |
| Bse3DI | GCAATG | 2 cut(s) | 700, 921 |
| BseAI | TCCGGA | 1 cut(s) | 311 |
| BseBI | CCWGG | 2 cut(s) | 143, 793 |
| BseDI | CCNNGG | 4 cut(s) | 141, 163, 439, 836 |
| BseGI | GGATG | 2 cut(s) | 832, 875 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 285, 445, 821 |
| BseMI | GCAATG | 2 cut(s) | 700, 921 |
| BseMII | CTCAG | 3 cut(s) | 612, 710, 972 |
| BseX3I | CGGCCG | 1 cut(s) | 691 |
| BseXI | GCAGC | 8 cut(s) | 54, 57, 66, 107, 559, 657, 683, 867 |
| BseYI | CCCAGC | 1 cut(s) | 680 |
| BsgI | GTGCAG | 2 cut(s) | 107, 664 |
| Bsh1236I | CGCG | 1 cut(s) | 212 |
| Bsh1285I | CGRYCG | 1 cut(s) | 694 |
| BshFI | GGCC | 4 cut(s) | 5, 105, 693, 767 |
| BshTI | ACCGGT | 1 cut(s) | 269 |
| BsiEI | CGRYCG | 1 cut(s) | 694 |
| BsiHKAI | GWGCWC | 4 cut(s) | 311, 461, 901, 945 |
| BsiHKCI | CYCGRG | 1 cut(s) | 107 |
| BslFI | GGGAC | 2 cut(s) | 124, 728 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 285, 445, 821 |
| BsmAI | GTCTC | 2 cut(s) | 525, 715 |
| BsmFI | GGGAC | 2 cut(s) | 124, 728 |
| BsnI | GGCC | 4 cut(s) | 5, 105, 693, 767 |
| BsoBI | CYCGRG | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 5 cut(s) | 295, 311, 461, 901, 945 |
| Bsp13I | TCCGGA | 1 cut(s) | 311 |
| Bsp143I | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| BspANI | GGCC | 4 cut(s) | 5, 105, 693, 767 |
| BspCNI | CTCAG | 3 cut(s) | 611, 711, 971 |
| BspEI | TCCGGA | 1 cut(s) | 311 |
| BspFNI | CGCG | 1 cut(s) | 212 |
| BspLI | GGNNCC | 3 cut(s) | 263, 284, 685 |
| BspMAI | CTGCAG | 1 cut(s) | 203 |
| BspPI | GGATC | 5 cut(s) | 322, 343, 400, 409, 832 |
| BsrDI | GCAATG | 2 cut(s) | 700, 921 |
| BsrFI | RCCGGY | 1 cut(s) | 269 |
| BssAI | RCCGGY | 1 cut(s) | 269 |
| BssECI | CCNNGG | 4 cut(s) | 141, 163, 439, 836 |
| BssMI | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| BssNI | GRCGYC | 3 cut(s) | 216, 401, 506 |
| BssT1I | CCWWGG | 2 cut(s) | 163, 836 |
| Bst2UI | CCWGG | 2 cut(s) | 143, 793 |
| Bst4CI | ACNGT | 2 cut(s) | 443, 448 |
| Bst6I | CTCTTC | 4 cut(s) | 69, 255, 704, 722 |
| BstACI | GRCGYC | 3 cut(s) | 216, 401, 506 |
| BstBAI | YACGTR | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 4 cut(s) | 134, 291, 545, 941 |
| BstDEI | CTNAG | 6 cut(s) | 384, 462, 598, 719, 958, 996 |
| BstDSI | CCRYGG | 1 cut(s) | 439 |
| BstEII | GGTNACC | 1 cut(s) | 925 |
| BstF5I | GGATG | 2 cut(s) | 832, 875 |
| BstFNI | CGCG | 1 cut(s) | 212 |
| BstKTI | GATC | 5 cut(s) | 317, 351, 408, 417, 827 |
| BstMAI | GTCTC | 2 cut(s) | 525, 715 |
| BstMBI | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| BstMCI | CGRYCG | 1 cut(s) | 694 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 51, 54, 111, 157, 218, 409, 418, 702 |
| BstNI | CCWGG | 2 cut(s) | 143, 793 |
| BstNSI | RCATGY | 1 cut(s) | 365 |
| BstPI | GGTNACC | 1 cut(s) | 925 |
| BstSCI | CCNGG | 6 cut(s) | 141, 263, 278, 744, 791, 873 |
| BstSFI | CTRYAG | 1 cut(s) | 199 |
| BstUI | CGCG | 1 cut(s) | 212 |
| BstV1I | GCAGC | 8 cut(s) | 54, 57, 66, 107, 559, 657, 683, 867 |
| BstV2I | GAAGAC | 1 cut(s) | 312 |
| BstX2I | RGATCY | 3 cut(s) | 348, 414, 824 |
| BstYI | RGATCY | 3 cut(s) | 348, 414, 824 |
| BstZI | CGGCCG | 1 cut(s) | 691 |
| BsuI | GTATCC | 2 cut(s) | 504, 836 |
| BsuRI | GGCC | 4 cut(s) | 5, 105, 693, 767 |
| BtgI | CCRYGG | 1 cut(s) | 439 |
| BtsCI | GGATG | 2 cut(s) | 832, 875 |
| BtsI | GCAGTG | 1 cut(s) | 865 |
| BtsIMutI | CAGTG | 1 cut(s) | 865 |
| Cac8I | GCNNGC | 4 cut(s) | 134, 291, 545, 941 |
| Cfr10I | RCCGGY | 1 cut(s) | 269 |
| Cfr13I | GGNCC | 3 cut(s) | 261, 267, 684 |
| CpoI | CGGWCCG | 1 cut(s) | 267 |
| CseI | GACGC | 2 cut(s) | 103, 409 |
| Csp6I | GTAC | 2 cut(s) | 444, 802 |
| CspAI | ACCGGT | 1 cut(s) | 269 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 903, 938 |
| CspI | CGGWCCG | 1 cut(s) | 267 |
| CviAII | CATG | 4 cut(s) | 16, 193, 362, 395 |
| CviQI | GTAC | 2 cut(s) | 444, 802 |
| DdeI | CTNAG | 6 cut(s) | 384, 462, 598, 719, 958, 996 |
| DpnI | GATC | 5 cut(s) | 316, 350, 407, 416, 826 |
| DpnII | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| EaeI | YGGCCR | 3 cut(s) | 3, 691, 765 |
| EagI | CGGCCG | 1 cut(s) | 691 |
| Eam1104I | CTCTTC | 4 cut(s) | 69, 255, 704, 722 |
| EarI | CTCTTC | 4 cut(s) | 69, 255, 704, 722 |
| EciI | GGCGGA | 2 cut(s) | 52, 613 |
| Ecl136II | GAGCTC | 2 cut(s) | 309, 899 |
| EclXI | CGGCCG | 1 cut(s) | 691 |
| Eco130I | CCWWGG | 2 cut(s) | 163, 836 |
| Eco24I | GRGCYC | 3 cut(s) | 295, 311, 901 |
| Eco32I | GATATC | 1 cut(s) | 772 |
| Eco47I | GGWCC | 3 cut(s) | 261, 267, 684 |
| Eco52I | CGGCCG | 1 cut(s) | 691 |
| Eco53kI | GAGCTC | 2 cut(s) | 309, 899 |
| Eco88I | CYCGRG | 1 cut(s) | 107 |
| Eco91I | GGTNACC | 1 cut(s) | 925 |
| EcoICRI | GAGCTC | 2 cut(s) | 309, 899 |
| EcoO109I | RGGNCCY | 1 cut(s) | 684 |
| EcoO65I | GGTNACC | 1 cut(s) | 925 |
| EcoRII | CCWGG | 2 cut(s) | 141, 791 |
| EcoRV | GATATC | 1 cut(s) | 772 |
| EcoT14I | CCWWGG | 2 cut(s) | 163, 836 |
| EcoT38I | GRGCYC | 3 cut(s) | 295, 311, 901 |
| ErhI | CCWWGG | 2 cut(s) | 163, 836 |
| FaeI | CATG | 4 cut(s) | 19, 196, 365, 398 |
| FaiI | YATR | 9 cut(s) | 17, 188, 194, 363, 396, 482, 515, 584, 752 |
| FaqI | GGGAC | 2 cut(s) | 124, 728 |
| FatI | CATG | 4 cut(s) | 15, 192, 361, 394 |
| FauI | CCCGC | 1 cut(s) | 426 |
| FblI | GTMKAC | 1 cut(s) | 179 |
| FokI | GGATG | 2 cut(s) | 819, 882 |
| FriOI | GRGCYC | 3 cut(s) | 295, 311, 901 |
| FspBI | CTAG | 2 cut(s) | 920, 986 |
| GsaI | CCCAGC | 1 cut(s) | 684 |
| GsuI | CTGGAG | 1 cut(s) | 814 |
| HaeIII | GGCC | 4 cut(s) | 5, 105, 693, 767 |
| HgaI | GACGC | 2 cut(s) | 103, 409 |
| Hin1I | GRCGYC | 3 cut(s) | 216, 401, 506 |
| Hin1II | CATG | 4 cut(s) | 19, 196, 365, 398 |
| HincII | GTYRAC | 1 cut(s) | 180 |
| HindII | GTYRAC | 1 cut(s) | 180 |
| HindIII | AAGCTT | 1 cut(s) | 122 |
| HinfI | GANTC | 5 cut(s) | 377, 467, 533, 741, 989 |
| HphI | GGTGA | 2 cut(s) | 28, 419 |
| Hpy166II | GTNNAC | 3 cut(s) | 180, 381, 391 |
| Hpy188I | TCNGA | 4 cut(s) | 73, 261, 538, 652 |
| Hpy188III | TCNNGA | 7 cut(s) | 109, 118, 235, 312, 736, 902, 986 |
| Hpy8I | GTNNAC | 3 cut(s) | 180, 381, 391 |
| Hpy99I | CGWCG | 8 cut(s) | 119, 181, 184, 212, 221, 403, 508, 511 |
| HpyAV | CCTTC | 2 cut(s) | 232, 929 |
| HpyCH4III | ACNGT | 2 cut(s) | 443, 448 |
| HpyCH4IV | ACGT | 3 cut(s) | 216, 506, 888 |
| HpyCH4V | TGCA | 6 cut(s) | 88, 201, 645, 705, 855, 965 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 51, 54, 111, 157, 218, 409, 418, 702 |
| HpyF3I | CTNAG | 6 cut(s) | 384, 462, 598, 719, 958, 996 |
| HpySE526I | ACGT | 3 cut(s) | 216, 506, 888 |
| Hsp92I | GRCGYC | 3 cut(s) | 216, 401, 506 |
| Hsp92II | CATG | 4 cut(s) | 19, 196, 365, 398 |
| Kpn2I | TCCGGA | 1 cut(s) | 311 |
| Kzo9I | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| LmnI | GCTCC | 2 cut(s) | 314, 653 |
| Lsp1109I | GCAGC | 8 cut(s) | 54, 57, 66, 107, 559, 657, 683, 867 |
| LweI | GCATC | 2 cut(s) | 860, 898 |
| MaeI | CTAG | 2 cut(s) | 920, 986 |
| MaeII | ACGT | 3 cut(s) | 216, 506, 888 |
| MaeIII | GTNAC | 5 cut(s) | 20, 272, 369, 585, 925 |
| MalI | GATC | 5 cut(s) | 316, 350, 407, 416, 826 |
| MboI | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| MboII | GAAGA | 6 cut(s) | 86, 242, 312, 721, 739, 984 |
| MflI | RGATCY | 3 cut(s) | 348, 414, 824 |
| MhlI | GDGCHC | 5 cut(s) | 295, 311, 461, 901, 945 |
| MluCI | AATT | 2 cut(s) | 484, 573 |
| MlyI | GAGTC | 4 cut(s) | 386, 461, 527, 750 |
| MmeI | TCCRAC | 2 cut(s) | 51, 239 |
| MroI | TCCGGA | 1 cut(s) | 311 |
| MseI | TTAA | 1 cut(s) | 524 |
| MspA1I | CMGCKG | 1 cut(s) | 696 |
| MspR9I | CCNGG | 6 cut(s) | 143, 265, 280, 746, 793, 875 |
| MvaI | CCWGG | 2 cut(s) | 143, 793 |
| MvnI | CGCG | 1 cut(s) | 212 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 51, 54, 111, 157, 218, 409, 418, 702 |
| NciI | CCSGG | 4 cut(s) | 265, 280, 746, 875 |
| NdeII | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| NlaIII | CATG | 4 cut(s) | 19, 196, 365, 398 |
| NlaIV | GGNNCC | 3 cut(s) | 263, 284, 685 |
| NmuCI | GTSAC | 2 cut(s) | 272, 585 |
| NspI | RCATGY | 1 cut(s) | 365 |
| PaeR7I | CTCGAG | 1 cut(s) | 107 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 114, 515 |
| PfeI | GAWTC | 1 cut(s) | 989 |
| PfoI | TCCNGGA | 1 cut(s) | 791 |
| PinAI | ACCGGT | 1 cut(s) | 269 |
| PleI | GAGTC | 4 cut(s) | 385, 461, 527, 749 |
| PpsI | GAGTC | 4 cut(s) | 385, 461, 527, 749 |
| Ppu21I | YACGTR | 1 cut(s) | 889 |
| PpuMI | RGGWCCY | 1 cut(s) | 684 |
| Psp124BI | GAGCTC | 2 cut(s) | 311, 901 |
| Psp5II | RGGWCCY | 1 cut(s) | 684 |
| Psp6I | CCWGG | 2 cut(s) | 141, 791 |
| PspEI | GGTNACC | 1 cut(s) | 925 |
| PspFI | CCCAGC | 1 cut(s) | 680 |
| PspGI | CCWGG | 2 cut(s) | 141, 791 |
| PspN4I | GGNNCC | 3 cut(s) | 263, 284, 685 |
| PspPI | GGNCC | 3 cut(s) | 261, 267, 684 |
| PspPPI | RGGWCCY | 1 cut(s) | 684 |
| PstI | CTGCAG | 1 cut(s) | 203 |
| PsuI | RGATCY | 3 cut(s) | 348, 414, 824 |
| RsaI | GTAC | 2 cut(s) | 445, 803 |
| RsaNI | GTAC | 2 cut(s) | 444, 802 |
| Rsr2I | CGGWCCG | 1 cut(s) | 267 |
| RsrII | CGGWCCG | 1 cut(s) | 267 |
| SacI | GAGCTC | 2 cut(s) | 311, 901 |
| SalI | GTCGAC | 1 cut(s) | 178 |
| SaqAI | TTAA | 1 cut(s) | 524 |
| Sau3AI | GATC | 5 cut(s) | 314, 348, 405, 414, 824 |
| Sau96I | GGNCC | 3 cut(s) | 261, 267, 684 |
| SchI | GAGTC | 4 cut(s) | 386, 461, 527, 750 |
| ScrFI | CCNGG | 6 cut(s) | 143, 265, 280, 746, 793, 875 |
| SduI | GDGCHC | 5 cut(s) | 295, 311, 461, 901, 945 |
| SfaNI | GCATC | 2 cut(s) | 860, 898 |
| SfcI | CTRYAG | 1 cut(s) | 199 |
| Sfr274I | CTCGAG | 1 cut(s) | 107 |
| SgrDI | CGTCGACG | 1 cut(s) | 178 |
| SinI | GGWCC | 3 cut(s) | 261, 267, 684 |
| SlaI | CTCGAG | 1 cut(s) | 107 |
| SmlI | CTYRAG | 2 cut(s) | 107, 452 |
| SmoI | CTYRAG | 2 cut(s) | 107, 452 |
| Sse9I | AATT | 2 cut(s) | 484, 573 |
| SspMI | CTAG | 2 cut(s) | 920, 986 |
| SstI | GAGCTC | 2 cut(s) | 311, 901 |
| StyD4I | CCNGG | 6 cut(s) | 141, 263, 278, 744, 791, 873 |
| StyI | CCWWGG | 2 cut(s) | 163, 836 |
| TaaI | ACNGT | 2 cut(s) | 443, 448 |
| TaiI | ACGT | 3 cut(s) | 219, 509, 891 |
| TaqI | TCGA | 4 cut(s) | 108, 117, 179, 880 |
| TasI | AATT | 2 cut(s) | 484, 573 |
| TauI | GCSGC | 4 cut(s) | 613, 616, 696, 914 |
| TfiI | GAWTC | 1 cut(s) | 989 |
| Tru1I | TTAA | 1 cut(s) | 524 |
| Tru9I | TTAA | 1 cut(s) | 524 |
| TscAI | CASTG | 1 cut(s) | 865 |
| TseFI | GTSAC | 2 cut(s) | 272, 585 |
| TseI | GCWGC | 8 cut(s) | 42, 45, 54, 95, 547, 645, 696, 855 |
| Tsp45I | GTSAC | 2 cut(s) | 272, 585 |
| TspDTI | ATGAA | 1 cut(s) | 4 |
| TspGWI | ACGGA | 3 cut(s) | 165, 357, 819 |
| TspRI | CASTG | 1 cut(s) | 865 |
| VpaK11BI | GGWCC | 3 cut(s) | 261, 267, 684 |
| XapI | RAATTY | 1 cut(s) | 484 |
| XbaI | TCTAGA | 1 cut(s) | 985 |
| XceI | RCATGY | 1 cut(s) | 365 |
| XhoI | CTCGAG | 1 cut(s) | 107 |
| XmiI | GTMKAC | 1 cut(s) | 179 |
| XspI | CTAG | 2 cut(s) | 920, 986 |
| ZraI | GACGTC | 2 cut(s) | 217, 507 |