E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02310 AT5G02310 AT5G02310 |
| fragaria_vesca | FvH4_6g13660 FvH4_6g13660 FvH4_6g13660 FvH4_6g13660 FvH4_6g13660 |
| malus_domestica | MD04G1129300.v1.1 MD12G1142100.v1.1 |
| prunus_persica | Prupe.6G255500_v2.0.a1 Prupe.6G255500_v2.0.a1 Prupe.6G255500_v2.0.a1 |
| pyrus_communis | pycom04g11750 pycom12g13690 |
| rosa_chinensis | RchiOBHm_Chr3g0466531 |
| rosa_laevigata | RLG00000024565 |
| rosa_multiflora | Rmu_sc0003332.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00414400 |
| rosa_rugosa | Rorug03G0082300 |
| rosa_samantha | Rh3AG129300 Rh3BG150600 Rh3CG150400 Rh3DG151300 |
| rosa_wichuraiana | Rw3G012220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 5337 |
| Acc36I | ACCTGC | 1 cut(s) | 184 |
| Acc65I | GGTACC | 1 cut(s) | 3835 |
| AccB1I | GGYRCC | 4 cut(s) | 402, 2015, 3835, 4231 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3200 |
| AccBSI | CCGCTC | 1 cut(s) | 34 |
| AccI | GTMKAC | 2 cut(s) | 1822, 4447 |
| AccII | CGCG | 3 cut(s) | 543, 3040, 6004 |
| AclWI | GGATC | 8 cut(s) | 480, 2306, 2856, 3641, 4128, 4403, 5123, 5141 |
| AcoI | YGGCCR | 4 cut(s) | 2060, 3208, 5085, 6017 |
| AcvI | CACGTG | 1 cut(s) | 3974 |
| AcyI | GRCGYC | 2 cut(s) | 4029, 5334 |
| AfeI | AGCGCT | 1 cut(s) | 2525 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 595, 1800, 2945, 3200, 3732, 3733, 3894, 4418 |
| AflII | CTTAAG | 1 cut(s) | 5645 |
| AflIII | ACRYGT | 6 cut(s) | 410, 428, 2038, 3765, 5039, 5074 |
| AgeI | ACCGGT | 1 cut(s) | 5190 |
| AjnI | CCWGG | 7 cut(s) | 1712, 1923, 4477, 4757, 5223, 5784, 6014 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4228, 4260 |
| AleI | CACNNNNGTG | 1 cut(s) | 5570 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1558, 1590 |
| Alw21I | GWGCWC | 4 cut(s) | 3046, 3765, 5232, 5589 |
| Alw26I | GTCTC | 8 cut(s) | 1297, 3475, 4010, 4181, 4501, 4512, 5251, 5341 |
| Alw44I | GTGCAC | 1 cut(s) | 5228 |
| AlwI | GGATC | 8 cut(s) | 480, 2306, 2856, 3641, 4128, 4403, 5123, 5141 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4754 |
| Ama87I | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| Aor51HI | AGCGCT | 1 cut(s) | 2525 |
| ApaLI | GTGCAC | 1 cut(s) | 5228 |
| AseI | ATTAAT | 2 cut(s) | 1937, 4572 |
| AsiGI | ACCGGT | 1 cut(s) | 5190 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 198, 1224, 5681 |
| Asp718I | GGTACC | 1 cut(s) | 3835 |
| AspA2I | CCTAGG | 1 cut(s) | 3902 |
| AspLEI | GCGC | 6 cut(s) | 543, 2526, 3206, 3462, 5578, 6004 |
| AsuC2I | CCSGG | 4 cut(s) | 219, 683, 1538, 5906 |
| AsuII | TTCGAA | 1 cut(s) | 5511 |
| AsuNHI | GCTAGC | 2 cut(s) | 1457, 3533 |
| AvaI | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| AvaII | GGWCC | 5 cut(s) | 3191, 3722, 4544, 5788, 5845 |
| AvrII | CCTAGG | 1 cut(s) | 3902 |
| AxyI | CCTNAGG | 1 cut(s) | 84 |
| BaeGI | GKGCMC | 3 cut(s) | 1257, 5232, 5775 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2863, 2896, 5940, 5973 |
| BalI | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| BanI | GGYRCC | 4 cut(s) | 402, 2015, 3835, 4231 |
| BanII | GRGCYC | 2 cut(s) | 3046, 5589 |
| BauI | CACGAG | 3 cut(s) | 42, 2697, 5142 |
| BbrPI | CACGTG | 1 cut(s) | 3974 |
| BbsI | GAAGAC | 2 cut(s) | 628, 4032 |
| Bbv12I | GWGCWC | 4 cut(s) | 3046, 3765, 5232, 5589 |
| BbvCI | CCTCAGC | 1 cut(s) | 2316 |
| BceAI | ACGGC | 2 cut(s) | 4428, 5072 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 1342, 1376, 1572, 1606, 2276, 2310, 6083, 6117 |
| BciT130I | CCWGG | 7 cut(s) | 1714, 1925, 4479, 4759, 5225, 5786, 6016 |
| BciVI | GTATCC | 4 cut(s) | 141, 1035, 2731, 5554 |
| BclI | TGATCA | 6 cut(s) | 97, 2716, 3124, 3793, 5967, 6139 |
| BcnI | CCSGG | 4 cut(s) | 219, 683, 1538, 5906 |
| BcoDI | GTCTC | 8 cut(s) | 1297, 3475, 4010, 4181, 4501, 4512, 5251, 5341 |
| BfmI | CTRYAG | 8 cut(s) | 1248, 1980, 2859, 3618, 4614, 4661, 5250, 5745 |
| BfoI | RGCGCY | 3 cut(s) | 2527, 3207, 5579 |
| BfrI | CTTAAG | 1 cut(s) | 5645 |
| BfuAI | ACCTGC | 1 cut(s) | 184 |
| BfuI | GTATCC | 4 cut(s) | 141, 1035, 2731, 5554 |
| BglII | AGATCT | 2 cut(s) | 1292, 5534 |
| BlnI | CCTAGG | 1 cut(s) | 3902 |
| BmcAI | AGTACT | 2 cut(s) | 1744, 4799 |
| Bme18I | GGWCC | 5 cut(s) | 3191, 3722, 4544, 5788, 5845 |
| BmeT110I | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| BmrI | ACTGGG | 1 cut(s) | 5961 |
| BmtI | GCTAGC | 2 cut(s) | 1461, 3537 |
| BmuI | ACTGGG | 1 cut(s) | 5961 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1531, 3720 |
| BpiI | GAAGAC | 2 cut(s) | 628, 4032 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 52, 84, 4481, 4513 |
| BpmI | CTGGAG | 2 cut(s) | 1696, 2436 |
| Bpu10I | CCTNAGC | 2 cut(s) | 35, 2316 |
| Bpu14I | TTCGAA | 1 cut(s) | 5511 |
| BpuEI | CTTGAG | 6 cut(s) | 1693, 2512, 2540, 2827, 5458, 5861 |
| BpuMI | CCSGG | 4 cut(s) | 219, 683, 1538, 5906 |
| Bsa29I | ATCGAT | 1 cut(s) | 259 |
| BsaAI | YACGTR | 3 cut(s) | 2039, 3076, 3974 |
| BsaHI | GRCGYC | 2 cut(s) | 4029, 5334 |
| BsaI | GGTCTC | 1 cut(s) | 4501 |
| BsaWI | WCCGGW | 1 cut(s) | 5190 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1558, 1588, 2587, 2617, 3752, 3782 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 595, 1800, 2945, 3200, 3732, 3733, 3894, 4418 |
| Bse118I | RCCGGY | 2 cut(s) | 3939, 5190 |
| Bse1I | ACTGG | 5 cut(s) | 502, 1830, 4546, 5758, 5956 |
| Bse21I | CCTNAGG | 1 cut(s) | 84 |
| Bse3DI | GCAATG | 4 cut(s) | 1862, 2655, 3068, 5465 |
| BseBI | CCWGG | 7 cut(s) | 1714, 1925, 4479, 4759, 5225, 5786, 6016 |
| BseCI | ATCGAT | 1 cut(s) | 259 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 595, 1800, 2945, 3200, 3732, 3733, 3894, 4418 |
| BseMI | GCAATG | 4 cut(s) | 1862, 2655, 3068, 5465 |
| BseNI | ACTGG | 5 cut(s) | 502, 1830, 4546, 5758, 5956 |
| BseRI | GAGGAG | 3 cut(s) | 101, 611, 1582 |
| BseSI | GKGCMC | 3 cut(s) | 1257, 5232, 5775 |
| BseYI | CCCAGC | 4 cut(s) | 916, 970, 1693, 3287 |
| BsgI | GTGCAG | 5 cut(s) | 1578, 1938, 2573, 3015, 4809 |
| Bsh1236I | CGCG | 3 cut(s) | 543, 3040, 6004 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1165 |
| BshNI | GGYRCC | 4 cut(s) | 402, 2015, 3835, 4231 |
| BshTI | ACCGGT | 1 cut(s) | 5190 |
| BshVI | ATCGAT | 1 cut(s) | 259 |
| BsiEI | CGRYCG | 1 cut(s) | 1165 |
| BsiHKAI | GWGCWC | 4 cut(s) | 3046, 3765, 5232, 5589 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| BsiSI | CCGG | 6 cut(s) | 218, 682, 1538, 3940, 5191, 5905 |
| BslFI | GGGAC | 5 cut(s) | 1519, 2794, 3708, 4203, 4799 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 595, 1800, 2945, 3200, 3732, 3733, 3894, 4418 |
| BsmAI | GTCTC | 8 cut(s) | 1297, 3475, 4010, 4181, 4501, 4512, 5251, 5341 |
| BsmBI | CGTCTC | 1 cut(s) | 5341 |
| BsmFI | GGGAC | 5 cut(s) | 1519, 2794, 3708, 4203, 4799 |
| BsmI | GAATGC | 2 cut(s) | 4075, 4513 |
| Bso31I | GGTCTC | 1 cut(s) | 4501 |
| BsoBI | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| Bsp119I | TTCGAA | 1 cut(s) | 5511 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1257, 3046, 3765, 5232, 5589, 5775 |
| Bsp1407I | TGTACA | 1 cut(s) | 4007 |
| Bsp19I | CCATGG | 3 cut(s) | 2001, 2019, 5026 |
| Bsp68I | TCGCGA | 1 cut(s) | 3040 |
| BspDI | ATCGAT | 1 cut(s) | 259 |
| BspFNI | CGCG | 3 cut(s) | 543, 3040, 6004 |
| BspHI | TCATGA | 4 cut(s) | 475, 1270, 3643, 5539 |
| BspMAI | CTGCAG | 6 cut(s) | 1984, 2863, 3622, 4618, 4665, 5749 |
| BspMI | ACCTGC | 1 cut(s) | 184 |
| BspOI | GCTAGC | 2 cut(s) | 1461, 3537 |
| BspPI | GGATC | 8 cut(s) | 480, 2306, 2856, 3641, 4128, 4403, 5123, 5141 |
| BspQI | GCTCTTC | 3 cut(s) | 3817, 3924, 5404 |
| BspT104I | TTCGAA | 1 cut(s) | 5511 |
| BspT107I | GGYRCC | 4 cut(s) | 402, 2015, 3835, 4231 |
| BspTI | CTTAAG | 1 cut(s) | 5645 |
| BspTNI | GGTCTC | 1 cut(s) | 4501 |
| BsrBI | CCGCTC | 1 cut(s) | 34 |
| BsrDI | GCAATG | 4 cut(s) | 1862, 2655, 3068, 5465 |
| BsrFI | RCCGGY | 2 cut(s) | 3939, 5190 |
| BsrGI | TGTACA | 1 cut(s) | 4007 |
| BsrI | ACTGG | 5 cut(s) | 502, 1830, 4546, 5758, 5956 |
| BssAI | RCCGGY | 2 cut(s) | 3939, 5190 |
| BssNI | GRCGYC | 2 cut(s) | 4029, 5334 |
| BssSI | CACGAG | 3 cut(s) | 42, 2697, 5142 |
| BssT1I | CCWWGG | 6 cut(s) | 2001, 2019, 2445, 3902, 5026, 6150 |
| Bst2BI | CACGAG | 3 cut(s) | 42, 2697, 5142 |
| Bst2UI | CCWGG | 7 cut(s) | 1714, 1925, 4479, 4759, 5225, 5786, 6016 |
| Bst6I | CTCTTC | 9 cut(s) | 2697, 3307, 3606, 3817, 3924, 4584, 4959, 5404, 6042 |
| BstACI | GRCGYC | 2 cut(s) | 4029, 5334 |
| BstAFI | CTTAAG | 1 cut(s) | 5645 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2560, 4321 |
| BstAUI | TGTACA | 1 cut(s) | 4007 |
| BstBAI | YACGTR | 3 cut(s) | 2039, 3076, 3974 |
| BstBI | TTCGAA | 1 cut(s) | 5511 |
| BstDSI | CCRYGG | 3 cut(s) | 2001, 2019, 5026 |
| BstEII | GGTNACC | 2 cut(s) | 1174, 5326 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 593 |
| BstFNI | CGCG | 3 cut(s) | 543, 3040, 6004 |
| BstH2I | RGCGCY | 3 cut(s) | 2527, 3207, 5579 |
| BstHHI | GCGC | 6 cut(s) | 543, 2526, 3206, 3462, 5578, 6004 |
| BstMAI | GTCTC | 8 cut(s) | 1297, 3475, 4010, 4181, 4501, 4512, 5251, 5341 |
| BstMCI | CGRYCG | 1 cut(s) | 1165 |
| BstNI | CCWGG | 7 cut(s) | 1714, 1925, 4479, 4759, 5225, 5786, 6016 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1531, 3720 |
| BstPI | GGTNACC | 2 cut(s) | 1174, 5326 |
| BstSFI | CTRYAG | 8 cut(s) | 1248, 1980, 2859, 3618, 4614, 4661, 5250, 5745 |
| BstSLI | GKGCMC | 3 cut(s) | 1257, 5232, 5775 |
| BstUI | CGCG | 3 cut(s) | 543, 3040, 6004 |
| BstV2I | GAAGAC | 2 cut(s) | 628, 4032 |
| BstX2I | RGATCY | 4 cut(s) | 1292, 2848, 4408, 5534 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1939, 2261, 5572 |
| BstYI | RGATCY | 4 cut(s) | 1292, 2848, 4408, 5534 |
| Bsu15I | ATCGAT | 1 cut(s) | 259 |
| Bsu36I | CCTNAGG | 1 cut(s) | 84 |
| BsuI | GTATCC | 4 cut(s) | 141, 1035, 2731, 5554 |
| BsuTUI | ATCGAT | 1 cut(s) | 259 |
| BtgI | CCRYGG | 3 cut(s) | 2001, 2019, 5026 |
| BtgZI | GCGATG | 1 cut(s) | 1848 |
| BtsI | GCAGTG | 3 cut(s) | 1561, 1566, 3003 |
| BtuMI | TCGCGA | 1 cut(s) | 3040 |
| BveI | ACCTGC | 1 cut(s) | 184 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4754 |
| CciI | TCATGA | 4 cut(s) | 475, 1270, 3643, 5539 |
| CfoI | GCGC | 6 cut(s) | 543, 2526, 3206, 3462, 5578, 6004 |
| Cfr10I | RCCGGY | 2 cut(s) | 3939, 5190 |
| ClaI | ATCGAT | 1 cut(s) | 259 |
| CseI | GACGC | 2 cut(s) | 1625, 4037 |
| CspAI | ACCGGT | 1 cut(s) | 5190 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 594, 629, 4543, 4578 |
| DraI | TTTAAA | 2 cut(s) | 1018, 3852 |
| EaeI | YGGCCR | 4 cut(s) | 2060, 3208, 5085, 6017 |
| Eam1104I | CTCTTC | 9 cut(s) | 2697, 3307, 3606, 3817, 3924, 4584, 4959, 5404, 6042 |
| EarI | CTCTTC | 9 cut(s) | 2697, 3307, 3606, 3817, 3924, 4584, 4959, 5404, 6042 |
| EciI | GGCGGA | 1 cut(s) | 2353 |
| Ecl136II | GAGCTC | 2 cut(s) | 3044, 5587 |
| Eco130I | CCWWGG | 6 cut(s) | 2001, 2019, 2445, 3902, 5026, 6150 |
| Eco147I | AGGCCT | 1 cut(s) | 40 |
| Eco24I | GRGCYC | 2 cut(s) | 3046, 5589 |
| Eco31I | GGTCTC | 1 cut(s) | 4501 |
| Eco47I | GGWCC | 5 cut(s) | 3191, 3722, 4544, 5788, 5845 |
| Eco47III | AGCGCT | 1 cut(s) | 2525 |
| Eco53kI | GAGCTC | 2 cut(s) | 3044, 5587 |
| Eco72I | CACGTG | 1 cut(s) | 3974 |
| Eco81I | CCTNAGG | 1 cut(s) | 84 |
| Eco88I | CYCGRG | 3 cut(s) | 3433, 4894, 5775 |
| Eco91I | GGTNACC | 2 cut(s) | 1174, 5326 |
| EcoICRI | GAGCTC | 2 cut(s) | 3044, 5587 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 593 |
| EcoO109I | RGGNCCY | 4 cut(s) | 617, 3722, 5788, 5845 |
| EcoO65I | GGTNACC | 2 cut(s) | 1174, 5326 |
| EcoRI | GAATTC | 3 cut(s) | 998, 4948, 4980 |
| EcoRII | CCWGG | 7 cut(s) | 1712, 1923, 4477, 4757, 5223, 5784, 6014 |
| EcoT14I | CCWWGG | 6 cut(s) | 2001, 2019, 2445, 3902, 5026, 6150 |
| EcoT22I | ATGCAT | 6 cut(s) | 1386, 1732, 1972, 3255, 4873, 5932 |
| EcoT38I | GRGCYC | 2 cut(s) | 3046, 5589 |
| ErhI | CCWWGG | 6 cut(s) | 2001, 2019, 2445, 3902, 5026, 6150 |
| Esp3I | CGTCTC | 1 cut(s) | 5341 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2964, 2996 |
| FaqI | GGGAC | 5 cut(s) | 1519, 2794, 3708, 4203, 4799 |
| FauI | CCCGC | 3 cut(s) | 4829, 5373, 5857 |
| FauNDI | CATATG | 3 cut(s) | 2074, 2260, 4261 |
| FbaI | TGATCA | 6 cut(s) | 97, 2716, 3124, 3793, 5967, 6139 |
| FblI | GTMKAC | 2 cut(s) | 1822, 4447 |
| FriOI | GRGCYC | 2 cut(s) | 3046, 5589 |
| GlaI | GCGC | 6 cut(s) | 542, 2525, 3205, 3461, 5577, 6003 |
| GsaI | CCCAGC | 4 cut(s) | 920, 974, 1697, 3291 |
| GsuI | CTGGAG | 2 cut(s) | 1696, 2436 |
| HaeII | RGCGCY | 3 cut(s) | 2527, 3207, 5579 |
| HapII | CCGG | 6 cut(s) | 218, 682, 1538, 3940, 5191, 5905 |
| HgaI | GACGC | 2 cut(s) | 1625, 4037 |
| HhaI | GCGC | 6 cut(s) | 543, 2526, 3206, 3462, 5578, 6004 |
| Hin1I | GRCGYC | 2 cut(s) | 4029, 5334 |
| Hin6I | GCGC | 6 cut(s) | 541, 2524, 3204, 3460, 5576, 6002 |
| HinP1I | GCGC | 6 cut(s) | 541, 2524, 3204, 3460, 5576, 6002 |
| HincII | GTYRAC | 4 cut(s) | 741, 1311, 1897, 4448 |
| HindII | GTYRAC | 4 cut(s) | 741, 1311, 1897, 4448 |
| HindIII | AAGCTT | 3 cut(s) | 3217, 3316, 4082 |
| HpaI | GTTAAC | 1 cut(s) | 741 |
| HpaII | CCGG | 6 cut(s) | 218, 682, 1538, 3940, 5191, 5905 |
| Hpy99I | CGWCG | 4 cut(s) | 1952, 2056, 4449, 5336 |
| HpyCH4IV | ACGT | 9 cut(s) | 109, 428, 2038, 2783, 3075, 3594, 3973, 4828, 5334 |
| HpySE526I | ACGT | 9 cut(s) | 109, 428, 2038, 2783, 3075, 3594, 3973, 4828, 5334 |
| Hsp92I | GRCGYC | 2 cut(s) | 4029, 5334 |
| HspAI | GCGC | 6 cut(s) | 541, 2524, 3204, 3460, 5576, 6002 |
| KpnI | GGTACC | 1 cut(s) | 3839 |
| Ksp22I | TGATCA | 6 cut(s) | 97, 2716, 3124, 3793, 5967, 6139 |
| KspAI | GTTAAC | 1 cut(s) | 741 |
| LguI | GCTCTTC | 3 cut(s) | 3817, 3924, 5404 |
| LmnI | GCTCC | 9 cut(s) | 368, 897, 909, 2284, 2410, 2455, 3049, 3760, 6016 |
| MaeII | ACGT | 9 cut(s) | 109, 428, 2038, 2783, 3075, 3594, 3973, 4828, 5334 |
| MbiI | CCGCTC | 1 cut(s) | 34 |
| MfeI | CAATTG | 6 cut(s) | 1410, 2678, 3030, 3274, 3518, 4812 |
| MflI | RGATCY | 4 cut(s) | 1292, 2848, 4408, 5534 |
| MhlI | GDGCHC | 6 cut(s) | 1257, 3046, 3765, 5232, 5589, 5775 |
| MlsI | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| MluNI | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| MlyI | GAGTC | 3 cut(s) | 3443, 3623, 4514 |
| MmeI | TCCRAC | 6 cut(s) | 130, 2034, 2816, 4618, 4751, 5508 |
| Mox20I | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| Mph1103I | ATGCAT | 6 cut(s) | 1386, 1732, 1972, 3255, 4873, 5932 |
| MroXI | GAANNNNTTC | 3 cut(s) | 198, 1224, 5681 |
| MscI | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| MslI | CAYNNNNRTG | 8 cut(s) | 400, 1582, 2259, 2371, 2794, 4518, 5164, 5570 |
| Msp20I | TGGCCA | 3 cut(s) | 2062, 3210, 6019 |
| MspA1I | CMGCKG | 5 cut(s) | 974, 1030, 2456, 4172, 6079 |
| MspCI | CTTAAG | 1 cut(s) | 5645 |
| MspI | CCGG | 6 cut(s) | 218, 682, 1538, 3940, 5191, 5905 |
| MunI | CAATTG | 6 cut(s) | 1410, 2678, 3030, 3274, 3518, 4812 |
| Mva1269I | GAATGC | 2 cut(s) | 4075, 4513 |
| MvaI | CCWGG | 7 cut(s) | 1714, 1925, 4479, 4759, 5225, 5786, 6016 |
| MvnI | CGCG | 3 cut(s) | 543, 3040, 6004 |
| NciI | CCSGG | 4 cut(s) | 219, 683, 1538, 5906 |
| NcoI | CCATGG | 3 cut(s) | 2001, 2019, 5026 |
| NdeI | CATATG | 3 cut(s) | 2074, 2260, 4261 |
| NheI | GCTAGC | 2 cut(s) | 1457, 3533 |
| NmeAIII | GCCGAG | 2 cut(s) | 3538, 4228 |
| NmuCI | GTSAC | 7 cut(s) | 709, 1004, 3225, 3293, 3419, 3787, 5549 |
| NruI | TCGCGA | 1 cut(s) | 3040 |
| NsiI | ATGCAT | 6 cut(s) | 1386, 1732, 1972, 3255, 4873, 5932 |
| NspV | TTCGAA | 1 cut(s) | 5511 |
| OliI | CACNNNNGTG | 1 cut(s) | 5570 |
| PaeI | GCATGC | 2 cut(s) | 4142, 4319 |
| PaeR7I | CTCGAG | 1 cut(s) | 4894 |
| PagI | TCATGA | 4 cut(s) | 475, 1270, 3643, 5539 |
| PceI | AGGCCT | 1 cut(s) | 40 |
| PciI | ACATGT | 4 cut(s) | 410, 3765, 5039, 5074 |
| PciSI | GCTCTTC | 3 cut(s) | 3817, 3924, 5404 |
| PctI | GAATGC | 2 cut(s) | 4075, 4513 |
| PdmI | GAANNNNTTC | 3 cut(s) | 198, 1224, 5681 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3200 |
| PinAI | ACCGGT | 1 cut(s) | 5190 |
| PleI | GAGTC | 3 cut(s) | 3443, 3622, 4513 |
| PmaCI | CACGTG | 1 cut(s) | 3974 |
| PmlI | CACGTG | 1 cut(s) | 3974 |
| PpsI | GAGTC | 3 cut(s) | 3443, 3622, 4513 |
| Ppu21I | YACGTR | 3 cut(s) | 2039, 3076, 3974 |
| PpuMI | RGGWCCY | 3 cut(s) | 3722, 5788, 5845 |
| PscI | ACATGT | 4 cut(s) | 410, 3765, 5039, 5074 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1531, 3720 |
| PshBI | ATTAAT | 2 cut(s) | 1937, 4572 |
| Psp124BI | GAGCTC | 2 cut(s) | 3046, 5589 |
| Psp5II | RGGWCCY | 3 cut(s) | 3722, 5788, 5845 |
| Psp6I | CCWGG | 7 cut(s) | 1712, 1923, 4477, 4757, 5223, 5784, 6014 |
| PspCI | CACGTG | 1 cut(s) | 3974 |
| PspEI | GGTNACC | 2 cut(s) | 1174, 5326 |
| PspFI | CCCAGC | 4 cut(s) | 916, 970, 1693, 3287 |
| PspGI | CCWGG | 7 cut(s) | 1712, 1923, 4477, 4757, 5223, 5784, 6014 |
| PspPPI | RGGWCCY | 3 cut(s) | 3722, 5788, 5845 |
| PspXI | VCTCGAGB | 1 cut(s) | 4894 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 183, 215 |
| PstI | CTGCAG | 6 cut(s) | 1984, 2863, 3622, 4618, 4665, 5749 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4754 |
| PsuI | RGATCY | 4 cut(s) | 1292, 2848, 4408, 5534 |
| PvuII | CAGCTG | 3 cut(s) | 974, 2456, 4172 |
| RruI | TCGCGA | 1 cut(s) | 3040 |
| RseI | CAYNNNNRTG | 8 cut(s) | 400, 1582, 2259, 2371, 2794, 4518, 5164, 5570 |
| SacI | GAGCTC | 2 cut(s) | 3046, 5589 |
| SalI | GTCGAC | 1 cut(s) | 4446 |
| SapI | GCTCTTC | 3 cut(s) | 3817, 3924, 5404 |
| SbfI | CCTGCAGG | 1 cut(s) | 1984 |
| ScaI | AGTACT | 2 cut(s) | 1744, 4799 |
| SchI | GAGTC | 3 cut(s) | 3443, 3623, 4514 |
| SdaI | CCTGCAGG | 1 cut(s) | 1984 |
| SduI | GDGCHC | 6 cut(s) | 1257, 3046, 3765, 5232, 5589, 5775 |
| SfcI | CTRYAG | 8 cut(s) | 1248, 1980, 2859, 3618, 4614, 4661, 5250, 5745 |
| Sfr274I | CTCGAG | 1 cut(s) | 4894 |
| SfuI | TTCGAA | 1 cut(s) | 5511 |
| SinI | GGWCC | 5 cut(s) | 3191, 3722, 4544, 5788, 5845 |
| SlaI | CTCGAG | 1 cut(s) | 4894 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 400, 1582, 2259, 2371, 2794, 4518, 5164, 5570 |
| SmlI | CTYRAG | 8 cut(s) | 1672, 2519, 2527, 2842, 4894, 5437, 5645, 5840 |
| SmoI | CTYRAG | 8 cut(s) | 1672, 2519, 2527, 2842, 4894, 5437, 5645, 5840 |
| SphI | GCATGC | 2 cut(s) | 4142, 4319 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1984 |
| SseBI | AGGCCT | 1 cut(s) | 40 |
| SspI | AATATT | 3 cut(s) | 1056, 5375, 5416 |
| SstI | GAGCTC | 2 cut(s) | 3046, 5589 |
| StuI | AGGCCT | 1 cut(s) | 40 |
| StyI | CCWWGG | 6 cut(s) | 2001, 2019, 2445, 3902, 5026, 6150 |
| TaiI | ACGT | 9 cut(s) | 112, 431, 2041, 2786, 3078, 3597, 3976, 4831, 5337 |
| TatI | WGTACW | 5 cut(s) | 1048, 1742, 4007, 4797, 6081 |
| TauI | GCSGC | 3 cut(s) | 2750, 6007, 6079 |
| TseFI | GTSAC | 7 cut(s) | 709, 1004, 3225, 3293, 3419, 3787, 5549 |
| Tsp45I | GTSAC | 7 cut(s) | 709, 1004, 3225, 3293, 3419, 3787, 5549 |
| TspGWI | ACGGA | 8 cut(s) | 73, 160, 254, 435, 1537, 2873, 2981, 5675 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3200 |
| Vha464I | CTTAAG | 1 cut(s) | 5645 |
| VneI | GTGCAC | 1 cut(s) | 5228 |
| VpaK11BI | GGWCC | 5 cut(s) | 3191, 3722, 4544, 5788, 5845 |
| VspI | ATTAAT | 2 cut(s) | 1937, 4572 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 593 |
| XbaI | TCTAGA | 3 cut(s) | 766, 3922, 4181 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1650, 4779 |
| XhoI | CTCGAG | 1 cut(s) | 4894 |
| XmaJI | CCTAGG | 1 cut(s) | 3902 |
| XmiI | GTMKAC | 2 cut(s) | 1822, 4447 |
| XmnI | GAANNNNTTC | 3 cut(s) | 198, 1224, 5681 |
| ZraI | GACGTC | 1 cut(s) | 5335 |
| ZrmI | AGTACT | 2 cut(s) | 1744, 4799 |
| Zsp2I | ATGCAT | 6 cut(s) | 1386, 1732, 1972, 3255, 4873, 5932 |