Prupe.6G274300_v2.0.a1

UPF0481 protein At3g47200-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
25909454 .. 25911127
1674 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G274300.1

Sequence Viewer

Length: 1497 bp
ATGAGTAATGAGGACATCCTACAACTGGAAGCAGAAGCAACTGATAAGAACGAATGGAAGCGGGAGATTACTAAAAAACTTCACCAGAAAGTGGCAACAGGGTCAGAAAACTTGAGCATTTATAAAGTTCCAAAAAACCTTCGAAAAGTCAAGGATGAAGCATACAACTCTCGTGTTGTCTCAATTGGACCCTTCCATCTAGGCAACCATGCCCTTGTAGCTATGAGACATCATAAATGGCAATACATGCAATATTTTTTTGCACGAATAGAAGATCATCAACAATCCCTCCAATGTTTAGAAGTGTGTACCAATGCTATTTATGATTTAGATGAAAAGGTTCGTGGATGCTATTCCGAAAAGATAGACCACATTGATAAGAATGTGCTAGCAGAAATCATGTTACTAGATGGTTGCTTTATATTGGAACTTTTCCTCAGGTATGACCAACACTTAAATATGAAGTTAGAAGACGAATCTGATCCGATATTCAATAGTGCTTGGATGATTGCAGCTCTTCGCCATGATCTGATATTACTTGAAAACCAGATCCCTTTCTTTATTCTCAAAAGTTTGTATGATGCTATGAAGTCTCATCTTAAGGGCACACCAAACTCTGTCACTAGCCTTGCTCTTAAGTTCTTTGAAATGAACCAAAAGTCAACAAAAGAAGAGCCTGACACAAAAAACCATCATTTGCTTCATCTTTTGCACAAATTCTACCTCCCAAATTTAGATTTCACAACAACAAATCACCAACTGAAACGCAGTGTTACAGAGATCCAACCTGGTCATATCTCAATCTCAGTCTCTGTTGAATTGACTTCTCACATTCAACATGTTTCTGCAATACATCTAACTTCAGGGATTCCTAGACCTGAACAAGCAGCTGCAACCAATATTAAAAGATGGGGATTCAATTTTAGCGCTTCAAACCTTTTATGGGCTGGGATTGAGTTTGAAAAAGGGTTGTCGGAGGACCATTTGTTAAACATAACTTTCGTCAAGGGAATAATCCGAATTCCACCAGTCGACATTCACTTGACATCAGATTCACTCTTTAGGAACTTGATCGCTTTTGAGCAATGCAGCCTTAGAAGTACGCATCATATTACGTCGTATTTGATCCTCATGAAGAGTCTCATTAGTTCCACACGGGATATAAAACTACTAAGGGAAAGAGGGATCATAAATCTATTAAATCACAATAGTGTTGGAGACCAAGAATATTTCACTGAATTCAAAACTATATTGGACATGGTTGTTGTGAAGGACTTCTGTTTTGGTAAGTTGTGTGACCAAGTGAATGCATACTGTAAGTCCTGGTTGCCATGGAGCAAACACAAGATAACGACTAGGGTGCGATTTAGGAGACATATAAACTTCCTTTACCGCACGTACTTCTCTAGTCCATGGAGTATCATATCATTTGTTGCTGCTGTGGCCCTTTTTGTTCTCACAGTCATACAGACATACTATAGCATTCACTCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

499

Amino Acids

57.85

Weight (kDa)

8.45

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 91
AccI GTMKAC 1 cut(s) 1032
AciI CCGC 2 cut(s) 61, 1393
AclWI GGATC 5 cut(s) 476, 544, 775, 1120, 1193
AcsI RAATTY 4 cut(s) 716, 730, 1020, 1238
AcuI CTGAAG 1 cut(s) 846
AfaI GTAC 3 cut(s) 310, 1102, 1400
AfeI AGCGCT 1 cut(s) 928
AfiI CCNNNNNNNGG 3 cut(s) 25, 91, 943
AflII CTTAAG 2 cut(s) 599, 635
AflIII ACRYGT 1 cut(s) 838
AgsI TTSAA 9 cut(s) 493, 542, 647, 818, 836, 919, 933, 962, 1243
AjnI CCWGG 2 cut(s) 787, 1322
AleI CACNNNNGTG 1 cut(s) 1209
AluBI AGCT 3 cut(s) 221, 515, 890
AluI AGCT 3 cut(s) 221, 515, 890
Alw26I GTCTC 7 cut(s) 184, 220, 597, 814, 1145, 1212, 1366
AlwI GGATC 5 cut(s) 476, 544, 775, 1120, 1193
AlwNI CAGNNNCTG 1 cut(s) 812
Aor51HI AGCGCT 1 cut(s) 928
AoxI GGCC 1 cut(s) 1443
ApeKI GCWGC 5 cut(s) 512, 887, 890, 1089, 1436
ApoI RAATTY 4 cut(s) 716, 730, 1020, 1238
ArsI GACNNNNNNTTYG 2 cut(s) 1265, 1297
Asp700I GAANNNNTTC 2 cut(s) 339, 1274
AspLEI GCGC 1 cut(s) 929
AspS9I GGNCC 3 cut(s) 188, 979, 1444
AsuHPI GGTGA 2 cut(s) 74, 746
AsuII TTCGAA 1 cut(s) 142
AsuNHI GCTAGC 1 cut(s) 388
AvaII GGWCC 2 cut(s) 188, 979
AxyI CCTNAGG 1 cut(s) 437
BaeGI GKGCMC 1 cut(s) 608
BauI CACGAG 1 cut(s) 171
BbsI GAAGAC 1 cut(s) 477
BbvI GCAGC 5 cut(s) 524, 877, 899, 1101, 1423
BccI CCATC 4 cut(s) 204, 404, 699, 903
BcgI CGANNNNNNTGC 2 cut(s) 1342, 1376
BciT130I CCWGG 2 cut(s) 789, 1324
BcoDI GTCTC 7 cut(s) 184, 220, 597, 814, 1145, 1212, 1366
BfaI CTAG 7 cut(s) 200, 389, 407, 624, 873, 1356, 1407
BfmI CTRYAG 1 cut(s) 1477
BfoI RGCGCY 1 cut(s) 930
BfrI CTTAAG 2 cut(s) 599, 635
BisI GCNGC 5 cut(s) 513, 888, 891, 1090, 1437
BlsI GCNGC 5 cut(s) 514, 889, 892, 1091, 1438
Bme1390I CCNGG 2 cut(s) 789, 1324
Bme18I GGWCC 2 cut(s) 188, 979
BmgT120I GGNCC 3 cut(s) 188, 979, 1444
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 2 cut(s) 789, 1324
BmsI GCATC 3 cut(s) 338, 571, 1114
BmtI GCTAGC 1 cut(s) 392
BpiI GAAGAC 1 cut(s) 477
Bpu14I TTCGAA 1 cut(s) 142
BpuEI CTTGAG 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 1398
BsaI GGTCTC 1 cut(s) 1212
BsaJI CCNNGG 2 cut(s) 1331, 1412
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 91, 943
Bse1I ACTGG 2 cut(s) 30, 1028
Bse21I CCTNAGG 1 cut(s) 437
Bse3DI GCAATG 1 cut(s) 1091
BseBI CCWGG 2 cut(s) 789, 1324
BseDI CCNNGG 2 cut(s) 1331, 1412
BseGI GGATG 4 cut(s) 15, 160, 353, 510
BseLI CCNNNNNNNGG 3 cut(s) 25, 91, 943
BseMI GCAATG 1 cut(s) 1091
BseMII CTCAG 2 cut(s) 451, 819
BseNI ACTGG 2 cut(s) 30, 1028
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 5 cut(s) 524, 877, 899, 1101, 1423
BseYI CCCAGC 1 cut(s) 947
BshFI GGCC 1 cut(s) 1445
BslI CCNNNNNNNGG 3 cut(s) 25, 91, 943
BsmAI GTCTC 7 cut(s) 184, 220, 597, 814, 1145, 1212, 1366
BsmI GAATGC 2 cut(s) 1312, 1482
BsnI GGCC 1 cut(s) 1445
Bso31I GGTCTC 1 cut(s) 1212
Bsp119I TTCGAA 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 608
Bsp143I GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
Bsp19I CCATGG 2 cut(s) 1331, 1412
BspACI CCGC 2 cut(s) 61, 1393
BspANI GGCC 1 cut(s) 1445
BspCNI CTCAG 2 cut(s) 450, 818
BspHI TCATGA 1 cut(s) 1131
BspLI GGNNCC 1 cut(s) 190
BspOI GCTAGC 1 cut(s) 392
BspPI GGATC 5 cut(s) 476, 544, 775, 1120, 1193
BspQI GCTCTTC 2 cut(s) 522, 666
BspT104I TTCGAA 1 cut(s) 142
BspTI CTTAAG 2 cut(s) 599, 635
BspTNI GGTCTC 1 cut(s) 1212
BsrDI GCAATG 1 cut(s) 1091
BsrI ACTGG 2 cut(s) 30, 1028
BssECI CCNNGG 2 cut(s) 1331, 1412
BssMI GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
BssSI CACGAG 1 cut(s) 171
BssT1I CCWWGG 2 cut(s) 1331, 1412
Bst2BI CACGAG 1 cut(s) 171
Bst2UI CCWGG 2 cut(s) 789, 1324
Bst4CI ACNGT 2 cut(s) 1316, 1462
Bst6I CTCTTC 3 cut(s) 522, 666, 1130
BstAFI CTTAAG 2 cut(s) 599, 635
BstAPI GCANNNNNTGC 1 cut(s) 247
BstBAI YACGTR 1 cut(s) 1398
BstBI TTCGAA 1 cut(s) 142
BstC8I GCNNGC 1 cut(s) 390
BstDEI CTNAG 4 cut(s) 437, 805, 1094, 1172
BstDSI CCRYGG 2 cut(s) 1331, 1412
BstF5I GGATG 4 cut(s) 15, 160, 353, 510
BstH2I RGCGCY 1 cut(s) 930
BstHHI GCGC 1 cut(s) 929
BstKTI GATC 8 cut(s) 277, 484, 529, 552, 783, 1074, 1128, 1188
BstMAI GTCTC 7 cut(s) 184, 220, 597, 814, 1145, 1212, 1366
BstMBI GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
BstMWI GCNNNNNNNGC 3 cut(s) 218, 247, 1442
BstNI CCWGG 2 cut(s) 789, 1324
BstNSI RCATGY 2 cut(s) 250, 842
BstSCI CCNGG 2 cut(s) 787, 1322
BstSFI CTRYAG 1 cut(s) 1477
BstSLI GKGCMC 1 cut(s) 608
BstV1I GCAGC 5 cut(s) 524, 877, 899, 1101, 1423
BstV2I GAAGAC 1 cut(s) 477
BstX2I RGATCY 2 cut(s) 549, 780
BstYI RGATCY 2 cut(s) 549, 780
Bsu36I CCTNAGG 1 cut(s) 437
BsuRI GGCC 1 cut(s) 1445
BtgI CCRYGG 2 cut(s) 1331, 1412
BtsCI GGATG 4 cut(s) 15, 160, 353, 510
BtsI GCAGTG 1 cut(s) 775
BtsIMutI CAGTG 2 cut(s) 775, 1233
Cac8I GCNNGC 1 cut(s) 390
CaiI CAGNNNCTG 1 cut(s) 812
CciI TCATGA 1 cut(s) 1131
CfoI GCGC 1 cut(s) 929
Cfr13I GGNCC 3 cut(s) 188, 979, 1444
CsiI ACCWGGT 1 cut(s) 787
Csp6I GTAC 3 cut(s) 309, 1101, 1399
CviAII CATG 9 cut(s) 209, 247, 400, 524, 839, 1132, 1258, 1332, 1413
CviJI RGCY 8 cut(s) 221, 515, 627, 676, 890, 947, 1092, 1445
CviKI_1 RGCY 8 cut(s) 221, 515, 627, 676, 890, 947, 1092, 1445
CviQI GTAC 3 cut(s) 309, 1101, 1399
DdeI CTNAG 4 cut(s) 437, 805, 1094, 1172
DpnI GATC 8 cut(s) 276, 483, 528, 551, 782, 1073, 1127, 1187
DpnII GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
Eam1104I CTCTTC 3 cut(s) 522, 666, 1130
EarI CTCTTC 3 cut(s) 522, 666, 1130
Eco130I CCWWGG 2 cut(s) 1331, 1412
Eco31I GGTCTC 1 cut(s) 1212
Eco47I GGWCC 2 cut(s) 188, 979
Eco47III AGCGCT 1 cut(s) 928
Eco57I CTGAAG 1 cut(s) 846
Eco81I CCTNAGG 1 cut(s) 437
EcoRI GAATTC 2 cut(s) 1020, 1238
EcoRII CCWGG 2 cut(s) 787, 1322
EcoT14I CCWWGG 2 cut(s) 1331, 1412
EcoT22I ATGCAT 1 cut(s) 1312
ErhI CCWWGG 2 cut(s) 1331, 1412
FaeI CATG 9 cut(s) 212, 250, 403, 527, 842, 1135, 1261, 1335, 1416
FatI CATG 9 cut(s) 208, 246, 399, 523, 838, 1131, 1257, 1331, 1412
FauI CCCGC 1 cut(s) 54
FblI GTMKAC 1 cut(s) 1032
Fnu4HI GCNGC 5 cut(s) 513, 888, 891, 1090, 1437
FokI GGATG 4 cut(s) 2, 167, 360, 517
Fsp4HI GCNGC 5 cut(s) 513, 888, 891, 1090, 1437
FspBI CTAG 7 cut(s) 200, 389, 407, 624, 873, 1356, 1407
GlaI GCGC 1 cut(s) 928
GluI GCNGC 5 cut(s) 513, 888, 891, 1090, 1437
GsaI CCCAGC 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 930
HaeIII GGCC 1 cut(s) 1445
HhaI GCGC 1 cut(s) 929
Hin1II CATG 9 cut(s) 212, 250, 403, 527, 842, 1135, 1261, 1335, 1416
Hin6I GCGC 1 cut(s) 927
HinP1I GCGC 1 cut(s) 927
HincII GTYRAC 2 cut(s) 663, 1033
HindII GTYRAC 2 cut(s) 663, 1033
HinfI GANTC 5 cut(s) 476, 868, 915, 1052, 1138
HphI GGTGA 2 cut(s) 74, 746
Hpy166II GTNNAC 3 cut(s) 309, 663, 1033
Hpy188I TCNGA 8 cut(s) 106, 358, 481, 486, 531, 976, 1019, 1051
Hpy188III TCNNGA 1 cut(s) 1132
Hpy8I GTNNAC 3 cut(s) 309, 663, 1033
Hpy99I CGWCG 1 cut(s) 1120
HpyAV CCTTC 3 cut(s) 149, 202, 1264
HpyCH4III ACNGT 2 cut(s) 1316, 1462
HpyCH4IV ACGT 2 cut(s) 1115, 1397
HpyCH4V TGCA 8 cut(s) 250, 263, 512, 712, 848, 893, 1089, 1310
HpyF10VI GCNNNNNNNGC 3 cut(s) 218, 247, 1442
HpyF3I CTNAG 4 cut(s) 437, 805, 1094, 1172
HpySE526I ACGT 2 cut(s) 1115, 1397
Hsp92II CATG 9 cut(s) 212, 250, 403, 527, 842, 1135, 1261, 1335, 1416
HspAI GCGC 1 cut(s) 927
Kzo9I GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
LguI GCTCTTC 2 cut(s) 522, 666
LmnI GCTCC 1 cut(s) 1335
Lsp1109I GCAGC 5 cut(s) 524, 877, 899, 1101, 1423
LweI GCATC 3 cut(s) 338, 571, 1114
MabI ACCWGGT 1 cut(s) 787
MaeI CTAG 7 cut(s) 200, 389, 407, 624, 873, 1356, 1407
MaeII ACGT 2 cut(s) 1115, 1397
MaeIII GTNAC 4 cut(s) 402, 619, 772, 1295
MalI GATC 8 cut(s) 276, 483, 528, 551, 782, 1073, 1127, 1187
MboI GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
MboII GAAGA 5 cut(s) 284, 482, 509, 683, 1147
MfeI CAATTG 1 cut(s) 183
MflI RGATCY 2 cut(s) 549, 780
MhlI GDGCHC 1 cut(s) 608
MluCI AATT 7 cut(s) 183, 716, 730, 818, 919, 1020, 1238
MlyI GAGTC 1 cut(s) 1147
MmeI TCCRAC 3 cut(s) 808, 954, 1195
MnlI CCTC 7 cut(s) 4, 299, 446, 734, 970, 1139, 1175
Mph1103I ATGCAT 1 cut(s) 1312
MroXI GAANNNNTTC 2 cut(s) 339, 1274
MseI TTAA 6 cut(s) 455, 600, 636, 903, 989, 1199
MslI CAYNNNNRTG 1 cut(s) 1209
MspA1I CMGCKG 1 cut(s) 890
MspCI CTTAAG 2 cut(s) 599, 635
MspR9I CCNGG 2 cut(s) 789, 1324
MunI CAATTG 1 cut(s) 183
Mva1269I GAATGC 2 cut(s) 1312, 1482
MvaI CCWGG 2 cut(s) 789, 1324
MwoI GCNNNNNNNGC 3 cut(s) 218, 247, 1442
NcoI CCATGG 2 cut(s) 1331, 1412
NdeII GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
NheI GCTAGC 1 cut(s) 388
NlaIII CATG 9 cut(s) 212, 250, 403, 527, 842, 1135, 1261, 1335, 1416
NlaIV GGNNCC 1 cut(s) 190
NmuCI GTSAC 2 cut(s) 619, 1295
NsiI ATGCAT 1 cut(s) 1312
NspI RCATGY 2 cut(s) 250, 842
NspV TTCGAA 1 cut(s) 142
OliI CACNNNNGTG 1 cut(s) 1209
PagI TCATGA 1 cut(s) 1131
PciI ACATGT 1 cut(s) 838
PciSI GCTCTTC 2 cut(s) 522, 666
PctI GAATGC 2 cut(s) 1312, 1482
PdmI GAANNNNTTC 2 cut(s) 339, 1274
PfeI GAWTC 4 cut(s) 476, 868, 915, 1052
PflMI CCANNNNNTGG 1 cut(s) 91
PkrI GCNGC 5 cut(s) 514, 889, 892, 1091, 1438
PleI GAGTC 1 cut(s) 1146
PpsI GAGTC 1 cut(s) 1146
Ppu21I YACGTR 1 cut(s) 1398
PscI ACATGT 1 cut(s) 838
PsiI TTATAA 1 cut(s) 123
Psp6I CCWGG 2 cut(s) 787, 1322
PspFI CCCAGC 1 cut(s) 947
PspGI CCWGG 2 cut(s) 787, 1322
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 3 cut(s) 188, 979, 1444
PstNI CAGNNNCTG 1 cut(s) 812
PsuI RGATCY 2 cut(s) 549, 780
PvuII CAGCTG 1 cut(s) 890
RsaI GTAC 3 cut(s) 310, 1102, 1400
RsaNI GTAC 3 cut(s) 309, 1101, 1399
RseI CAYNNNNRTG 1 cut(s) 1209
SalI GTCGAC 1 cut(s) 1031
SapI GCTCTTC 2 cut(s) 522, 666
SaqAI TTAA 6 cut(s) 455, 600, 636, 903, 989, 1199
SatI GCNGC 5 cut(s) 513, 888, 891, 1090, 1437
Sau3AI GATC 8 cut(s) 274, 481, 526, 549, 780, 1071, 1125, 1185
Sau96I GGNCC 3 cut(s) 188, 979, 1444
SchI GAGTC 1 cut(s) 1147
ScrFI CCNGG 2 cut(s) 789, 1324
SduI GDGCHC 1 cut(s) 608
SexAI ACCWGGT 1 cut(s) 787
SfaNI GCATC 3 cut(s) 338, 571, 1114
SfcI CTRYAG 1 cut(s) 1477
SfuI TTCGAA 1 cut(s) 142
SinI GGWCC 2 cut(s) 188, 979
SmiMI CAYNNNNRTG 1 cut(s) 1209
SmlI CTYRAG 3 cut(s) 112, 599, 635
SmoI CTYRAG 3 cut(s) 112, 599, 635
Sse9I AATT 7 cut(s) 183, 716, 730, 818, 919, 1020, 1238
SsiI CCGC 2 cut(s) 61, 1393
SspI AATATT 3 cut(s) 254, 901, 1229
SspMI CTAG 7 cut(s) 200, 389, 407, 624, 873, 1356, 1407
StyD4I CCNGG 2 cut(s) 787, 1322
StyI CCWWGG 2 cut(s) 1331, 1412
TaaI ACNGT 2 cut(s) 1316, 1462
TaiI ACGT 2 cut(s) 1118, 1400
TaqI TCGA 2 cut(s) 142, 1032
TasI AATT 7 cut(s) 183, 716, 730, 818, 919, 1020, 1238
TfiI GAWTC 4 cut(s) 476, 868, 915, 1052
Tru1I TTAA 6 cut(s) 455, 600, 636, 903, 989, 1199
Tru9I TTAA 6 cut(s) 455, 600, 636, 903, 989, 1199
TscAI CASTG 2 cut(s) 775, 1240
TseFI GTSAC 2 cut(s) 619, 1295
TseI GCWGC 5 cut(s) 512, 887, 890, 1089, 1436
Tsp45I GTSAC 2 cut(s) 619, 1295
TspDTI ATGAA 7 cut(s) 171, 348, 476, 602, 665, 692, 1148
TspRI CASTG 2 cut(s) 775, 1240
Van91I CCANNNNNTGG 1 cut(s) 91
Vha464I CTTAAG 2 cut(s) 599, 635
VpaK11BI GGWCC 2 cut(s) 188, 979
XapI RAATTY 4 cut(s) 716, 730, 1020, 1238
XceI RCATGY 2 cut(s) 250, 842
XmiI GTMKAC 1 cut(s) 1032
XmnI GAANNNNTTC 2 cut(s) 339, 1274
XspI CTAG 7 cut(s) 200, 389, 407, 624, 873, 1356, 1407
Zsp2I ATGCAT 1 cut(s) 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.