Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005911

Physical Location & Seq

Genomic Coordinates Forward (+)

26739690 .. 26741879

Gene Structure 2190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G289400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGGCTCCTACCATGCAGGCTCATGCACTGCCACAAAAATTAAAATCTCATTTTCATTATTCTTGCTTCTTGTTGGAGTAGCTTCAGCTCAATTGTCCCCTACTTTCTATTCAACATCTTGCCCCAACGCCCTGTCCACCATAAAATCAGCTGTGGCCTCAGCTGTGTCCAGCGAGGCTCGCATGGGAGCTTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCTTCGGTTCTGTTGGACGACACAGCCAGTTTGACAGGAGAGAAAACGGCAGGTCCCAATGCTAATTCTTTGAGGGGTTTTGATGTCATCGACACCATTAAAACCCAATTGGAGAGCCTTTGCCCCAAGGTGGTCTCTTGTGCTGACATCTTGACCGTTGCCGCCAGAGACTCTATTGTTGCATTGGGTGGACCGACCTACACAGTGCCATTAGGCAGAAGAGATGCAACCACCGCAAGCTTAAGTGCTGCCAATTCCAACATACCTGGTCCCCAATTGAACCTGGCTGCCCTCATTTCTGCTTTCTCAAACAAAGGCTTCACCGCCAGGGAAATGGTGGCTCTCTCAGGATCTCACACCATTGGCCAAGCTAGGTGCACAACATTTCGGAATAGACTTTATAACGAAGCCAACATAAACGCGTCATTTGCGACATCCGTGAAATCACAGTGTCCAAGCAGTGGAGGCGACAACACACTTTCCCCACTTGATGTCACAAGCCCAACCTCTTTCGACAACGCTTACTACAGGAACCTGGTGAGCCAGAAGGGTTTGTTGCACTCAGACCAGCAGCTCTATAGTGGTGGGTCCACCAACACCATAGTCGATGCTTACATCAGCAATACTGGGACTTTCAGGGCAGATTTTGCCAATGCTATGAAGAAGATGGGAAACCTTAGCCCTCTCACGGGCACCAATGGTCAGATTAGGACCAATTGTAGAAAGATTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

325

Amino Acids

33.97

Weight (kDa)

8.84

Isoelectric Point (pI)

29.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005911)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40081 FvH4_6g10250 FvH4_6g10250 FvH4_6g10250
malus_domestica	MD03G1058900.v1.1 MD04G1170900.v1.1 MD12G1184600.v1.1
prunus_persica	Prupe.6G044900_v2.0.a1 Prupe.6G289400_v2.0.a1 Prupe.6G289400_v2.0.a1
pyrus_communis	pycom04g15160 pycom12g17350
rosa_chinensis	RchiOBHm_Chr3g0461001 RchiOBHm_Chr5g0072281
rosa_laevigata	RLG00000024959 RLG00000036291
rosa_multiflora	Rmu_co8448951.1_g000001 Rmu_sc0006670.1_g000023 Rmu_sc0007017.1_g000015
rosa_roxburghii	Rroxscaffold_6G00418950
rosa_rugosa	Rorug03G0047700
rosa_samantha	Rh3AG105100 Rh3CG110400 Rh3DG110700 Rh5BG493600 Rh5CG517600
rosa_wichuraiana	Rw3G008990 Rw5G043980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	642
Acc36I	ACCTGC	1 cut(s)	281
AccB1I	GGYRCC	1 cut(s)	932
AccB7I	CCANNNNNTGG	1 cut(s)	701
AccII	CGCG	1 cut(s)	662
AciI	CCGC	3 cut(s)	402, 474, 564
AclWI	GGATC	1 cut(s)	598
AcoI	YGGCCR	1 cut(s)	604
AcuI	CTGAAG	1 cut(s)	69
AfiI	CCNNNNNNNGG	4 cut(s)	370, 701, 928, 929
AflII	CTTAAG	1 cut(s)	481
AflIII	ACRYGT	1 cut(s)	660
AgsI	TTSAA	2 cut(s)	114, 520
AjnI	CCWGG	4 cut(s)	505, 522, 566, 774
AluBI	AGCT	8 cut(s)	83, 89, 152, 164, 191, 480, 611, 814
AluI	AGCT	8 cut(s)	83, 89, 152, 164, 191, 480, 611, 814
Alw21I	GWGCWC	1 cut(s)	620
Alw26I	GTCTC	2 cut(s)	379, 402
Alw44I	GTGCAC	1 cut(s)	616
AlwI	GGATC	1 cut(s)	598
AoxI	GGCC	2 cut(s)	156, 604
ApaLI	GTGCAC	1 cut(s)	616
ApeKI	GCWGC	3 cut(s)	488, 527, 811
AspS9I	GGNCC	5 cut(s)	293, 431, 509, 828, 951
AsuHPI	GGTGA	2 cut(s)	553, 790
AvaII	GGWCC	5 cut(s)	293, 431, 509, 828, 951
BaeGI	GKGCMC	2 cut(s)	620, 935
BalI	TGGCCA	1 cut(s)	606
BanI	GGYRCC	1 cut(s)	932
BanII	GRGCYC	1 cut(s)	8
BbsI	GAAGAC	1 cut(s)	197
Bbv12I	GWGCWC	1 cut(s)	620
BbvCI	CCTCAGC	1 cut(s)	160
BbvI	GCAGC	3 cut(s)	475, 514, 823
BccI	CCATC	1 cut(s)	901
BceAI	ACGGC	1 cut(s)	303
BciT130I	CCWGG	4 cut(s)	507, 524, 568, 776
BcoDI	GTCTC	2 cut(s)	379, 402
BfaI	CTAG	2 cut(s)	612, 973
BfmI	CTRYAG	2 cut(s)	766, 817
BfrI	CTTAAG	1 cut(s)	481
BfuAI	ACCTGC	1 cut(s)	281
BisI	GCNGC	4 cut(s)	402, 489, 528, 812
BlsI	GCNGC	4 cut(s)	403, 490, 529, 813
Bme1390I	CCNGG	4 cut(s)	507, 524, 568, 776
Bme18I	GGWCC	5 cut(s)	293, 431, 509, 828, 951
BmgT120I	GGNCC	5 cut(s)	293, 431, 509, 828, 951
BmiI	GGNNCC	6 cut(s)	7, 295, 511, 773, 829, 934
BmrFI	CCNGG	4 cut(s)	507, 524, 568, 776
BmrI	ACTGGG	1 cut(s)	876
BmsI	GCATC	3 cut(s)	229, 454, 838
BmuI	ACTGGG	1 cut(s)	876
BpiI	GAAGAC	1 cut(s)	197
Bpu10I	CCTNAGC	2 cut(s)	160, 917
BsaI	GGTCTC	1 cut(s)	379
BsaJI	CCNNGG	2 cut(s)	366, 567
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 701, 928, 929
Bse1I	ACTGG	2 cut(s)	267, 871
BseBI	CCWGG	4 cut(s)	507, 524, 568, 776
BseDI	CCNNGG	2 cut(s)	366, 567
BseGI	GGATG	2 cut(s)	239, 674
BseLI	CCNNNNNNNGG	4 cut(s)	370, 701, 928, 929
BseMII	CTCAG	3 cut(s)	174, 600, 816
BseNI	ACTGG	2 cut(s)	267, 871
BseSI	GKGCMC	2 cut(s)	620, 935
BseXI	GCAGC	3 cut(s)	475, 514, 823
Bsh1236I	CGCG	1 cut(s)	662
BshFI	GGCC	2 cut(s)	158, 606
BshNI	GGYRCC	1 cut(s)	932
BsiHKAI	GWGCWC	1 cut(s)	620
BslFI	GGGAC	4 cut(s)	82, 279, 495, 883
BslI	CCNNNNNNNGG	4 cut(s)	370, 701, 928, 929
BsmAI	GTCTC	2 cut(s)	379, 402
BsmFI	GGGAC	4 cut(s)	82, 279, 495, 883
BsnI	GGCC	2 cut(s)	158, 606
Bso31I	GGTCTC	1 cut(s)	379
Bsp1286I	GDGCHC	3 cut(s)	8, 620, 935
Bsp143I	GATC	1 cut(s)	590
BspACI	CCGC	3 cut(s)	402, 474, 564
BspANI	GGCC	2 cut(s)	158, 606
BspCNI	CTCAG	3 cut(s)	173, 599, 815
BspFNI	CGCG	1 cut(s)	662
BspLI	GGNNCC	6 cut(s)	7, 295, 511, 773, 829, 934
BspMI	ACCTGC	1 cut(s)	281
BspPI	GGATC	1 cut(s)	598
BspT107I	GGYRCC	1 cut(s)	932
BspTI	CTTAAG	1 cut(s)	481
BspTNI	GGTCTC	1 cut(s)	379
BsrI	ACTGG	2 cut(s)	267, 871
BssECI	CCNNGG	2 cut(s)	366, 567
BssMI	GATC	1 cut(s)	590
BssT1I	CCWWGG	1 cut(s)	366
Bst2UI	CCWGG	4 cut(s)	507, 524, 568, 776
Bst4CI	ACNGT	3 cut(s)	397, 445, 690
Bst6I	CTCTTC	1 cut(s)	454
BstAFI	CTTAAG	1 cut(s)	481
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstC8I	GCNNGC	3 cut(s)	19, 181, 478
BstDEI	CTNAG	4 cut(s)	160, 586, 802, 917
BstF5I	GGATG	2 cut(s)	239, 674
BstFNI	CGCG	1 cut(s)	662
BstKTI	GATC	1 cut(s)	593
BstMAI	GTCTC	2 cut(s)	379, 402
BstMBI	GATC	1 cut(s)	590
BstMWI	GCNNNNNNNGC	5 cut(s)	180, 473, 668, 705, 887
BstNI	CCWGG	4 cut(s)	507, 524, 568, 776
BstSCI	CCNGG	4 cut(s)	505, 522, 566, 774
BstSFI	CTRYAG	2 cut(s)	766, 817
BstSLI	GKGCMC	2 cut(s)	620, 935
BstUI	CGCG	1 cut(s)	662
BstV1I	GCAGC	3 cut(s)	475, 514, 823
BstV2I	GAAGAC	1 cut(s)	197
BstX2I	RGATCY	1 cut(s)	590
BstXI	CCANNNNNNTGG	1 cut(s)	574
BstYI	RGATCY	1 cut(s)	590
BsuRI	GGCC	2 cut(s)	158, 606
BtsCI	GGATG	2 cut(s)	239, 674
BtsI	GCAGTG	2 cut(s)	27, 706
BtsIMutI	CAGTG	4 cut(s)	27, 450, 695, 706
BveI	ACCTGC	1 cut(s)	281
Cac8I	GCNNGC	3 cut(s)	19, 181, 478
Cfr13I	GGNCC	5 cut(s)	293, 431, 509, 828, 951
CseI	GACGC	1 cut(s)	651
CsiI	ACCWGGT	2 cut(s)	505, 774
CviAII	CATG	4 cut(s)	14, 24, 184, 215
DdeI	CTNAG	4 cut(s)	160, 586, 802, 917
DpnI	GATC	1 cut(s)	592
DpnII	GATC	1 cut(s)	590
EaeI	YGGCCR	1 cut(s)	604
Eam1104I	CTCTTC	1 cut(s)	454
EarI	CTCTTC	1 cut(s)	454
Eco130I	CCWWGG	1 cut(s)	366
Eco24I	GRGCYC	1 cut(s)	8
Eco31I	GGTCTC	1 cut(s)	379
Eco47I	GGWCC	5 cut(s)	293, 431, 509, 828, 951
Eco57I	CTGAAG	1 cut(s)	69
EcoO109I	RGGNCCY	1 cut(s)	293
EcoRII	CCWGG	4 cut(s)	505, 522, 566, 774
EcoT14I	CCWWGG	1 cut(s)	366
EcoT38I	GRGCYC	1 cut(s)	8
ErhI	CCWWGG	1 cut(s)	366
FaeI	CATG	4 cut(s)	17, 27, 187, 218
FaqI	GGGAC	4 cut(s)	82, 279, 495, 883
FatI	CATG	4 cut(s)	13, 23, 183, 214
Fnu4HI	GCNGC	4 cut(s)	402, 489, 528, 812
FokI	GGATG	2 cut(s)	246, 661
FriOI	GRGCYC	1 cut(s)	8
Fsp4HI	GCNGC	4 cut(s)	402, 489, 528, 812
FspBI	CTAG	2 cut(s)	612, 973
GluI	GCNGC	4 cut(s)	402, 489, 528, 812
HaeIII	GGCC	2 cut(s)	158, 606
HgaI	GACGC	1 cut(s)	651
Hin1II	CATG	4 cut(s)	17, 27, 187, 218
HindIII	AAGCTT	1 cut(s)	478
HinfI	GANTC	1 cut(s)	410
HphI	GGTGA	2 cut(s)	553, 790
Hpy166II	GTNNAC	4 cut(s)	138, 431, 618, 831
Hpy188I	TCNGA	3 cut(s)	630, 805, 945
Hpy188III	TCNNGA	2 cut(s)	391, 588
Hpy8I	GTNNAC	4 cut(s)	138, 431, 618, 831
HpyAV	CCTTC	1 cut(s)	781
HpyCH4III	ACNGT	3 cut(s)	397, 445, 690
HpyCH4V	TGCA	6 cut(s)	17, 27, 422, 467, 618, 799
HpyF10VI	GCNNNNNNNGC	5 cut(s)	180, 473, 668, 705, 887
HpyF3I	CTNAG	4 cut(s)	160, 586, 802, 917
Hsp92II	CATG	4 cut(s)	17, 27, 187, 218
Kzo9I	GATC	1 cut(s)	590
LmnI	GCTCC	3 cut(s)	11, 188, 204
Lsp1109I	GCAGC	3 cut(s)	475, 514, 823
LweI	GCATC	3 cut(s)	229, 454, 838
MabI	ACCWGGT	2 cut(s)	505, 774
MaeI	CTAG	2 cut(s)	612, 973
MaeIII	GTNAC	1 cut(s)	733
MalI	GATC	1 cut(s)	592
MboI	GATC	1 cut(s)	590
MboII	GAAGA	4 cut(s)	197, 471, 913, 916
MfeI	CAATTG	4 cut(s)	92, 347, 515, 955
MflI	RGATCY	1 cut(s)	590
MhlI	GDGCHC	3 cut(s)	8, 620, 935
MlsI	TGGCCA	1 cut(s)	606
MluCI	AATT	7 cut(s)	39, 92, 304, 347, 493, 515, 955
MluI	ACGCGT	1 cut(s)	660
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	1 cut(s)	404
MmeI	TCCRAC	3 cut(s)	55, 234, 522
MnlI	CCTC	7 cut(s)	169, 169, 306, 542, 698, 757, 933
Mox20I	TGGCCA	1 cut(s)	606
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	5 cut(s)	42, 228, 339, 482, 969
MslI	CAYNNNNRTG	1 cut(s)	213
Msp20I	TGGCCA	1 cut(s)	606
MspA1I	CMGCKG	2 cut(s)	152, 164
MspCI	CTTAAG	1 cut(s)	481
MspR9I	CCNGG	4 cut(s)	507, 524, 568, 776
MunI	CAATTG	4 cut(s)	92, 347, 515, 955
MvaI	CCWGG	4 cut(s)	507, 524, 568, 776
MvnI	CGCG	1 cut(s)	662
MwoI	GCNNNNNNNGC	5 cut(s)	180, 473, 668, 705, 887
NdeII	GATC	1 cut(s)	590
NlaIII	CATG	4 cut(s)	17, 27, 187, 218
NlaIV	GGNNCC	6 cut(s)	7, 295, 511, 773, 829, 934
NmuCI	GTSAC	1 cut(s)	733
PflMI	CCANNNNNTGG	1 cut(s)	701
PkrI	GCNGC	4 cut(s)	403, 490, 529, 813
PleI	GAGTC	1 cut(s)	404
PpsI	GAGTC	1 cut(s)	404
PpuMI	RGGWCCY	1 cut(s)	293
PsiI	TTATAA	1 cut(s)	642
Psp5II	RGGWCCY	1 cut(s)	293
Psp6I	CCWGG	4 cut(s)	505, 522, 566, 774
PspGI	CCWGG	4 cut(s)	505, 522, 566, 774
PspN4I	GGNNCC	6 cut(s)	7, 295, 511, 773, 829, 934
PspPI	GGNCC	5 cut(s)	293, 431, 509, 828, 951
PspPPI	RGGWCCY	1 cut(s)	293
PsuI	RGATCY	1 cut(s)	590
PvuII	CAGCTG	2 cut(s)	152, 164
RseI	CAYNNNNRTG	1 cut(s)	213
SaqAI	TTAA	5 cut(s)	42, 228, 339, 482, 969
SatI	GCNGC	4 cut(s)	402, 489, 528, 812
Sau3AI	GATC	1 cut(s)	590
Sau96I	GGNCC	5 cut(s)	293, 431, 509, 828, 951
SchI	GAGTC	1 cut(s)	404
ScrFI	CCNGG	4 cut(s)	507, 524, 568, 776
SduI	GDGCHC	3 cut(s)	8, 620, 935
SexAI	ACCWGGT	2 cut(s)	505, 774
SfaNI	GCATC	3 cut(s)	229, 454, 838
SfcI	CTRYAG	2 cut(s)	766, 817
SinI	GGWCC	5 cut(s)	293, 431, 509, 828, 951
SmiMI	CAYNNNNRTG	1 cut(s)	213
SmlI	CTYRAG	1 cut(s)	481
SmoI	CTYRAG	1 cut(s)	481
Sse9I	AATT	7 cut(s)	39, 92, 304, 347, 493, 515, 955
SsiI	CCGC	3 cut(s)	402, 474, 564
SspMI	CTAG	2 cut(s)	612, 973
StyD4I	CCNGG	4 cut(s)	505, 522, 566, 774
StyI	CCWWGG	1 cut(s)	366
TaaI	ACNGT	3 cut(s)	397, 445, 690
TaqI	TCGA	3 cut(s)	330, 753, 846
TaqII	GACCGA	1 cut(s)	448
TasI	AATT	7 cut(s)	39, 92, 304, 347, 493, 515, 955
TauI	GCSGC	1 cut(s)	404
Tru1I	TTAA	5 cut(s)	42, 228, 339, 482, 969
Tru9I	TTAA	5 cut(s)	42, 228, 339, 482, 969
TscAI	CASTG	4 cut(s)	34, 450, 695, 706
TseFI	GTSAC	1 cut(s)	733
TseI	GCWGC	3 cut(s)	488, 527, 811
Tsp45I	GTSAC	1 cut(s)	733
TspDTI	ATGAA	3 cut(s)	45, 197, 914
TspGWI	ACGGA	2 cut(s)	191, 667
TspRI	CASTG	4 cut(s)	34, 450, 695, 706
Van91I	CCANNNNNTGG	1 cut(s)	701
Vha464I	CTTAAG	1 cut(s)	481
VneI	GTGCAC	1 cut(s)	616
VpaK11BI	GGWCC	5 cut(s)	293, 431, 509, 828, 951
XcmI	CCANNNNNNNNNTGG	1 cut(s)	574
XspI	CTAG	2 cut(s)	612, 973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.