Prupe.6G296600_v2.0.a1

acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0006132
Physical Location & Seq
Forward (+)
27102829 .. 27105699
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G296600.2

Sequence Viewer

Length: 777 bp
ATGAATATTAGAGCAATGGTGCAACGGACCCAGGAGGTGTTTGTACTTGTGTATCTGACCTTATTCTCCAAGGCAACTGGTTTCAAGCCCTACCCTAAGCCAAGCCTGCCACAAGTTGAGGGTGCTGCGTTTTGTTTGAGTTGGAGACTGGCTGTGGAGGCCGACAATGTGCGTGCATGGCGCACGGTGCCAACTCAGTGCCTTGGCTACATTGAAACCTACATGATCGGAGGGCAGTACGACCGGGACGTCGATTTCCTCGTTGGCCAGATTCTGAGTTATGTGAATGGCATAGCTCTTTCCGGTGATGGCATGGACGCTTGGATTTTGGACGTGGATGACACTTGCATCTCCAATGTCTTCTACTACAAGAGCAAGAGATACGGGTGTGATCCCTATGACCCATCTGGGTTCAAGGCATGGGCAATGACTGGAGGCTGTCCGGCAATTCCTGGTATGCTAGGACTGTTTAGCAAGCTGGTGAGTAGTGGGTTTAAGGTGTTCATGGTCACAGGAAGAGATGAAGAAACCCTTGGACAAGTCACTACCGAAAACCTGCATAATCAGGGATTTGTGGGTTATGAACGGCTGATTTTGAGGACTGCCGCTTACAAAGGGCAAGGTGCAGTTGCGTACAAATCAAGCATTCGAAAGCAATTGGCAGCAGAAGGTTACAAGATTTGGGGAAATGTAGGAGACCAGTGGAGTGATCTACAGGGAGATTTTGTGGGGAACCGCACCTTTAAGCTTCCAAACCCCATGTATTTTGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Acid_phosphat_B

Protein Analysis

259

Amino Acids

28.76

Weight (kDa)

7.54

Isoelectric Point (pI)

23.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AatII GACGTC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 564
AccB1I GGYRCC 1 cut(s) 187
AciI CCGC 2 cut(s) 606, 736
AclWI GGATC 1 cut(s) 386
AcoI YGGCCR 1 cut(s) 265
AcyI GRCGYC 1 cut(s) 249
AfaI GTAC 3 cut(s) 45, 239, 635
AgsI TTSAA 3 cut(s) 85, 215, 415
AjiI CACGTC 1 cut(s) 334
AjnI CCWGG 2 cut(s) 30, 451
AjuI GAANNNNNNNTTGG 2 cut(s) 516, 548
AluBI AGCT 3 cut(s) 296, 478, 748
AluI AGCT 3 cut(s) 296, 478, 748
Alw26I GTCTC 2 cut(s) 139, 690
AlwI GGATC 1 cut(s) 386
AlwNI CAGNNNCTG 1 cut(s) 274
AoxI GGCC 2 cut(s) 159, 265
ApeKI GCWGC 2 cut(s) 125, 662
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 1 cut(s) 27
AsuC2I CCSGG 1 cut(s) 245
AsuHPI GGTGA 2 cut(s) 317, 493
AsuII TTCGAA 1 cut(s) 649
AvaII GGWCC 1 cut(s) 27
BaeI ACNNNNGTAYC 4 cut(s) 35, 68, 373, 406
BalI TGGCCA 1 cut(s) 267
BanI GGYRCC 1 cut(s) 187
BbsI GAAGAC 1 cut(s) 352
BbvI GCAGC 2 cut(s) 112, 674
BccI CCATC 2 cut(s) 302, 412
BceAI ACGGC 1 cut(s) 602
BciT130I CCWGG 2 cut(s) 32, 453
BcnI CCSGG 1 cut(s) 245
BcoDI GTCTC 2 cut(s) 139, 690
BfaI CTAG 1 cut(s) 461
BfmI CTRYAG 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 564
BisI GCNGC 3 cut(s) 126, 606, 663
BlsI GCNGC 3 cut(s) 127, 607, 664
Bme1390I CCNGG 3 cut(s) 32, 245, 453
Bme18I GGWCC 1 cut(s) 27
BmgBI CACGTC 1 cut(s) 334
BmgT120I GGNCC 1 cut(s) 27
BmiI GGNNCC 3 cut(s) 29, 189, 734
BmrFI CCNGG 3 cut(s) 32, 245, 453
BmsI GCATC 1 cut(s) 357
BpiI GAAGAC 1 cut(s) 352
BpmI CTGGAG 1 cut(s) 453
Bpu10I CCTNAGC 1 cut(s) 96
Bpu14I TTCGAA 1 cut(s) 649
BpuMI CCSGG 1 cut(s) 245
BsaHI GRCGYC 1 cut(s) 249
BsaI GGTCTC 1 cut(s) 690
BsaJI CCNNGG 4 cut(s) 30, 69, 202, 532
BsaWI WCCGGW 1 cut(s) 302
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bse1I ACTGG 4 cut(s) 82, 153, 436, 700
Bse3DI GCAATG 2 cut(s) 21, 432
BseBI CCWGG 2 cut(s) 32, 453
BseDI CCNNGG 4 cut(s) 30, 69, 202, 532
BseGI GGATG 1 cut(s) 343
BseMI GCAATG 2 cut(s) 21, 432
BseMII CTCAG 2 cut(s) 209, 266
BseNI ACTGG 4 cut(s) 82, 153, 436, 700
BseXI GCAGC 2 cut(s) 112, 674
BsgI GTGCAG 1 cut(s) 645
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 2 cut(s) 161, 267
BshNI GGYRCC 1 cut(s) 187
BsiEI CGRYCG 1 cut(s) 244
BsiSI CCGG 3 cut(s) 244, 303, 443
BslFI GGGAC 1 cut(s) 260
BsmAI GTCTC 2 cut(s) 139, 690
BsmFI GGGAC 1 cut(s) 260
BsmI GAATGC 1 cut(s) 645
BsnI GGCC 2 cut(s) 161, 267
Bso31I GGTCTC 1 cut(s) 690
Bsp119I TTCGAA 1 cut(s) 649
Bsp143I GATC 3 cut(s) 225, 391, 709
BspACI CCGC 2 cut(s) 606, 736
BspANI GGCC 2 cut(s) 161, 267
BspCNI CTCAG 2 cut(s) 208, 267
BspLI GGNNCC 3 cut(s) 29, 189, 734
BspMI ACCTGC 1 cut(s) 564
BspPI GGATC 1 cut(s) 386
BspT104I TTCGAA 1 cut(s) 649
BspT107I GGYRCC 1 cut(s) 187
BspTNI GGTCTC 1 cut(s) 690
BsrDI GCAATG 2 cut(s) 21, 432
BsrI ACTGG 4 cut(s) 82, 153, 436, 700
BssECI CCNNGG 4 cut(s) 30, 69, 202, 532
BssMI GATC 3 cut(s) 225, 391, 709
BssNI GRCGYC 1 cut(s) 249
BssT1I CCWWGG 3 cut(s) 69, 202, 532
Bst2UI CCWGG 2 cut(s) 32, 453
Bst4CI ACNGT 2 cut(s) 187, 468
Bst6I CTCTTC 1 cut(s) 511
BstACI GRCGYC 1 cut(s) 249
BstBI TTCGAA 1 cut(s) 649
BstC8I GCNNGC 3 cut(s) 107, 174, 476
BstDEI CTNAG 3 cut(s) 96, 195, 275
BstF5I GGATG 1 cut(s) 343
BstHHI GCGC 1 cut(s) 183
BstKTI GATC 3 cut(s) 228, 394, 712
BstMAI GTCTC 2 cut(s) 139, 690
BstMBI GATC 3 cut(s) 225, 391, 709
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 4 cut(s) 106, 158, 178, 187
BstNI CCWGG 2 cut(s) 32, 453
BstSCI CCNGG 3 cut(s) 30, 243, 451
BstSFI CTRYAG 1 cut(s) 713
BstV1I GCAGC 2 cut(s) 112, 674
BstV2I GAAGAC 1 cut(s) 352
BsuRI GGCC 2 cut(s) 161, 267
BtrI CACGTC 1 cut(s) 334
BtsCI GGATG 1 cut(s) 343
BtsIMutI CAGTG 2 cut(s) 203, 707
BveI ACCTGC 1 cut(s) 564
Cac8I GCNNGC 3 cut(s) 107, 174, 476
CaiI CAGNNNCTG 1 cut(s) 274
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 27
CseI GACGC 1 cut(s) 326
Csp6I GTAC 3 cut(s) 44, 238, 634
CviAII CATG 6 cut(s) 177, 223, 313, 420, 505, 760
CviQI GTAC 3 cut(s) 44, 238, 634
DdeI CTNAG 3 cut(s) 96, 195, 275
DpnI GATC 3 cut(s) 227, 393, 711
DpnII GATC 3 cut(s) 225, 391, 709
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 511
EarI CTCTTC 1 cut(s) 511
Eco130I CCWWGG 3 cut(s) 69, 202, 532
Eco31I GGTCTC 1 cut(s) 690
Eco47I GGWCC 1 cut(s) 27
EcoRII CCWGG 2 cut(s) 30, 451
EcoT14I CCWWGG 3 cut(s) 69, 202, 532
ErhI CCWWGG 3 cut(s) 69, 202, 532
FaeI CATG 6 cut(s) 180, 226, 316, 423, 508, 763
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 1 cut(s) 260
FatI CATG 6 cut(s) 176, 222, 312, 419, 504, 759
Fnu4HI GCNGC 3 cut(s) 126, 606, 663
FokI GGATG 1 cut(s) 350
Fsp4HI GCNGC 3 cut(s) 126, 606, 663
FspBI CTAG 1 cut(s) 461
GlaI GCGC 1 cut(s) 182
GluI GCNGC 3 cut(s) 126, 606, 663
GsuI CTGGAG 1 cut(s) 453
HaeIII GGCC 2 cut(s) 161, 267
HapII CCGG 3 cut(s) 244, 303, 443
HgaI GACGC 1 cut(s) 326
HhaI GCGC 1 cut(s) 183
Hin1I GRCGYC 1 cut(s) 249
Hin1II CATG 6 cut(s) 180, 226, 316, 423, 508, 763
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 746
HinfI GANTC 1 cut(s) 271
HpaII CCGG 3 cut(s) 244, 303, 443
HphI GGTGA 2 cut(s) 317, 493
Hpy188I TCNGA 3 cut(s) 57, 230, 276
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 1 cut(s) 662
HpyCH4III ACNGT 2 cut(s) 187, 468
HpyCH4IV ACGT 2 cut(s) 249, 333
HpyCH4V TGCA 5 cut(s) 22, 176, 348, 559, 626
HpyF10VI GCNNNNNNNGC 4 cut(s) 106, 158, 178, 187
HpyF3I CTNAG 3 cut(s) 96, 195, 275
HpySE526I ACGT 2 cut(s) 249, 333
Hsp92I GRCGYC 1 cut(s) 249
Hsp92II CATG 6 cut(s) 180, 226, 316, 423, 508, 763
HspAI GCGC 1 cut(s) 181
Kzo9I GATC 3 cut(s) 225, 391, 709
Lsp1109I GCAGC 2 cut(s) 112, 674
LweI GCATC 1 cut(s) 357
MaeI CTAG 1 cut(s) 461
MaeII ACGT 2 cut(s) 249, 333
MaeIII GTNAC 3 cut(s) 508, 541, 671
MalI GATC 3 cut(s) 227, 393, 711
MboI GATC 3 cut(s) 225, 391, 709
MboII GAAGA 3 cut(s) 352, 528, 536
MfeI CAATTG 1 cut(s) 656
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 2 cut(s) 447, 656
MluNI TGGCCA 1 cut(s) 267
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 7 cut(s) 28, 112, 151, 224, 269, 428, 591
Mox20I TGGCCA 1 cut(s) 267
MscI TGGCCA 1 cut(s) 267
MseI TTAA 2 cut(s) 495, 744
Msp20I TGGCCA 1 cut(s) 267
MspI CCGG 3 cut(s) 244, 303, 443
MspR9I CCNGG 3 cut(s) 32, 245, 453
MunI CAATTG 1 cut(s) 656
Mva1269I GAATGC 1 cut(s) 645
MvaI CCWGG 2 cut(s) 32, 453
MwoI GCNNNNNNNGC 4 cut(s) 106, 158, 178, 187
NciI CCSGG 1 cut(s) 245
NdeII GATC 3 cut(s) 225, 391, 709
NlaIII CATG 6 cut(s) 180, 226, 316, 423, 508, 763
NlaIV GGNNCC 3 cut(s) 29, 189, 734
NmuCI GTSAC 2 cut(s) 508, 541
NspV TTCGAA 1 cut(s) 649
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 258
PctI GAATGC 1 cut(s) 645
PfeI GAWTC 1 cut(s) 271
PkrI GCNGC 3 cut(s) 127, 607, 664
Psp6I CCWGG 2 cut(s) 30, 451
PspGI CCWGG 2 cut(s) 30, 451
PspN4I GGNNCC 3 cut(s) 29, 189, 734
PspPI GGNCC 1 cut(s) 27
PstNI CAGNNNCTG 1 cut(s) 274
RsaI GTAC 3 cut(s) 45, 239, 635
RsaNI GTAC 3 cut(s) 44, 238, 634
SaqAI TTAA 2 cut(s) 495, 744
SatI GCNGC 3 cut(s) 126, 606, 663
Sau3AI GATC 3 cut(s) 225, 391, 709
Sau96I GGNCC 1 cut(s) 27
ScrFI CCNGG 3 cut(s) 32, 245, 453
SfaNI GCATC 1 cut(s) 357
SfcI CTRYAG 1 cut(s) 713
SfuI TTCGAA 1 cut(s) 649
SinI GGWCC 1 cut(s) 27
Sse9I AATT 2 cut(s) 447, 656
SsiI CCGC 2 cut(s) 606, 736
SspI AATATT 1 cut(s) 7
SspMI CTAG 1 cut(s) 461
StyD4I CCNGG 3 cut(s) 30, 243, 451
StyI CCWWGG 3 cut(s) 69, 202, 532
TaaI ACNGT 2 cut(s) 187, 468
TaiI ACGT 2 cut(s) 252, 336
TaqI TCGA 2 cut(s) 252, 649
TasI AATT 2 cut(s) 447, 656
TatI WGTACW 1 cut(s) 43
TauI GCSGC 1 cut(s) 608
TfiI GAWTC 1 cut(s) 271
Tru1I TTAA 2 cut(s) 495, 744
Tru9I TTAA 2 cut(s) 495, 744
TscAI CASTG 2 cut(s) 203, 707
TseFI GTSAC 2 cut(s) 508, 541
TseI GCWGC 2 cut(s) 125, 662
Tsp45I GTSAC 2 cut(s) 508, 541
TspDTI ATGAA 4 cut(s) 17, 493, 537, 597
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 2 cut(s) 203, 707
VpaK11BI GGWCC 1 cut(s) 27
XspI CTAG 1 cut(s) 461
ZraI GACGTC 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.