No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08035 AT1G08035 AT1G08035 AT2G28330 |
| fragaria_vesca | FvH4_6g09290 FvH4_6g09290 FvH4_6g09290 |
| malus_domestica | MD04G1179200.v1.1 |
| prunus_persica | Prupe.6G299000_v2.0.a1 |
| pyrus_communis | pycom04g15830 |
| rosa_chinensis | RchiOBHm_Chr3g0459671 |
| rosa_laevigata | RLG00000025068 |
| rosa_multiflora | Rmu_co8248847.1_g000001 Rmu_sc0000240.1_g000020 |
| rosa_roxburghii | Rroxscaffold_6G00420090 |
| rosa_rugosa | Rorug03G0037000 Rorug03G0037100 Rorug03G0037200 Rorug03G0037300 Rorug03G0037400 |
| rosa_samantha | Rh3AG095900 Rh3BG098400 Rh3BG098500 Rh3CG100400 Rh3DG099800 |
| rosa_wichuraiana | Rw0G013770 Rw0G017650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 379 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 332 |
| AciI | CCGC | 3 cut(s) | 215, 518, 632 |
| AclWI | GGATC | 1 cut(s) | 338 |
| AcsI | RAATTY | 1 cut(s) | 728 |
| AfaI | GTAC | 1 cut(s) | 410 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 332, 360, 361, 376 |
| AgsI | TTSAA | 4 cut(s) | 515, 527, 585, 728 |
| AjnI | CCWGG | 3 cut(s) | 317, 369, 661 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 689, 721 |
| AleI | CACNNNNGTG | 1 cut(s) | 385 |
| AluBI | AGCT | 4 cut(s) | 80, 433, 650, 724 |
| AluI | AGCT | 4 cut(s) | 80, 433, 650, 724 |
| Alw21I | GWGCWC | 1 cut(s) | 670 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AlwI | GGATC | 1 cut(s) | 338 |
| AoxI | GGCC | 2 cut(s) | 155, 677 |
| ApeKI | GCWGC | 2 cut(s) | 107, 312 |
| ApoI | RAATTY | 1 cut(s) | 728 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 633 |
| AspS9I | GGNCC | 2 cut(s) | 155, 678 |
| AsuC2I | CCSGG | 2 cut(s) | 357, 385 |
| AsuHPI | GGTGA | 3 cut(s) | 187, 256, 479 |
| AxyI | CCTNAGG | 1 cut(s) | 682 |
| BanI | GGYRCC | 1 cut(s) | 379 |
| Bbv12I | GWGCWC | 1 cut(s) | 670 |
| BbvI | GCAGC | 2 cut(s) | 94, 324 |
| BccI | CCATC | 5 cut(s) | 55, 124, 136, 299, 326 |
| BciT130I | CCWGG | 3 cut(s) | 319, 371, 663 |
| BciVI | GTATCC | 1 cut(s) | 559 |
| BcnI | CCSGG | 2 cut(s) | 357, 385 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfaI | CTAG | 2 cut(s) | 29, 81 |
| BfuI | GTATCC | 1 cut(s) | 559 |
| BisI | GCNGC | 2 cut(s) | 108, 313 |
| BlsI | GCNGC | 2 cut(s) | 109, 314 |
| Bme1390I | CCNGG | 5 cut(s) | 319, 357, 371, 385, 663 |
| BmgT120I | GGNCC | 2 cut(s) | 155, 678 |
| BmiI | GGNNCC | 2 cut(s) | 156, 381 |
| BmrFI | CCNGG | 5 cut(s) | 319, 357, 371, 385, 663 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpmI | CTGGAG | 1 cut(s) | 30 |
| BpuEI | CTTGAG | 1 cut(s) | 694 |
| BpuMI | CCSGG | 2 cut(s) | 357, 385 |
| BsaJI | CCNNGG | 3 cut(s) | 317, 355, 383 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 332, 360, 361, 376 |
| Bse1I | ACTGG | 1 cut(s) | 326 |
| Bse21I | CCTNAGG | 1 cut(s) | 682 |
| BseBI | CCWGG | 3 cut(s) | 319, 371, 663 |
| BseDI | CCNNGG | 3 cut(s) | 317, 355, 383 |
| BseGI | GGATG | 5 cut(s) | 109, 147, 286, 337, 370 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 332, 360, 361, 376 |
| BseMII | CTCAG | 5 cut(s) | 65, 102, 268, 552, 696 |
| BseNI | ACTGG | 1 cut(s) | 326 |
| BseXI | GCAGC | 2 cut(s) | 94, 324 |
| Bsh1285I | CGRYCG | 1 cut(s) | 361 |
| BshFI | GGCC | 2 cut(s) | 157, 679 |
| BshNI | GGYRCC | 1 cut(s) | 379 |
| BsiEI | CGRYCG | 1 cut(s) | 361 |
| BsiHKAI | GWGCWC | 1 cut(s) | 670 |
| BsiSI | CCGG | 2 cut(s) | 357, 385 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 332, 360, 361, 376 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsnI | GGCC | 2 cut(s) | 157, 679 |
| Bsp1286I | GDGCHC | 1 cut(s) | 670 |
| Bsp143I | GATC | 3 cut(s) | 31, 246, 343 |
| BspACI | CCGC | 3 cut(s) | 215, 518, 632 |
| BspANI | GGCC | 2 cut(s) | 157, 679 |
| BspCNI | CTCAG | 5 cut(s) | 64, 103, 267, 553, 695 |
| BspLI | GGNNCC | 2 cut(s) | 156, 381 |
| BspPI | GGATC | 1 cut(s) | 338 |
| BspT107I | GGYRCC | 1 cut(s) | 379 |
| BsrI | ACTGG | 1 cut(s) | 326 |
| BssECI | CCNNGG | 3 cut(s) | 317, 355, 383 |
| BssMI | GATC | 3 cut(s) | 31, 246, 343 |
| Bst2UI | CCWGG | 3 cut(s) | 319, 371, 663 |
| Bst4CI | ACNGT | 1 cut(s) | 237 |
| BstDEI | CTNAG | 5 cut(s) | 51, 111, 254, 561, 682 |
| BstF5I | GGATG | 5 cut(s) | 109, 147, 286, 337, 370 |
| BstKTI | GATC | 3 cut(s) | 34, 249, 346 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 3 cut(s) | 31, 246, 343 |
| BstMCI | CGRYCG | 1 cut(s) | 361 |
| BstNI | CCWGG | 3 cut(s) | 319, 371, 663 |
| BstSCI | CCNGG | 5 cut(s) | 317, 355, 369, 383, 661 |
| BstV1I | GCAGC | 2 cut(s) | 94, 324 |
| Bsu36I | CCTNAGG | 1 cut(s) | 682 |
| BsuI | GTATCC | 1 cut(s) | 559 |
| BsuRI | GGCC | 2 cut(s) | 157, 679 |
| BtsCI | GGATG | 5 cut(s) | 109, 147, 286, 337, 370 |
| BtsIMutI | CAGTG | 1 cut(s) | 333 |
| Cfr13I | GGNCC | 2 cut(s) | 155, 678 |
| Csp6I | GTAC | 1 cut(s) | 409 |
| CviJI | RGCY | 9 cut(s) | 80, 94, 146, 157, 315, 433, 650, 679, 724 |
| CviKI_1 | RGCY | 9 cut(s) | 80, 94, 146, 157, 315, 433, 650, 679, 724 |
| CviQI | GTAC | 1 cut(s) | 409 |
| DdeI | CTNAG | 5 cut(s) | 51, 111, 254, 561, 682 |
| DpnI | GATC | 3 cut(s) | 33, 248, 345 |
| DpnII | GATC | 3 cut(s) | 31, 246, 343 |
| DraI | TTTAAA | 1 cut(s) | 228 |
| EciI | GGCGGA | 1 cut(s) | 204 |
| Eco81I | CCTNAGG | 1 cut(s) | 682 |
| EcoO109I | RGGNCCY | 2 cut(s) | 155, 678 |
| EcoRI | GAATTC | 1 cut(s) | 728 |
| EcoRII | CCWGG | 3 cut(s) | 317, 369, 661 |
| FaiI | YATR | 2 cut(s) | 99, 209 |
| Fnu4HI | GCNGC | 2 cut(s) | 108, 313 |
| FokI | GGATG | 5 cut(s) | 116, 154, 293, 344, 377 |
| Fsp4HI | GCNGC | 2 cut(s) | 108, 313 |
| FspBI | CTAG | 2 cut(s) | 29, 81 |
| GluI | GCNGC | 2 cut(s) | 108, 313 |
| GsuI | CTGGAG | 1 cut(s) | 30 |
| HaeIII | GGCC | 2 cut(s) | 157, 679 |
| HapII | CCGG | 2 cut(s) | 357, 385 |
| HindIII | AAGCTT | 1 cut(s) | 722 |
| HinfI | GANTC | 4 cut(s) | 443, 488, 599, 653 |
| HpaII | CCGG | 2 cut(s) | 357, 385 |
| HphI | GGTGA | 3 cut(s) | 187, 256, 479 |
| Hpy188I | TCNGA | 7 cut(s) | 54, 463, 499, 553, 577, 604, 719 |
| Hpy188III | TCNNGA | 2 cut(s) | 9, 362 |
| HpyAV | CCTTC | 1 cut(s) | 458 |
| HpyCH4III | ACNGT | 1 cut(s) | 237 |
| HpyCH4V | TGCA | 2 cut(s) | 39, 612 |
| HpyF3I | CTNAG | 5 cut(s) | 51, 111, 254, 561, 682 |
| Kzo9I | GATC | 3 cut(s) | 31, 246, 343 |
| LmnI | GCTCC | 1 cut(s) | 673 |
| Lsp1109I | GCAGC | 2 cut(s) | 94, 324 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 2 cut(s) | 29, 81 |
| MalI | GATC | 3 cut(s) | 33, 248, 345 |
| MboI | GATC | 3 cut(s) | 31, 246, 343 |
| MhlI | GDGCHC | 1 cut(s) | 670 |
| MluCI | AATT | 5 cut(s) | 68, 125, 396, 436, 728 |
| MmeI | TCCRAC | 1 cut(s) | 285 |
| MnlI | CCTC | 7 cut(s) | 229, 263, 496, 556, 630, 669, 691 |
| MroXI | GAANNNNTTC | 1 cut(s) | 633 |
| MseI | TTAA | 3 cut(s) | 227, 435, 713 |
| MslI | CAYNNNNRTG | 2 cut(s) | 102, 385 |
| MspI | CCGG | 2 cut(s) | 357, 385 |
| MspR9I | CCNGG | 5 cut(s) | 319, 357, 371, 385, 663 |
| MvaI | CCWGG | 3 cut(s) | 319, 371, 663 |
| NciI | CCSGG | 2 cut(s) | 357, 385 |
| NdeII | GATC | 3 cut(s) | 31, 246, 343 |
| NlaIV | GGNNCC | 2 cut(s) | 156, 381 |
| OliI | CACNNNNGTG | 1 cut(s) | 385 |
| PdmI | GAANNNNTTC | 1 cut(s) | 633 |
| PfeI | GAWTC | 4 cut(s) | 443, 488, 599, 653 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 332 |
| PkrI | GCNGC | 2 cut(s) | 109, 314 |
| Psp6I | CCWGG | 3 cut(s) | 317, 369, 661 |
| PspGI | CCWGG | 3 cut(s) | 317, 369, 661 |
| PspN4I | GGNNCC | 2 cut(s) | 156, 381 |
| PspPI | GGNCC | 2 cut(s) | 155, 678 |
| RsaI | GTAC | 1 cut(s) | 410 |
| RsaNI | GTAC | 1 cut(s) | 409 |
| RseI | CAYNNNNRTG | 2 cut(s) | 102, 385 |
| SaqAI | TTAA | 3 cut(s) | 227, 435, 713 |
| SatI | GCNGC | 2 cut(s) | 108, 313 |
| Sau3AI | GATC | 3 cut(s) | 31, 246, 343 |
| Sau96I | GGNCC | 2 cut(s) | 155, 678 |
| ScrFI | CCNGG | 5 cut(s) | 319, 357, 371, 385, 663 |
| SduI | GDGCHC | 1 cut(s) | 670 |
| SetI | ASST | 8 cut(s) | 82, 372, 435, 469, 595, 622, 652, 726 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 102, 385 |
| SmlI | CTYRAG | 1 cut(s) | 673 |
| SmoI | CTYRAG | 1 cut(s) | 673 |
| Sse9I | AATT | 5 cut(s) | 68, 125, 396, 436, 728 |
| SsiI | CCGC | 3 cut(s) | 215, 518, 632 |
| SspMI | CTAG | 2 cut(s) | 29, 81 |
| StyD4I | CCNGG | 5 cut(s) | 317, 355, 369, 383, 661 |
| TaaI | ACNGT | 1 cut(s) | 237 |
| TasI | AATT | 5 cut(s) | 68, 125, 396, 436, 728 |
| TatI | WGTACW | 1 cut(s) | 408 |
| TfiI | GAWTC | 4 cut(s) | 443, 488, 599, 653 |
| Tru1I | TTAA | 3 cut(s) | 227, 435, 713 |
| Tru9I | TTAA | 3 cut(s) | 227, 435, 713 |
| TscAI | CASTG | 1 cut(s) | 333 |
| TseI | GCWGC | 2 cut(s) | 107, 312 |
| TspDTI | ATGAA | 4 cut(s) | 39, 86, 137, 196 |
| TspRI | CASTG | 1 cut(s) | 333 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 332 |
| XapI | RAATTY | 1 cut(s) | 728 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 325 |
| XmnI | GAANNNNTTC | 1 cut(s) | 633 |
| XspI | CTAG | 2 cut(s) | 29, 81 |