Prupe.6G309900_v2.0.a1

RNA polymerase-associated protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27820349 .. 27824039
3691 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G309900.1

Sequence Viewer

Length: 1929 bp
ATGGCAGACTTAGAAAATTTGCTCCTTGAGGCAGCAGGAAGAACCAATTCAGCTGGGAAAAAACGGCAGCGACTTCCACCTAGGAAGCAACGTGGAGGTTCCTATTCTGATGACGGAAGTGACTCCAGGGATGAAGACTCTGATTATGATCGTAGTTATGCAAGCAGGAAGCCCTCTCGAGTTCCTCTGAAGAAGAGGCTTGAACATGAAAGGAGCAGTGATGAAGAAAGCGATTATGGCGATGGTTCTGACCATGAGGGTGCAAACAGTGATGACTCTGATGTTGGCCCTGATCTATACAAGAATGAAGCTGACCGAAAATGGCTGGCAGAGTTGAGTGAACTTGAAAGAGAGATGATTTTGACAGATCGAGCAGAAAAGAAAGATGGTAAGGATTTTATGGAGAAATTGAGATCAAAGAGAGGCAATGCAAGATCTACCCAATCAAGGAAAGAGACTTCTCCTCTTCCATTGTCTCGCGGTGTACGCTCATCAGCTAGGACTGCTGACAAGTCAGCTGCTATGGACGATGCATTGAATCAATTACGAGCAAAACGTCTGAAGCAACAAGACTCAAAGGCTCACCATAAGTTGAGGGACGCATTAAGAGCAAGTGAAGGTAGCCAGGGTACTTCACCGATCAAGAGCAAGTGGAGTCTGAGTAACTCCAGTCAAATTGAGAATGCAAGTGGGTTACACAGTGAAGATGAAGCATCAAGTGCAGATGGTGAATTGCTTGACAGCGATGATGACGTGTCAGAGCCACCAACATTTCAGGAGATAAAGGAAATTACTATCCCAAGGTCAAAACTTGCAAAATGGTTTATGGAACCATTTTTTGAGGAGTTAATTGTGGGTTGCTTTGTTAGGGTTGGAATTGGGAGATCATCAAGTGGTCCTGTCTACAGGCTTTGCATGGTTCAGAATGTGGATGCCATGAATCCTGACCGGCAGTACAAGCTAGAGGGTAAAGTCACACATAAATATTTGAATTGTGTTTGGGGCAGTGAAAGTTCTGCTGCCAAGTGGCAGATGGCTATGGTCTCAGATTCTGCTCCCCAGGAGGAGGAGTTTAAACAGTGGTTTAAGGAAGTAGAGCGTACTGCTGGCCGAATGCCAAGCAAACAAGAGGTATTAGAAAAGAGGGAGATGCTTCAAAAATCGAATACATATGTTTACTCAGCAACCACTGTGAAGCAAATGCTGCAGGAGAAAAAGTATGCCTCATCAAGGCCAGTAAATATTGCAGTTGAGAAGGATAAATTGAGGAGGCAGTTGGAAATTGCAGAAAGTAAGGATGATGAGGTGGAAGTTGAGAAGATCAAGACAAGGCTCCAGGAATTGGAAGCATCCAGGCAAACCCAGGGGAAAGATACCAAGGCCTTTAGATTAGCTGAGATGAACAGGAAGAACAGGGTTGAGAATTTTAAAAATGCTTCAGGATTGAAACGAGTGAATATGAATCTGAAAGCTGGGGAGGCTGGTTATGATCCATTCTCAAGAAGATGGACTAGATCGAGAAATTACTATGTTGCAAGGCCTGGAGGAGGAGGTGATGAAGCTGCTGAGGCAACAGTCGGAACTGCAGGTGTAGCCAGTAACGAGGACAAAGCAACAGCAACAGGAAAGAGTGGCATGGAAGCAACAGAGGCAGCGCTGGAAGCTGCAGCTGGTGCAGGGAAGTTGGTTGATACAAGTGCTCCAGTGGACAAAGGGACAGAGTCAAATATGCTGCACAATTTCGACCTGCCAATCTCGTTGGCTCCACTTCAGAAGCTTGGTGGACCTCAGGGCGCTCAGATTGCATACATGACGAGGAAACAAAAGATAGAAGCAACAGTTGGGTGCCAAGTGCGGGACGACGGGAAGAAGCATGCTTCGACACTGTCTGTTAACGACTATATCAGAAGAAGAGGGCTTCTCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

643

Amino Acids

71.53

Weight (kDa)

8.48

Isoelectric Point (pI)

50.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1577
Acc36I ACCTGC 2 cut(s) 1577, 1755
AccB1I GGYRCC 1 cut(s) 1845
AccB7I CCANNNNNTGG 1 cut(s) 1342
AccI GTMKAC 1 cut(s) 903
AccII CGCG 1 cut(s) 480
AciI CCGC 2 cut(s) 480, 1855
AclWI GGATC 1 cut(s) 1484
AcoI YGGCCR 1 cut(s) 1108
AcsI RAATTY 2 cut(s) 16, 1423
AcuI CTGAAG 4 cut(s) 209, 581, 1422, 1754
AfaI GTAC 4 cut(s) 486, 631, 956, 1102
AfeI AGCGCT 1 cut(s) 1656
AfiI CCNNNNNNNGG 6 cut(s) 447, 1066, 1230, 1342, 1547, 1855
AflIII ACRYGT 1 cut(s) 753
AgsI TTSAA 6 cut(s) 203, 347, 538, 991, 1157, 1447
AjiI CACGTC 1 cut(s) 754
AjnI CCWGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
AjuI GAANNNNNNNTTGG 2 cut(s) 1824, 1856
Alw21I GWGCWC 1 cut(s) 1702
Alw26I GTCTC 3 cut(s) 449, 480, 1048
AlwI GGATC 1 cut(s) 1484
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 1 cut(s) 177
Aor51HI AGCGCT 1 cut(s) 1656
AoxI GGCC 5 cut(s) 286, 1108, 1232, 1380, 1538
ApoI RAATTY 2 cut(s) 16, 1423
Asp700I GAANNNNTTC 1 cut(s) 46
AspA2I CCTAGG 1 cut(s) 80
AspLEI GCGC 2 cut(s) 1657, 1796
AspS9I GGNCC 3 cut(s) 287, 896, 1784
AsuHPI GGTGA 4 cut(s) 575, 627, 740, 1565
AvaI CYCGRG 1 cut(s) 177
AvaII GGWCC 2 cut(s) 896, 1784
AvrII CCTAGG 1 cut(s) 80
AxyI CCTNAGG 1 cut(s) 1788
BanI GGYRCC 1 cut(s) 1845
BbsI GAAGAC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 1702
BbvCI CCTCAGC 1 cut(s) 1566
BccI CCATC 5 cut(s) 236, 380, 719, 1027, 1500
BceAI ACGGC 1 cut(s) 80
BciT130I CCWGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
BcoDI GTCTC 3 cut(s) 449, 480, 1048
BfaI CTAG 5 cut(s) 81, 498, 962, 1512, 1927
BfmI CTRYAG 4 cut(s) 904, 1205, 1584, 1665
BfoI RGCGCY 2 cut(s) 1658, 1797
BfuAI ACCTGC 2 cut(s) 1577, 1755
BglII AGATCT 1 cut(s) 434
BlnI CCTAGG 1 cut(s) 80
Bme1390I CCNGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
Bme18I GGWCC 2 cut(s) 896, 1784
BmeT110I CYCGRG 1 cut(s) 177
BmgBI CACGTC 1 cut(s) 754
BmgT120I GGNCC 3 cut(s) 287, 896, 1784
BmiI GGNNCC 5 cut(s) 100, 831, 1334, 1764, 1847
BmrFI CCNGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
BmsI GCATC 5 cut(s) 520, 722, 922, 1140, 1358
BpiI GAAGAC 1 cut(s) 141
BplI GAGNNNNNCTC 1 cut(s) 1905
BpmI CTGGAG 5 cut(s) 109, 652, 1319, 1563, 1686
Bpu10I CCTNAGC 1 cut(s) 1566
BpuEI CTTGAG 2 cut(s) 47, 1483
BsaBI GATNNNNATC 1 cut(s) 147
BsaI GGTCTC 1 cut(s) 1048
BsaJI CCNNGG 8 cut(s) 80, 126, 625, 800, 1059, 1362, 1363, 1377
BsaXI ACNNNNNCTCC 8 cut(s) 646, 676, 1055, 1085, 1202, 1232, 1684, 1714
Bsc4I CCNNNNNNNGG 6 cut(s) 447, 1066, 1230, 1342, 1547, 1855
Bse118I RCCGGY 1 cut(s) 948
Bse1I ACTGG 4 cut(s) 669, 1235, 1596, 1703
Bse21I CCTNAGG 1 cut(s) 1788
Bse3DI GCAATG 1 cut(s) 433
Bse8I GATNNNNATC 1 cut(s) 147
BseBI CCWGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
BseDI CCNNGG 8 cut(s) 80, 126, 625, 800, 1059, 1362, 1363, 1377
BseGI GGATG 4 cut(s) 136, 937, 1303, 1349
BseJI GATNNNNATC 1 cut(s) 147
BseLI CCNNNNNNNGG 6 cut(s) 447, 1066, 1230, 1342, 1547, 1855
BseMI GCAATG 1 cut(s) 433
BseMII CTCAG 7 cut(s) 650, 1059, 1194, 1386, 1557, 1802, 1811
BseNI ACTGG 4 cut(s) 669, 1235, 1596, 1703
BseRI GAGGAG 7 cut(s) 453, 857, 1079, 1082, 1282, 1560, 1563
BseYI CCCAGC 2 cut(s) 53, 1472
BsgI GTGCAG 3 cut(s) 741, 1695, 1718
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 5 cut(s) 288, 1110, 1234, 1382, 1540
BshNI GGYRCC 1 cut(s) 1845
BsiHKAI GWGCWC 1 cut(s) 1702
BsiHKCI CYCGRG 1 cut(s) 177
BsiSI CCGG 1 cut(s) 949
BslFI GGGAC 3 cut(s) 611, 1729, 1871
BslI CCNNNNNNNGG 6 cut(s) 447, 1066, 1230, 1342, 1547, 1855
BsmAI GTCTC 3 cut(s) 449, 480, 1048
BsmFI GGGAC 3 cut(s) 611, 1729, 1871
BsmI GAATGC 2 cut(s) 688, 1119
BsnI GGCC 5 cut(s) 288, 1110, 1234, 1382, 1540
Bso31I GGTCTC 1 cut(s) 1048
BsoBI CYCGRG 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 1702
BspACI CCGC 2 cut(s) 480, 1855
BspANI GGCC 5 cut(s) 288, 1110, 1234, 1382, 1540
BspCNI CTCAG 7 cut(s) 651, 1058, 1193, 1387, 1558, 1801, 1810
BspFNI CGCG 1 cut(s) 480
BspLI GGNNCC 5 cut(s) 100, 831, 1334, 1764, 1847
BspMAI CTGCAG 3 cut(s) 1209, 1588, 1669
BspMI ACCTGC 2 cut(s) 1577, 1755
BspPI GGATC 1 cut(s) 1484
BspT107I GGYRCC 1 cut(s) 1845
BspTNI GGTCTC 1 cut(s) 1048
BsrDI GCAATG 1 cut(s) 433
BsrFI RCCGGY 1 cut(s) 948
BsrI ACTGG 4 cut(s) 669, 1235, 1596, 1703
BssAI RCCGGY 1 cut(s) 948
BssECI CCNNGG 8 cut(s) 80, 126, 625, 800, 1059, 1362, 1363, 1377
BssT1I CCWWGG 3 cut(s) 80, 800, 1377
Bst2UI CCWGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
Bst4CI ACNGT 7 cut(s) 269, 701, 1080, 1192, 1576, 1840, 1887
Bst6I CTCTTC 3 cut(s) 188, 471, 1906
BstAPI GCANNNNNTGC 3 cut(s) 719, 1204, 1673
BstC8I GCNNGC 4 cut(s) 163, 327, 1108, 1875
BstDEI CTNAG 8 cut(s) 10, 659, 1045, 1180, 1395, 1566, 1788, 1797
BstENI CCTNNNNNAGG 2 cut(s) 1228, 1545
BstF5I GGATG 4 cut(s) 136, 937, 1303, 1349
BstFNI CGCG 1 cut(s) 480
BstH2I RGCGCY 2 cut(s) 1658, 1797
BstHHI GCGC 2 cut(s) 1657, 1796
BstMAI GTCTC 3 cut(s) 449, 480, 1048
BstNI CCWGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
BstNSI RCATGY 1 cut(s) 1877
BstSCI CCNGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
BstSFI CTRYAG 4 cut(s) 904, 1205, 1584, 1665
BstUI CGCG 1 cut(s) 480
BstV2I GAAGAC 1 cut(s) 141
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
Bsu36I CCTNAGG 1 cut(s) 1788
BsuRI GGCC 5 cut(s) 288, 1110, 1234, 1382, 1540
BtgZI GCGATG 2 cut(s) 255, 759
BtrI CACGTC 1 cut(s) 754
BtsCI GGATG 4 cut(s) 136, 937, 1303, 1349
BtsI GCAGTG 2 cut(s) 223, 1012
BtsIMutI CAGTG 8 cut(s) 223, 274, 706, 1012, 1085, 1188, 1710, 1883
BveI ACCTGC 2 cut(s) 1577, 1755
Cac8I GCNNGC 4 cut(s) 163, 327, 1108, 1875
CaiI CAGNNNCTG 1 cut(s) 1052
CfoI GCGC 2 cut(s) 1657, 1796
Cfr10I RCCGGY 1 cut(s) 948
Cfr13I GGNCC 3 cut(s) 287, 896, 1784
CseI GACGC 1 cut(s) 608
Csp6I GTAC 4 cut(s) 485, 630, 955, 1101
CviAII CATG 7 cut(s) 206, 254, 916, 937, 1636, 1810, 1874
CviQI GTAC 4 cut(s) 485, 630, 955, 1101
DdeI CTNAG 8 cut(s) 10, 659, 1045, 1180, 1395, 1566, 1788, 1797
DraI TTTAAA 2 cut(s) 1075, 1429
EaeI YGGCCR 1 cut(s) 1108
Eam1104I CTCTTC 3 cut(s) 188, 471, 1906
EarI CTCTTC 3 cut(s) 188, 471, 1906
Eco130I CCWWGG 3 cut(s) 80, 800, 1377
Eco147I AGGCCT 2 cut(s) 1382, 1540
Eco31I GGTCTC 1 cut(s) 1048
Eco47I GGWCC 2 cut(s) 896, 1784
Eco47III AGCGCT 1 cut(s) 1656
Eco57I CTGAAG 4 cut(s) 209, 581, 1422, 1754
Eco81I CCTNAGG 1 cut(s) 1788
Eco88I CYCGRG 1 cut(s) 177
EcoNI CCTNNNNNAGG 2 cut(s) 1228, 1545
EcoRII CCWGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
EcoT14I CCWWGG 3 cut(s) 80, 800, 1377
EcoT22I ATGCAT 1 cut(s) 535
ErhI CCWWGG 3 cut(s) 80, 800, 1377
FaeI CATG 7 cut(s) 209, 257, 919, 940, 1639, 1813, 1877
FaqI GGGAC 3 cut(s) 611, 1729, 1871
FatI CATG 7 cut(s) 205, 253, 915, 936, 1635, 1809, 1873
FauI CCCGC 1 cut(s) 1848
FauNDI CATATG 1 cut(s) 1171
FblI GTMKAC 1 cut(s) 903
FokI GGATG 4 cut(s) 143, 944, 1310, 1336
FspBI CTAG 5 cut(s) 81, 498, 962, 1512, 1927
GlaI GCGC 2 cut(s) 1656, 1795
GsaI CCCAGC 2 cut(s) 57, 1476
GsuI CTGGAG 5 cut(s) 109, 652, 1319, 1563, 1686
HaeII RGCGCY 2 cut(s) 1658, 1797
HaeIII GGCC 5 cut(s) 288, 1110, 1234, 1382, 1540
HapII CCGG 1 cut(s) 949
HgaI GACGC 1 cut(s) 608
HhaI GCGC 2 cut(s) 1657, 1796
Hin1II CATG 7 cut(s) 209, 257, 919, 940, 1639, 1813, 1877
Hin6I GCGC 2 cut(s) 1655, 1794
HinP1I GCGC 2 cut(s) 1655, 1794
HincII GTYRAC 1 cut(s) 1894
HindII GTYRAC 1 cut(s) 1894
HindIII AAGCTT 1 cut(s) 1775
HpaI GTTAAC 1 cut(s) 1894
HpaII CCGG 1 cut(s) 949
HphI GGTGA 4 cut(s) 575, 627, 740, 1565
Hpy166II GTNNAC 7 cut(s) 341, 485, 904, 1177, 1708, 1784, 1894
Hpy188III TCNNGA 8 cut(s) 177, 643, 776, 944, 1324, 1440, 1500, 1518
Hpy8I GTNNAC 7 cut(s) 341, 485, 904, 1177, 1708, 1784, 1894
Hpy99I CGWCG 1 cut(s) 1865
HpyAV CCTTC 2 cut(s) 611, 1249
HpyCH4III ACNGT 7 cut(s) 269, 701, 1080, 1192, 1576, 1840, 1887
HpyCH4IV ACGT 3 cut(s) 91, 556, 753
HpyF3I CTNAG 8 cut(s) 10, 659, 1045, 1180, 1395, 1566, 1788, 1797
HpySE526I ACGT 3 cut(s) 91, 556, 753
Hsp92II CATG 7 cut(s) 209, 257, 919, 940, 1639, 1813, 1877
HspAI GCGC 2 cut(s) 1655, 1794
KspAI GTTAAC 1 cut(s) 1894
LmnI GCTCC 6 cut(s) 27, 213, 1060, 1338, 1705, 1768
LweI GCATC 5 cut(s) 520, 722, 922, 1140, 1358
MaeI CTAG 5 cut(s) 81, 498, 962, 1512, 1927
MaeII ACGT 3 cut(s) 91, 556, 753
MaeIII GTNAC 5 cut(s) 119, 662, 693, 973, 1598
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 1 cut(s) 1702
MlyI GAGTC 6 cut(s) 116, 131, 269, 566, 664, 1730
MmeI TCCRAC 3 cut(s) 853, 1257, 1558
Mph1103I ATGCAT 1 cut(s) 535
MroXI GAANNNNTTC 1 cut(s) 46
MseI TTAA 6 cut(s) 605, 848, 1074, 1086, 1428, 1893
MslI CAYNNNNRTG 1 cut(s) 258
MspA1I CMGCKG 3 cut(s) 53, 518, 1670
MspI CCGG 1 cut(s) 949
MspR9I CCNGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
MssI GTTTAAAC 1 cut(s) 1075
Mva1269I GAATGC 2 cut(s) 688, 1119
MvaI CCWGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
MvnI CGCG 1 cut(s) 480
NdeI CATATG 1 cut(s) 1171
NlaIII CATG 7 cut(s) 209, 257, 919, 940, 1639, 1813, 1877
NlaIV GGNNCC 5 cut(s) 100, 831, 1334, 1764, 1847
NmuCI GTSAC 2 cut(s) 119, 973
NsiI ATGCAT 1 cut(s) 535
NspI RCATGY 1 cut(s) 1877
PaeI GCATGC 1 cut(s) 1877
PaeR7I CTCGAG 1 cut(s) 177
PaqCI CACCTGC 1 cut(s) 1577
PasI CCCWGGG 1 cut(s) 1363
PceI AGGCCT 2 cut(s) 1382, 1540
PcsI WCGNNNNNNNCGW 1 cut(s) 553
PctI GAATGC 2 cut(s) 688, 1119
PdmI GAANNNNTTC 1 cut(s) 46
PfeI GAWTC 4 cut(s) 538, 940, 1049, 1462
PflFI GACNNNGTC 2 cut(s) 1720, 1885
PflMI CCANNNNNTGG 1 cut(s) 1342
PfoI TCCNGGA 1 cut(s) 1335
PleI GAGTC 6 cut(s) 116, 131, 269, 566, 663, 1729
PmeI GTTTAAAC 1 cut(s) 1075
PpsI GAGTC 6 cut(s) 116, 131, 269, 566, 663, 1729
Psp6I CCWGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
PspFI CCCAGC 2 cut(s) 53, 1472
PspGI CCWGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
PspN4I GGNNCC 5 cut(s) 100, 831, 1334, 1764, 1847
PspPI GGNCC 3 cut(s) 287, 896, 1784
PstI CTGCAG 3 cut(s) 1209, 1588, 1669
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 1 cut(s) 434
PsyI GACNNNGTC 2 cut(s) 1720, 1885
PvuII CAGCTG 3 cut(s) 53, 518, 1670
RsaI GTAC 4 cut(s) 486, 631, 956, 1102
RsaNI GTAC 4 cut(s) 485, 630, 955, 1101
RseI CAYNNNNRTG 1 cut(s) 258
SaqAI TTAA 6 cut(s) 605, 848, 1074, 1086, 1428, 1893
Sau96I GGNCC 3 cut(s) 287, 896, 1784
SchI GAGTC 6 cut(s) 116, 131, 269, 566, 664, 1730
ScrFI CCNGG 7 cut(s) 127, 626, 1061, 1337, 1354, 1364, 1542
SduI GDGCHC 1 cut(s) 1702
SfaNI GCATC 5 cut(s) 520, 722, 922, 1140, 1358
SfcI CTRYAG 4 cut(s) 904, 1205, 1584, 1665
Sfr274I CTCGAG 1 cut(s) 177
SinI GGWCC 2 cut(s) 896, 1784
SlaI CTCGAG 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 3 cut(s) 26, 177, 1498
SmoI CTYRAG 3 cut(s) 26, 177, 1498
SphI GCATGC 1 cut(s) 1877
SseBI AGGCCT 2 cut(s) 1382, 1540
SsiI CCGC 2 cut(s) 480, 1855
SspI AATATT 2 cut(s) 986, 1243
SspMI CTAG 5 cut(s) 81, 498, 962, 1512, 1927
StuI AGGCCT 2 cut(s) 1382, 1540
StyD4I CCNGG 7 cut(s) 125, 624, 1059, 1335, 1352, 1362, 1540
StyI CCWWGG 3 cut(s) 80, 800, 1377
TaaI ACNGT 7 cut(s) 269, 701, 1080, 1192, 1576, 1840, 1887
TaiI ACGT 3 cut(s) 94, 559, 756
TaqI TCGA 6 cut(s) 178, 370, 1163, 1517, 1743, 1880
TaqII GACCGA 1 cut(s) 330
TatI WGTACW 1 cut(s) 954
TfiI GAWTC 4 cut(s) 538, 940, 1049, 1462
Tru1I TTAA 6 cut(s) 605, 848, 1074, 1086, 1428, 1893
Tru9I TTAA 6 cut(s) 605, 848, 1074, 1086, 1428, 1893
TscAI CASTG 8 cut(s) 223, 274, 706, 1012, 1085, 1195, 1710, 1890
TseFI GTSAC 2 cut(s) 119, 973
Tsp45I GTSAC 2 cut(s) 119, 973
TspDTI ATGAA 9 cut(s) 147, 222, 237, 321, 723, 953, 1415, 1475, 1572
TspGWI ACGGA 1 cut(s) 129
TspRI CASTG 8 cut(s) 223, 274, 706, 1012, 1085, 1195, 1710, 1890
Tth111I GACNNNGTC 2 cut(s) 1720, 1885
Van91I CCANNNNNTGG 1 cut(s) 1342
VpaK11BI GGWCC 2 cut(s) 896, 1784
XagI CCTNNNNNAGG 2 cut(s) 1228, 1545
XapI RAATTY 2 cut(s) 16, 1423
XceI RCATGY 1 cut(s) 1877
XcmI CCANNNNNNNNNTGG 1 cut(s) 1030
XhoI CTCGAG 1 cut(s) 177
XmaJI CCTAGG 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 903
XmnI GAANNNNTTC 1 cut(s) 46
XspI CTAG 5 cut(s) 81, 498, 962, 1512, 1927
Zsp2I ATGCAT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.