Rroxscaffold_6G00421720

RNA polymerase-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0003596
Physical Location & Seq
Reverse (-)
42822065 .. 42825069
3005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00421720.1

Sequence Viewer

Length: 2022 bp
ATGAGTACTCAGTCTATACATTACTCCCTGTTTTGGAGAAGCATAACTGTAGCACAAGGCAGACAGCAGACCATGGCAGACTTGGAAAATTTGCTCCTTGAGGCAGCAGGACGAACCAGTGCAGCTGTGAAAAACCGGCACCAACTTCCACATTCTCGAAAGCGACATGGAGGTTCCTTCTCTGATGATGAAAGTGACTCTGGGGATGAAGACTCAGATGGTGGTCGTAGTTATGCAAGCAAGAAGCCCTCTCAAGTACCTCTCAAGAAGAGGTTTGACCCTGCTGAAAGAGGCAGTGACGAAGAGCACGTTGATGATTCTGATCATGAGAGCGAAAACAGTGATGAATCTGATATCGGCCCTGATCTCTACAAGGATGATGCTGATCGGAGACGGCTTTCAGAGTTGACTGAACTTGAAAGAGAGATGATCTTGACAAATAGAGCAGAAAAGAAAGATGGTAAGAAGTTTATGGAAAAATTAAGATCAAAGAGAGACAAAGAAAGATCTATCCAATCAAAGAAAGAAACTTCTTCTGTTCCATTGTCCCGTGGTGTACGCTCATCAGCTAGGACTGCTGAGAAATCAGCTGCTTTGGATGATGCATTGAGTCAGTTACGAGAAAAGCGTCTGAAGCAACAAGACTTGAAGGCTCGCTATAATCTGAGGGACTCATCAAAAGGAAGTGTAGGTAGCCAGGATATTTCACCAATCAAGCGTAAATCCCTTGTTGCACCAAGTCTGATTGACTCTGATCAAAATGAGAATGCTGAGGGGTTACAAACTGAAGAAGTAGCATCAGCTTGGGATGATGACTCGTTGGATAGCGATGAGGAAAGGTTAGAGCCGCCAACATATCAGGACATAAAGGACATTACCATTCCAAGGTCGAAACTTGCAAAATGGTGTATGGAACCATTTTTTGAGGAGTTAATTGTGGGTTGCTTTGTTAGGGTTGGATTTGGGAAATCATCAAGTGGTCCAGTCTACAGGCTTTGCATGATTCAGAATGTGGATGCCACTGATTTTAACCGGCGGTACCAGCTAGAGGGAAAAATGACACATAAATATTTGAACTGTGTTTGGGGCAGTGAAAATTCTGCTTCCAAGTGGCAGATGGCTATGGTCTCAAATTCTGCTCCGGAGGAGGAGGAGTTTAACGATTGGATTAGGGAAGTGAAGCGTAGTGCTGGCTACATGCCAAGCAAACAGGATGTATTAGAAAAGAGGGAGACCCTACAGAAATCCAACACATTTGTTTACTCAGCAACAACTGTGAAGCAAATGTTGCAGGAGAAAAAAGCCTCAGCAAGACCGGTGAACATTGCAGTTGAGAAGGATAGGTTGAGGAGGCAGTTGGAAGTTGCAGAAAGCAAGTGTGATGAGGAGGAAGTTGGGAGGATTAAGACAAGGCTCCTGGAATTGGAAGCATCCAGGCAATCCCAGGAGAAAGATTCCAAGGCTATTAGGTTAGCTGAGATGAACAGGAAGAACAGGTTTGAGAATTTTAAGAATGCTTCTGGATTGAAACCAATAAATACGAATCTGAAAGCTGGGGAGGCTGGTTATGATCCTTTCTCAAGAAGATGGACTAGATCGAGGAATTACTATGTTAGAAAGACGGGAGGAGGAGATGAAGCCGCTGAAGATGAAACTGCTGAGGCAGCAAATGGAACTCTAGGTACAACCGATAACAAGGCAGAAGCAAAAGTAATGGGAAAGTTTGGCATGACAGCAACAGCGGCAGCGTTGGAAGCTGCAGCAGGTGCAGGGAAGTTGGTTGATACAAGTGCTCCTGTGGACAGAGCGACAGAGTCATATACACTGCACAATTTCGAGCTGCCAATCTCGTTGGCTGCACTTCAGAAGTTTGGTGGACCTCATGGTGCTCCGGCTGCATACTTTGCGAGGAAACAAAAGATAGAAGCAACTGTAGGGTACCAAGTCCCGGAGGATGATGGCAGGAGACATGCTTTGACATTGACAGTTAGTGACTATAAGAGAAGAAGAGGGCTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Plus-3

Protein Analysis

673

Amino Acids

75.56

Weight (kDa)

6.85

Isoelectric Point (pI)

58.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Plus-3 PF03126 288 - 393 4.2e-31 Plus-3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1754
Acc36I ACCTGC 1 cut(s) 1754
Acc65I GGTACC 2 cut(s) 1038, 1938
AccB1I GGYRCC 3 cut(s) 138, 1038, 1938
AccI GTMKAC 1 cut(s) 987
AccIII TCCGGA 1 cut(s) 1141
AciI CCGC 4 cut(s) 848, 1036, 1641, 1742
AclWI GGATC 1 cut(s) 1565
AcsI RAATTY 4 cut(s) 88, 1096, 1132, 1504
AcuI CTGAAG 4 cut(s) 653, 807, 1665, 1847
AfaI GTAC 6 cut(s) 7, 258, 558, 1040, 1684, 1940
AfiI CCNNNNNNNGG 5 cut(s) 33, 885, 1048, 1423, 1948
AgeI ACCGGT 1 cut(s) 1315
AgsI TTSAA 4 cut(s) 419, 649, 1075, 1528
AjnI CCWGG 4 cut(s) 696, 1416, 1433, 1443
AluBI AGCT 9 cut(s) 125, 569, 590, 803, 1045, 1475, 1553, 1757, 1840
AluI AGCT 9 cut(s) 125, 569, 590, 803, 1045, 1475, 1553, 1757, 1840
Alw21I GWGCWC 3 cut(s) 309, 1795, 1891
Alw26I GTCTC 5 cut(s) 385, 489, 1132, 1226, 1960
AlwI GGATC 1 cut(s) 1565
Aor13HI TCCGGA 1 cut(s) 1141
AoxI GGCC 1 cut(s) 358
ApoI RAATTY 4 cut(s) 88, 1096, 1132, 1504
AsiGI ACCGGT 1 cut(s) 1315
Asp718I GGTACC 2 cut(s) 1038, 1938
AspS9I GGNCC 3 cut(s) 359, 980, 1877
AsuC2I CCSGG 1 cut(s) 1949
AsuHPI GGTGA 2 cut(s) 699, 1330
AvaII GGWCC 2 cut(s) 980, 1877
BanI GGYRCC 3 cut(s) 138, 1038, 1938
BbsI GAAGAC 1 cut(s) 216
Bbv12I GWGCWC 3 cut(s) 309, 1795, 1891
BbvCI CCTCAGC 3 cut(s) 771, 1306, 1659
BccI CCATC 5 cut(s) 212, 452, 1111, 1581, 1952
BceAI ACGGC 1 cut(s) 410
BciT130I CCWGG 4 cut(s) 698, 1418, 1435, 1445
BclI TGATCA 2 cut(s) 322, 754
BcnI CCSGG 1 cut(s) 1949
BcoDI GTCTC 5 cut(s) 385, 489, 1132, 1226, 1960
BfaI CTAG 4 cut(s) 570, 1046, 1593, 1679
BfmI CTRYAG 5 cut(s) 48, 988, 1238, 1758, 1932
BfuAI ACCTGC 1 cut(s) 1754
BglII AGATCT 1 cut(s) 506
BmcAI AGTACT 1 cut(s) 7
Bme1390I CCNGG 5 cut(s) 698, 1418, 1435, 1445, 1949
Bme18I GGWCC 2 cut(s) 980, 1877
BmgT120I GGNCC 3 cut(s) 359, 980, 1877
BmiI GGNNCC 6 cut(s) 140, 175, 915, 1040, 1415, 1940
BmrFI CCNGG 5 cut(s) 698, 1418, 1435, 1445, 1949
BmsI GCATC 5 cut(s) 370, 592, 806, 1006, 1439
BpiI GAAGAC 1 cut(s) 216
BplI GAGNNNNNCTC 1 cut(s) 2001
Bpu10I CCTNAGC 3 cut(s) 771, 1306, 1659
BpuEI CTTGAG 4 cut(s) 119, 237, 248, 1564
BpuMI CCSGG 1 cut(s) 1949
BsaBI GATNNNNATC 2 cut(s) 321, 384
BsaI GGTCTC 2 cut(s) 1132, 1226
BsaJI CCNNGG 5 cut(s) 72, 550, 884, 1443, 1458
BsaWI WCCGGW 2 cut(s) 1141, 1315
BsaXI ACNNNNNCTCC 4 cut(s) 1139, 1169, 1777, 1807
Bsc4I CCNNNNNNNGG 5 cut(s) 33, 885, 1048, 1423, 1948
Bse118I RCCGGY 3 cut(s) 135, 1032, 1315
Bse1I ACTGG 2 cut(s) 117, 983
Bse3DI GCAATG 1 cut(s) 1323
Bse8I GATNNNNATC 2 cut(s) 321, 384
BseAI TCCGGA 1 cut(s) 1141
BseBI CCWGG 4 cut(s) 698, 1418, 1435, 1445
BseDI CCNNGG 5 cut(s) 72, 550, 884, 1443, 1458
BseGI GGATG 8 cut(s) 211, 382, 604, 814, 1021, 1219, 1430, 1960
BseJI GATNNNNATC 2 cut(s) 321, 384
BseLI CCNNNNNNNGG 5 cut(s) 33, 885, 1048, 1423, 1948
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 9 cut(s) 23, 228, 570, 656, 762, 1278, 1320, 1467, 1650
BseNI ACTGG 2 cut(s) 117, 983
BseRI GAGGAG 8 cut(s) 941, 1160, 1163, 1166, 1363, 1400, 1641, 1644
BseYI CCCAGC 1 cut(s) 1553
BsgI GTGCAG 4 cut(s) 141, 1788, 1811, 1842
BshFI GGCC 1 cut(s) 360
BshNI GGYRCC 3 cut(s) 138, 1038, 1938
BshTI ACCGGT 1 cut(s) 1315
BsiHKAI GWGCWC 3 cut(s) 309, 1795, 1891
BsiSI CCGG 6 cut(s) 136, 1033, 1142, 1316, 1892, 1949
BslFI GGGAC 3 cut(s) 532, 683, 1931
BslI CCNNNNNNNGG 5 cut(s) 33, 885, 1048, 1423, 1948
BsmAI GTCTC 5 cut(s) 385, 489, 1132, 1226, 1960
BsmBI CGTCTC 1 cut(s) 385
BsmFI GGGAC 3 cut(s) 532, 683, 1931
BsmI GAATGC 2 cut(s) 772, 1519
BsnI GGCC 1 cut(s) 360
Bso31I GGTCTC 2 cut(s) 1132, 1226
Bsp1286I GDGCHC 3 cut(s) 309, 1795, 1891
Bsp13I TCCGGA 1 cut(s) 1141
Bsp143I GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
Bsp19I CCATGG 1 cut(s) 72
BspACI CCGC 4 cut(s) 848, 1036, 1641, 1742
BspANI GGCC 1 cut(s) 360
BspCNI CTCAG 9 cut(s) 22, 227, 571, 657, 763, 1277, 1319, 1468, 1651
BspEI TCCGGA 1 cut(s) 1141
BspHI TCATGA 1 cut(s) 325
BspLI GGNNCC 6 cut(s) 140, 175, 915, 1040, 1415, 1940
BspMAI CTGCAG 1 cut(s) 1762
BspMI ACCTGC 1 cut(s) 1754
BspPI GGATC 1 cut(s) 1565
BspQI GCTCTTC 1 cut(s) 297
BspT107I GGYRCC 3 cut(s) 138, 1038, 1938
BspTNI GGTCTC 2 cut(s) 1132, 1226
BsrDI GCAATG 1 cut(s) 1323
BsrFI RCCGGY 3 cut(s) 135, 1032, 1315
BsrI ACTGG 2 cut(s) 117, 983
BssAI RCCGGY 3 cut(s) 135, 1032, 1315
BssECI CCNNGG 5 cut(s) 72, 550, 884, 1443, 1458
BssMI GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
BssT1I CCWWGG 3 cut(s) 72, 884, 1458
Bst2UI CCWGG 4 cut(s) 698, 1418, 1435, 1445
Bst4CI ACNGT 6 cut(s) 49, 341, 1079, 1276, 1933, 1987
Bst6I CTCTTC 3 cut(s) 263, 297, 2002
BstAPI GCANNNNNTGC 3 cut(s) 1288, 1766, 1904
BstC8I GCNNGC 3 cut(s) 238, 655, 1192
BstDEI CTNAG 9 cut(s) 9, 214, 579, 665, 771, 1264, 1306, 1476, 1659
BstDSI CCRYGG 2 cut(s) 72, 550
BstF5I GGATG 8 cut(s) 211, 382, 604, 814, 1021, 1219, 1430, 1960
BstKTI GATC 9 cut(s) 325, 367, 388, 432, 488, 509, 757, 1573, 1598
BstMAI GTCTC 5 cut(s) 385, 489, 1132, 1226, 1960
BstMBI GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
BstNI CCWGG 4 cut(s) 698, 1418, 1435, 1445
BstNSI RCATGY 2 cut(s) 1201, 1973
BstSCI CCNGG 5 cut(s) 696, 1416, 1433, 1443, 1947
BstSFI CTRYAG 5 cut(s) 48, 988, 1238, 1758, 1932
BstV2I GAAGAC 1 cut(s) 216
BstX2I RGATCY 1 cut(s) 506
BstYI RGATCY 1 cut(s) 506
BsuRI GGCC 1 cut(s) 360
BtgI CCRYGG 2 cut(s) 72, 550
BtgZI GCGATG 1 cut(s) 843
BtsCI GGATG 8 cut(s) 211, 382, 604, 814, 1021, 1219, 1430, 1960
BtsI GCAGTG 3 cut(s) 301, 1096, 1823
BtsIMutI CAGTG 6 cut(s) 124, 301, 346, 1020, 1096, 1823
BveI ACCTGC 1 cut(s) 1754
Cac8I GCNNGC 3 cut(s) 238, 655, 1192
CciI TCATGA 1 cut(s) 325
Cfr10I RCCGGY 3 cut(s) 135, 1032, 1315
Cfr13I GGNCC 3 cut(s) 359, 980, 1877
CseI GACGC 1 cut(s) 617
Csp6I GTAC 6 cut(s) 6, 257, 557, 1039, 1683, 1939
CspAI ACCGGT 1 cut(s) 1315
CviAII CATG 8 cut(s) 73, 167, 326, 1000, 1198, 1729, 1883, 1970
CviQI GTAC 6 cut(s) 6, 257, 557, 1039, 1683, 1939
DdeI CTNAG 9 cut(s) 9, 214, 579, 665, 771, 1264, 1306, 1476, 1659
DpnI GATC 9 cut(s) 324, 366, 387, 431, 487, 508, 756, 1572, 1597
DpnII GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
Eam1104I CTCTTC 3 cut(s) 263, 297, 2002
EarI CTCTTC 3 cut(s) 263, 297, 2002
Eco130I CCWWGG 3 cut(s) 72, 884, 1458
Eco31I GGTCTC 2 cut(s) 1132, 1226
Eco32I GATATC 1 cut(s) 355
Eco47I GGWCC 2 cut(s) 980, 1877
Eco57I CTGAAG 4 cut(s) 653, 807, 1665, 1847
EcoRII CCWGG 4 cut(s) 696, 1416, 1433, 1443
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 3 cut(s) 72, 884, 1458
EcoT22I ATGCAT 1 cut(s) 607
ErhI CCWWGG 3 cut(s) 72, 884, 1458
Esp3I CGTCTC 1 cut(s) 385
FaeI CATG 8 cut(s) 76, 170, 329, 1003, 1201, 1732, 1886, 1973
FaqI GGGAC 3 cut(s) 532, 683, 1931
FatI CATG 8 cut(s) 72, 166, 325, 999, 1197, 1728, 1882, 1969
FbaI TGATCA 2 cut(s) 322, 754
FblI GTMKAC 1 cut(s) 987
FokI GGATG 8 cut(s) 218, 389, 611, 821, 1028, 1226, 1417, 1967
FspBI CTAG 4 cut(s) 570, 1046, 1593, 1679
GsaI CCCAGC 1 cut(s) 1557
HaeIII GGCC 1 cut(s) 360
HapII CCGG 6 cut(s) 136, 1033, 1142, 1316, 1892, 1949
HgaI GACGC 1 cut(s) 617
Hin1II CATG 8 cut(s) 76, 170, 329, 1003, 1201, 1732, 1886, 1973
HincII GTYRAC 1 cut(s) 408
HindII GTYRAC 1 cut(s) 408
HpaII CCGG 6 cut(s) 136, 1033, 1142, 1316, 1892, 1949
HphI GGTGA 2 cut(s) 699, 1330
Hpy166II GTNNAC 7 cut(s) 408, 557, 988, 1261, 1321, 1801, 1877
Hpy188III TCNNGA 8 cut(s) 156, 265, 326, 433, 860, 1142, 1521, 1581
Hpy8I GTNNAC 7 cut(s) 408, 557, 988, 1261, 1321, 1801, 1877
HpyAV CCTTC 3 cut(s) 187, 643, 1330
HpyCH4III ACNGT 6 cut(s) 49, 341, 1079, 1276, 1933, 1987
HpyCH4IV ACGT 1 cut(s) 309
HpyF3I CTNAG 9 cut(s) 9, 214, 579, 665, 771, 1264, 1306, 1476, 1659
HpySE526I ACGT 1 cut(s) 309
Hsp92II CATG 8 cut(s) 76, 170, 329, 1003, 1201, 1732, 1886, 1973
Kpn2I TCCGGA 1 cut(s) 1141
KpnI GGTACC 2 cut(s) 1042, 1942
Ksp22I TGATCA 2 cut(s) 322, 754
Kzo9I GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
LguI GCTCTTC 1 cut(s) 297
LmnI GCTCC 5 cut(s) 99, 1144, 1419, 1798, 1894
LweI GCATC 5 cut(s) 370, 592, 806, 1006, 1439
MaeI CTAG 4 cut(s) 570, 1046, 1593, 1679
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 5 cut(s) 194, 296, 615, 777, 1991
MalI GATC 9 cut(s) 324, 366, 387, 431, 487, 508, 756, 1572, 1597
MboI GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
MflI RGATCY 1 cut(s) 506
MhlI GDGCHC 3 cut(s) 309, 1795, 1891
MluCI AATT 9 cut(s) 88, 479, 933, 1096, 1132, 1421, 1504, 1603, 1831
MlyI GAGTC 7 cut(s) 191, 206, 619, 665, 743, 809, 1823
MmeI TCCRAC 5 cut(s) 801, 937, 1272, 1338, 1731
Mph1103I ATGCAT 1 cut(s) 607
MroI TCCGGA 1 cut(s) 1141
MseI TTAA 6 cut(s) 482, 932, 1029, 1158, 1404, 1509
MslI CAYNNNNRTG 1 cut(s) 312
MspA1I CMGCKG 4 cut(s) 125, 590, 1643, 1742
MspI CCGG 6 cut(s) 136, 1033, 1142, 1316, 1892, 1949
MspR9I CCNGG 5 cut(s) 698, 1418, 1435, 1445, 1949
Mva1269I GAATGC 2 cut(s) 772, 1519
MvaI CCWGG 4 cut(s) 698, 1418, 1435, 1445
NciI CCSGG 1 cut(s) 1949
NcoI CCATGG 1 cut(s) 72
NdeII GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
NlaIII CATG 8 cut(s) 76, 170, 329, 1003, 1201, 1732, 1886, 1973
NlaIV GGNNCC 6 cut(s) 140, 175, 915, 1040, 1415, 1940
NmuCI GTSAC 3 cut(s) 194, 296, 1991
NsiI ATGCAT 1 cut(s) 607
NspI RCATGY 2 cut(s) 1201, 1973
PagI TCATGA 1 cut(s) 325
PaqCI CACCTGC 1 cut(s) 1754
PciSI GCTCTTC 1 cut(s) 297
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 625
PctI GAATGC 2 cut(s) 772, 1519
PfeI GAWTC 5 cut(s) 317, 347, 1003, 1454, 1543
PflFI GACNNNGTC 1 cut(s) 1813
PfoI TCCNGGA 2 cut(s) 1416, 1947
PinAI ACCGGT 1 cut(s) 1315
PleI GAGTC 7 cut(s) 191, 206, 618, 665, 743, 809, 1822
PpsI GAGTC 7 cut(s) 191, 206, 618, 665, 743, 809, 1822
Psp6I CCWGG 4 cut(s) 696, 1416, 1433, 1443
PspFI CCCAGC 1 cut(s) 1553
PspGI CCWGG 4 cut(s) 696, 1416, 1433, 1443
PspN4I GGNNCC 6 cut(s) 140, 175, 915, 1040, 1415, 1940
PspPI GGNCC 3 cut(s) 359, 980, 1877
PsrI GAACNNNNNNTAC 2 cut(s) 1666, 1698
PstI CTGCAG 1 cut(s) 1762
PsuI RGATCY 1 cut(s) 506
PsyI GACNNNGTC 1 cut(s) 1813
PvuII CAGCTG 2 cut(s) 125, 590
RsaI GTAC 6 cut(s) 7, 258, 558, 1040, 1684, 1940
RsaNI GTAC 6 cut(s) 6, 257, 557, 1039, 1683, 1939
RseI CAYNNNNRTG 1 cut(s) 312
SapI GCTCTTC 1 cut(s) 297
SaqAI TTAA 6 cut(s) 482, 932, 1029, 1158, 1404, 1509
Sau3AI GATC 9 cut(s) 322, 364, 385, 429, 485, 506, 754, 1570, 1595
Sau96I GGNCC 3 cut(s) 359, 980, 1877
ScaI AGTACT 1 cut(s) 7
SchI GAGTC 7 cut(s) 191, 206, 619, 665, 743, 809, 1823
ScrFI CCNGG 5 cut(s) 698, 1418, 1435, 1445, 1949
SduI GDGCHC 3 cut(s) 309, 1795, 1891
SfaNI GCATC 5 cut(s) 370, 592, 806, 1006, 1439
SfcI CTRYAG 5 cut(s) 48, 988, 1238, 1758, 1932
SinI GGWCC 2 cut(s) 980, 1877
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 4 cut(s) 98, 252, 263, 1579
SmoI CTYRAG 4 cut(s) 98, 252, 263, 1579
Sse9I AATT 9 cut(s) 88, 479, 933, 1096, 1132, 1421, 1504, 1603, 1831
SsiI CCGC 4 cut(s) 848, 1036, 1641, 1742
SspI AATATT 1 cut(s) 1070
SspMI CTAG 4 cut(s) 570, 1046, 1593, 1679
StyD4I CCNGG 5 cut(s) 696, 1416, 1433, 1443, 1947
StyI CCWWGG 3 cut(s) 72, 884, 1458
TaaI ACNGT 6 cut(s) 49, 341, 1079, 1276, 1933, 1987
TaiI ACGT 1 cut(s) 312
TaqI TCGA 4 cut(s) 157, 890, 1598, 1836
TasI AATT 9 cut(s) 88, 479, 933, 1096, 1132, 1421, 1504, 1603, 1831
TatI WGTACW 1 cut(s) 5
TauI GCSGC 3 cut(s) 850, 1643, 1745
TfiI GAWTC 5 cut(s) 317, 347, 1003, 1454, 1543
Tru1I TTAA 6 cut(s) 482, 932, 1029, 1158, 1404, 1509
Tru9I TTAA 6 cut(s) 482, 932, 1029, 1158, 1404, 1509
TscAI CASTG 6 cut(s) 124, 301, 346, 1027, 1096, 1830
TseFI GTSAC 3 cut(s) 194, 296, 1991
Tsp45I GTSAC 3 cut(s) 194, 296, 1991
TspDTI ATGAA 6 cut(s) 204, 222, 360, 1496, 1650, 1665
TspRI CASTG 6 cut(s) 124, 301, 346, 1027, 1096, 1830
Tth111I GACNNNGTC 1 cut(s) 1813
VpaK11BI GGWCC 2 cut(s) 980, 1877
XapI RAATTY 4 cut(s) 88, 1096, 1132, 1504
XceI RCATGY 2 cut(s) 1201, 1973
XcmI CCANNNNNNNNNTGG 2 cut(s) 79, 1114
XmiI GTMKAC 1 cut(s) 987
XspI CTAG 4 cut(s) 570, 1046, 1593, 1679
ZrmI AGTACT 1 cut(s) 7
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.