Prupe.6G331500_v2.0.a1

Protein FANTASTIC FOUR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014217
Physical Location & Seq
Reverse (-)
28894116 .. 28895162
1047 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G331500.1

Sequence Viewer

Length: 1047 bp
ATGAGCTTCTGTAGAAAGATCGCCCCTCACTCTTTCCTCGGCCTCACCTCAACAACTACTACTACCACTACTTCAACAGCTGCATCAACCTCCATAGATGCTCACCATGAAAAACTCCCCTTCAAATGCCACCACTGCATTTCTCCCCTAAGTTGTACAGCATCAGGAGGAGGAGGGTTGCTAGGTTTGGTCAACGCACCAGATTATCATCACATCAAACACCAACCCCTCCTCTTGGAGTCTTCTTCCATCAAATCCTCCTCCTCCTCATCAGATTCATCATTATCGCCACTGTTTTCTGCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCCTGCAATTGAGTTTGAGGCAAAGAAAGATTATGCAGGTGGGTTTGGGTTCATAGACGACATAGGAGGCGGCGTGGACGGCTTGATGTCGTGCACGGAGAGCCTAGGGTTTGAGAGCTCGGACGAGAGGCGAGTGGATGACCATCAGATCATTGAAACAATCGGCCACCGTCATCAGAATGAAGATGATGATCCTGTGGAGGAGGACGCGTGTTTGAGGATGATGAGGCAGTCGATGAGGAGAGTGTCCAAATGGAAGAGGACGGGGGAGAAGAGAGCGGAGGCCAAGAAATTTCCACCCCCTCTTTCTTCTTTAAACCAGAATGGGCAGCCCAGGTATTTCCTCAGGCCTGTCAGGAAAGAAGGGAGGCTGGAGCTCACGGAGGTCAGGATTTACAGGCCTGAGATCTTGCGTGCTTATCGTCAAGATGGACGGTTGAGATTGCATCTTGTTACCCGCGAACCTGATCTCCAAGAAGAAGAAGAAGTAGAAGGCATACAAGAAGAAAATGAAGAAGAAGAAGAAGAAGAAGACGTTATTGATGAGAAAGAGAGTATAATTAATGTGAAGGAGGCGGAGGAGGAGGAGGAGGAAAAGAAGCTGGCGGTGGGAGAAGGTTTTCGGAGGTGTCAGAATCTGGTGAGCGGCGGCCACCATCAGCACCGTGGAAACTTGGGGGTGTGGAGCCAGCGGCAGCATTGTGTGACAACCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAF

Protein Analysis

349

Amino Acids

39.01

Weight (kDa)

5.44

Isoelectric Point (pI)

79.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014217)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54740
fragaria_vesca FvH4_6g05230
malus_domestica MD04G1210600.v1.1 MD12G1224900.v1.1
prunus_persica Prupe.6G331500_v2.0.a1
pyrus_communis pycom04g18650 pycom12g21030
rosa_chinensis RchiOBHm_Chr3g0453941
rosa_laevigata RLG00000025493
rosa_multiflora Rmu_sc0003556.1_g000030
rosa_roxburghii Rroxscaffold_6G00430780
rosa_rugosa Rorug02G0651900
rosa_samantha Rh3AG054500 Rh3BG056100 Rh3CG055300 Rh3DG056600
rosa_wichuraiana Rw3G004180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 356
Acc36I ACCTGC 1 cut(s) 356
AccBSI CCGCTC 2 cut(s) 608, 975
AccII CGCG 2 cut(s) 539, 789
AciI CCGC 8 cut(s) 399, 608, 787, 905, 935, 975, 978, 1021
AclWI GGATC 1 cut(s) 515
AcoI YGGCCR 2 cut(s) 493, 979
AcsI RAATTY 1 cut(s) 620
AfaI GTAC 1 cut(s) 157
AfiI CCNNNNNNNGG 1 cut(s) 235
AflIII ACRYGT 1 cut(s) 537
AgsI TTSAA 3 cut(s) 75, 124, 485
AjnI CCWGG 2 cut(s) 662, 1040
AloI GAACNNNNNNTCC 2 cut(s) 783, 815
AluBI AGCT 5 cut(s) 6, 80, 447, 706, 931
AluI AGCT 5 cut(s) 6, 80, 447, 706, 931
Alw21I GWGCWC 3 cut(s) 425, 449, 708
Alw44I GTGCAC 1 cut(s) 421
AlwI GGATC 1 cut(s) 515
AlwNI CAGNNNCTG 1 cut(s) 967
AoxI GGCC 6 cut(s) 40, 493, 612, 677, 728, 979
ApaLI GTGCAC 1 cut(s) 421
ApeKI GCWGC 3 cut(s) 80, 658, 1024
ApoI RAATTY 1 cut(s) 620
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 1 cut(s) 948
AspA2I CCTAGG 1 cut(s) 433
AsuHPI GGTGA 3 cut(s) 37, 95, 982
AvrII CCTAGG 1 cut(s) 433
AxyI CCTNAGG 1 cut(s) 674
BaeGI GKGCMC 1 cut(s) 425
BanII GRGCYC 2 cut(s) 449, 708
BbsI GAAGAC 2 cut(s) 234, 867
Bbv12I GWGCWC 3 cut(s) 425, 449, 708
BbvI GCAGC 3 cut(s) 67, 670, 1036
BccI CCATC 4 cut(s) 257, 480, 752, 993
BceAI ACGGC 1 cut(s) 424
BciT130I CCWGG 2 cut(s) 664, 1042
BfaI CTAG 2 cut(s) 182, 434
BfmI CTRYAG 1 cut(s) 10
BfuAI ACCTGC 1 cut(s) 356
BglII AGATCT 1 cut(s) 735
BisI GCNGC 7 cut(s) 81, 400, 659, 976, 979, 1022, 1025
BlnI CCTAGG 1 cut(s) 433
BlsI GCNGC 7 cut(s) 82, 401, 660, 977, 980, 1023, 1026
Bme1390I CCNGG 2 cut(s) 664, 1042
BmiI GGNNCC 1 cut(s) 1016
BmrFI CCNGG 2 cut(s) 664, 1042
BmsI GCATC 4 cut(s) 88, 92, 170, 784
BpiI GAAGAC 2 cut(s) 234, 867
BpmI CTGGAG 1 cut(s) 722
BsaBI GATNNNNATC 3 cut(s) 207, 471, 519
BsaJI CCNNGG 4 cut(s) 37, 433, 662, 994
BsaXI ACNNNNNCTCC 6 cut(s) 387, 417, 524, 554, 783, 813
Bsc4I CCNNNNNNNGG 1 cut(s) 235
Bse21I CCTNAGG 1 cut(s) 674
Bse8I GATNNNNATC 3 cut(s) 207, 471, 519
BseBI CCWGG 2 cut(s) 664, 1042
BseDI CCNNGG 4 cut(s) 37, 433, 662, 994
BseGI GGATG 2 cut(s) 472, 555
BseJI GATNNNNATC 3 cut(s) 207, 471, 519
BseLI CCNNNNNNNGG 1 cut(s) 235
BseMII CTCAG 2 cut(s) 688, 723
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 3 cut(s) 67, 670, 1036
Bsh1236I CGCG 2 cut(s) 539, 789
BshFI GGCC 6 cut(s) 42, 495, 614, 679, 730, 981
BsiHKAI GWGCWC 3 cut(s) 425, 449, 708
BslI CCNNNNNNNGG 1 cut(s) 235
BsnI GGCC 6 cut(s) 42, 495, 614, 679, 730, 981
Bsp1286I GDGCHC 3 cut(s) 425, 449, 708
Bsp1407I TGTACA 1 cut(s) 155
Bsp143I GATC 5 cut(s) 18, 477, 520, 735, 796
BspACI CCGC 8 cut(s) 399, 608, 787, 905, 935, 975, 978, 1021
BspANI GGCC 6 cut(s) 42, 495, 614, 679, 730, 981
BspCNI CTCAG 2 cut(s) 687, 724
BspFNI CGCG 2 cut(s) 539, 789
BspLI GGNNCC 1 cut(s) 1016
BspMI ACCTGC 1 cut(s) 356
BspPI GGATC 1 cut(s) 515
BsrBI CCGCTC 2 cut(s) 608, 975
BsrGI TGTACA 1 cut(s) 155
BssECI CCNNGG 4 cut(s) 37, 433, 662, 994
BssMI GATC 5 cut(s) 18, 477, 520, 735, 796
BssT1I CCWWGG 1 cut(s) 433
Bst2UI CCWGG 2 cut(s) 664, 1042
Bst4CI ACNGT 4 cut(s) 294, 500, 765, 995
Bst6I CTCTTC 2 cut(s) 581, 596
BstAUI TGTACA 1 cut(s) 155
BstC8I GCNNGC 3 cut(s) 744, 933, 1019
BstDEI CTNAG 3 cut(s) 149, 674, 732
BstDSI CCRYGG 1 cut(s) 994
BstF5I GGATG 2 cut(s) 472, 555
BstFNI CGCG 2 cut(s) 539, 789
BstKTI GATC 5 cut(s) 21, 480, 523, 738, 799
BstMBI GATC 5 cut(s) 18, 477, 520, 735, 796
BstMWI GCNNNNNNNGC 3 cut(s) 135, 408, 429
BstNI CCWGG 2 cut(s) 664, 1042
BstSCI CCNGG 2 cut(s) 662, 1040
BstSFI CTRYAG 1 cut(s) 10
BstSLI GKGCMC 1 cut(s) 425
BstUI CGCG 2 cut(s) 539, 789
BstV1I GCAGC 3 cut(s) 67, 670, 1036
BstV2I GAAGAC 2 cut(s) 234, 867
BstX2I RGATCY 1 cut(s) 735
BstYI RGATCY 1 cut(s) 735
Bsu36I CCTNAGG 1 cut(s) 674
BsuRI GGCC 6 cut(s) 42, 495, 614, 679, 730, 981
BtgI CCRYGG 1 cut(s) 994
BtsCI GGATG 2 cut(s) 472, 555
BtsI GCAGTG 1 cut(s) 133
BtsIMutI CAGTG 2 cut(s) 133, 290
BveI ACCTGC 1 cut(s) 356
Cac8I GCNNGC 3 cut(s) 744, 933, 1019
CaiI CAGNNNCTG 1 cut(s) 967
CseI GACGC 1 cut(s) 545
CsiI ACCWGGT 1 cut(s) 1040
Csp6I GTAC 1 cut(s) 156
CviAII CATG 1 cut(s) 107
CviQI GTAC 1 cut(s) 156
DdeI CTNAG 3 cut(s) 149, 674, 732
DpnI GATC 5 cut(s) 20, 479, 522, 737, 798
DpnII GATC 5 cut(s) 18, 477, 520, 735, 796
DraI TTTAAA 1 cut(s) 645
EaeI YGGCCR 2 cut(s) 493, 979
Eam1104I CTCTTC 2 cut(s) 581, 596
EarI CTCTTC 2 cut(s) 581, 596
EciI GGCGGA 1 cut(s) 920
Ecl136II GAGCTC 2 cut(s) 447, 706
Eco130I CCWWGG 1 cut(s) 433
Eco147I AGGCCT 2 cut(s) 679, 730
Eco24I GRGCYC 2 cut(s) 449, 708
Eco53kI GAGCTC 2 cut(s) 447, 706
Eco81I CCTNAGG 1 cut(s) 674
EcoICRI GAGCTC 2 cut(s) 447, 706
EcoRII CCWGG 2 cut(s) 662, 1040
EcoT14I CCWWGG 1 cut(s) 433
EcoT38I GRGCYC 2 cut(s) 449, 708
ErhI CCWWGG 1 cut(s) 433
FaeI CATG 1 cut(s) 110
FaiI YATR 7 cut(s) 95, 108, 363, 383, 392, 827, 887
FatI CATG 1 cut(s) 106
FauI CCCGC 1 cut(s) 794
Fnu4HI GCNGC 7 cut(s) 81, 400, 659, 976, 979, 1022, 1025
FokI GGATG 2 cut(s) 479, 562
FriOI GRGCYC 2 cut(s) 449, 708
Fsp4HI GCNGC 7 cut(s) 81, 400, 659, 976, 979, 1022, 1025
FspBI CTAG 2 cut(s) 182, 434
GluI GCNGC 7 cut(s) 81, 400, 659, 976, 979, 1022, 1025
GsuI CTGGAG 1 cut(s) 722
HaeIII GGCC 6 cut(s) 42, 495, 614, 679, 730, 981
HgaI GACGC 1 cut(s) 545
Hin1II CATG 1 cut(s) 110
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HinfI GANTC 3 cut(s) 239, 275, 964
HphI GGTGA 3 cut(s) 37, 95, 982
Hpy166II GTNNAC 3 cut(s) 193, 406, 423
Hpy188I TCNGA 6 cut(s) 274, 451, 477, 507, 954, 963
Hpy188III TCNNGA 4 cut(s) 165, 685, 718, 755
Hpy8I GTNNAC 3 cut(s) 193, 406, 423
HpyAV CCTTC 7 cut(s) 130, 318, 324, 686, 815, 892, 938
HpyCH4III ACNGT 4 cut(s) 294, 500, 765, 995
HpyCH4IV ACGT 1 cut(s) 864
HpyCH4V TGCA 6 cut(s) 83, 138, 335, 365, 423, 775
HpyF10VI GCNNNNNNNGC 3 cut(s) 135, 408, 429
HpyF3I CTNAG 3 cut(s) 149, 674, 732
HpySE526I ACGT 1 cut(s) 864
Hsp92II CATG 1 cut(s) 110
Kzo9I GATC 5 cut(s) 18, 477, 520, 735, 796
LmnI GCTCC 2 cut(s) 703, 1014
Lsp1109I GCAGC 3 cut(s) 67, 670, 1036
LweI GCATC 4 cut(s) 88, 92, 170, 784
MabI ACCWGGT 1 cut(s) 1040
MaeI CTAG 2 cut(s) 182, 434
MaeII ACGT 1 cut(s) 864
MaeIII GTNAC 2 cut(s) 781, 1033
MalI GATC 5 cut(s) 20, 479, 522, 737, 798
MbiI CCGCTC 2 cut(s) 608, 975
MboI GATC 5 cut(s) 18, 477, 520, 735, 796
MfeI CAATTG 1 cut(s) 336
MflI RGATCY 1 cut(s) 735
MhlI GDGCHC 3 cut(s) 425, 449, 708
MluCI AATT 3 cut(s) 336, 620, 888
MluI ACGCGT 1 cut(s) 537
MlyI GAGTC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 948
MseI TTAA 2 cut(s) 644, 891
MslI CAYNNNNRTG 1 cut(s) 507
MspA1I CMGCKG 2 cut(s) 80, 1021
MspR9I CCNGG 2 cut(s) 664, 1042
MunI CAATTG 1 cut(s) 336
MvaI CCWGG 2 cut(s) 664, 1042
MvnI CGCG 2 cut(s) 539, 789
MwoI GCNNNNNNNGC 3 cut(s) 135, 408, 429
NdeII GATC 5 cut(s) 18, 477, 520, 735, 796
NlaIII CATG 1 cut(s) 110
NlaIV GGNNCC 1 cut(s) 1016
NmeAIII GCCGAG 1 cut(s) 18
NmuCI GTSAC 1 cut(s) 1033
PaqCI CACCTGC 1 cut(s) 356
PceI AGGCCT 2 cut(s) 679, 730
PdmI GAANNNNTTC 1 cut(s) 948
PfeI GAWTC 2 cut(s) 275, 964
PkrI GCNGC 7 cut(s) 82, 401, 660, 977, 980, 1023, 1026
PleI GAGTC 1 cut(s) 247
PpsI GAGTC 1 cut(s) 247
PshBI ATTAAT 1 cut(s) 891
Psp124BI GAGCTC 2 cut(s) 449, 708
Psp6I CCWGG 2 cut(s) 662, 1040
PspGI CCWGG 2 cut(s) 662, 1040
PspN4I GGNNCC 1 cut(s) 1016
PstNI CAGNNNCTG 1 cut(s) 967
PsuI RGATCY 1 cut(s) 735
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 1 cut(s) 157
RsaNI GTAC 1 cut(s) 156
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 2 cut(s) 449, 708
SaqAI TTAA 2 cut(s) 644, 891
SatI GCNGC 7 cut(s) 81, 400, 659, 976, 979, 1022, 1025
Sau3AI GATC 5 cut(s) 18, 477, 520, 735, 796
SchI GAGTC 1 cut(s) 248
ScrFI CCNGG 2 cut(s) 664, 1042
SduI GDGCHC 3 cut(s) 425, 449, 708
SexAI ACCWGGT 1 cut(s) 1040
SfaNI GCATC 4 cut(s) 88, 92, 170, 784
SfcI CTRYAG 1 cut(s) 10
SmiMI CAYNNNNRTG 1 cut(s) 507
Sse9I AATT 3 cut(s) 336, 620, 888
SseBI AGGCCT 2 cut(s) 679, 730
SsiI CCGC 8 cut(s) 399, 608, 787, 905, 935, 975, 978, 1021
SspMI CTAG 2 cut(s) 182, 434
SstI GAGCTC 2 cut(s) 449, 708
StuI AGGCCT 2 cut(s) 679, 730
StyD4I CCNGG 2 cut(s) 662, 1040
StyI CCWWGG 1 cut(s) 433
TaaI ACNGT 4 cut(s) 294, 500, 765, 995
TaiI ACGT 1 cut(s) 867
TaqI TCGA 1 cut(s) 563
TasI AATT 3 cut(s) 336, 620, 888
TatI WGTACW 1 cut(s) 155
TauI GCSGC 4 cut(s) 402, 978, 981, 1024
TfiI GAWTC 2 cut(s) 275, 964
Tru1I TTAA 2 cut(s) 644, 891
Tru9I TTAA 2 cut(s) 644, 891
TscAI CASTG 2 cut(s) 140, 297
TseFI GTSAC 1 cut(s) 1033
TseI GCWGC 3 cut(s) 80, 658, 1024
Tsp45I GTSAC 1 cut(s) 1033
TspDTI ATGAA 5 cut(s) 123, 267, 370, 525, 855
TspGWI ACGGA 2 cut(s) 440, 725
TspRI CASTG 2 cut(s) 140, 297
VneI GTGCAC 1 cut(s) 421
VspI ATTAAT 1 cut(s) 891
XapI RAATTY 1 cut(s) 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 992
XmaJI CCTAGG 1 cut(s) 433
XmnI GAANNNNTTC 1 cut(s) 948
XspI CTAG 2 cut(s) 182, 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.