Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0011183

Physical Location & Seq

Genomic Coordinates Forward (+)

29627457 .. 29629571

Gene Structure 2115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G345100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1065 bp

ATGGATGAGGTTGAAGAAGCTAACAAAGCAGCTGTTGAGAGCTGCCACGGAGTTCTCAGCCATTTGTGTCAACCTAAGGGCCAGGTTCATTGTAAAAATTTACTGGCAGAAACTGAGGAGGCTGTGTTCAAGTTCAAGAGAGTTGTGTCTCTTCTGGGCGGTGGCTTAGGCCATGGAAGAGTGAGAAAGTTGAAGAAGTTCAAGCCGCCACCTTTGCCTCAAAACATCTTCCTAGATGGCCCTAATTACAGATTAGATATTTCAACAAAACCCCTCCAATTACTCCCACCTACTTCTCTTGAAAACCGACGCGCAGAAAAGGATTCGAAGTATGGAAGTTCTCTGCAGCACACACAGAGCCAGAAAGTGTTTCTTGGAAACCCAGTAGTGGATTTGGATATGAAAATCAAGCACCCTCTCCAAATTCCCAAAACAAAACCATTGCAACAGTATCATTTCCTCGAACAGAAGCATGACCATCGGCAAGAGATACAAAGATTGCAGCTTCAGCCCCAACAGTTGAAATATCAGGCTGATACAATGTACTCTGGGAGAAACCGTGGCATCAACCTTGCATTTGATAGGTCTACTACCCGCACTCCCTCCATGTCGTCAGCCAGATCATTTGTATCATGTTTGAGCATGGATGGTGGTGTGGCTAACACTCACTGCGATTCGTTCCAACTAATCCGCGGTGTGCCTCAGCCGCCTGATCGGATCTCACAACAACAAAGGAGGTGCAATGGTGCCGGGGAAAAGGGAACTGTAAAATGCGGCAGTAGTGGTAAATGCCAGTATCCAAAGAAGAGGAAAGTGAGGGTGAAAAGATCGTTTAAGGTTCCTGCCATTAGTAACAAGATTGCAGACATTCCAGCTGATGAATATTCATGGAGGAAATACGGGCAGAAGCCAATTAAGGGTTCCCCCTATCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGGTGTCCAGCGAGGAAACATGTTGAGAGAAGTCTTGAAGACCCTGCGATGCTCGTCGTCACCTACGAAGGTGAGCATAAGCATTCACCATCTGACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Plant_zn_clust WRKY

Protein Analysis

355

Amino Acids

39.98

Weight (kDa)

9.74

Isoelectric Point (pI)

50.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04670 AT3G04670 AT5G28650
fragaria_vesca	FvH4_6g02660 FvH4_6g02660
malus_domestica	MD04G1226400.v1.1 MD12G1243400.v1.1
prunus_persica	Prupe.6G345100_v2.0.a1
pyrus_communis	pycom04g19960 pycom12g22250
rosa_chinensis	RchiOBHm_Chr3g0450591
rosa_laevigata	RLG00000025718
rosa_multiflora	Rmu_sc0000078.1_g000042
rosa_roxburghii	Rroxscaffold_6G00428290
rosa_rugosa	Rorug02G0629000
rosa_samantha	Rh3AG029700 Rh3BG030100 Rh3CG029000 Rh3DG029800
rosa_wichuraiana	Rw3G002290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	746
AccI	GTMKAC	1 cut(s)	587
AccII	CGCG	2 cut(s)	312, 693
AciI	CCGC	7 cut(s)	159, 206, 595, 691, 693, 707, 774
AclWI	GGATC	1 cut(s)	725
AcsI	RAATTY	2 cut(s)	97, 423
AcuI	CTGAAG	1 cut(s)	491
AfaI	GTAC	1 cut(s)	545
AfiI	CCNNNNNNNGG	3 cut(s)	388, 917, 933
AflIII	ACRYGT	1 cut(s)	982
AgsI	TTSAA	9 cut(s)	14, 130, 136, 193, 202, 264, 302, 523, 1001
AjnI	CCWGG	1 cut(s)	81
AjuI	GAANNNNNNNTTGG	2 cut(s)	904, 936
AloI	GAACNNNNNNTCC	2 cut(s)	110, 142
AluBI	AGCT	5 cut(s)	20, 32, 42, 505, 875
AluI	AGCT	5 cut(s)	20, 32, 42, 505, 875
Alw26I	GTCTC	1 cut(s)	153
AlwI	GGATC	1 cut(s)	725
AlwNI	CAGNNNCTG	1 cut(s)	113
AoxI	GGCC	3 cut(s)	79, 169, 238
ApeKI	GCWGC	6 cut(s)	29, 42, 346, 502, 951, 954
ApoI	RAATTY	2 cut(s)	97, 423
Asp700I	GAANNNNTTC	1 cut(s)	197
AspA2I	CCTAGG	1 cut(s)	932
AspLEI	GCGC	1 cut(s)	314
AspS9I	GGNCC	2 cut(s)	79, 239
AsuC2I	CCSGG	1 cut(s)	751
AsuHPI	GGTGA	4 cut(s)	832, 1015, 1041, 1046
AsuII	TTCGAA	1 cut(s)	326
AvrII	CCTAGG	1 cut(s)	932
AxyI	CCTNAGG	1 cut(s)	75
BanI	GGYRCC	1 cut(s)	746
BbsI	GAAGAC	1 cut(s)	1008
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	6 cut(s)	29, 41, 358, 514, 963, 966
BccI	CCATC	4 cut(s)	230, 486, 641, 1060
BcgI	CGANNNNNNTGC	2 cut(s)	461, 495
BciT130I	CCWGG	1 cut(s)	83
BciVI	GTATCC	2 cut(s)	807, 932
BcnI	CCSGG	1 cut(s)	751
BcoDI	GTCTC	1 cut(s)	153
BfaI	CTAG	2 cut(s)	233, 933
BfmI	CTRYAG	1 cut(s)	344
BfuI	GTATCC	2 cut(s)	807, 932
BisI	GCNGC	9 cut(s)	30, 43, 206, 347, 503, 707, 775, 952, 955
BlnI	CCTAGG	1 cut(s)	932
BlsI	GCNGC	9 cut(s)	31, 44, 207, 348, 504, 708, 776, 953, 956
Bme1390I	CCNGG	2 cut(s)	83, 751
BmgT120I	GGNCC	2 cut(s)	79, 239
BmiI	GGNNCC	3 cut(s)	748, 840, 922
BmrFI	CCNGG	2 cut(s)	83, 751
BmrI	ACTGGG	1 cut(s)	377
BmsI	GCATC	2 cut(s)	573, 1002
BmuI	ACTGGG	1 cut(s)	377
BpiI	GAAGAC	1 cut(s)	1008
Bpu10I	CCTNAGC	2 cut(s)	166, 702
Bpu14I	TTCGAA	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	751
BsaJI	CCNNGG	6 cut(s)	46, 172, 559, 691, 750, 932
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 544, 574, 583, 613
Bsc4I	CCNNNNNNNGG	3 cut(s)	388, 917, 933
Bse1I	ACTGG	4 cut(s)	108, 383, 793, 1060
Bse21I	CCTNAGG	1 cut(s)	75
Bse3DI	GCAATG	2 cut(s)	440, 748
BseBI	CCWGG	1 cut(s)	83
BseDI	CCNNGG	6 cut(s)	46, 172, 559, 691, 750, 932
BseGI	GGATG	2 cut(s)	10, 652
BseLI	CCNNNNNNNGG	3 cut(s)	388, 917, 933
BseMI	GCAATG	2 cut(s)	440, 748
BseMII	CTCAG	3 cut(s)	70, 105, 716
BseNI	ACTGG	4 cut(s)	108, 383, 793, 1060
BseRI	GAGGAG	1 cut(s)	131
BseXI	GCAGC	6 cut(s)	29, 41, 358, 514, 963, 966
BsgI	GTGCAG	1 cut(s)	970
Bsh1236I	CGCG	2 cut(s)	312, 693
BshFI	GGCC	3 cut(s)	81, 171, 240
BshNI	GGYRCC	1 cut(s)	746
BsiSI	CCGG	1 cut(s)	750
BslI	CCNNNNNNNGG	3 cut(s)	388, 917, 933
BsmAI	GTCTC	1 cut(s)	153
BsmI	GAATGC	1 cut(s)	1045
BsnI	GGCC	3 cut(s)	81, 171, 240
Bsp119I	TTCGAA	1 cut(s)	326
Bsp143I	GATC	4 cut(s)	620, 712, 717, 827
Bsp19I	CCATGG	1 cut(s)	172
BspACI	CCGC	7 cut(s)	159, 206, 595, 691, 693, 707, 774
BspANI	GGCC	3 cut(s)	81, 171, 240
BspCNI	CTCAG	3 cut(s)	69, 106, 715
BspFNI	CGCG	2 cut(s)	312, 693
BspLI	GGNNCC	3 cut(s)	748, 840, 922
BspMAI	CTGCAG	1 cut(s)	348
BspPI	GGATC	1 cut(s)	725
BspT104I	TTCGAA	1 cut(s)	326
BspT107I	GGYRCC	1 cut(s)	746
BsrDI	GCAATG	2 cut(s)	440, 748
BsrI	ACTGG	4 cut(s)	108, 383, 793, 1060
BssECI	CCNNGG	6 cut(s)	46, 172, 559, 691, 750, 932
BssMI	GATC	4 cut(s)	620, 712, 717, 827
BssT1I	CCWWGG	2 cut(s)	172, 932
Bst2UI	CCWGG	1 cut(s)	83
Bst4CI	ACNGT	4 cut(s)	450, 519, 560, 766
Bst6I	CTCTTC	3 cut(s)	156, 172, 800
BstBI	TTCGAA	1 cut(s)	326
BstDEI	CTNAG	5 cut(s)	56, 75, 114, 166, 702
BstDSI	CCRYGG	4 cut(s)	46, 172, 559, 691
BstENI	CCTNNNNNAGG	1 cut(s)	931
BstF5I	GGATG	2 cut(s)	10, 652
BstFNI	CGCG	2 cut(s)	312, 693
BstHHI	GCGC	1 cut(s)	314
BstKTI	GATC	4 cut(s)	623, 715, 720, 830
BstMAI	GTCTC	1 cut(s)	153
BstMBI	GATC	4 cut(s)	620, 712, 717, 827
BstMWI	GCNNNNNNNGC	4 cut(s)	26, 214, 508, 706
BstNI	CCWGG	1 cut(s)	83
BstNSI	RCATGY	1 cut(s)	986
BstSCI	CCNGG	2 cut(s)	81, 749
BstSFI	CTRYAG	1 cut(s)	344
BstUI	CGCG	2 cut(s)	312, 693
BstV1I	GCAGC	6 cut(s)	29, 41, 358, 514, 963, 966
BstV2I	GAAGAC	1 cut(s)	1008
BstX2I	RGATCY	1 cut(s)	717
BstYI	RGATCY	1 cut(s)	717
Bsu36I	CCTNAGG	1 cut(s)	75
BsuI	GTATCC	2 cut(s)	807, 932
BsuRI	GGCC	3 cut(s)	81, 171, 240
BtgI	CCRYGG	4 cut(s)	46, 172, 559, 691
BtgZI	GCGATG	1 cut(s)	1025
BtsCI	GGATG	2 cut(s)	10, 652
BtsI	GCAGTG	1 cut(s)	667
BtsIMutI	CAGTG	1 cut(s)	667
CaiI	CAGNNNCTG	1 cut(s)	113
CfoI	GCGC	1 cut(s)	314
Cfr13I	GGNCC	2 cut(s)	79, 239
Cfr42I	CCGCGG	1 cut(s)	694
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	1 cut(s)	544
CviAII	CATG	8 cut(s)	173, 473, 607, 633, 643, 888, 958, 983
CviQI	GTAC	1 cut(s)	544
DdeI	CTNAG	5 cut(s)	56, 75, 114, 166, 702
DpnI	GATC	4 cut(s)	622, 714, 719, 829
DpnII	GATC	4 cut(s)	620, 712, 717, 827
Eam1104I	CTCTTC	3 cut(s)	156, 172, 800
EarI	CTCTTC	3 cut(s)	156, 172, 800
Eco130I	CCWWGG	2 cut(s)	172, 932
Eco57I	CTGAAG	1 cut(s)	491
Eco81I	CCTNAGG	1 cut(s)	75
EcoNI	CCTNNNNNAGG	1 cut(s)	931
EcoRII	CCWGG	1 cut(s)	81
EcoT14I	CCWWGG	2 cut(s)	172, 932
ErhI	CCWWGG	2 cut(s)	172, 932
FaeI	CATG	8 cut(s)	176, 476, 610, 636, 646, 891, 961, 986
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FatI	CATG	8 cut(s)	172, 472, 606, 632, 642, 887, 957, 982
FauI	CCCGC	1 cut(s)	602
FblI	GTMKAC	1 cut(s)	587
Fnu4HI	GCNGC	9 cut(s)	30, 43, 206, 347, 503, 707, 775, 952, 955
FokI	GGATG	2 cut(s)	17, 659
Fsp4HI	GCNGC	9 cut(s)	30, 43, 206, 347, 503, 707, 775, 952, 955
FspBI	CTAG	2 cut(s)	233, 933
GlaI	GCGC	1 cut(s)	313
GluI	GCNGC	9 cut(s)	30, 43, 206, 347, 503, 707, 775, 952, 955
HaeIII	GGCC	3 cut(s)	81, 171, 240
HapII	CCGG	1 cut(s)	750
HgaI	GACGC	1 cut(s)	318
HhaI	GCGC	1 cut(s)	314
Hin1II	CATG	8 cut(s)	176, 476, 610, 636, 646, 891, 961, 986
Hin6I	GCGC	1 cut(s)	312
HinP1I	GCGC	1 cut(s)	312
HincII	GTYRAC	1 cut(s)	71
HindII	GTYRAC	1 cut(s)	71
HinfI	GANTC	2 cut(s)	323, 674
HpaII	CCGG	1 cut(s)	750
HphI	GGTGA	4 cut(s)	832, 1015, 1041, 1046
Hpy166II	GTNNAC	2 cut(s)	71, 588
Hpy188I	TCNGA	2 cut(s)	717, 1057
Hpy188III	TCNNGA	3 cut(s)	136, 299, 998
Hpy8I	GTNNAC	2 cut(s)	71, 588
Hpy99I	CGWCG	2 cut(s)	312, 1022
HpyAV	CCTTC	1 cut(s)	1025
HpyCH4III	ACNGT	4 cut(s)	450, 519, 560, 766
HpyCH4V	TGCA	7 cut(s)	346, 445, 502, 575, 741, 863, 951
HpyF10VI	GCNNNNNNNGC	4 cut(s)	26, 214, 508, 706
HpyF3I	CTNAG	5 cut(s)	56, 75, 114, 166, 702
Hsp92II	CATG	8 cut(s)	176, 476, 610, 636, 646, 891, 961, 986
HspAI	GCGC	1 cut(s)	312
KspI	CCGCGG	1 cut(s)	694
Kzo9I	GATC	4 cut(s)	620, 712, 717, 827
Lsp1109I	GCAGC	6 cut(s)	29, 41, 358, 514, 963, 966
LweI	GCATC	2 cut(s)	573, 1002
MaeI	CTAG	2 cut(s)	233, 933
MaeIII	GTNAC	2 cut(s)	851, 1021
MalI	GATC	4 cut(s)	622, 714, 719, 829
MboI	GATC	4 cut(s)	620, 712, 717, 827
MboII	GAAGA	7 cut(s)	26, 143, 189, 205, 220, 817, 1013
MflI	RGATCY	1 cut(s)	717
MluCI	AATT	5 cut(s)	97, 244, 278, 423, 912
MmeI	TCCRAC	1 cut(s)	706
MroXI	GAANNNNTTC	1 cut(s)	197
MseI	TTAA	2 cut(s)	834, 915
MspA1I	CMGCKG	3 cut(s)	32, 693, 875
MspI	CCGG	1 cut(s)	750
MspR9I	CCNGG	2 cut(s)	83, 751
Mva1269I	GAATGC	1 cut(s)	1045
MvaI	CCWGG	1 cut(s)	83
MvnI	CGCG	2 cut(s)	312, 693
MwoI	GCNNNNNNNGC	4 cut(s)	26, 214, 508, 706
NciI	CCSGG	1 cut(s)	751
NcoI	CCATGG	1 cut(s)	172
NdeII	GATC	4 cut(s)	620, 712, 717, 827
NlaIII	CATG	8 cut(s)	176, 476, 610, 636, 646, 891, 961, 986
NlaIV	GGNNCC	3 cut(s)	748, 840, 922
NmuCI	GTSAC	1 cut(s)	1021
NspI	RCATGY	1 cut(s)	986
NspV	TTCGAA	1 cut(s)	326
PciI	ACATGT	1 cut(s)	982
PcsI	WCGNNNNNNNCGW	1 cut(s)	1026
PctI	GAATGC	1 cut(s)	1045
PdmI	GAANNNNTTC	1 cut(s)	197
PfeI	GAWTC	2 cut(s)	323, 674
PkrI	GCNGC	9 cut(s)	31, 44, 207, 348, 504, 708, 776, 953, 956
PscI	ACATGT	1 cut(s)	982
Psp6I	CCWGG	1 cut(s)	81
PspGI	CCWGG	1 cut(s)	81
PspN4I	GGNNCC	3 cut(s)	748, 840, 922
PspPI	GGNCC	2 cut(s)	79, 239
PstI	CTGCAG	1 cut(s)	348
PstNI	CAGNNNCTG	1 cut(s)	113
PsuI	RGATCY	1 cut(s)	717
PvuII	CAGCTG	2 cut(s)	32, 875
RsaI	GTAC	1 cut(s)	545
RsaNI	GTAC	1 cut(s)	544
SacII	CCGCGG	1 cut(s)	694
SaqAI	TTAA	2 cut(s)	834, 915
SatI	GCNGC	9 cut(s)	30, 43, 206, 347, 503, 707, 775, 952, 955
Sau3AI	GATC	4 cut(s)	620, 712, 717, 827
Sau96I	GGNCC	2 cut(s)	79, 239
ScrFI	CCNGG	2 cut(s)	83, 751
SfaNI	GCATC	2 cut(s)	573, 1002
SfcI	CTRYAG	1 cut(s)	344
Sfr303I	CCGCGG	1 cut(s)	694
SfuI	TTCGAA	1 cut(s)	326
SgrBI	CCGCGG	1 cut(s)	694
Sse9I	AATT	5 cut(s)	97, 244, 278, 423, 912
SsiI	CCGC	7 cut(s)	159, 206, 595, 691, 693, 707, 774
SspI	AATATT	1 cut(s)	884
SspMI	CTAG	2 cut(s)	233, 933
StyD4I	CCNGG	2 cut(s)	81, 749
StyI	CCWWGG	2 cut(s)	172, 932
TaaI	ACNGT	4 cut(s)	450, 519, 560, 766
TaqI	TCGA	2 cut(s)	326, 462
TasI	AATT	5 cut(s)	97, 244, 278, 423, 912
TatI	WGTACW	1 cut(s)	543
TauI	GCSGC	3 cut(s)	208, 709, 777
TfiI	GAWTC	2 cut(s)	323, 674
Tru1I	TTAA	2 cut(s)	834, 915
Tru9I	TTAA	2 cut(s)	834, 915
TscAI	CASTG	1 cut(s)	674
TseFI	GTSAC	1 cut(s)	1021
TseI	GCWGC	6 cut(s)	29, 42, 346, 502, 951, 954
Tsp45I	GTSAC	1 cut(s)	1021
TspDTI	ATGAA	4 cut(s)	77, 416, 876, 894
TspGWI	ACGGA	1 cut(s)	63
TspRI	CASTG	1 cut(s)	674
XagI	CCTNNNNNAGG	1 cut(s)	931
XapI	RAATTY	2 cut(s)	97, 423
XceI	RCATGY	1 cut(s)	986
XmaJI	CCTAGG	1 cut(s)	932
XmiI	GTMKAC	1 cut(s)	587
XmnI	GAANNNNTTC	1 cut(s)	197
XspI	CTAG	2 cut(s)	233, 933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.