Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015242

Physical Location & Seq

Genomic Coordinates Forward (+)

1504646 .. 1506252

Gene Structure 1607 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G011300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGGCTGACCAGCCAGCACAAGGAGATCATTGCACCTCCGAAAGCAGAAGAAAGGGCACATCCGGCCGCGCTGGAAGGCCTGCTTCTAACACCGAGGCGGCGGCAACGACAAACAATACTAGTACAAGCAGTACAGTAGTAGTAAGTGGCGCAGCTCCATGTGGAGCCTGCAAGTTTCTGAGGAGGAAGTGCATTAGTGGGTGCATATTTGCACCCCATTTTGGTTCAGACCAAGGAGCTGCACGCTTTGCAGCGGTGCACAAGGTGTTTGGGGCAAGTAATGTGTCAAAGCTTTTGTTGCACATTCCCTTGAACCGCCGCCAAGATGCCGTCGTCACCATTTCTTATGAGGCTCAAGCTAGGCTCGCTGATCCCGTCTATGGTTGTGTCTCAACCATTCTTGCTTTGCAACAACAGGTTGCATCTTTGCAAGCCGAGCTTGCAATGGTGCAAACTCAGCTGATAAACAGTAGATTTGCATTTGCAAACGCCCTTCAGATCAGCACCCAGCAGCGGCAGCAGCATCAGAAACAACAGCAACAACAGCAACAACATGAGCAGCAGCAGAACATGGCTTTGATGTTGCAGCCTGCCTACTCCAACAGCTCCTCTGCTTCCACTAATCTCATCAACATGTGCAGCTTCACCTCTAATTTTGACCTTGCAGCCGAGACTGCGCCATCTTCACAAAGCTTGGACCCTCTTCAGCTTTCAAGGCCATCCCAAGACGAAGAAGATGACGAGGAAGAGAGTCAAGTTCCCCTCATGTTCGCCAATGATCGATACACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0023052 GO:0031347 GO:0032101 GO:0032870 GO:0042221 GO:0043900 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080134 GO:1900150 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LOB

Protein Analysis

264

Amino Acids

28.5

Weight (kDa)

6.29

Isoelectric Point (pI)

61.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03760
malus_domestica	MD11G1229500.v1.1 MD12G1009400.v1.1 MD14G1006900.v1.1
prunus_persica	Prupe.7G011300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0496241
rosa_laevigata	RLG00000022544
rosa_multiflora	Rmu_sc0004080.1_g000014 Rmu_ssc0000454.1_g000007
rosa_roxburghii	Rroxscaffold_6G00389310
rosa_rugosa	Rorug03G0281000
rosa_samantha	Rh3AG327900 Rh3BG364100 Rh3CG361000 Rh3DG364000
rosa_wichuraiana	Rw3G028720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	69
AciI	CCGC	7 cut(s)	67, 98, 101, 254, 316, 319, 514
AclWI	GGATC	1 cut(s)	365
AcoI	YGGCCR	1 cut(s)	64
AcuI	CTGAAG	2 cut(s)	479, 689
AdeI	CACNNNGTG	1 cut(s)	265
AfaI	GTAC	2 cut(s)	124, 133
AfiI	CCNNNNNNNGG	4 cut(s)	20, 221, 380, 513
AflIII	ACRYGT	1 cut(s)	633
AgsI	TTSAA	2 cut(s)	313, 714
AhlI	ACTAGT	1 cut(s)	119
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	2 cut(s)	394, 665
Alw44I	GTGCAC	1 cut(s)	257
AlwI	GGATC	1 cut(s)	365
AoxI	GGCC	3 cut(s)	64, 77, 716
ApaLI	GTGCAC	1 cut(s)	257
AspLEI	GCGC	3 cut(s)	71, 152, 679
AspS9I	GGNCC	1 cut(s)	697
AsuHPI	GGTGA	2 cut(s)	328, 637
AvaII	GGWCC	1 cut(s)	697
BaeGI	GKGCMC	2 cut(s)	59, 261
Bbv12I	GWGCWC	1 cut(s)	261
BccI	CCATC	2 cut(s)	688, 727
BceAI	ACGGC	1 cut(s)	314
BcoDI	GTCTC	2 cut(s)	394, 665
BcuI	ACTAGT	1 cut(s)	119
BfaI	CTAG	2 cut(s)	120, 360
Bme18I	GGWCC	1 cut(s)	697
BmgT120I	GGNCC	1 cut(s)	697
BmiI	GGNNCC	2 cut(s)	166, 699
BmsI	GCATC	3 cut(s)	316, 431, 532
BpuEI	CTTGAG	1 cut(s)	339
Bsa29I	ATCGAT	1 cut(s)	781
BsaJI	CCNNGG	2 cut(s)	93, 232
Bsc4I	CCNNNNNNNGG	4 cut(s)	20, 221, 380, 513
Bse3DI	GCAATG	2 cut(s)	28, 450
BseCI	ATCGAT	1 cut(s)	781
BseDI	CCNNGG	2 cut(s)	93, 232
BseGI	GGATG	2 cut(s)	59, 719
BseLI	CCNNNNNNNGG	4 cut(s)	20, 221, 380, 513
BseMI	GCAATG	2 cut(s)	28, 450
BseMII	CTCAG	2 cut(s)	170, 470
BseRI	GAGGAG	2 cut(s)	196, 598
BseSI	GKGCMC	2 cut(s)	59, 261
BseX3I	CGGCCG	1 cut(s)	64
BseYI	CCCAGC	1 cut(s)	507
BsgI	GTGCAG	2 cut(s)	225, 658
Bsh1236I	CGCG	1 cut(s)	69
Bsh1285I	CGRYCG	1 cut(s)	67
BshFI	GGCC	3 cut(s)	66, 79, 718
BshVI	ATCGAT	1 cut(s)	781
BsiEI	CGRYCG	1 cut(s)	67
BsiHKAI	GWGCWC	1 cut(s)	261
BsiSI	CCGG	1 cut(s)	63
BslI	CCNNNNNNNGG	4 cut(s)	20, 221, 380, 513
BsmAI	GTCTC	2 cut(s)	394, 665
BsnI	GGCC	3 cut(s)	66, 79, 718
Bsp1286I	GDGCHC	2 cut(s)	59, 261
Bsp143I	GATC	4 cut(s)	25, 370, 498, 778
BspACI	CCGC	7 cut(s)	67, 98, 101, 254, 316, 319, 514
BspANI	GGCC	3 cut(s)	66, 79, 718
BspCNI	CTCAG	2 cut(s)	171, 469
BspDI	ATCGAT	1 cut(s)	781
BspFNI	CGCG	1 cut(s)	69
BspLI	GGNNCC	2 cut(s)	166, 699
BspPI	GGATC	1 cut(s)	365
BsrDI	GCAATG	2 cut(s)	28, 450
BssECI	CCNNGG	2 cut(s)	93, 232
BssMI	GATC	4 cut(s)	25, 370, 498, 778
BssT1I	CCWWGG	1 cut(s)	232
Bst4CI	ACNGT	2 cut(s)	136, 470
Bst6I	CTCTTC	2 cut(s)	708, 741
BstAPI	GCANNNNNTGC	1 cut(s)	248
BstC8I	GCNNGC	8 cut(s)	15, 81, 169, 244, 366, 432, 441, 591
BstDEI	CTNAG	2 cut(s)	179, 456
BstF5I	GGATG	2 cut(s)	59, 719
BstFNI	CGCG	1 cut(s)	69
BstHHI	GCGC	3 cut(s)	71, 152, 679
BstKTI	GATC	4 cut(s)	28, 373, 501, 781
BstMAI	GTCTC	2 cut(s)	394, 665
BstMBI	GATC	4 cut(s)	25, 370, 498, 778
BstMCI	CGRYCG	1 cut(s)	67
BstNSI	RCATGY	1 cut(s)	637
BstSLI	GKGCMC	2 cut(s)	59, 261
BstUI	CGCG	1 cut(s)	69
BstZI	CGGCCG	1 cut(s)	64
Bsu15I	ATCGAT	1 cut(s)	781
BsuRI	GGCC	3 cut(s)	66, 79, 718
BsuTUI	ATCGAT	1 cut(s)	781
BtsCI	GGATG	2 cut(s)	59, 719
Cac8I	GCNNGC	8 cut(s)	15, 81, 169, 244, 366, 432, 441, 591
CfoI	GCGC	3 cut(s)	71, 152, 679
Cfr13I	GGNCC	1 cut(s)	697
ClaI	ATCGAT	1 cut(s)	781
Csp6I	GTAC	2 cut(s)	123, 132
CviAII	CATG	5 cut(s)	159, 554, 571, 634, 766
CviQI	GTAC	2 cut(s)	123, 132
DdeI	CTNAG	2 cut(s)	179, 456
DpnI	GATC	4 cut(s)	27, 372, 500, 780
DpnII	GATC	4 cut(s)	25, 370, 498, 778
DraIII	CACNNNGTG	1 cut(s)	265
EaeI	YGGCCR	1 cut(s)	64
EagI	CGGCCG	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	708, 741
EarI	CTCTTC	2 cut(s)	708, 741
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	232
Eco147I	AGGCCT	1 cut(s)	79
Eco47I	GGWCC	1 cut(s)	697
Eco52I	CGGCCG	1 cut(s)	64
Eco57I	CTGAAG	2 cut(s)	479, 689
EcoT14I	CCWWGG	1 cut(s)	232
ErhI	CCWWGG	1 cut(s)	232
FaeI	CATG	5 cut(s)	162, 557, 574, 637, 769
FaiI	YATR	8 cut(s)	160, 206, 348, 381, 555, 572, 635, 767
FalI	AAGNNNNNCTT	4 cut(s)	67, 99, 423, 455
FatI	CATG	5 cut(s)	158, 553, 570, 633, 765
FokI	GGATG	2 cut(s)	46, 706
FspBI	CTAG	2 cut(s)	120, 360
GlaI	GCGC	3 cut(s)	70, 151, 678
GsaI	CCCAGC	1 cut(s)	511
HaeIII	GGCC	3 cut(s)	66, 79, 718
HapII	CCGG	1 cut(s)	63
HhaI	GCGC	3 cut(s)	71, 152, 679
Hin1II	CATG	5 cut(s)	162, 557, 574, 637, 769
Hin6I	GCGC	3 cut(s)	69, 150, 677
HinP1I	GCGC	3 cut(s)	69, 150, 677
HindIII	AAGCTT	2 cut(s)	290, 691
HinfI	GANTC	1 cut(s)	751
HpaII	CCGG	1 cut(s)	63
HphI	GGTGA	2 cut(s)	328, 637
Hpy166II	GTNNAC	1 cut(s)	259
Hpy188I	TCNGA	5 cut(s)	40, 180, 229, 498, 528
Hpy8I	GTNNAC	1 cut(s)	259
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	2 cut(s)	69, 503
HpyCH4III	ACNGT	2 cut(s)	136, 470
HpyF3I	CTNAG	2 cut(s)	179, 456
Hsp92II	CATG	5 cut(s)	162, 557, 574, 637, 769
HspAI	GCGC	3 cut(s)	69, 150, 677
Kzo9I	GATC	4 cut(s)	25, 370, 498, 778
LmnI	GCTCC	4 cut(s)	160, 164, 236, 611
LpnPI	CCDG	9 cut(s)	23, 27, 57, 76, 93, 181, 401, 521, 603
LweI	GCATC	3 cut(s)	316, 431, 532
MaeI	CTAG	2 cut(s)	120, 360
MaeIII	GTNAC	1 cut(s)	334
MalI	GATC	4 cut(s)	27, 372, 500, 780
MboI	GATC	4 cut(s)	25, 370, 498, 778
MboII	GAAGA	6 cut(s)	60, 675, 695, 743, 746, 758
MhlI	GDGCHC	2 cut(s)	59, 261
MluCI	AATT	1 cut(s)	652
MlyI	GAGTC	1 cut(s)	760
MmeI	TCCRAC	1 cut(s)	624
MslI	CAYNNNNRTG	1 cut(s)	632
MspA1I	CMGCKG	3 cut(s)	254, 460, 514
MspI	CCGG	1 cut(s)	63
MvnI	CGCG	1 cut(s)	69
NdeII	GATC	4 cut(s)	25, 370, 498, 778
NlaIII	CATG	5 cut(s)	162, 557, 574, 637, 769
NlaIV	GGNNCC	2 cut(s)	166, 699
NmeAIII	GCCGAG	2 cut(s)	460, 694
NmuCI	GTSAC	1 cut(s)	334
NspI	RCATGY	1 cut(s)	637
PceI	AGGCCT	1 cut(s)	79
PciI	ACATGT	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PleI	GAGTC	1 cut(s)	759
PpsI	GAGTC	1 cut(s)	759
PscI	ACATGT	1 cut(s)	633
PspFI	CCCAGC	1 cut(s)	507
PspN4I	GGNNCC	2 cut(s)	166, 699
PspPI	GGNCC	1 cut(s)	697
PvuII	CAGCTG	1 cut(s)	460
RsaI	GTAC	2 cut(s)	124, 133
RsaNI	GTAC	2 cut(s)	123, 132
RseI	CAYNNNNRTG	1 cut(s)	632
Sau3AI	GATC	4 cut(s)	25, 370, 498, 778
Sau96I	GGNCC	1 cut(s)	697
SchI	GAGTC	1 cut(s)	760
SduI	GDGCHC	2 cut(s)	59, 261
SfaNI	GCATC	3 cut(s)	316, 431, 532
SinI	GGWCC	1 cut(s)	697
SmiMI	CAYNNNNRTG	1 cut(s)	632
SmlI	CTYRAG	1 cut(s)	354
SmoI	CTYRAG	1 cut(s)	354
SpeI	ACTAGT	1 cut(s)	119
Sse9I	AATT	1 cut(s)	652
SseBI	AGGCCT	1 cut(s)	79
SsiI	CCGC	7 cut(s)	67, 98, 101, 254, 316, 319, 514
SspMI	CTAG	2 cut(s)	120, 360
StuI	AGGCCT	1 cut(s)	79
StyI	CCWWGG	1 cut(s)	232
TaaI	ACNGT	2 cut(s)	136, 470
TaqI	TCGA	1 cut(s)	781
TasI	AATT	1 cut(s)	652
TatI	WGTACW	2 cut(s)	122, 131
TauI	GCSGC	5 cut(s)	69, 101, 104, 321, 517
TseFI	GTSAC	1 cut(s)	334
Tsp45I	GTSAC	1 cut(s)	334
VneI	GTGCAC	1 cut(s)	257
VpaK11BI	GGWCC	1 cut(s)	697
XceI	RCATGY	1 cut(s)	637
XspI	CTAG	2 cut(s)	120, 360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.