Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006331

Physical Location & Seq

Genomic Coordinates Reverse (-)

3439830 .. 3446655

Gene Structure 6826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G022300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGCTCCAAACCCTGTATCACTCGCTCGTAAAACCCCTCTCCTAAACCGTTTCGTGGGTTTTTCTCGTAGACCCTCTTTGCATTCTGGTCCTCAGTCTAGGATTGCAGCAAACCCTGTTCAGATAAGGGGCTTTAGAAGCTCTTCTTTGAGCCATTGCCACTCACATGCTCCGCATTCTCATTCATATTGCCTGAATTCTGGCAATGGAGTCGTGTTTAAGGACTTGGGTCGTTCTGAAATAGGTTTTAGGCAGCTGGGTTTTGACCGGTTTCGTCTCTCCGTCGTTTCGGATGGTGGGTCGGGTGGAACTGGTGGATATGGCGGTTCTGGTGATGGAAATTATGGTGGCAGAGGTGAAGGAGGTGCCGGAGATGGTGGTCGTGGTGAAAACAATTGGTCGTTGCTCTCTTGGTATTTGGATCTTCTTGCAAAGTATCCAGTGTCAACAAAAGCTCTTACGTCTGCCTTTTTAACTCTCATTGGAGATGTGATCTGCCAGCTTGTGATTGATAAAACTCCGGACCTGGACTTGAAAAGAACATTCTTGTTTACTCTGTTGGGGCTGGTGTTAGTAGGTCCGACGTTGCATTTCTGGTATTTGTATCTAAGCAAACTGGTAACAACGCCTGGAGCATCAGGTGCATTCCAGCGCCTTCTACTTGATCAGTTTATTTTCTCTCCTATATTCATTGGAGTTTTCTTATCAACATTGATGACACTGGAGGGAAAACCTTCACAAGTTGTACCCAAGCTTCAACAGGAGTGGTTTTCTGCTGTTCTCGCTAATTGGCAACTGTGGATACCTTTCCAGTTTCTTAACTTTCGGTTTGTCCCACAGCAATTCCAGGTCCTTGCTGCTAATTCCATTTCTTTGATATGGAATGTTATCCTCTCGTTTAAAGCTCACAAAGAGGTTCTTCAAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Mpv17_PMP22

Protein Analysis

310

Amino Acids

33.95

Weight (kDa)

9.8

Isoelectric Point (pI)

31.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19750
fragaria_vesca	FvH4_1g28950 FvH4_1g28950 FvH4_1g28950 FvH4_1g28950 FvH4_1g28950 FvH4_1g28950 FvH4_1g28950
malus_domestica	MD12G1111600.v1.1 MD14G1100800.v1.1
prunus_persica	Prupe.7G022300_v2.0.a1 Prupe.7G022300_v2.0.a1 Prupe.7G022300_v2.0.a1 Prupe.7G022300_v2.0.a1 Prupe.7G022300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0494371
rosa_laevigata	RLG00000022675
rosa_multiflora	Rmu_sc0006363.1_g000001 Rmu_sc0006363.1_g000002
rosa_roxburghii	Rroxscaffold_6G00391140
rosa_rugosa	Rorug03G0264800 Rorug03G0264900
rosa_samantha	Rh3AG315300 Rh3BG350500 Rh3CG347200 Rh3DG349800
rosa_wichuraiana	Rw3G027530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	365
AccI	GTMKAC	1 cut(s)	70
AccIII	TCCGGA	1 cut(s)	520
AciI	CCGC	2 cut(s)	173, 324
AclWI	GGATC	1 cut(s)	429
AcsI	RAATTY	1 cut(s)	196
AfaI	GTAC	1 cut(s)	747
AfiI	CCNNNNNNNGG	1 cut(s)	55
AgeI	ACCGGT	1 cut(s)	267
AgsI	TTSAA	3 cut(s)	535, 758, 923
AjnI	CCWGG	3 cut(s)	525, 628, 846
AluBI	AGCT	6 cut(s)	141, 256, 455, 502, 754, 905
AluI	AGCT	6 cut(s)	141, 256, 455, 502, 754, 905
Alw26I	GTCTC	1 cut(s)	281
AlwI	GGATC	1 cut(s)	429
Aor13HI	TCCGGA	1 cut(s)	520
ApeKI	GCWGC	3 cut(s)	107, 253, 857
ApoI	RAATTY	1 cut(s)	196
AsiGI	ACCGGT	1 cut(s)	267
Asp700I	GAANNNNTTC	2 cut(s)	142, 733
AspLEI	GCGC	1 cut(s)	654
AspS9I	GGNCC	4 cut(s)	89, 523, 578, 850
AsuHPI	GGTGA	3 cut(s)	344, 368, 398
AvaII	GGWCC	4 cut(s)	89, 523, 578, 850
BanI	GGYRCC	1 cut(s)	365
BarI	GAAGNNNNNNTAC	2 cut(s)	738, 770
BbvI	GCAGC	3 cut(s)	119, 265, 844
BccI	CCATC	3 cut(s)	287, 329, 368
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	3 cut(s)	527, 630, 848
BciVI	GTATCC	2 cut(s)	447, 795
BclI	TGATCA	1 cut(s)	664
BcoDI	GTCTC	1 cut(s)	281
BfaI	CTAG	1 cut(s)	99
BfoI	RGCGCY	1 cut(s)	655
BfuI	GTATCC	2 cut(s)	447, 795
BisI	GCNGC	3 cut(s)	108, 254, 858
BlsI	GCNGC	3 cut(s)	109, 255, 859
Bme1390I	CCNGG	3 cut(s)	527, 630, 848
Bme18I	GGWCC	4 cut(s)	89, 523, 578, 850
BmgT120I	GGNCC	4 cut(s)	89, 523, 578, 850
BmiI	GGNNCC	2 cut(s)	6, 367
BmrFI	CCNGG	3 cut(s)	527, 630, 848
BmsI	GCATC	1 cut(s)	644
BoxI	GACNNNNGTC	1 cut(s)	228
BpmI	CTGGAG	2 cut(s)	651, 743
BsaWI	WCCGGW	2 cut(s)	267, 520
Bsc4I	CCNNNNNNNGG	1 cut(s)	55
Bse118I	RCCGGY	1 cut(s)	267
Bse1I	ACTGG	5 cut(s)	316, 440, 621, 726, 811
Bse3DI	GCAATG	2 cut(s)	154, 211
BseAI	TCCGGA	1 cut(s)	520
BseBI	CCWGG	3 cut(s)	527, 630, 848
BseGI	GGATG	1 cut(s)	298
BseLI	CCNNNNNNNGG	1 cut(s)	55
BseMI	GCAATG	2 cut(s)	154, 211
BseMII	CTCAG	1 cut(s)	107
BseNI	ACTGG	5 cut(s)	316, 440, 621, 726, 811
BseXI	GCAGC	3 cut(s)	119, 265, 844
BseYI	CCCAGC	1 cut(s)	256
BshNI	GGYRCC	1 cut(s)	365
BshTI	ACCGGT	1 cut(s)	267
BsiSI	CCGG	3 cut(s)	268, 369, 521
BslFI	GGGAC	1 cut(s)	818
BslI	CCNNNNNNNGG	1 cut(s)	55
BsmAI	GTCTC	1 cut(s)	281
BsmBI	CGTCTC	1 cut(s)	281
BsmFI	GGGAC	1 cut(s)	818
BsmI	GAATGC	3 cut(s)	82, 175, 644
Bsp13I	TCCGGA	1 cut(s)	520
Bsp143I	GATC	3 cut(s)	421, 492, 664
BspACI	CCGC	2 cut(s)	173, 324
BspCNI	CTCAG	1 cut(s)	106
BspEI	TCCGGA	1 cut(s)	520
BspLI	GGNNCC	2 cut(s)	6, 367
BspPI	GGATC	1 cut(s)	429
BspQI	GCTCTTC	1 cut(s)	148
BspT107I	GGYRCC	1 cut(s)	365
BsrDI	GCAATG	2 cut(s)	154, 211
BsrFI	RCCGGY	1 cut(s)	267
BsrI	ACTGG	5 cut(s)	316, 440, 621, 726, 811
BssAI	RCCGGY	1 cut(s)	267
BssMI	GATC	3 cut(s)	421, 492, 664
Bst2UI	CCWGG	3 cut(s)	527, 630, 848
Bst4CI	ACNGT	2 cut(s)	50, 798
Bst6I	CTCTTC	1 cut(s)	148
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstC8I	GCNNGC	1 cut(s)	500
BstDEI	CTNAG	2 cut(s)	93, 608
BstF5I	GGATG	1 cut(s)	298
BstH2I	RGCGCY	1 cut(s)	655
BstHHI	GCGC	1 cut(s)	654
BstKTI	GATC	3 cut(s)	424, 495, 667
BstMAI	GTCTC	1 cut(s)	281
BstMBI	GATC	3 cut(s)	421, 492, 664
BstMWI	GCNNNNNNNGC	3 cut(s)	138, 641, 782
BstNI	CCWGG	3 cut(s)	527, 630, 848
BstNSI	RCATGY	1 cut(s)	170
BstPAI	GACNNNNGTC	1 cut(s)	228
BstSCI	CCNGG	3 cut(s)	525, 628, 846
BstV1I	GCAGC	3 cut(s)	119, 265, 844
BstX2I	RGATCY	1 cut(s)	421
BstYI	RGATCY	1 cut(s)	421
BsuI	GTATCC	2 cut(s)	447, 795
BtsCI	GGATG	1 cut(s)	298
BtsIMutI	CAGTG	2 cut(s)	447, 719
Cac8I	GCNNGC	1 cut(s)	500
CfoI	GCGC	1 cut(s)	654
Cfr10I	RCCGGY	1 cut(s)	267
Cfr13I	GGNCC	4 cut(s)	89, 523, 578, 850
Csp6I	GTAC	1 cut(s)	746
CspAI	ACCGGT	1 cut(s)	267
CspCI	CAANNNNNGTGG	2 cut(s)	746, 781
CviAII	CATG	1 cut(s)	167
CviQI	GTAC	1 cut(s)	746
DdeI	CTNAG	2 cut(s)	93, 608
DpnI	GATC	3 cut(s)	423, 494, 666
DpnII	GATC	3 cut(s)	421, 492, 664
DraI	TTTAAA	1 cut(s)	901
Eam1104I	CTCTTC	1 cut(s)	148
EarI	CTCTTC	1 cut(s)	148
Eco47I	GGWCC	4 cut(s)	89, 523, 578, 850
EcoO109I	RGGNCCY	1 cut(s)	850
EcoRI	GAATTC	1 cut(s)	196
EcoRII	CCWGG	3 cut(s)	525, 628, 846
Esp3I	CGTCTC	1 cut(s)	281
FaeI	CATG	1 cut(s)	170
FaiI	YATR	6 cut(s)	168, 187, 321, 345, 686, 880
FalI	AAGNNNNNCTT	3 cut(s)	130, 162, 903
FaqI	GGGAC	1 cut(s)	818
FatI	CATG	1 cut(s)	166
FbaI	TGATCA	1 cut(s)	664
FblI	GTMKAC	1 cut(s)	70
Fnu4HI	GCNGC	3 cut(s)	108, 254, 858
FokI	GGATG	1 cut(s)	305
Fsp4HI	GCNGC	3 cut(s)	108, 254, 858
FspBI	CTAG	1 cut(s)	99
GlaI	GCGC	1 cut(s)	653
GluI	GCNGC	3 cut(s)	108, 254, 858
GsaI	CCCAGC	1 cut(s)	260
GsuI	CTGGAG	2 cut(s)	651, 743
HaeII	RGCGCY	1 cut(s)	655
HapII	CCGG	3 cut(s)	268, 369, 521
HhaI	GCGC	1 cut(s)	654
Hin1II	CATG	1 cut(s)	170
Hin6I	GCGC	1 cut(s)	652
HinP1I	GCGC	1 cut(s)	652
HincII	GTYRAC	1 cut(s)	447
HindII	GTYRAC	1 cut(s)	447
HindIII	AAGCTT	1 cut(s)	752
HinfI	GANTC	1 cut(s)	210
HpaII	CCGG	3 cut(s)	268, 369, 521
HphI	GGTGA	3 cut(s)	344, 368, 398
Hpy166II	GTNNAC	3 cut(s)	71, 447, 552
Hpy188I	TCNGA	4 cut(s)	123, 238, 292, 582
Hpy188III	TCNNGA	1 cut(s)	521
Hpy8I	GTNNAC	3 cut(s)	71, 447, 552
Hpy99I	CGWCG	2 cut(s)	287, 586
HpyAV	CCTTC	3 cut(s)	353, 665, 744
HpyCH4III	ACNGT	2 cut(s)	50, 798
HpyCH4IV	ACGT	2 cut(s)	461, 584
HpyCH4V	TGCA	5 cut(s)	82, 107, 431, 589, 644
HpyF10VI	GCNNNNNNNGC	3 cut(s)	138, 641, 782
HpyF3I	CTNAG	2 cut(s)	93, 608
HpySE526I	ACGT	2 cut(s)	461, 584
Hsp92II	CATG	1 cut(s)	170
HspAI	GCGC	1 cut(s)	652
Kpn2I	TCCGGA	1 cut(s)	520
Ksp22I	TGATCA	1 cut(s)	664
Kzo9I	GATC	3 cut(s)	421, 492, 664
LguI	GCTCTTC	1 cut(s)	148
LmnI	GCTCC	3 cut(s)	10, 175, 632
Lsp1109I	GCAGC	3 cut(s)	119, 265, 844
LweI	GCATC	1 cut(s)	644
MaeI	CTAG	1 cut(s)	99
MaeII	ACGT	2 cut(s)	461, 584
MaeIII	GTNAC	1 cut(s)	619
MalI	GATC	3 cut(s)	423, 494, 666
MboI	GATC	3 cut(s)	421, 492, 664
MboII	GAAGA	3 cut(s)	135, 416, 911
MfeI	CAATTG	1 cut(s)	394
MflI	RGATCY	1 cut(s)	421
MluCI	AATT	6 cut(s)	196, 340, 394, 787, 842, 862
MlyI	GAGTC	1 cut(s)	219
MmeI	TCCRAC	1 cut(s)	605
MnlI	CCTC	8 cut(s)	48, 85, 102, 347, 356, 718, 902, 907
MroI	TCCGGA	1 cut(s)	520
MroXI	GAANNNNTTC	2 cut(s)	142, 733
MseI	TTAA	4 cut(s)	219, 473, 819, 900
MslI	CAYNNNNRTG	1 cut(s)	165
MspA1I	CMGCKG	1 cut(s)	256
MspI	CCGG	3 cut(s)	268, 369, 521
MspR9I	CCNGG	3 cut(s)	527, 630, 848
MunI	CAATTG	1 cut(s)	394
Mva1269I	GAATGC	3 cut(s)	82, 175, 644
MvaI	CCWGG	3 cut(s)	527, 630, 848
MwoI	GCNNNNNNNGC	3 cut(s)	138, 641, 782
NdeII	GATC	3 cut(s)	421, 492, 664
NlaIII	CATG	1 cut(s)	170
NlaIV	GGNNCC	2 cut(s)	6, 367
NspI	RCATGY	1 cut(s)	170
PciSI	GCTCTTC	1 cut(s)	148
PctI	GAATGC	3 cut(s)	82, 175, 644
PdmI	GAANNNNTTC	2 cut(s)	142, 733
PinAI	ACCGGT	1 cut(s)	267
PkrI	GCNGC	3 cut(s)	109, 255, 859
PleI	GAGTC	1 cut(s)	218
PpsI	GAGTC	1 cut(s)	218
PpuMI	RGGWCCY	1 cut(s)	850
PshAI	GACNNNNGTC	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	850
Psp6I	CCWGG	3 cut(s)	525, 628, 846
PspFI	CCCAGC	1 cut(s)	256
PspGI	CCWGG	3 cut(s)	525, 628, 846
PspN4I	GGNNCC	2 cut(s)	6, 367
PspPI	GGNCC	4 cut(s)	89, 523, 578, 850
PspPPI	RGGWCCY	1 cut(s)	850
PsuI	RGATCY	1 cut(s)	421
PvuII	CAGCTG	1 cut(s)	256
RsaI	GTAC	1 cut(s)	747
RsaNI	GTAC	1 cut(s)	746
RseI	CAYNNNNRTG	1 cut(s)	165
SapI	GCTCTTC	1 cut(s)	148
SaqAI	TTAA	4 cut(s)	219, 473, 819, 900
SatI	GCNGC	3 cut(s)	108, 254, 858
Sau3AI	GATC	3 cut(s)	421, 492, 664
Sau96I	GGNCC	4 cut(s)	89, 523, 578, 850
SchI	GAGTC	1 cut(s)	219
ScrFI	CCNGG	3 cut(s)	527, 630, 848
SfaNI	GCATC	1 cut(s)	644
SinI	GGWCC	4 cut(s)	89, 523, 578, 850
SmiMI	CAYNNNNRTG	1 cut(s)	165
Sse9I	AATT	6 cut(s)	196, 340, 394, 787, 842, 862
SsiI	CCGC	2 cut(s)	173, 324
SspMI	CTAG	1 cut(s)	99
StyD4I	CCNGG	3 cut(s)	525, 628, 846
TaaI	ACNGT	2 cut(s)	50, 798
TaiI	ACGT	2 cut(s)	464, 587
TasI	AATT	6 cut(s)	196, 340, 394, 787, 842, 862
Tru1I	TTAA	4 cut(s)	219, 473, 819, 900
Tru9I	TTAA	4 cut(s)	219, 473, 819, 900
TscAI	CASTG	2 cut(s)	447, 726
TseI	GCWGC	3 cut(s)	107, 253, 857
TspDTI	ATGAA	2 cut(s)	174, 679
TspGWI	ACGGA	1 cut(s)	271
TspRI	CASTG	2 cut(s)	447, 726
VpaK11BI	GGWCC	4 cut(s)	89, 523, 578, 850
XapI	RAATTY	1 cut(s)	196
XceI	RCATGY	1 cut(s)	170
XmiI	GTMKAC	1 cut(s)	70
XmnI	GAANNNNTTC	2 cut(s)	142, 733
XspI	CTAG	1 cut(s)	99

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.