Prupe.7G033500_v2.0.a1

Golgin candidate

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
6263934 .. 6265592
1659 bp
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UTR
Exon/CDS
Intron
Prupe.7G033500.1

Sequence Viewer

Length: 303 bp
ATGACTGACCATTTGATTCATAAACAAGCCCAGGTTGAGGCTCTTTTCTCCGAGAAAGCAACTCTTCTGTTCAGAATTGAGGCAGTGTCAAGGTGGCTAGATGAAAGCAAGTCAATGATTGAAATTTCTGGTTCCTCGTCAAGGGACAAAGAATCAGGCAGACCTTTGTTTGAAGACAGGTTCCGTTCAAGCAGGAGGCAAGCTCCAAAAGGAGTTGAATTTGAACAAAAAAAGATTAAAAAACAAATTATATTATACTATACACTTCTCAACCTATCACCCACATTCTCCCCTCCTGGTTAA

Protein Analysis

101

Amino Acids

11.56

Weight (kDa)

9.57

Isoelectric Point (pI)

82.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 123, 218
AfiI CCNNNNNNNGG 2 cut(s) 37, 141
AgsI TTSAA 5 cut(s) 122, 173, 189, 218, 224
AjnI CCWGG 2 cut(s) 30, 295
AluBI AGCT 1 cut(s) 203
AluI AGCT 1 cut(s) 203
ApoI RAATTY 2 cut(s) 123, 218
ArsI GACNNNNNNTTYG 1 cut(s) 27
AsuHPI GGTGA 1 cut(s) 270
BbsI GAAGAC 1 cut(s) 180
BciT130I CCWGG 2 cut(s) 32, 297
BfaI CTAG 1 cut(s) 98
Bme1390I CCNGG 2 cut(s) 32, 297
BmiI GGNNCC 2 cut(s) 133, 182
BmrFI CCNGG 2 cut(s) 32, 297
BpiI GAAGAC 1 cut(s) 180
BplI GAGNNNNNCTC 2 cut(s) 187, 219
BsaJI CCNNGG 1 cut(s) 30
Bsc4I CCNNNNNNNGG 2 cut(s) 37, 141
BseBI CCWGG 2 cut(s) 32, 297
BseDI CCNNGG 1 cut(s) 30
BseLI CCNNNNNNNGG 2 cut(s) 37, 141
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 2 cut(s) 37, 141
BsmFI GGGAC 1 cut(s) 158
BspLI GGNNCC 2 cut(s) 133, 182
BssECI CCNNGG 1 cut(s) 30
Bst2UI CCWGG 2 cut(s) 32, 297
Bst6I CTCTTC 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 201
BstENI CCTNNNNNAGG 1 cut(s) 139
BstNI CCWGG 2 cut(s) 32, 297
BstSCI CCNGG 2 cut(s) 30, 295
BstV2I GAAGAC 1 cut(s) 180
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 90
Cac8I GCNNGC 1 cut(s) 201
CviJI RGCY 4 cut(s) 29, 41, 97, 203
CviKI_1 RGCY 4 cut(s) 29, 41, 97, 203
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
EcoNI CCTNNNNNAGG 1 cut(s) 139
EcoRII CCWGG 2 cut(s) 30, 295
FaiI YATR 4 cut(s) 21, 251, 256, 261
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FaqI GGGAC 1 cut(s) 158
FspBI CTAG 1 cut(s) 98
HinfI GANTC 2 cut(s) 16, 152
HphI GGTGA 1 cut(s) 270
Hpy188I TCNGA 2 cut(s) 52, 74
LmnI GCTCC 1 cut(s) 208
LpnPI CCDG 7 cut(s) 17, 44, 114, 141, 163, 178, 282
MaeI CTAG 1 cut(s) 98
MboII GAAGA 2 cut(s) 56, 185
MluCI AATT 4 cut(s) 75, 123, 218, 246
MnlI CCTC 5 cut(s) 31, 73, 145, 189, 303
MseI TTAA 2 cut(s) 237, 301
MspR9I CCNGG 2 cut(s) 32, 297
MvaI CCWGG 2 cut(s) 32, 297
NlaIV GGNNCC 2 cut(s) 133, 182
PfeI GAWTC 2 cut(s) 16, 152
Psp6I CCWGG 2 cut(s) 30, 295
PspGI CCWGG 2 cut(s) 30, 295
PspN4I GGNNCC 2 cut(s) 133, 182
SaqAI TTAA 2 cut(s) 237, 301
ScrFI CCNGG 2 cut(s) 32, 297
SetI ASST 6 cut(s) 36, 95, 166, 182, 205, 276
Sse9I AATT 4 cut(s) 75, 123, 218, 246
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 2 cut(s) 30, 295
TasI AATT 4 cut(s) 75, 123, 218, 246
TfiI GAWTC 2 cut(s) 16, 152
Tru1I TTAA 2 cut(s) 237, 301
Tru9I TTAA 2 cut(s) 237, 301
TscAI CASTG 1 cut(s) 90
TspDTI ATGAA 2 cut(s) 8, 117
TspGWI ACGGA 1 cut(s) 173
TspRI CASTG 1 cut(s) 90
XagI CCTNNNNNAGG 1 cut(s) 139
XapI RAATTY 2 cut(s) 123, 218
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.