Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007396

Physical Location & Seq

Genomic Coordinates Reverse (-)

1099870 .. 1104270

Gene Structure 4401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGCGAATTGGATCTCCTCCAAACTCAGAGCCGCCGAGACCATCCTCCAACAGATCGATCAGCAAGCGGCGGAGTCGTTACGGAAAAACGAGAAGCCTGTCGCCGACGACGGCTTGAAGTTGGGCGCTCCGGCGAAAACCGGAGGCAGTGTGCCTCTGAAGGATCAGTTGAAGAAGAAAACCCTAGAAAATAGTGATTATAGCGGAAAATTAAGGAGCGATCCGAGCTTTAGCAGTGTTAATAGCAGCAATTATAGTAGTAGCGGTAATGAAAATAGTAGTAGTAATAATAAGGATAAACAGATTGTTGGAAAGGCGAAATCCGAGCCTCTTAGTGATAGTGACTGGACTCAACTTCTCAGTGCACCAAAGCCGGCAGCTGCTACTTCTACATCGAGCCGTGGCAATGGTTTGCACGGGGTTCGGGGTTTGAGGAAGGATGGTAGGAGGCAGGGCAGTGCTGCTTCTGCTTCGAATTTGGAGGTTAAGAAGAATCAGAAGAGTGGGATTGCTAATAATGTTATGAAGTCGGTGCAGAGAGCAGGTGTTGGGGAAGGTAGGAAGTTGAATGGGAGAGTGAGTGATGGGGAGGAGTCTGGTATTCCGGATTCAGCACGGAAGTTTTCCACTGGTGAATTGAAGAGTGATGGTAAGGTTATGGAAGGAGGCGAGTTGGATTATAGGGATGTGGCGGTGGACACTTCGGTTGAAATAAAAGGCAAGGCAAATGAAGAAAAGGGCGGAGCTTTTGATACGAAGGAGCTTTCATTGGAGGGTCGTCTAGAGTCAGTAAAGAAAAATGAAGGGTTGTCTGACAAGAAGATTGGAGGGCAGAGTATGAACAATCAGTTGAGAAGCAGTACTGTCAGGGGTAAGCATGAGTCCAGTGAAGCTGCTAGGAGTTCTACCTCCGAAGACTTCAAGAGAGGTTTTACTTCAGTAACTGATGGCAGCTCTGAGTCTGACTCAGATTCTGGTTCAAGTTCTGATTCTGAAAGTGAGCGTGAGAAGGAGGAAAGGAGAAAGCAGAGACAGAAGATTCTAGCTGAGAAAGCAGCAGCTAAAGCTGTGGAGGCCATTAAAGAGAAGGAAAATACGGTTGCCAGATTGGAAGGGGAGAAGCAGAGCTTGGAGAAAATACTTGAAGTTCAAGTGAAGCAACAAGCACAAGAGGCTTCAAAGCTACAAACGACGATGATGGAAACCATGGAAGCGGCTGATATAGAGAAGCAGAAACATAATAGTACTAGAATGGAAGCCTTTGTGCGTTTGGCTAAACTTGAGACTGCAAATGCTGACCTTGCGAAATCCCTAGCCACTGTGCAGTGGAATCTCGAACAGGAGGTCAATCATGTAGCAGAACTTCGACAGCAAGTTGAGTTAAAAGAAGTTAGCCATGAAGAACTCAGGAGGAAGATCTCTGATACTCATCAGATCGAAATATCTTTAAAGAAAGTAGCGGCTCCAAAAGGACTTGAACTTGAGCGAGAGATTTTGGAGGCAGAGTATGCTATTATAACTGATAAAGTTACACGACTGCAAGATAAGGCAAAGAAGCTGGAAGCAGACATTGAAATGACAAGGAAAGATATAGAGGATCCAACGGATATAGAAATTGAGCTCCATCGAAGACTTTCTCAGATGACTGACCATTTGATTCAGAAACAAGCCCAGGTTGAGGCTCTCTCCTCAGAAAAGGCAACTCTTCAATTCAGAATTGAGGCGGTCTCAAGGTTGCTAGATGAAGGCAAATCAATGACCGAATTTTCTGCTACGTCATCAAGGGACATTGAATCAGGCAGGCCACTATTTGAAGACAGAATCCGTTCAGGCCGGGAGCACCTAGGTTCATTGCTTCAGCAATTGGATTCCATTTTCATGGCCGGAGCAGTGTTTTTAAGGAGGAACACGACTGCAAGATTATGGTCCCTAGTTTACTTTATTTGCCTCCATTTCTGGGTTATTTATATTCTTATGTCCCATTCTCAACCATCAAATGAGATCAAATCTGGGGCAGTGATATCCTTGGAAAACATTAATAACACTTCAGGTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000301 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0031090 GO:0031984 GO:0031985 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048193 GO:0051179 GO:0051234 GO:0071840 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Golgin_A5

Protein Analysis

685

Amino Acids

75.54

Weight (kDa)

6.67

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Golgin_A5	PF09787	446 - 661	2.7e-17	Golgin subfamily A member 5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18190
fragaria_vesca	FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221 FvH4_5g17221
malus_domestica	MD06G1230800.v1.1 MD14G1235400.v1.1
prunus_persica	Prupe.5G232100_v2.0.a1 Prupe.7G033500_v2.0.a1
pyrus_communis	pycom06g20200
rosa_chinensis	RchiOBHm_Chr7g0178571
rosa_laevigata	RLG00000005436 RLG00000013860
rosa_multiflora	Rmu_co8125946.1_g000001 Rmu_sc0012505.1_g000003 Rmu_sc0021447.1_g000002
rosa_roxburghii	Rroxscaffold_3G00274800
rosa_rugosa	Rorug06G0418000
rosa_samantha	Rh5AG530000 Rh7AG016700 Rh7BG016200 Rh7CG016900 Rh7DG016800
rosa_wichuraiana	Rw7G001330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1517
AarI	CACCTGC	1 cut(s)	533
Acc36I	ACCTGC	1 cut(s)	533
AccIII	TCCGGA	1 cut(s)	604
AclWI	GGATC	5 cut(s)	20, 171, 215, 1592, 1605
AcoI	YGGCCR	1 cut(s)	1881
AcsI	RAATTY	2 cut(s)	475, 1763
AcuI	CTGAAG	4 cut(s)	179, 921, 1841, 2031
AfaI	GTAC	2 cut(s)	862, 1246
AfiI	CCNNNNNNNGG	2 cut(s)	1678, 1957
AjnI	CCWGG	1 cut(s)	1671
AjuI	GAANNNNNNNTTGG	2 cut(s)	1112, 1144
Alw21I	GWGCWC	3 cut(s)	367, 1623, 1842
Alw26I	GTCTC	4 cut(s)	32, 1024, 1277, 1732
Alw44I	GTGCAC	1 cut(s)	363
AlwI	GGATC	5 cut(s)	20, 171, 215, 1592, 1605
AlwNI	CAGNNNCTG	2 cut(s)	944, 974
Aor13HI	TCCGGA	1 cut(s)	604
AoxI	GGCC	4 cut(s)	1074, 1802, 1831, 1881
ApaLI	GTGCAC	1 cut(s)	363
ApeKI	GCWGC	8 cut(s)	246, 377, 380, 461, 893, 951, 1055, 1058
ApoI	RAATTY	2 cut(s)	475, 1763
ArsI	GACNNNNNNTTYG	4 cut(s)	1329, 1361, 1636, 1668
AseI	ATTAAT	1 cut(s)	2037
Asp700I	GAANNNNTTC	2 cut(s)	1633, 1825
AspA2I	CCTAGG	1 cut(s)	1843
AspLEI	GCGC	1 cut(s)	128
AspS9I	GGNCC	1 cut(s)	1926
AsuC2I	CCSGG	1 cut(s)	1835
AsuHPI	GGTGA	1 cut(s)	644
AsuII	TTCGAA	1 cut(s)	473
AvaII	GGWCC	1 cut(s)	1926
AvrII	CCTAGG	1 cut(s)	1843
BaeGI	GKGCMC	1 cut(s)	367
BamHI	GGATCC	1 cut(s)	1597
BanII	GRGCYC	1 cut(s)	1623
BarI	GAAGNNNNNNTAC	2 cut(s)	1347, 1379
BbsI	GAAGAC	3 cut(s)	921, 1636, 1821
Bbv12I	GWGCWC	3 cut(s)	367, 1623, 1842
BbvI	GCAGC	8 cut(s)	258, 367, 389, 448, 880, 963, 1067, 1070
BccI	CCATC	8 cut(s)	50, 434, 578, 641, 941, 1192, 1632, 1999
BceAI	ACGGC	2 cut(s)	127, 384
BcgI	CGANNNNNNTGC	4 cut(s)	404, 438, 1751, 1785
BciT130I	CCWGG	1 cut(s)	1673
BcnI	CCSGG	1 cut(s)	1835
BcoDI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BfaI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
BfoI	RGCGCY	1 cut(s)	129
BfuAI	ACCTGC	1 cut(s)	533
BglII	AGATCT	1 cut(s)	1416
BlnI	CCTAGG	1 cut(s)	1843
BmcAI	AGTACT	2 cut(s)	862, 1246
Bme1390I	CCNGG	2 cut(s)	1673, 1835
Bme18I	GGWCC	1 cut(s)	1926
BmgT120I	GGNCC	1 cut(s)	1926
BmiI	GGNNCC	3 cut(s)	1464, 1599, 1928
BmrFI	CCNGG	2 cut(s)	1673, 1835
BpiI	GAAGAC	3 cut(s)	921, 1636, 1821
BplI	GAGNNNNNCTC	6 cut(s)	950, 982, 1670, 1702, 1712, 1744
Bpu14I	TTCGAA	1 cut(s)	473
BpuEI	CTTGAG	3 cut(s)	1301, 1502, 1714
BpuMI	CCSGG	1 cut(s)	1835
Bsa29I	ATCGAT	1 cut(s)	57
BsaBI	GATNNNNATC	1 cut(s)	1428
BsaI	GGTCTC	2 cut(s)	32, 1732
BsaJI	CCNNGG	5 cut(s)	400, 1206, 1671, 1843, 2025
BsaWI	WCCGGW	2 cut(s)	140, 604
BsaXI	ACNNNNNCTCC	6 cut(s)	135, 165, 565, 595, 1490, 1520
Bsc4I	CCNNNNNNNGG	2 cut(s)	1678, 1957
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	3 cut(s)	350, 634, 885
Bse3DI	GCAATG	2 cut(s)	412, 1850
Bse8I	GATNNNNATC	1 cut(s)	1428
BseAI	TCCGGA	1 cut(s)	604
BseBI	CCWGG	1 cut(s)	1673
BseCI	ATCGAT	1 cut(s)	57
BseDI	CCNNGG	5 cut(s)	400, 1206, 1671, 1843, 2025
BseGI	GGATG	3 cut(s)	42, 445, 691
BseJI	GATNNNNATC	1 cut(s)	1428
BseLI	CCNNNNNNNGG	2 cut(s)	1678, 1957
BseMI	GCAATG	2 cut(s)	412, 1850
BseMII	CTCAG	8 cut(s)	40, 373, 948, 981, 1038, 1420, 1652, 1704
BseNI	ACTGG	3 cut(s)	350, 634, 885
BseRI	GAGGAG	3 cut(s)	7, 605, 1678
BseSI	GKGCMC	1 cut(s)	367
BseXI	GCAGC	8 cut(s)	258, 367, 389, 448, 880, 963, 1067, 1070
BsgI	GTGCAG	2 cut(s)	554, 1343
BshFI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BshVI	ATCGAT	1 cut(s)	57
BsiHKAI	GWGCWC	3 cut(s)	367, 1623, 1842
BsiSI	CCGG	6 cut(s)	131, 141, 374, 605, 1834, 1884
BslFI	GGGAC	3 cut(s)	1799, 1912, 1963
BslI	CCNNNNNNNGG	2 cut(s)	1678, 1957
BsmAI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BsmFI	GGGAC	3 cut(s)	1799, 1912, 1963
BsnI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
Bso31I	GGTCTC	2 cut(s)	32, 1732
Bsp119I	TTCGAA	1 cut(s)	473
Bsp1286I	GDGCHC	3 cut(s)	367, 1623, 1842
Bsp13I	TCCGGA	1 cut(s)	604
Bsp143I	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
Bsp19I	CCATGG	1 cut(s)	1206
BspANI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BspCNI	CTCAG	8 cut(s)	39, 372, 949, 980, 1039, 1419, 1651, 1703
BspDI	ATCGAT	1 cut(s)	57
BspEI	TCCGGA	1 cut(s)	604
BspLI	GGNNCC	3 cut(s)	1464, 1599, 1928
BspMI	ACCTGC	1 cut(s)	533
BspPI	GGATC	5 cut(s)	20, 171, 215, 1592, 1605
BspT104I	TTCGAA	1 cut(s)	473
BspTNI	GGTCTC	2 cut(s)	32, 1732
BsrDI	GCAATG	2 cut(s)	412, 1850
BsrFI	RCCGGY	1 cut(s)	373
BsrI	ACTGG	3 cut(s)	350, 634, 885
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	5 cut(s)	400, 1206, 1671, 1843, 2025
BssMI	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
BssT1I	CCWWGG	3 cut(s)	1206, 1843, 2025
Bst2UI	CCWGG	1 cut(s)	1673
Bst4CI	ACNGT	3 cut(s)	865, 1099, 1321
Bst6I	CTCTTC	3 cut(s)	494, 635, 1710
BstAPI	GCANNNNNTGC	1 cut(s)	1508
BstBI	TTCGAA	1 cut(s)	473
BstC8I	GCNNGC	3 cut(s)	66, 375, 1802
BstDEI	CTNAG	9 cut(s)	26, 332, 359, 957, 967, 1047, 1406, 1638, 1690
BstDSI	CCRYGG	2 cut(s)	400, 1206
BstF5I	GGATG	3 cut(s)	42, 445, 691
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	1 cut(s)	128
BstKTI	GATC	9 cut(s)	15, 57, 61, 166, 223, 1419, 1437, 1600, 2004
BstMAI	GTCTC	4 cut(s)	32, 1024, 1277, 1732
BstMBI	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
BstMWI	GCNNNNNNNGC	8 cut(s)	225, 467, 1052, 1064, 1073, 1172, 1301, 1508
BstNI	CCWGG	1 cut(s)	1673
BstSCI	CCNGG	2 cut(s)	1671, 1833
BstSLI	GKGCMC	1 cut(s)	367
BstV1I	GCAGC	8 cut(s)	258, 367, 389, 448, 880, 963, 1067, 1070
BstV2I	GAAGAC	3 cut(s)	921, 1636, 1821
BstX2I	RGATCY	3 cut(s)	12, 1416, 1597
BstXI	CCANNNNNNTGG	1 cut(s)	1879
BstYI	RGATCY	3 cut(s)	12, 1416, 1597
Bsu15I	ATCGAT	1 cut(s)	57
BsuRI	GGCC	4 cut(s)	1076, 1804, 1833, 1883
BsuTUI	ATCGAT	1 cut(s)	57
BtgI	CCRYGG	2 cut(s)	400, 1206
BtsCI	GGATG	3 cut(s)	42, 445, 691
BtsI	GCAGTG	6 cut(s)	154, 241, 463, 1331, 1896, 2022
BveI	ACCTGC	1 cut(s)	533
Cac8I	GCNNGC	3 cut(s)	66, 375, 1802
CaiI	CAGNNNCTG	2 cut(s)	944, 974
CfoI	GCGC	1 cut(s)	128
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	1 cut(s)	1926
ClaI	ATCGAT	1 cut(s)	57
Csp6I	GTAC	2 cut(s)	861, 1245
CviAII	CATG	5 cut(s)	878, 1207, 1352, 1397, 1879
CviQI	GTAC	2 cut(s)	861, 1245
DdeI	CTNAG	9 cut(s)	26, 332, 359, 957, 967, 1047, 1406, 1638, 1690
DpnI	GATC	9 cut(s)	14, 56, 60, 165, 222, 1418, 1436, 1599, 2003
DpnII	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
DraI	TTTAAA	1 cut(s)	1449
EaeI	YGGCCR	1 cut(s)	1881
Eam1104I	CTCTTC	3 cut(s)	494, 635, 1710
EarI	CTCTTC	3 cut(s)	494, 635, 1710
EciI	GGCGGA	2 cut(s)	86, 756
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	3 cut(s)	1206, 1843, 2025
Eco24I	GRGCYC	1 cut(s)	1623
Eco31I	GGTCTC	2 cut(s)	32, 1732
Eco32I	GATATC	1 cut(s)	2022
Eco47I	GGWCC	1 cut(s)	1926
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	4 cut(s)	179, 921, 1841, 2031
EcoICRI	GAGCTC	1 cut(s)	1621
EcoRII	CCWGG	1 cut(s)	1671
EcoRV	GATATC	1 cut(s)	2022
EcoT14I	CCWWGG	3 cut(s)	1206, 1843, 2025
EcoT38I	GRGCYC	1 cut(s)	1623
ErhI	CCWWGG	3 cut(s)	1206, 1843, 2025
FaeI	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
FalI	AAGNNNNNCTT	2 cut(s)	1112, 1144
FaqI	GGGAC	3 cut(s)	1799, 1912, 1963
FatI	CATG	5 cut(s)	877, 1206, 1351, 1396, 1878
FokI	GGATG	3 cut(s)	29, 452, 698
FriOI	GRGCYC	1 cut(s)	1623
FspBI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
GlaI	GCGC	1 cut(s)	127
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	4 cut(s)	1076, 1804, 1833, 1883
HapII	CCGG	6 cut(s)	131, 141, 374, 605, 1834, 1884
HhaI	GCGC	1 cut(s)	128
Hin1II	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
Hin6I	GCGC	1 cut(s)	126
HinP1I	GCGC	1 cut(s)	126
HpaII	CCGG	6 cut(s)	131, 141, 374, 605, 1834, 1884
HphI	GGTGA	1 cut(s)	644
Hpy166II	GTNNAC	3 cut(s)	365, 697, 1936
Hpy188III	TCNNGA	5 cut(s)	605, 782, 922, 1334, 1408
Hpy8I	GTNNAC	3 cut(s)	365, 697, 1936
Hpy99I	CGWCG	3 cut(s)	110, 113, 1195
HpyCH4III	ACNGT	3 cut(s)	865, 1099, 1321
HpyCH4IV	ACGT	1 cut(s)	1775
HpyCH4V	TGCA	7 cut(s)	365, 415, 535, 1289, 1324, 1540, 1916
HpyF10VI	GCNNNNNNNGC	8 cut(s)	225, 467, 1052, 1064, 1073, 1172, 1301, 1508
HpyF3I	CTNAG	9 cut(s)	26, 332, 359, 957, 967, 1047, 1406, 1638, 1690
HpySE526I	ACGT	1 cut(s)	1775
Hsp92II	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
HspAI	GCGC	1 cut(s)	126
Kpn2I	TCCGGA	1 cut(s)	604
KroI	GCCGGC	1 cut(s)	373
KroNI	GCCGGC	1 cut(s)	375
Kzo9I	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
LmnI	GCTCC	8 cut(s)	133, 216, 743, 760, 1468, 1626, 1837, 1886
Lsp1109I	GCAGC	8 cut(s)	258, 367, 389, 448, 880, 963, 1067, 1070
MaeI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
MaeII	ACGT	1 cut(s)	1775
MaeIII	GTNAC	4 cut(s)	78, 341, 940, 1528
MalI	GATC	9 cut(s)	14, 56, 60, 165, 222, 1418, 1436, 1599, 2003
MboI	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
MfeI	CAATTG	1 cut(s)	1862
MflI	RGATCY	3 cut(s)	12, 1416, 1597
MhlI	GDGCHC	3 cut(s)	367, 1623, 1842
MlyI	GAGTC	7 cut(s)	83, 343, 602, 794, 890, 959, 968
MmeI	TCCRAC	4 cut(s)	73, 289, 654, 1625
MroI	TCCGGA	1 cut(s)	604
MroNI	GCCGGC	1 cut(s)	373
MroXI	GAANNNNTTC	2 cut(s)	1633, 1825
MseI	TTAA	8 cut(s)	212, 240, 486, 1080, 1382, 1448, 1898, 2037
MslI	CAYNNNNRTG	2 cut(s)	1574, 1877
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	6 cut(s)	131, 141, 374, 605, 1834, 1884
MspR9I	CCNGG	2 cut(s)	1673, 1835
MunI	CAATTG	1 cut(s)	1862
MvaI	CCWGG	1 cut(s)	1673
MwoI	GCNNNNNNNGC	8 cut(s)	225, 467, 1052, 1064, 1073, 1172, 1301, 1508
NaeI	GCCGGC	1 cut(s)	375
NciI	CCSGG	1 cut(s)	1835
NcoI	CCATGG	1 cut(s)	1206
NdeII	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
NgoMIV	GCCGGC	1 cut(s)	373
NlaIII	CATG	5 cut(s)	881, 1210, 1355, 1400, 1882
NlaIV	GGNNCC	3 cut(s)	1464, 1599, 1928
NmeAIII	GCCGAG	1 cut(s)	61
NmuCI	GTSAC	1 cut(s)	341
NspV	TTCGAA	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	533
PdiI	GCCGGC	1 cut(s)	375
PdmI	GAANNNNTTC	2 cut(s)	1633, 1825
PleI	GAGTC	7 cut(s)	82, 343, 601, 793, 889, 959, 967
PpsI	GAGTC	7 cut(s)	82, 343, 601, 793, 889, 959, 967
PshBI	ATTAAT	1 cut(s)	2037
PsiI	TTATAA	1 cut(s)	1517
Psp124BI	GAGCTC	1 cut(s)	1623
Psp6I	CCWGG	1 cut(s)	1671
PspGI	CCWGG	1 cut(s)	1671
PspN4I	GGNNCC	3 cut(s)	1464, 1599, 1928
PspPI	GGNCC	1 cut(s)	1926
PstNI	CAGNNNCTG	2 cut(s)	944, 974
PsuI	RGATCY	3 cut(s)	12, 1416, 1597
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	2 cut(s)	862, 1246
RsaNI	GTAC	2 cut(s)	861, 1245
RseI	CAYNNNNRTG	2 cut(s)	1574, 1877
SacI	GAGCTC	1 cut(s)	1623
SaqAI	TTAA	8 cut(s)	212, 240, 486, 1080, 1382, 1448, 1898, 2037
Sau3AI	GATC	9 cut(s)	12, 54, 58, 163, 220, 1416, 1434, 1597, 2001
Sau96I	GGNCC	1 cut(s)	1926
ScaI	AGTACT	2 cut(s)	862, 1246
SchI	GAGTC	7 cut(s)	83, 343, 602, 794, 890, 959, 968
ScrFI	CCNGG	2 cut(s)	1673, 1835
SduI	GDGCHC	3 cut(s)	367, 1623, 1842
SfuI	TTCGAA	1 cut(s)	473
SinI	GGWCC	1 cut(s)	1926
SmiMI	CAYNNNNRTG	2 cut(s)	1574, 1877
SmlI	CTYRAG	3 cut(s)	1280, 1481, 1729
SmoI	CTYRAG	3 cut(s)	1280, 1481, 1729
SspMI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
SstI	GAGCTC	1 cut(s)	1623
StyD4I	CCNGG	2 cut(s)	1671, 1833
StyI	CCWWGG	3 cut(s)	1206, 1843, 2025
TaaI	ACNGT	3 cut(s)	865, 1099, 1321
TaiI	ACGT	1 cut(s)	1778
TaqI	TCGA	7 cut(s)	57, 395, 473, 1335, 1366, 1437, 1627
TaqII	GACCGA	1 cut(s)	1775
TatI	WGTACW	2 cut(s)	860, 1244
TauI	GCSGC	4 cut(s)	35, 71, 1217, 1463
Tru1I	TTAA	8 cut(s)	212, 240, 486, 1080, 1382, 1448, 1898, 2037
Tru9I	TTAA	8 cut(s)	212, 240, 486, 1080, 1382, 1448, 1898, 2037
TseFI	GTSAC	1 cut(s)	341
TseI	GCWGC	8 cut(s)	246, 377, 380, 461, 893, 951, 1055, 1058
Tsp45I	GTSAC	1 cut(s)	341
TspGWI	ACGGA	4 cut(s)	97, 631, 1619, 1814
VneI	GTGCAC	1 cut(s)	363
VpaK11BI	GGWCC	1 cut(s)	1926
VspI	ATTAAT	1 cut(s)	2037
XapI	RAATTY	2 cut(s)	475, 1763
XbaI	TCTAGA	1 cut(s)	781
XmaJI	CCTAGG	1 cut(s)	1843
XmnI	GAANNNNTTC	2 cut(s)	1633, 1825
XspI	CTAG	9 cut(s)	185, 782, 897, 1043, 1248, 1313, 1739, 1844, 1931
ZrmI	AGTACT	2 cut(s)	862, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.