Rh5AG530000

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
91144669 .. 91144935
267 bp
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UTR
Exon/CDS
Intron
Rh5AG530000.1

Sequence Viewer

Length: 267 bp
ATGAAGTCGGTGCAGAGGGCAGGTGTTGGGGAAGGTAGGAAGTTGAATGGGAGAGTGAGTGATGGGGAGGAGTCTGGTATTCTGGATTCAGCATGGAGGTTTTCCACTGGTGAATTGAAGAGTGATGGTAAGGTTATGGAAGGAGGTGAGTTGGATTATAGGGATGTGGCAGTGGACACTTCGGTTGAAATAAAAGGTAAGGCAAATGAAGAAAAGGGCGGAGCTTTTGATACGAAGGAGCTTTCATTGGAGGGTCGTCTAGAGTGA

Protein Analysis

88

Amino Acids

9.46

Weight (kDa)

4.83

Isoelectric Point (pI)

6.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 11
Acc36I ACCTGC 1 cut(s) 11
AciI CCGC 1 cut(s) 219
AgsI TTSAA 3 cut(s) 46, 118, 188
AluBI AGCT 2 cut(s) 224, 241
AluI AGCT 2 cut(s) 224, 241
AsuHPI GGTGA 2 cut(s) 122, 158
BccI CCATC 2 cut(s) 56, 119
BfaI CTAG 1 cut(s) 260
BfuAI ACCTGC 1 cut(s) 11
BsaXI ACNNNNNCTCC 2 cut(s) 43, 73
Bse1I ACTGG 1 cut(s) 112
BseGI GGATG 1 cut(s) 169
BseNI ACTGG 1 cut(s) 112
BseRI GAGGAG 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 32
BspACI CCGC 1 cut(s) 219
BspMI ACCTGC 1 cut(s) 11
BsrI ACTGG 1 cut(s) 112
Bst6I CTCTTC 1 cut(s) 113
BstF5I GGATG 1 cut(s) 169
BtsCI GGATG 1 cut(s) 169
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 2 cut(s) 105, 177
BveI ACCTGC 1 cut(s) 11
CviAII CATG 1 cut(s) 93
CviJI RGCY 2 cut(s) 224, 241
CviKI_1 RGCY 2 cut(s) 224, 241
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 1 cut(s) 234
FaeI CATG 1 cut(s) 96
FaiI YATR 3 cut(s) 94, 137, 159
FatI CATG 1 cut(s) 92
FokI GGATG 1 cut(s) 176
FspBI CTAG 1 cut(s) 260
Hin1II CATG 1 cut(s) 96
HinfI GANTC 2 cut(s) 71, 86
HphI GGTGA 2 cut(s) 122, 158
Hpy166II GTNNAC 1 cut(s) 175
Hpy188III TCNNGA 2 cut(s) 83, 260
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 3 cut(s) 26, 134, 229
HpyCH4V TGCA 1 cut(s) 13
Hsp92II CATG 1 cut(s) 96
LmnI GCTCC 2 cut(s) 221, 238
LpnPI CCDG 4 cut(s) 6, 60, 68, 93
MaeI CTAG 1 cut(s) 260
MboII GAAGA 2 cut(s) 130, 221
MluCI AATT 1 cut(s) 113
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 1 cut(s) 132
MnlI CCTC 5 cut(s) 9, 61, 90, 137, 244
NlaIII CATG 1 cut(s) 96
PaqCI CACCTGC 1 cut(s) 11
PfeI GAWTC 1 cut(s) 86
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
SchI GAGTC 1 cut(s) 80
SetI ASST 8 cut(s) 25, 37, 101, 135, 148, 199, 226, 243
SgeI CNNG 5 cut(s) 33, 87, 95, 105, 120
Sse9I AATT 1 cut(s) 113
SsiI CCGC 1 cut(s) 219
SspMI CTAG 1 cut(s) 260
TasI AATT 1 cut(s) 113
TfiI GAWTC 1 cut(s) 86
TscAI CASTG 2 cut(s) 112, 177
TspDTI ATGAA 3 cut(s) 17, 222, 234
TspRI CASTG 2 cut(s) 112, 177
XbaI TCTAGA 1 cut(s) 259
XspI CTAG 1 cut(s) 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.